View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4530-Insertion-5 (Length: 684)

Name: NF4530-Insertion-5
Description: NF4530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4530-Insertion-5
NF4530-Insertion-5
[»] chr4 (31 HSPs)
chr4 (8-684)||(50579-51242)
chr4 (295-358)||(29399000-29399063)
chr4 (296-382)||(53540487-53540573)
chr4 (295-343)||(12443291-12443339)
chr4 (295-363)||(13805283-13805351)
chr4 (302-370)||(35690474-35690542)
chr4 (150-226)||(33709940-33710018)
chr4 (298-381)||(36799657-36799740)
chr4 (295-382)||(55007942-55008029)
chr4 (296-382)||(20601651-20601737)
chr4 (295-341)||(30621241-30621287)
chr4 (295-361)||(56439591-56439657)
chr4 (296-365)||(31043269-31043338)
chr4 (298-343)||(54935348-54935393)
chr4 (296-356)||(20131014-20131074)
chr4 (296-364)||(26037522-26037590)
chr4 (295-347)||(28277436-28277488)
chr4 (295-382)||(25575020-25575107)
chr4 (295-354)||(34379599-34379657)
chr4 (299-358)||(51176774-51176833)
chr4 (295-382)||(51438641-51438728)
chr4 (296-382)||(436426-436512)
chr4 (296-382)||(19154862-19154948)
chr4 (296-382)||(28236379-28236465)
chr4 (296-358)||(34233047-34233109)
chr4 (296-370)||(39708630-39708704)
chr4 (295-383)||(2557669-2557758)
chr4 (296-381)||(23906297-23906382)
chr4 (150-228)||(46715558-46715638)
chr4 (290-346)||(7681945-7682001)
chr4 (150-186)||(49987444-49987480)
[»] chr5 (34 HSPs)
chr5 (296-382)||(18855804-18855890)
chr5 (296-385)||(5558338-5558427)
chr5 (295-364)||(9235243-9235311)
chr5 (146-228)||(30588461-30588545)
chr5 (296-364)||(6859578-6859646)
chr5 (150-255)||(42199302-42199409)
chr5 (295-357)||(6788263-6788325)
chr5 (296-364)||(32442142-32442210)
chr5 (291-383)||(38684672-38684764)
chr5 (291-358)||(21193675-21193742)
chr5 (295-358)||(38830516-38830578)
chr5 (301-358)||(28985285-28985342)
chr5 (150-256)||(43475256-43475364)
chr5 (295-364)||(43557850-43557919)
chr5 (295-387)||(7359255-7359346)
chr5 (299-375)||(14667971-14668047)
chr5 (154-247)||(21093772-21093867)
chr5 (296-364)||(38685164-38685232)
chr5 (290-358)||(41108752-41108820)
chr5 (296-363)||(418052-418119)
chr5 (296-370)||(28079-28153)
chr5 (296-382)||(4496581-4496667)
chr5 (300-382)||(5860035-5860117)
chr5 (296-346)||(6889190-6889240)
chr5 (296-382)||(11675727-11675813)
chr5 (306-376)||(20456980-20457050)
chr5 (296-382)||(28976858-28976944)
chr5 (146-184)||(29938127-29938165)
chr5 (291-365)||(35615475-35615548)
chr5 (305-383)||(38132542-38132620)
chr5 (295-364)||(30588643-30588712)
chr5 (150-195)||(38341638-38341683)
chr5 (146-187)||(43558056-43558097)
chr5 (330-382)||(7678708-7678760)
[»] chr6 (16 HSPs)
chr6 (295-382)||(34504-34591)
chr6 (296-382)||(12890772-12890858)
chr6 (296-381)||(9706967-9707052)
chr6 (296-365)||(32097934-32098003)
chr6 (150-227)||(2079356-2079435)
chr6 (296-364)||(5096031-5096099)
chr6 (295-363)||(7513008-7513076)
chr6 (296-340)||(26291974-26292018)
chr6 (296-364)||(30031453-30031521)
chr6 (291-382)||(586042-586133)
chr6 (295-358)||(2079477-2079540)
chr6 (295-358)||(8364752-8364815)
chr6 (150-250)||(9593870-9593972)
chr6 (299-381)||(31818731-31818813)
chr6 (150-187)||(4948540-4948577)
chr6 (150-187)||(4955511-4955548)
[»] chr8 (34 HSPs)
chr8 (296-381)||(35914601-35914686)
chr8 (296-382)||(490532-490618)
chr8 (295-365)||(16035743-16035813)
chr8 (295-358)||(32931156-32931219)
chr8 (296-382)||(42584556-42584641)
chr8 (305-382)||(27556301-27556378)
chr8 (150-227)||(2518579-2518658)
chr8 (297-364)||(45041333-45041400)
chr8 (295-357)||(2518422-2518484)
chr8 (296-382)||(14903758-14903844)
chr8 (296-381)||(29520846-29520931)
chr8 (296-381)||(44529422-44529507)
chr8 (296-381)||(45419432-45419517)
chr8 (150-255)||(16917200-16917306)
chr8 (295-358)||(21425242-21425305)
chr8 (296-383)||(25473401-25473488)
chr8 (296-343)||(43904703-43904750)
chr8 (150-192)||(12611551-12611593)
chr8 (303-357)||(29700480-29700534)
chr8 (309-383)||(35320398-35320472)
chr8 (296-382)||(42469726-42469812)
chr8 (296-382)||(44047531-44047617)
chr8 (309-382)||(1928586-1928659)
chr8 (303-364)||(2216490-2216551)
chr8 (296-382)||(8255530-8255618)
chr8 (150-228)||(9695647-9695727)
chr8 (297-358)||(21121344-21121404)
chr8 (296-364)||(2796750-2796818)
chr8 (150-190)||(10824390-10824430)
chr8 (330-382)||(31309584-31309636)
chr8 (330-382)||(39953263-39953315)
chr8 (150-186)||(41444556-41444592)
chr8 (150-255)||(41971937-41972044)
chr8 (330-382)||(45317576-45317628)
[»] chr7 (36 HSPs)
chr7 (295-382)||(27893562-27893649)
chr7 (150-255)||(1740817-1740924)
chr7 (296-364)||(9210721-9210789)
chr7 (296-364)||(28627950-28628018)
chr7 (150-246)||(47848690-47848788)
chr7 (296-382)||(36101776-36101862)
chr7 (296-381)||(40979928-40980013)
chr7 (296-364)||(42969895-42969963)
chr7 (296-382)||(2885721-2885807)
chr7 (296-382)||(28208327-28208413)
chr7 (146-192)||(42187482-42187528)
chr7 (296-382)||(47652744-47652830)
chr7 (297-382)||(25891086-25891171)
chr7 (297-357)||(33103124-33103184)
chr7 (146-247)||(36101932-36102035)
chr7 (296-364)||(45836499-45836567)
chr7 (297-384)||(1011244-1011331)
chr7 (296-383)||(7273297-7273384)
chr7 (296-383)||(27648977-27649064)
chr7 (150-250)||(28628097-28628199)
chr7 (295-358)||(30814148-30814211)
chr7 (152-236)||(35713713-35713799)
chr7 (150-197)||(40169665-40169712)
chr7 (296-382)||(12841274-12841360)
chr7 (263-321)||(23720970-23721028)
chr7 (151-250)||(25579241-25579342)
chr7 (298-364)||(48515370-48515436)
chr7 (296-357)||(14057675-14057736)
chr7 (296-357)||(14367703-14367764)
chr7 (150-228)||(28020980-28021060)
chr7 (301-382)||(31682601-31682682)
chr7 (148-197)||(41948530-41948579)
chr7 (159-228)||(6420676-6420747)
chr7 (290-381)||(33732025-33732114)
chr7 (301-364)||(42187642-42187706)
chr7 (330-374)||(47155179-47155223)
[»] chr1 (51 HSPs)
chr1 (296-382)||(28090693-28090779)
chr1 (150-246)||(48431574-48431672)
chr1 (296-382)||(19936657-19936743)
chr1 (296-358)||(52532639-52532701)
chr1 (295-358)||(2544789-2544852)
chr1 (295-382)||(8796405-8796492)
chr1 (299-382)||(41017216-41017298)
chr1 (296-382)||(11584194-11584280)
chr1 (296-382)||(41560426-41560512)
chr1 (149-255)||(14225988-14226096)
chr1 (296-381)||(21769711-21769796)
chr1 (306-382)||(1704834-1704910)
chr1 (296-376)||(19908040-19908120)
chr1 (296-364)||(22175342-22175410)
chr1 (296-364)||(37462893-37462961)
chr1 (296-364)||(39140712-39140780)
chr1 (291-382)||(6025797-6025888)
chr1 (295-381)||(25715326-25715412)
chr1 (296-382)||(25979230-25979316)
chr1 (296-382)||(38807670-38807756)
chr1 (296-382)||(44941775-44941861)
chr1 (296-358)||(50846759-50846821)
chr1 (296-353)||(1290059-1290116)
chr1 (150-228)||(13827756-13827836)
chr1 (294-343)||(27072525-27072574)
chr1 (297-370)||(45510844-45510917)
chr1 (296-381)||(52921277-52921362)
chr1 (290-382)||(31274400-31274492)
chr1 (150-186)||(35828780-35828816)
chr1 (150-247)||(40416387-40416486)
chr1 (296-356)||(48801639-48801698)
chr1 (296-364)||(50257767-50257835)
chr1 (150-185)||(13827948-13827983)
chr1 (299-382)||(26113438-26113521)
chr1 (300-363)||(28511819-28511882)
chr1 (303-358)||(37294131-37294186)
chr1 (295-382)||(43375597-43375684)
chr1 (296-382)||(4707220-4707305)
chr1 (153-228)||(32404712-32404789)
chr1 (296-382)||(39318326-39318411)
chr1 (296-382)||(41612003-41612087)
chr1 (330-376)||(43599010-43599056)
chr1 (298-347)||(9599428-9599477)
chr1 (296-381)||(40568410-40568495)
chr1 (150-216)||(43423735-43423803)
chr1 (146-228)||(46388388-46388472)
chr1 (150-239)||(3819031-3819122)
chr1 (300-364)||(32404543-32404607)
chr1 (294-358)||(36339827-36339891)
chr1 (149-197)||(38868897-38868945)
chr1 (296-384)||(51440762-51440850)
[»] chr3 (38 HSPs)
chr3 (297-382)||(45486848-45486933)
chr3 (300-381)||(48734147-48734228)
chr3 (296-370)||(40991628-40991702)
chr3 (296-382)||(54128576-54128662)
chr3 (291-376)||(32170597-32170682)
chr3 (296-381)||(45289091-45289176)
chr3 (150-279)||(21200564-21200695)
chr3 (298-381)||(14415260-14415342)
chr3 (296-382)||(48508432-48508518)
chr3 (295-352)||(49841812-49841869)
chr3 (296-364)||(52927865-52927933)
chr3 (297-364)||(19758085-19758151)
chr3 (296-373)||(24541340-24541417)
chr3 (296-381)||(38060911-38060996)
chr3 (296-381)||(40106620-40106705)
chr3 (150-247)||(42510183-42510280)
chr3 (303-375)||(40122618-40122690)
chr3 (150-247)||(41842678-41842777)
chr3 (290-370)||(42026547-42026627)
chr3 (296-356)||(42510041-42510101)
chr3 (297-364)||(19737182-19737248)
chr3 (296-363)||(29601089-29601156)
chr3 (299-382)||(45374476-45374559)
chr3 (303-358)||(46148232-46148287)
chr3 (296-382)||(22269-22355)
chr3 (296-382)||(5169029-5169115)
chr3 (296-382)||(19676080-19676166)
chr3 (150-245)||(45289260-45289357)
chr3 (148-197)||(11581458-11581507)
chr3 (296-381)||(25191574-25191659)
chr3 (296-353)||(36304163-36304220)
chr3 (296-369)||(38850318-38850391)
chr3 (295-364)||(40116355-40116424)
chr3 (174-255)||(46431834-46431915)
chr3 (296-381)||(47233596-47233681)
chr3 (150-247)||(39600848-39600947)
chr3 (296-364)||(52156101-52156169)
chr3 (150-198)||(54128394-54128442)
[»] chr2 (40 HSPs)
chr2 (296-364)||(18959108-18959176)
chr2 (297-382)||(19863432-19863517)
chr2 (297-382)||(19867764-19867849)
chr2 (297-382)||(19872665-19872750)
chr2 (294-357)||(3481349-3481412)
chr2 (296-382)||(9531599-9531685)
chr2 (300-381)||(17429251-17429332)
chr2 (296-357)||(31959718-31959779)
chr2 (301-382)||(42549836-42549917)
chr2 (295-376)||(45077925-45078006)
chr2 (290-382)||(33287612-33287704)
chr2 (291-338)||(42149703-42149750)
chr2 (296-358)||(9496063-9496125)
chr2 (149-247)||(3481156-3481256)
chr2 (297-382)||(12520061-12520146)
chr2 (150-228)||(13240931-13241011)
chr2 (295-376)||(19336898-19336979)
chr2 (295-364)||(33504420-33504489)
chr2 (298-358)||(9556392-9556452)
chr2 (306-370)||(41778624-41778688)
chr2 (296-364)||(45543090-45543158)
chr2 (307-370)||(440924-440987)
chr2 (295-358)||(3720438-3720501)
chr2 (150-250)||(12141560-12141662)
chr2 (296-383)||(28508875-28508962)
chr2 (296-363)||(39709219-39709286)
chr2 (296-382)||(3635322-3635408)
chr2 (296-358)||(11992131-11992193)
chr2 (296-382)||(12734897-12734983)
chr2 (296-382)||(25834875-25834961)
chr2 (296-382)||(30306229-30306315)
chr2 (296-358)||(32443833-32443895)
chr2 (296-358)||(36650639-36650701)
chr2 (298-343)||(34931631-34931676)
chr2 (308-364)||(887082-887138)
chr2 (295-343)||(6219161-6219209)
chr2 (296-356)||(9996651-9996711)
chr2 (297-381)||(13474214-13474298)
chr2 (150-186)||(18958923-18958959)
chr2 (296-364)||(38430081-38430149)
[»] scaffold0392 (1 HSPs)
scaffold0392 (291-364)||(6789-6862)
[»] scaffold0010 (1 HSPs)
scaffold0010 (295-358)||(160347-160410)
[»] scaffold0245 (1 HSPs)
scaffold0245 (296-353)||(16464-16521)
[»] scaffold0024 (1 HSPs)
scaffold0024 (296-357)||(48140-48201)
[»] scaffold1858 (1 HSPs)
scaffold1858 (295-370)||(887-961)
[»] scaffold1318 (1 HSPs)
scaffold1318 (296-383)||(528-615)
[»] scaffold0692 (1 HSPs)
scaffold0692 (296-382)||(4833-4919)
[»] scaffold0199 (1 HSPs)
scaffold0199 (296-382)||(14780-14866)
[»] scaffold0050 (1 HSPs)
scaffold0050 (298-364)||(58243-58309)
[»] scaffold0041 (1 HSPs)
scaffold0041 (296-381)||(16775-16860)
[»] scaffold0015 (1 HSPs)
scaffold0015 (295-364)||(66734-66803)
[»] scaffold0006 (1 HSPs)
scaffold0006 (330-382)||(163193-163245)


Alignment Details
Target: chr4 (Bit Score: 572; Significance: 0; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 8 - 684
Target Start/End: Original strand, 50579 - 51242
Alignment:
Q  8 gtgttttccggtttttggactgttggcacaatttttgaagcatcacttgcttgggtaaattaattatttttgtcttgtttcttcattcatttgcgttgaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50579 gtgttttccggtttttggactgttggcacaatttttgaagcatcacttgcttgggtaaattaattatttttgtct-gtttcttcattcatttgcgttgaa 50677  T
Q  108 agattaaaatctatgttaatgtttctttacnnnnnnnnataatagaaaagatggtggaaattagggttaggtggttt-gggtatgttgagaagaattgta 206  Q
    ||||||||||||||||||||||||||||||        ||||||||||            ||||||||||||||||| |||||||| |||||||||||||    
T  50678 agattaaaatctatgttaatgtttctttacttttttt-ataatagaaa------------ttagggttaggtggttttgggtatgtagagaagaattgta 50764  T
Q  207 gattctgtagcaaagagagtagttctgatggagaatagtcaaataactatttagagaggaagaccaagaaaaagcataagaaaagatagaaatatggttt 306  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50765 gattctgtagcaaagagagcagttctgatggagaatagtcaaatcactatttacagaggaagaccaagaaaaagcataagaaaagatagaaatatggttt 50864  T
Q  307 atgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtttctctcctagctttgcacgcagtt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50865 atgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtttctttcctagctttgcacgcagtt 50964  T
Q  407 catgatctgttttcctagctttccgcgcacgatagacatacatattgattgtaaaccagtacttaagagtgtatacactaggaaagaaaagaggataact 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50965 catgatctgttttcctagctttccgcgcacgatagacatacatattgattgtaaaccagtacttaagagtgtatacactaggaaagaaaagaggataact 51064  T
Q  507 aacacctccgcaaatgtaacaaaatgagacataagaggagttagttattatttagatgaggttaatatagtgagtagtcggagataggtagaaacagaaa 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51065 aacacctccgcaaatgtaacaaaatgagacataagaggagttagttattatttagatgaggttaatatagtgagtagtcggagataggtagaaacagaaa 51164  T
Q  607 aagtatgtaaggaaagaatacgaatcaagggaaggtcaatgtgttttacttaacaaaggggtgtatgtgccattttag 684  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51165 aagtatgtaaggaaagaatacgaatcaagggaaggtcaatgtgttttacttaacaaaggggtgtatgtgccattttag 51242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 29399000 - 29399063
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||| |||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||    
T  29399000 gaaataaggtttatgatagaacattatggcgtaatttgattcatgtagctgaccccacttagtg 29399063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 53540487 - 53540573
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||||||| |||||| ||||| ||| ||||  || ||||| |||| ||||| ||||| ||||| |||||    
T  53540487 aaatatggtttatgatagaacattatggcataatttgatccatatagccaaccccactgagtgggataagacttggttgttattgtt 53540573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 12443291 - 12443339
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagc 343  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  12443291 gaaatatggtttatgatagaacattatggcataatttgatccatgtagc 12443339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 13805351 - 13805283
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgata 363  Q
    ||||||||||||||||||||||||||| | |||| ||||| ||||||||  || |||||||||| ||||    
T  13805351 gaaatatggtttatgatagaacattatgggataatttgatccatgtagccaaccccacttagtgggata 13805283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 35690474 - 35690542
Alignment:
Q  302 ggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    |||||||||||||||||||| || ||| ||||| |||||||| ||| |||||||||| ||||| |||||    
T  35690474 ggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttg 35690542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 33709940 - 33710018
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagt 226  Q
    |||||||||||||||||| |||| ||||||||||| || ||||   |||||||| ||| |||||||||| |||||||||    
T  33709940 tagaaaagatggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattctgtagtaaagagagt 33710018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 36799740 - 36799657
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||| ||||| ||| |||||| ||||| |||||||  ||| |||||||||| |||||| ||| |||||| ||||    
T  36799740 atatggtttatgattgaacaatatcgcataatttgatccatgtagacgaccccacttagtgggataaagcttaattgttgttgt 36799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 382
Target Start/End: Original strand, 55007942 - 55008029
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||| ||||||  | ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  55007942 gaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 55008029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 20601737 - 20601651
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||| ||||||||||||||||||  | ||| |||||||||||| ||||  |||||||||| ||||| | || |||||| |||||    
T  20601737 aaatatgatttatgatagaacattatgacgtaatttgattcatgtaactgaacccacttagtgggataagagttaattgttgttgtt 20601651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 30621287 - 30621241
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgta 341  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||    
T  30621287 gaaatatggtttatgatagaacattatggcttaacttgatccatgta 30621241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 56439657 - 56439591
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcga 361  Q
    |||||||||||||||||||||||||||||| ||| || || ||| ||||  || |||||||||||||    
T  56439657 gaaatatggtttatgatagaacattatagcgtaatttaatccatatagccaaccccacttagtgcga 56439591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 31043269 - 31043338
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaa 365  Q
    ||||||||||| |||||||||| ||| |||||| ||||| | || ||||||| ||||||||||| |||||    
T  31043269 aaatatggtttgtgatagaacactattgcataatttgatccttgcagctgaccccacttagtgcaataaa 31043338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 54935348 - 54935393
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagc 343  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  54935348 atatggtttatgatagaacattataacataatttgatccatgtagc 54935393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 20131074 - 20131014
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttag 356  Q
    ||||||| ||||||||||||||| |||  |||| |||||||||||||| | ||||||||||    
T  20131074 aaatatgatttatgatagaacataataagataatttgattcatgtagccgcctccacttag 20131014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 26037590 - 26037522
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||| ||| || ||| | ||| |||||||| ||| |||||||||| |||||    
T  26037590 aaatatggtttatgatagaacactatggcgtaattggatccatgtagccgaccccacttagtgggataa 26037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 28277488 - 28277436
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgac 347  Q
    |||||||||||||||||| |||||||||| | || ||||||||||||| ||||    
T  28277488 gaaatatggtttatgataaaacattatagtaaaatttgattcatgtagttgac 28277436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 382
Target Start/End: Original strand, 25575020 - 25575107
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||| | |  ||| ||||| |||||||| ||| ||| |||||| |||||  |||| ||||| |||||    
T  25575020 gaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttagtgggataaggcttggttgttgttgtt 25575107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 34379599 - 34379657
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccactt 354  Q
    ||||||||||||||||||||| ||||| || |||||||| ||||||||| ||| ||||||    
T  34379599 gaaatatggtttatgatagaatattatggcgtaacttga-tcatgtagccgaccccactt 34379657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 51176774 - 51176833
Alignment:
Q  299 tatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||||||| ||||||||||||| |||||| ||||| |||||||| |||  |||||||||    
T  51176774 tatggtttaggatagaacattatggcataatttgatccatgtagcggaccacacttagtg 51176833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 382
Target Start/End: Original strand, 51438641 - 51438728
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||| ||| |||||||| || ||| ||||| |||||||||||| | |||| ||| |||||  |||| ||||| |||||    
T  51438641 gaaatatggtttataatataacattatggcgtaatttgatccatgtagctgacccaactttgtgggataaggcttggttgttgttgtt 51438728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 436426 - 436512
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| |||| |||||||||||| ||| |||| | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  436426 aaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 436512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 19154948 - 19154862
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| ||||||||||||||||| ||| || | | ||||| |||| ||||||| |||||||||| |||||  |||| ||||| |||||    
T  19154948 aaatttggtttatgatagaacactatggcgttatttgatccatgcagctgaccccacttagtgggataaggcttggttgttgttgtt 19154862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 28236379 - 28236465
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| ||||||||||||||| ||||| |  ||| |||||  ||||||| ||| |||||||||| ||||| ||||| ||||| |||||    
T  28236379 aaatttggtttatgatagaatattatggtgtaatttgatctatgtagccgaccccacttagtgggataagacttggttgttgttgtt 28236465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 34233109 - 34233047
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||| |||||||||||||||||| |||| ||| ||||| |||||||| ||| ||||| ||||    
T  34233109 aaataaggtttatgatagaacattgtagcgtaatttgatccatgtagccgacgccactcagtg 34233047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 39708630 - 39708704
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    |||||||||||||||||||||| |||  | ||| ||||| |||||||  ||| |||||||||| ||||| |||||    
T  39708630 aaatatggtttatgatagaacactatgtcgtaatttgatccatgtagtcgaccccacttagtgggataagacttg 39708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 2557758 - 2557669
Alignment:
Q  295 gaaatatggtttatgatagaacatta-tagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    |||||||||||||||||||||||||| | |  ||| ||||| ||||||||  |||||| |||||| |||||  |||| ||||| ||||||    
T  2557758 gaaatatggtttatgatagaacattattggtgtaatttgatccatgtagccaactccatttagtgggataaggcttggttgttgttgttt 2557669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 23906382 - 23906297
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||| |||| |||||||||||| ||| || | | ||||| |||||||||||| |||||||||| |||||  |||| ||||| ||||    
T  23906382 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgt 23906297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 46715638 - 46715558
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    |||||||||||||||||| |||| ||||||||| |||| ||||   |||||||  ||| |||| |||||||| ||||||||    
T  46715638 tagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaagacatgtggattatgtagcaaggagagtag 46715558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 7682001 - 7681945
Alignment:
Q  290 agatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctga 346  Q
    ||||||||||||||| |||||||| ||||||| ||||   ||||| |||||||||||    
T  7682001 agatagaaatatggtatatgataggacattattgcatcgtttgatccatgtagctga 7681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 49987444 - 49987480
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgg 186  Q
    |||||||||||||||||| |||| |||||||||||||    
T  49987444 tagaaaagatggtggaaaataggcttaggtggtttgg 49987480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 18855804 - 18855890
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||| ||||| ||||| ||||| |||||    
T  18855804 aaatatggtttatgatagaacattatagcataatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgtt 18855890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 385
Target Start/End: Original strand, 5558338 - 5558427
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtttct 385  Q
    |||||||||||||||||||||| ||| |||||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||  ||||||||    
T  5558338 aaatatggtttatgatagaacactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgtcgttgtttct 5558427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 9235243 - 9235311
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||| |||||    
T  9235243 gaaatatggtttatgatagaacattatggcataatttgatccatgtagccgac-ccacttagtgggataa 9235311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 30588461 - 30588545
Alignment:
Q  146 ataatagaaaagatggtggaaattagggttaggtggtttgggtatgtt--gagaagaattgtagattctgtagcaaagagagtag 228  Q
    |||||||||||||||||||||| |||| ||| |||||||||| || ||  ||||||| ||||||||||||||| || ||||||||    
T  30588461 ataatagaaaagatggtggaaaataggtttaagtggtttgggcatattcggagaagacttgtagattctgtagtaaggagagtag 30588545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 6859578 - 6859646
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||||| |||||| || || ||||| |||||| |||||||||| |||||    
T  6859578 aaatatggtttatgatagaacattatggcataattttatccatgttgctgaccccacttagtgggataa 6859646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 42199302 - 42199409
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||||||||||||||| |||  |||||||||||||| ||||   |||||||  |||||||||||||| || |||||||| ||  ||||||| ||||||    
T  42199302 tagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggagagtagtca 42199401  T
Q  248 aataacta 255  Q
    ||| ||||    
T  42199402 aatcacta 42199409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 6788263 - 6788325
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||||||| |||  ||||||||    
T  6788263 gaaatatgatttatgatagaacattatagcgtaatttgattcatgtagccgacctcacttagt 6788325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 32442210 - 32442142
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||  ||||||||||||| || ||| ||||| |||||||| |||||||||||||| |||||    
T  32442210 aaatatggttttggatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataa 32442142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 38684672 - 38684764
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    ||||||||||||||   |||||||||||||| || | | ||||||||||||| |||| ||||||||||  ||||| |||| ||||| ||||||    
T  38684672 gatagaaatatggtacttgatagaacattatggcgttatttgattcatgtagttgaccccacttagtggaataaagcttggttgttgttgttt 38684764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 21193742 - 21193675
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||||||||||||||||||| ||||||  ||||| |||||||||||| | ||| |||| |||||    
T  21193742 gatagaaatatggtttatgatagatcattatgacataatttgattcatgtatccgaccccacgtagtg 21193675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 38830516 - 38830578
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||| | ||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||    
T  38830516 gaaatatgatgtatgatagaacattatagcgtaa-ttgatccatgtagctgaccccacttagtg 38830578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 28985285 - 28985342
Alignment:
Q  301 tggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||| ||||||||||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  28985285 tggtttgtgatagaacattatagcttaatttgatccatgtagccgaccccacttagtg 28985342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 43475256 - 43475364
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtat--gttgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||||||||||||||| |||| |||||||||||||||||     |||||||  |||||||  ||||| || |||||||| || ||||||| |||||||    
T  43475256 tagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcagatggaggatagtca 43475355  T
Q  248 aataactat 256  Q
     || |||||    
T  43475356 gatcactat 43475364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 43557919 - 43557850
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||||||  | ||| |||||  ||||||| ||| |||||||||| |||||    
T  43557919 gaaatatggtttatgatagaacattatgacttaagttgatctatgtagccgaccccacttagtgggataa 43557850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 7359346 - 7359255
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtttctct 387  Q
    ||||||||||||| |||| ||||||||  | ||| ||||| |||||||||||| |||||||||| || || ||||| ||||| ||||| ||||    
T  7359346 gaaatatggtttacgata-aacattatgacgtaatttgatccatgtagctgaccccacttagtgggacaagacttggttgttgttgttgctct 7359255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 375
Target Start/End: Original strand, 14667971 - 14668047
Alignment:
Q  299 tatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgt 375  Q
    ||||||||||||||||||||||| |  ||| ||||| |||||| | ||| |||||||||| ||||| ||||| ||||    
T  14667971 tatggtttatgatagaacattatggtgtaatttgatccatgtaaccgaccccacttagtgggataagacttggttgt 14668047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 21093772 - 21093867
Alignment:
Q  154 aaagatggtggaaattagggttaggtggtttgggtatgttgag--aagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||| ||||||||| |||| |||||| ||||||| |||| |||  |||| ||| ||||| ||||| ||||||||||| || ||||||| |||||||    
T  21093772 aaagttggtggaaaataggcttaggtagtttgggcatgtagagggaagacttggagattttgtagtaaagagagtagatcagatggaggatagtca 21093867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 38685164 - 38685232
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||    
T  38685164 aaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccacttagtgggataa 38685232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 41108820 - 41108752
Alignment:
Q  290 agatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||| ||||| ||||| ||||||| ||||||| || ||| ||||| |||||||||||| ||||||||||    
T  41108820 agattgaaatctggttcatgatagtacattatggcgtaatttgatccatgtagctgaccccacttagtg 41108752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Complemental strand, 418119 - 418052
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgata 363  Q
    |||| ||||||||||||||||||||| || ||| ||||| |||||||| ||| |||||| ||| ||||    
T  418119 aaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttggtgggata 418052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 28079 - 28153
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    ||||||| ||| |||||||||| ||| |||||| ||||| |||||||||||| ||| |||||  ||||| |||||    
T  28079 aaatatgatttctgatagaacactatggcataatttgatacatgtagctgaccccatttagttagataagacttg 28153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 4496581 - 4496667
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| |||| |||||||||||| ||| |||| | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  4496581 aaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 4496667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 382
Target Start/End: Original strand, 5860035 - 5860117
Alignment:
Q  300 atggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||| |||||| || ||| |||||  ||||||| ||| | |||||||| |||||  |||||||||| |||||    
T  5860035 atggtttatgatagaccattatggcgtaatttgatctatgtagccgaccctacttagtgggataaggcttgattgttgttgtt 5860117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 6889190 - 6889240
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctga 346  Q
    |||||||||||||||||||||||||| || ||| || || |||||||||||    
T  6889190 aaatatggtttatgatagaacattatggcgtaatttaatccatgtagctga 6889240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 11675727 - 11675813
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||||||| || ||  || || |||||||| ||| |||||||||  |||||  |||| ||||| |||||    
T  11675727 aaatatggtttatgatagaacattatggcgtagtttaatccatgtagccgaccccacttagttggataaggcttggttgttgttgtt 11675813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 20456980 - 20457050
Alignment:
Q  306 tatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgtt 376  Q
    |||||||||||||||| || | | ||||| |||||||| ||| |||||||||| |||||  ||||||||||    
T  20456980 tatgatagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgtt 20457050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 28976944 - 28976858
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| |||| |||||||||||| ||| || | | |||||||||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  28976944 aaatttggtgtatgatagaacactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28976858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 29938127 - 29938165
Alignment:
Q  146 ataatagaaaagatggtggaaattagggttaggtggttt 184  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  29938127 ataatagaaaagatggtggaaaataggcttaggtggttt 29938165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 35615475 - 35615548
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaa 365  Q
    |||| |||||| |||||||||||||||||||  | ||||||||||||| |||| ||| ||| |||||| ||||||    
T  35615475 gataaaaatatagtttatgatagaacattatgacctaacttgattcatatagccgac-ccatttagtgtgataaa 35615548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 38132542 - 38132620
Alignment:
Q  305 ttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    ||||||||||||||||| || ||| ||||| ||||| || ||| |||||||||| |||||  |||| ||||| ||||||    
T  38132542 ttatgatagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttgttgttgttt 38132620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 30588643 - 30588712
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||| ||||||||||||  | | |  |||| |||||||| |||||||||||||| |||||    
T  30588643 gaaatatggtttataatagaacattatgacgtgatatgatccatgtagccgactccacttagtgggataa 30588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 38341683 - 38341638
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttga 195  Q
    |||||||||  ||||||| |||| ||||||||||||||||||||||    
T  38341683 tagaaaagacagtggaaaataggcttaggtggtttgggtatgttga 38341638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 43558097 - 43558056
Alignment:
Q  146 ataatagaaaagatggtggaaattagggttaggtggtttggg 187  Q
    |||||||||||||||||||||| || | ||||||||||||||    
T  43558097 ataatagaaaagatggtggaaactaagcttaggtggtttggg 43558056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 7678708 - 7678760
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||| |||||||| ||| |||||||||| ||||||||||| ||||| |||||    
T  7678708 ttgatccatgtagccgaccccacttagtgggataaaacttggttgttgttgtt 7678760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 34591 - 34504
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||||| || ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| |||||    
T  34591 gaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagtgggataagacttggttgttgttgtt 34504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 12890772 - 12890858
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  12890772 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 12890858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 9706967 - 9707052
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||| |||||||||| ||| |||| | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  9706967 aaatatggtttttgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9707052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 32097934 - 32098003
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaa 365  Q
    ||||||| ||||||||| |||||||| || ||| ||||| |||||||| || ||||||||||| ||||||    
T  32097934 aaatatgatttatgatataacattatggcgtaaattgatacatgtagccgattccacttagtgggataaa 32098003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 2079356 - 2079435
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagta 227  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||   ||||||| ||||||||| ||||| || |||||||    
T  2079356 tagaaaagatggtggaaaataggcttaagtggtttaggtatgtagagagaagatttgtagattatgtagtaaggagagta 2079435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 5096031 - 5096099
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||||| || ||| |||||  ||||||| ||  |||||||||| |||||    
T  5096031 aaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatcccacttagtgggataa 5096099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 7513076 - 7513008
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgata 363  Q
    |||||||||||||||||||||||||||  | ||| |||||  |||||| |||| |||||||||| ||||    
T  7513076 gaaatatggtttatgatagaacattatgacgtaatttgatctatgtagttgaccccacttagtgggata 7513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 26291974 - 26292018
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgt 340  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||    
T  26291974 aaatatggtttatgatataacattataacataatttgattcatgt 26292018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 30031453 - 30031521
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||| ||| || ||| ||||| |||||||| |||  ||||||||| |||||    
T  30031453 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacctcacttagtgggataa 30031521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 586042 - 586133
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||| || ||||||||||||||||  | | | |||||||||| ||| |||  |||||| || |||||| |||||||||| |||||    
T  586042 gatagaaatattgtatatgatagaacattatgacgtcatttgattcatggagccgacctcacttaatgggataaaccttgattgttgttgtt 586133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 2079477 - 2079540
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||| ||||||||||| ||||||||| ||| || || |||||||| ||||| ||||||||    
T  2079477 gaaatatgatttatgatagagcattatagcgtaatttaatccatgtagccgactcgacttagtg 2079540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 8364752 - 8364815
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||| |||||||||||||||||||||| || ||| ||||| |||||||| ||| || |||||||    
T  8364752 gaaacatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccgcttagtg 8364815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 9593972 - 9593870
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    ||||||||||||| |||| |||| |||||||||||||| ||||   |||||||  ||||||| |||||| ||  ||||||| || ||||||| | |||||    
T  9593972 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtca 9593873  T
Q  248 aat 250  Q
    |||    
T  9593872 aat 9593870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 31818731 - 31818813
Alignment:
Q  299 tatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||||||  | ||| ||||| |||||||| ||| |||||||| | || ||| |||| ||||| ||||    
T  31818731 tatggtttatgatagaacattatgtcgtaatttgatccatgtagccgaccccacttagcgggaaaaagcttggttgttgttgt 31818813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 4948577 - 4948540
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttggg 187  Q
    |||||||||||||||||||| || ||||||||||||||    
T  4948577 tagaaaagatggtggaaattcggcttaggtggtttggg 4948540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 4955548 - 4955511
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttggg 187  Q
    |||||||||||||||||||| || ||||||||||||||    
T  4955548 tagaaaagatggtggaaattcggcttaggtggtttggg 4955511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 35914686 - 35914601
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||||||||| || ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||    
T  35914686 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagtgagataagacttggttgttgttgt 35914601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 490532 - 490618
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||||||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  490532 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgttgtt 490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 16035813 - 16035743
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaa 365  Q
    ||||||||||||||| |||||||||||  | ||| |||||||||||||||||| |||||||||| ||||||    
T  16035813 gaaatatggtttatggtagaacattatgacgtaatttgattcatgtagctgaccccacttagtgggataaa 16035743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 32931156 - 32931219
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||||| |||||||||||||||| |||||| ||||| |||||||| ||| ||||||||||    
T  32931156 gaaatatggtgtatgatagaacattatggcataatttgatccatgtagccgaccccacttagtg 32931219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 42584556 - 42584641
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||||  | ||| |||| || |||||| ||| |||||||||| ||||| ||||||||||| |||||    
T  42584556 aaatatggtttatgatagaacattatgacgtaatttga-tcttgtagccgaccccacttagtgggataagacttgattgttgttgtt 42584641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 27556378 - 27556301
Alignment:
Q  305 ttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||| | |||| |||| ||||| |||||    
T  27556378 ttatgatagaacattatggcataatttgatccatgtagccgaccccacttagtgggttaaagcttggttgttgttgtt 27556301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 2518658 - 2518579
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagta 227  Q
    |||||||||||||||||| |||| ||||||||||||  |||||   ||||||| ||||||||| ||||| ||||||||||    
T  2518658 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttgtagattttgtaggaaagagagta 2518579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 45041400 - 45041333
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||  |||||| || ||| ||||| |||||||||||| |||||||||| |||||    
T  45041400 aatatggtttatgatagcgcattatggcgtaatttgatccatgtagctgaccccacttagtgggataa 45041333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 2518484 - 2518422
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    |||||||| ||| |||||||||||||| |||||| ||||| | |||||||||| |||||||||    
T  2518484 gaaatatgatttctgatagaacattatggcataatttgatccttgtagctgaccccacttagt 2518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 14903758 - 14903844
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||| |||||||||||| ||||||| || ||| ||||| ||||||||| || |||||||||| |  |||||||| ||||| |||||    
T  14903758 aaataaggtttatgataggacattatggcgtaatttgatccatgtagcttaccccacttagtggggaaaaacttggttgttgttgtt 14903844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 29520846 - 29520931
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||||||||| || ||| ||||| ||||||||  || ||| |||||| |||||  |||| ||||| ||||    
T  29520846 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagcccaccccatttagtgggataatgcttggttgttgttgt 29520931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 44529422 - 44529507
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||| ||||||||||||||||| ||| |||| | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  44529422 aaatttggtttatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44529507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 45419432 - 45419517
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||| ||||||||||||||||||||| |  ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  45419432 aaatttggtttatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 45419517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 16917200 - 16917306
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||||||||||| ||| |||| |||||||||||||| ||||   ||||||  ||||||||| ||||| || |||||||| || ||| ||| |||||||    
T  16917200 tagaaaagatggtgcaaactaggcttaggtggtttgggcatgtaaagagaaggcttgtagatt-tgtagtaaggagagtagatcagattgaggatagtca 16917298  T
Q  248 aataacta 255  Q
    ||| ||||    
T  16917299 aatcacta 16917306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 21425242 - 21425305
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||| ||||||||||| |||||| |||||| ||||| |||||||| ||| | ||||||||    
T  21425242 gaaatatgatttatgatagaccattatggcataatttgatccatgtagcagaccctacttagtg 21425305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Complemental strand, 25473488 - 25473401
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    |||| |||| |||||||||||| |||||| | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||||    
T  25473488 aaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttt 25473401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 43904750 - 43904703
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagc 343  Q
    |||||||||||||||||||||||||| || ||| ||||| ||||||||    
T  43904750 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 43904703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 12611551 - 12611593
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt 192  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  12611551 tagaaaagatggtggaaactaggcttaggtggtttgcgtatgt 12611593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 29700480 - 29700534
Alignment:
Q  303 gtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    ||||||||||||||||||| |  ||| ||||| |||||||| |||||||||||||    
T  29700480 gtttatgatagaacattatggtgtaatttgatccatgtagccgactccacttagt 29700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 35320472 - 35320398
Alignment:
Q  309 gatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    ||||||||||||| || ||| || ||| ||||||||||| |||||||||| |||||| |||| || || ||||||    
T  35320472 gatagaacattatggcttaatttaattaatgtagctgaccccacttagtgggataaagcttggttattgttgttt 35320398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 42469812 - 42469726
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||| |||||||||| ||| || | | ||||| |||||||||||| ||||||| || |||||  |||| ||||| |||||    
T  42469812 aaatatggtttttgatagaacactatggcgtcatttgatccatgtagctgaccccacttattgggataaggcttggttgttgttgtt 42469726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 44047617 - 44047531
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| |||||||||||||||||  || || | | ||||| |||||||||||| |||||||||| |||||  |||| ||||| |||||    
T  44047617 aaatttggtttatgatagaacaccatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgtt 44047531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 1928659 - 1928586
Alignment:
Q  309 gatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  1928659 gatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1928586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 2216490 - 2216551
Alignment:
Q  303 gtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||  ||| ||||| |||||||| ||| ||||| |||| |||||    
T  2216490 gtttatgatagaacattatagtgtaatttgatccatgtagccgaccccactcagtgagataa 2216551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 8255618 - 8255530
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagc--tgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||| || ||| || ||| ||||| ||||||||   ||| |||||||||| |||||| |||| ||||| |||||    
T  8255618 aaatatggtttatgatagaccaatatggcgtaatttgatccatgtagccgagacaccacttagtgggataaagcttggttgttgttgtt 8255530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 9695647 - 9695727
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttgagaagaat--tgtagattctgtagcaaagagagtag 228  Q
    |||||||||||||||||| | || |||||||||||||| |||| ||||  | |  ||||||||||| || |||||||||||    
T  9695647 tagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaagtcctgtagattctgaagtaaagagagtag 9695727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 21121344 - 21121404
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||||||||||||||||||| ||| || ||| |||| ||||||||| ||| ||||||||||    
T  21121344 aatatggtttatgatagaacactatggcgtaatttga-tcatgtagccgaccccacttagtg 21121404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 2796750 - 2796818
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||| |||||| |||||||||| ||| || ||| |||||||||||||  ||| |||||||||| |||||    
T  2796750 aaatttggtttttgatagaacagtatggcgtaatttgattcatgtagacgaccccacttagtgggataa 2796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 10824430 - 10824390
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtat 190  Q
    ||||||||||||| |||| |||| |||||||||||||||||    
T  10824430 tagaaaagatggtcgaaaataggcttaggtggtttgggtat 10824390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 31309584 - 31309636
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||| ||| |||||||||| ||||| ||||| ||||| |||||    
T  31309584 ttgattcatgtagccgacaccacttagtgggataagacttggttgttgttgtt 31309636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 39953315 - 39953263
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||| ||| |||||||||| ||||| ||||| ||||| |||||    
T  39953315 ttgattcatgtagccgaccccacttagtgggataagacttggttgttgttgtt 39953263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 41444592 - 41444556
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgg 186  Q
    |||||||||||||||||| |||| |||||||||||||    
T  41444592 tagaaaagatggtggaaactaggtttaggtggtttgg 41444556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 41972044 - 41971937
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||||||||||||||| || | |||||||||||||  ||||   |||||||  |||||||| | |||||| |||||||| || | ||||  |||||||    
T  41972044 tagaaaagatggtggaaaataagtttaggtggtttggacatgtagagagaagacgtgtagattttctagcaaggagagtagatcaggtggacgatagtca 41971945  T
Q  248 aataacta 255  Q
    ||| ||||    
T  41971944 aatcacta 41971937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 45317576 - 45317628
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||| |||||||| ||||| | |||||| ||||||||||||||||| |||||    
T  45317576 ttgatccatgtagccgactctaattagtgagataaaacttgattgttgttgtt 45317628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 27893649 - 27893562
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||| ||| | ||||||||||||||  |||| ||||| |||||    
T  27893649 gaaatatgttttatgatagaacattatggcataatttgattcatgtagccgaccctacttagtgcgataaggcttggttgttgttgtt 27893562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 1740817 - 1740924
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttg--agaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    ||||||| |||||||||| |||| ||||||||||||||||||| |  || |||||||| |||| ||||| || |||||||| || |||||||  ||||||    
T  1740817 tagaaaatatggtggaaactaggcttaggtggtttgggtatgtagataggagaattgtggattttgtagtaaggagagtagatcagatggagggtagtca 1740916  T
Q  248 aataacta 255  Q
    ||| ||||    
T  1740917 aatcacta 1740924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 9210789 - 9210721
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||||||| |||||||| || ||| ||||| |||||||||||| |||||||||| |||||    
T  9210789 aaatatggtttatgatacaacattatggcgtaatttgatccatgtagctgaccccacttagtgggataa 9210721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 28628018 - 28627950
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||| ||||||||||||||||||||| || ||| ||||| |||||||| |||||||||||||| |||||    
T  28628018 aaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataa 28627950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 47848690 - 47848788
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtc 246  Q
    |||||||||||||||||| |||| |||||||||||||| ||||   ||||||| ||||| ||||||||  || |||||||| || ||||||| ||||||    
T  47848690 tagaaaagatggtggaaaataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtc 47848788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 36101862 - 36101776
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||||  | ||| ||||| ||||||| |||| |||||||||| |||||  |||| ||||| |||||    
T  36101862 aaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgaccccacttagtgggataaggcttggttgttgttgtt 36101776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 40980013 - 40979928
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||||| ||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  40980013 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 40979928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 42969895 - 42969963
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||| ||||||||| | |||| ||||| |||||||| ||| |||||||||| |||||    
T  42969895 aaatatggtttatgattgaacattatcgtataatttgatccatgtagccgaccccacttagtgggataa 42969963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 2885807 - 2885721
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| |  ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  2885807 aaatatggtttatgatagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 2885721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 28208413 - 28208327
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  28208413 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28208327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 42187482 - 42187528
Alignment:
Q  146 ataatagaaaagatggtggaaattagggttaggtggtttgggtatgt 192  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  42187482 ataatagaaaagatggtggaaaataggcttaggtggtttgggcatgt 42187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 47652744 - 47652830
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||  ||||||||||||| || ||||||||| | |||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  47652744 aaatatggtttcggatagaacattatggcgtaacttgatccctgtagccgaccccacttagtgggataaggcttggttgttgttgtt 47652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 382
Target Start/End: Original strand, 25891086 - 25891171
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||| |||||||||||| |  ||| ||||| |||||||| ||| ||||||||| ||||||  |||| ||||| |||||    
T  25891086 aatatggtttataatagaacattatggtgtaatttgatccatgtagccgaccccacttagtacgataaggcttggttgttgttgtt 25891171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 33103124 - 33103184
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    |||||||||||||||||||||  ||||| ||| ||||| |||||||| ||| |||||||||    
T  33103124 aatatggtttatgatagaacaccatagcgtaatttgatccatgtagccgaccccacttagt 33103184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 36102035 - 36101932
Alignment:
Q  146 ataatagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaata 243  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||   |||||||  | |||||| |||| ||  |||||||| ||  ||||||||||    
T  36102035 ataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacctatagattttgtaacagggagagtagatcatatggagaata 36101936  T
Q  244 gtca 247  Q
    ||||    
T  36101935 gtca 36101932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 45836567 - 45836499
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||    
T  45836567 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 45836499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 384
Target Start/End: Original strand, 1011244 - 1011331
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtttc 384  Q
    ||||||||||| ||||||||||||| |  ||| |||||  ||||||| ||| |||||||||| |||||  |||| ||||| |||||||    
T  1011244 aatatggtttaggatagaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgtttc 1011331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Original strand, 7273297 - 7273384
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    ||||||||||||||||| | || |||  | ||| ||||| |||||||| ||| |||||||||| |||||  |||||||||| ||||||    
T  7273297 aaatatggtttatgatatagcactatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgttgttt 7273384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Original strand, 27648977 - 27649064
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    |||| ||||||||||||||||| | | || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||||    
T  27648977 aaatttggtttatgatagaacactgtggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttt 27649064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 28628199 - 28628097
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||| ||||||||||| | || |||||||||||||| ||||   ||||| |  |||||||| ||||| || |||||||| || ||||||| |||||||    
T  28628199 tagaaatgatggtggaaaattggcttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccgatggaggatagtca 28628100  T
Q  248 aat 250  Q
    |||    
T  28628099 aat 28628097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 30814211 - 30814148
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||| ||||||||||||||||||  | ||| ||||| |||||||| ||| ||||||||||    
T  30814211 gaaatatgttttatgatagaacattatcacgtaatttgatccatgtagccgaccccacttagtg 30814148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 35713713 - 35713799
Alignment:
Q  152 gaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatg 236  Q
    ||||| |||||||||| |||| |||||||||||||| ||||   ||||||| ||||| ||| ||||| || |||||||| |||||||    
T  35713713 gaaaaaatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaaggagagtagatctgatg 35713799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 40169665 - 40169712
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttgaga 197  Q
    |||||||||||||||||| |||| |||||||||||||| |||| ||||    
T  40169665 tagaaaagatggtggaaaataggcttaggtggtttgggcatgtagaga 40169712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 12841360 - 12841274
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| ||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  12841360 aaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 12841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 23720970 - 23721028
Alignment:
Q  263 aggaagaccaagaaaaagcataagaaaagatagaaatatggtttatgatagaacattat 321  Q
    ||||||||| |||||||  || |  ||||||||||||||| ||||||||||||||||||    
T  23720970 aggaagaccgagaaaaactattaagaaagatagaaatatgatttatgatagaacattat 23721028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 25579342 - 25579241
Alignment:
Q  151 agaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtcaa 248  Q
    |||||| |||||||||| |||| |||||||||||||| ||||   |||||||  |||||||||||| | ||  ||||||| |  ||||||| ||||||||    
T  25579342 agaaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggatagtcaa 25579243  T
Q  249 at 250  Q
    ||    
T  25579242 at 25579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 48515370 - 48515436
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||| || ||| || ||||||||||| | | | |||||||| |||||    
T  48515370 atatggtttatgatagaacattatggcgtaattttattcatgtagccgccccaacttagtgggataa 48515436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 14057675 - 14057736
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    |||||||||||||||||||||||||| |  ||| ||||| ||||||||  || |||||||||    
T  14057675 aaatatggtttatgatagaacattatggggtaatttgatccatgtagccaaccccacttagt 14057736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 14367703 - 14367764
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    |||||||||||||||||||||||||| |  ||| ||||| ||||||||  || |||||||||    
T  14367703 aaatatggtttatgatagaacattatggggtaatttgatccatgtagccaaccccacttagt 14367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 28020980 - 28021060
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    |||||||||||||||||| | || |||||||||||||| ||||   ||||||| |||||| |||||||  || ||||||||    
T  28020980 tagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaagatttgtaggttctgtaataaggagagtag 28021060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 31682682 - 31682601
Alignment:
Q  301 tggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  31682682 tggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 31682601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 41948530 - 41948579
Alignment:
Q  148 aatagaaaagatggtggaaattagggttaggtggtttgggtatgttgaga 197  Q
    |||||||||||||||||||| |||| ||| |||||||||| |||| ||||    
T  41948530 aatagaaaagatggtggaaactaggcttaagtggtttgggcatgtagaga 41948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 6420747 - 6420676
Alignment:
Q  159 tggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    ||||||||| |||| |||||||||||||| ||||   ||||||| |||||||| |||||| || ||||||||    
T  6420747 tggtggaaactaggcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtag 6420676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 33732025 - 33732114
Alignment:
Q  290 agatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||| ||||||||||||||||||||||||||| ||  || ||||| |||||||| |   |||||||||| |||||  |||| ||||| ||||    
T  33732025 agatcgaaatatggtttatgatagaacattatggc--aatttgatccatgtagccggtcccacttagtgggataaggcttggttgttgttgt 33732114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 42187642 - 42187706
Alignment:
Q  301 tggtttatgatagaaca-ttatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||||||| |||| || ||| ||||| |||||||| ||| |||||||||| |||||    
T  42187642 tggtttatgatagaacatttatggcgtaatttgatccatgtagccgaccccacttagtgggataa 42187706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 47155223 - 47155179
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattg 374  Q
    |||||||||||||| ||| |||||||||| |||||| ||||||||    
T  47155223 ttgattcatgtagccgaccccacttagtgggataaagcttgattg 47155179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 28090779 - 28090693
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||||||| || ||| ||||| |||||||| ||| |||||||||| ||||| ||||| ||||| |||||    
T  28090779 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgtt 28090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 48431672 - 48431574
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtc 246  Q
    |||||||||||||||||| |||| |||||||||||||| ||||   ||||||| ||||||||| ||||| ||||||||| | || ||||||| ||||||    
T  48431672 tagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagatggaggatagtc 48431574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 19936657 - 19936743
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||| ||||||||||||||  || ||| ||||| |||||||| |||||| ||||||| ||||| ||||||||||| |||||    
T  19936657 aaatatggttaatgatagaacattacggcgtaatttgatccatgtagccgactccgcttagtgggataagacttgattgttgttgtt 19936743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 52532701 - 52532639
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  52532701 aaatatggtttatgatagaacattatggcgtaatttgattcatgtagccgaccccacttagtg 52532639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 2544789 - 2544852
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||||||||| |||||||||||| |||||| ||||| |||||||| ||| ||||||||||    
T  2544789 gaaatatggtttataatagaacattatggcataatttgatccatgtagccgaccccacttagtg 2544852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 382
Target Start/End: Original strand, 8796405 - 8796492
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||||| || ||| || || |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  8796405 gaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 8796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 41017298 - 41017216
Alignment:
Q  299 tatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||| ||||||||||||||  |||| ||||| ||||| |||||    
T  41017298 tatggtttatgatagaacattatagcataatttggtcgatgtagc-gactccacttagtggaataagacttggttgttgttgtt 41017216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 11584194 - 11584280
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||| ||||||| |||||||| | |||| ||||| ||| || | |||||||||||||| ||||| ||||||||||| |||||    
T  11584194 aaatatggtctatgataaaacattatggtataatttgatccatctaaccgactccacttagtgggataagacttgattgttgttgtt 11584280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 41560426 - 41560512
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||| ||||||||||||||||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  41560426 aaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 41560512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 14226096 - 14225988
Alignment:
Q  149 atagaaaagatggtggaaattagggttaggtggtttgggtatgttgagaagaat--tgtagattctgtagcaaagagagtagttctgatggagaatagtc 246  Q
    ||||||||||||||||||| |||| |||||||||||||| |||| |||| || |  |||||||| ||||| || |||||||| ||  ||||||  |||||    
T  14226096 atagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcacatggagcgtagtc 14225997  T
Q  247 aaataacta 255  Q
    |||| ||||    
T  14225996 aaatcacta 14225988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 21769796 - 21769711
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||| |||||||||||||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  21769796 aaatatggtttgtgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgtgataaggcttggttgttgttgt 21769711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 1704834 - 1704910
Alignment:
Q  306 tatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||| || |||||| ||||| ||||| |||||| |||||||||| ||||| ||||| ||||| |||||    
T  1704834 tatgatagaacatcatggcataatttgatccatgttgctgaccccacttagtgtgataagacttggttgttgttgtt 1704910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 376
Target Start/End: Complemental strand, 19908120 - 19908040
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgtt 376  Q
    |||||||||||||||| ||||||||| || ||| || || |||||||| ||| |||||||||| |||||  ||||||||||    
T  19908120 aaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggataaggcttgattgtt 19908040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 22175342 - 22175410
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||||| | | || ||||| |||||||| ||| |||||||||| |||||    
T  22175342 aaatatggtttatgatagaacattatggtagaatttgatccatgtagccgaccccacttagtgggataa 22175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 37462961 - 37462893
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||| |||||||||||| || ||| ||||| |||||||| ||| |||||||||| |||||    
T  37462961 aaatatggtttatcatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 37462893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 39140712 - 39140780
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||  ||||||||||||| || ||| |||||||||||||| ||| |||||||||| |||||    
T  39140712 aaatatggtttcagatagaacattatggcgtaatttgattcatgtagccgaccccacttagtgggataa 39140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 6025797 - 6025888
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||| | ||||||||||| || || | | ||||| |||||||| || ||||||||||| ||||| ||||| ||||| |||||    
T  6025797 gatagaaatatggtatctgatagaacatgatggcgtcatttgatccatgtagccgattccacttagtgggataatacttggttgtttttgtt 6025888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 25715412 - 25715326
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||||||||||||| ||||| || ||| ||||| |||||||| |||  ||||||||| |||||  |||| ||||| ||||    
T  25715412 gaaatatggtttatgatagaatattatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgttgt 25715326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 25979316 - 25979230
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  25979316 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25979230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 38807756 - 38807670
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || ||| ||| | |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  38807756 aaatatggtttatgatagaacactatggcgtaatttgttccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 38807670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 44941861 - 44941775
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| ||||||||||||||||| ||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  44941861 aaatttggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 44941775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 50846759 - 50846821
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||| ||||||||||||||||||| |||||| |||||  ||||||| ||| ||||||||||    
T  50846759 aaatatagtttatgatagaacattatggcataatttgatctatgtagccgacaccacttagtg 50846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 1290116 - 1290059
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccact 353  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| || ||| |||||    
T  1290116 aaatatggtttatgatagaacattatggcataatttgatccatgtggccgaccccact 1290059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 13827836 - 13827756
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    ||||||||| |||||||| |||||| |||||||||||  ||||   |||||||| |||||||||||||| || ||||||||    
T  13827836 tagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtag 13827756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 27072574 - 27072525
Alignment:
Q  294 agaaatatggtttatgatagaacattatagcataacttgattcatgtagc 343  Q
    |||||||||||||||||||||||||||| || ||| ||||| ||||||||    
T  27072574 agaaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 27072525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 45510917 - 45510844
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    |||||||||||||||||||||  ||||| ||| || || |||||||| ||| |||||||||| |||||| ||||    
T  45510917 aatatggtttatgatagaacaccatagcgtaatttaatccatgtagccgaccccacttagtgggataaagcttg 45510844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 52921277 - 52921362
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  52921277 aaatatggtttatgatagaacactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 31274492 - 31274400
Alignment:
Q  290 agatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| |||||||||||||||||| ||| |||| || ||| |||||   |||||||||| |||||||||| |||||  |||| ||||| |||||    
T  31274492 agattgaaatatggtttatgatataacgttatggcgtaatttgatctgtgtagctgaccccacttagtgggataatgcttggttgttgttgtt 31274400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 35828816 - 35828780
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgg 186  Q
    |||||||||||||||||| ||||||||||||||||||    
T  35828816 tagaaaagatggtggaaaatagggttaggtggtttgg 35828780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 40416387 - 40416486
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    ||||||||||||||||||  ||| ||||||||||| || ||||   |||||||| |||||||| ||||| || |||||||| || |||| || |||||||    
T  40416387 tagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggagagtagatcagatgcaggatagtca 40416486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 48801698 - 48801639
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttag 356  Q
    ||||||||||||||||||||||||| | ||||| ||||| |||||||||||  ||||||||    
T  48801698 aaatatggtttatgatagaacattaca-cataatttgatccatgtagctgatcccacttag 48801639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 50257767 - 50257835
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||||| |  ||| ||||| ||||||||  || |||||||||| |||||    
T  50257767 aaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaaccccacttagtgagataa 50257835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 13827983 - 13827948
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttg 185  Q
    |||||||||||||||||| |||||||||||||||||    
T  13827983 tagaaaagatggtggaaactagggttaggtggtttg 13827948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 26113521 - 26113438
Alignment:
Q  299 tatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||| || ||| ||||| |||||||| ||   ||||||||| ||||| |||  |||||| |||||    
T  26113521 tatggtttatgatagaacattatggcttaatttgatccatgtagccgagctcacttagtgggataagactacattgttgttgtt 26113438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 28511882 - 28511819
Alignment:
Q  300 atggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgata 363  Q
    |||||||||||||||||||||| || ||| |||||  ||||||| ||| |||||||||| ||||    
T  28511882 atggtttatgatagaacattatggcgtaatttgatcaatgtagccgaccccacttagtgggata 28511819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 37294186 - 37294131
Alignment:
Q  303 gtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||||||||||||||||| || ||| ||||| |||||||||||| ||| ||||||    
T  37294186 gtttatgatagaacattatggcgtaatttgatccatgtagctgaccccatttagtg 37294131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 43375684 - 43375597
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||| |||||||||||||||  ||||| ||||| ||||||||  |  |||||||||| ||||||  ||| ||||| |||||    
T  43375684 gaaatatggttcatgatagaacattatgacataatttgatccatgtagccaatcccacttagtgggataaagattggttgttgttgtt 43375597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 4707305 - 4707220
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| ||||||||||||||||| ||| || ||| |||| ||||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  4707305 aaatttggtttatgatagaacactatggcgtaatttga-tcatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 4707220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 32404789 - 32404712
Alignment:
Q  153 aaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    ||||||||||||||| |||| ||||||||||||| |||||   |||||||  |||||||||| ||| || ||||||||    
T  32404789 aaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagattctatagtaaggagagtag 32404712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 39318326 - 39318411
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || ||| ||||| |||||||| ||| || ||||||| |||||  |||| ||||| |||||    
T  39318326 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgac-ccgcttagtgggataaggcttgtttgttgttgtt 39318411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 41612003 - 41612087
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||| ||||||||||||| ||||| || | ||||||| ||| | ||||||||||  |||| ||||||||||| |||||    
T  41612003 aaatatggtttatcatagaacattata-cataatttaactcatgtaactg-ccccacttagtgaaataatacttgattgttattgtt 41612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 43599056 - 43599010
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattgtt 376  Q
    |||||||||||||||||| ||||||| || ||||||||||| |||||    
T  43599056 ttgattcatgtagctgaccccacttactgggataaaacttggttgtt 43599010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 9599477 - 9599428
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagctgac 347  Q
    ||||||||||||||||||| |||| || ||| ||||| ||||||||||||    
T  9599477 atatggtttatgatagaacgttatggcgtaatttgatccatgtagctgac 9599428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 40568495 - 40568410
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||| | ||| || ||| ||||| ||||||||  || |||||||||| |||||  |||| ||||| ||||    
T  40568495 aaatatggtttatgatagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgt 40568410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 43423735 - 43423803
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtag 216  Q
    |||||||||||||||||| |||| |||||||||||||  ||||   ||||||| ||||||||| |||||    
T  43423735 tagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtag 43423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 46388388 - 46388472
Alignment:
Q  146 ataatagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    |||||||||||||||||||||| | || |||||| |||||   ||||   ||||||| ||||||||||||||| || ||||||||    
T  46388388 ataatagaaaagatggtggaaactcggcttaggtagtttgcacatgtagagagaagacttgtagattctgtagtaaggagagtag 46388472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 3819122 - 3819031
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttga--gaagaattgtagattctgtagcaaagagagtagttctgatggag 239  Q
    ||||||||||||||| || |||  ||| |||||||||| |||| ||  ||||| |||| |||||| ||| ||||||||||| || |||||||    
T  3819122 tagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagagagtagatcagatggag 3819031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 32404607 - 32404543
Alignment:
Q  300 atggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||| ||||| || || ||| ||||| |||||||| ||| |||||||||| |||||    
T  32404607 atggtttatgatataacataatggcgtaatttgatccatgtagccgaccccacttagtgggataa 32404543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 36339891 - 36339827
Alignment:
Q  294 agaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||| |||||| |||||| ||||||||    ||| ||||| |||||||||||||||||||||||    
T  36339891 agaaacatggttaatgataaaacattatgaagtaatttgatccatgtagctgactccacttagtg 36339827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 38868897 - 38868945
Alignment:
Q  149 atagaaaagatggtggaaattagggttaggtggtttgggtatgttgaga 197  Q
    ||||||||||||||||||| | || |||||||||||||| |||| ||||    
T  38868897 atagaaaagatggtggaaactcggcttaggtggtttgggcatgtagaga 38868945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 296 - 384
Target Start/End: Complemental strand, 51440850 - 51440762
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtttc 384  Q
    |||| |||| |||||||||||| ||  || | | |||||||||||| | ||| |||||||||| ||||| ||||| ||||| |||||||    
T  51440850 aaatttggtgtatgatagaacactacggcgtcatttgattcatgtaaccgaccccacttagtgggataagacttggttgttgttgtttc 51440762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 45486933 - 45486848
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||| | | |||||||||| |||||| |||| ||||| |||||    
T  45486933 aatatggtttatgatagaacattatggcataatttgatccatgtagccggccccacttagtgggataaagcttggttgttgttgtt 45486848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 300 - 381
Target Start/End: Complemental strand, 48734228 - 48734147
Alignment:
Q  300 atggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    |||||||||||||||||||||| || ||| ||||| |||||||||||| |||||||||| |||||  |||||||||| ||||    
T  48734228 atggtttatgatagaacattatggcgtaagttgatccatgtagctgaccccacttagtgggataaggcttgattgttgttgt 48734147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 40991628 - 40991702
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    |||||||||||||||||||||||||| |  ||| ||||| |||||||||||| |||||||||| ||||| |||||    
T  40991628 aaatatggtttatgatagaacattatggtgtaatttgatccatgtagctgaccccacttagtgagataagacttg 40991702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 54128576 - 54128662
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||  ||| |||||||||| |||||  |||| ||||| |||||    
T  54128576 aaatatggtttatgatagaacattatggcataatttgatccatgtaggcgaccccacttagtgggataaggcttggttgttgttgtt 54128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 32170597 - 32170682
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgtt 376  Q
    |||||||||||||| ||||||| ||||||||  ||||| ||||| |||||||| ||| |||||||||| |||||| |||| |||||    
T  32170597 gatagaaatatggtctatgatataacattatgacataatttgatccatgtagccgaccccacttagtgagataaagcttggttgtt 32170682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 45289176 - 45289091
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| ||  || |||||||||| |||||  |||| ||||| ||||    
T  45289176 aaatatggtttatgatagaacattatagcataatttgatccatgtcgccaaccccacttagtgggataaggcttggttgttgttgt 45289091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 21200564 - 21200695
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||||||||||||||| |||  |||||||||||||| ||||   |||||||  ||||||||||| || || |||||||| ||  ||||||| ||||||    
T  21200564 tagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatcacatggagagtagtca 21200663  T
Q  248 aataactatttagagaggaagaccaagaaaaa 279  Q
    ||| ||||    |||||||||||| |||||||    
T  21200664 aatcactagggggagaggaagacctagaaaaa 21200695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 14415342 - 14415260
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||||||| |||||||| |||||| |||| ||||||||| ||| |||||||||| ||||| ||||| ||||| ||||    
T  14415342 atatggtttatgatataacattatggcataatttga-tcatgtagccgaccccacttagtgggataagacttggttgttgttgt 14415260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 48508432 - 48508518
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  48508432 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 48508518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 49841812 - 49841869
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccac 352  Q
    |||||||||| |||||||||||||||| |||||| ||||| |||||||||||| ||||    
T  49841812 gaaatatggtatatgatagaacattatggcataatttgatccatgtagctgaccccac 49841869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 52927933 - 52927865
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||| || |||||||||| |||||| ||||| |||||||| ||| |||||||||| |||||    
T  52927933 aaatatggtttacgacagaacattatggcataatttgatccatgtagccgaccccacttagtgggataa 52927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 19758085 - 19758151
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||||||||||||||| | |||| ||||| |||||||| ||| |||||||||| |||||    
T  19758085 aatatggtttatgatagaacattatggtataatttgatccatgtagc-gaccccacttagtgggataa 19758151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 24541417 - 24541340
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgatt 373  Q
    |||||||||||| ||||||||||||| || ||| ||||| |||||| | ||| |||||||||| |||||  |||||||    
T  24541417 aaatatggtttaggatagaacattatggcgtaatttgatccatgtacccgaccccacttagtgggataaggcttgatt 24541340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 38060911 - 38060996
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||||||||||||||  || || ||| ||||| |||||||| ||| |||||||||| ||||| | ||| ||||| ||||    
T  38060911 aaatatggtttatgatagaacaccatggcgtaatttgatccatgtagccgaccccacttagtgggataagaattggttgttgttgt 38060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 40106705 - 40106620
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||||||||||||||||||  ||||| |||||  ||||||  ||| |||||||||| |||||  |||| ||||| ||||    
T  40106705 aaatatggtttatgatagaacattatgacataatttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttgt 40106620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 42510280 - 42510183
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    |||||||||| ||||||| |||| |||||||||||||  |||| |||||||  | |||||| ||| | || |||||||| || ||||||| |||||||    
T  42510280 tagaaaagatagtggaaaataggcttaggtggtttggacatgtagagaagacctatagattttgtggtaaggagagtagatcagatggaggatagtca 42510183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 40122618 - 40122690
Alignment:
Q  303 gtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgt 375  Q
    ||||||||| |||||||||  | ||||||||| |||||||| ||| |||||||||  ||||||||||| ||||    
T  40122618 gtttatgattgaacattatgacttaacttgatccatgtagccgaccccacttagttggataaaacttggttgt 40122690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 41842777 - 41842678
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    ||||||||||||||||||  ||  |||||||||||||||||||   |||||||   ||||||||||||| || |||||||| ||  |||||| |||||||    
T  41842777 tagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaagagcggtagattctgtagtaatgagagtagatcaaatggaggatagtca 41842678  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 370
Target Start/End: Complemental strand, 42026627 - 42026547
Alignment:
Q  290 agatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    ||||||||||||||| |||||||||||||||| || | | ||||||||| |||| ||| |||| || || ||||| |||||    
T  42026627 agatagaaatatggtatatgatagaacattatggcgttatttgattcatttagccgaccccacatactgtgataagacttg 42026547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 42510101 - 42510041
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttag 356  Q
    |||||||||||||||| ||||||||| || ||| ||||| |||||||| ||| ||||||||    
T  42510101 aaatatggtttatgattgaacattatggcgtaatttgatccatgtagccgaccccacttag 42510041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 19737182 - 19737248
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||| |||||||| | |||| ||||| |||||||| ||| |||||||||| |||||    
T  19737182 aatatggtttatgataaaacattatggtataatttgatccatgtagc-gaccccacttagtgggataa 19737248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 29601089 - 29601156
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgata 363  Q
    |||||| |||||||||||||||||||    ||| ||||| |||||||||||| |||||||||| ||||    
T  29601089 aaatatagtttatgatagaacattatgatgtaatttgatccatgtagctgaccccacttagtgggata 29601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 45374559 - 45374476
Alignment:
Q  299 tatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||  ||||||||||||| || ||| || || |||||||||||| |||||||||| |||||  |||| ||||| |||||    
T  45374559 tatggtttcggatagaacattatggcgtaatttaatccatgtagctgaccccacttagtgggataaggcttggttgttgttgtt 45374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 46148232 - 46148287
Alignment:
Q  303 gtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||||||||||||||||| || ||| ||||| |||||||| ||| ||||||||||    
T  46148232 gtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtg 46148287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 22269 - 22355
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||| |||||||||| ||| || | | |||||  ||||||| ||| |||||||||| |||||| |||| ||||| |||||    
T  22269 aaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgtt 22355  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 5169029 - 5169115
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||| |||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  5169029 aaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 5169115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 19676166 - 19676080
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||| | ||||||||| |||||| || | | ||||| |||||||||||| |||||||||| |||||  |||| ||||| |||||    
T  19676166 aaatatgctgtatgatagagcattatggcgtgatttgatccatgtagctgaccccacttagtgggataaggcttggttgttattgtt 19676080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 45289357 - 45289260
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagt 245  Q
    |||||||||||||||||| |||| |||||||||||||| | ||   ||||| | ||||||||| ||||| ||  ||||||| || ||||||| |||||    
T  45289357 tagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatggaggatagt 45289260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 11581458 - 11581507
Alignment:
Q  148 aatagaaaagatggtggaaattagggttaggtggtttgggtatgttgaga 197  Q
    ||||||||||||||| |||| |||  ||||||||||||||||||| ||||    
T  11581458 aatagaaaagatggtagaaactagacttaggtggtttgggtatgtagaga 11581507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 25191574 - 25191659
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||| |||||||||| ||| || | | ||||| |||||||||||  |||||||||| |||||  |||| ||||| ||||    
T  25191574 aaatatggtttttgatagaacactatggcgtcatttgatccatgtagctgatcccacttagtgggataatgcttggttgttgttgt 25191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 36304163 - 36304220
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccact 353  Q
    |||||||||||||||||| ||||||| || ||| ||||| |||||||| ||| |||||    
T  36304163 aaatatggtttatgataggacattatggcgtaatttgatccatgtagccgaccccact 36304220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 38850318 - 38850391
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaactt 369  Q
    |||| ||||||||||||||||| |||  | ||| ||||| |||||||| ||| |||||||||  ||||||||||    
T  38850318 aaatttggtttatgatagaacactatgacgtaatttgatccatgtagccgaccccacttagtaggataaaactt 38850391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 40116424 - 40116355
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||||||||||||||||| || ||| ||||| || ||||| |||  | ||||||| |||||    
T  40116424 gaaatatggtttatgatagaacattatggcgtaatttgatccacgtagccgacctcgcttagtgggataa 40116355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 46431915 - 46431834
Alignment:
Q  174 ttaggtggtttgggtatgttgagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtcaaataacta 255  Q
    |||||||||||||| |||| |||| ||  |||||||||||||| || |||||||| |  ||||||| ||| |||||| ||||    
T  46431915 ttaggtggtttgggcatgtagagaggatctgtagattctgtagtaaggagagtagataagatggaggatactcaaatcacta 46431834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 47233681 - 47233596
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||| |||||||||| ||| || | | |||||||||||||| ||| ||| |||||| |||||  |||| ||||| ||||    
T  47233681 aaatatggtttttgatagaacactatggcgtcatttgattcatgtagccgaccccagttagtgggataaggcttggttgttgttgt 47233596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 39600947 - 39600848
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgtt--gagaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    ||||||||||||||||||  | | ||||||||||| || ||||   |||||||  ||||||||||||||| | |||||||| || ||| ||| |||||||    
T  39600947 tagaaaagatggtggaaaacaagcttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcagatcgaggatagtca 39600848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 52156169 - 52156101
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||| ||| || | |  |||| |||||||| ||| |||||||||| |||||    
T  52156169 aaatatggtttatgatagaacactatggcgtcatctgatccatgtagccgaccccacttagtgggataa 52156101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 54128394 - 54128442
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttgagaa 198  Q
    ||||||||||||| |||| |||| |||||||||||||| |||| |||||    
T  54128394 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaa 54128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 18959108 - 18959176
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||| |||||||||||||||| |||||| ||||| |||||||||||| |||||||||| |||||    
T  18959108 aaatatggtctatgatagaacattatggcataatttgatccatgtagctgaccccacttagtgggataa 18959176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 382
Target Start/End: Original strand, 19863432 - 19863517
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||| |||| | ||||| |||||||| | | |||||||||| |||||| |||| ||||| |||||    
T  19863432 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttggttgttgttgtt 19863517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 382
Target Start/End: Original strand, 19867764 - 19867849
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||| |||| | ||||| |||||||| | | |||||||||| |||||| |||| ||||| |||||    
T  19867764 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttggttgttgttgtt 19867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 382
Target Start/End: Original strand, 19872665 - 19872750
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||||||||||||||||| |||| | ||||| |||||||| | | |||||||||| |||||| |||| ||||| |||||    
T  19872665 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttggttgttgttgtt 19872750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 3481349 - 3481412
Alignment:
Q  294 agaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    ||||||||||| |||||||||||||||| || ||| ||||| |||||||||||| |||||||||    
T  3481349 agaaatatggtctatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagt 3481412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 9531685 - 9531599
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||| ||||||||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  9531685 aaatatggtttatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 9531599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 17429251 - 17429332
Alignment:
Q  300 atggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||| ||||||||||||||||  ||||| |||||||||||||| ||| |||||||||| |||||  |||| ||||| ||||    
T  17429251 atggtatatgatagaacattatgacataatttgattcatgtagccgaccccacttagtgagataaggcttggttgttgttgt 17429332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 31959718 - 31959779
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    |||||||||||||||||||||| ||| |||||| ||||| |||||||| ||| |||||||||    
T  31959718 aaatatggtttatgatagaacactatggcataatttgatccatgtagcagaccccacttagt 31959779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 42549917 - 42549836
Alignment:
Q  301 tggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||| || || ||| ||||||||||||||  || |||||||||| |||||| |||| ||||| |||||    
T  42549917 tggtttatgatagaacatcatggcgtaatttgattcatgtagccaaccccacttagtgggataaagcttggttgttgttgtt 42549836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 376
Target Start/End: Original strand, 45077925 - 45078006
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgtt 376  Q
    ||||||| |||||||||||||||| || |||||| ||||| |||||| | ||| |||||||||| |||||| |||| |||||    
T  45077925 gaaatatagtttatgatagaacataatggcataatttgatccatgtaaccgaccccacttagtgagataaagcttggttgtt 45078006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 33287612 - 33287704
Alignment:
Q  290 agatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||| | ||||||  ||||||||||||| || || ||||| ||||| |||||    
T  33287612 agatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaactccacttagtgggacaagacttggttgttgttgtt 33287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 42149750 - 42149703
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcat 338  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||    
T  42149750 gatagaaatatggtttatgatagaacattatggcgtaatttgattcat 42149703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 9496063 - 9496125
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||||||||||||||||||||| || ||| ||||| ||||||||  || ||||||||||    
T  9496063 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaaccccacttagtg 9496125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 3481156 - 3481256
Alignment:
Q  149 atagaaaagatggtggaaattagggttaggtggtttgggtatgttgaga--agaattgtagattctgtagcaaagagagtagttctgatggagaatagtc 246  Q
    |||| ||||||||||||||  ||| |||||||||||||  |||| ||||  |||  | ||||||||||||||| |||||||| || ||||||| ||||||    
T  3481156 atagtaaagatggtggaaaacaggcttaggtggtttggacatgtagagagaagacctatagattctgtagcaaggagagtagatcagatggaggatagtc 3481255  T
Q  247 a 247  Q
    |    
T  3481256 a 3481256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 12520146 - 12520061
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||| |||| ||| || ||| ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  12520146 aatatggtttatgataaaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 12520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 13241011 - 13240931
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgt--tgagaagaattgtagattctgtagcaaagagagtag 228  Q
    |||||||||||||||||| |||| |||||||||||||| ||||   |||||||  |||||||||| ||| || ||||||||    
T  13241011 tagaaaagatggtggaaactaggcttaggtggtttgggcatgtagagagaagacatgtagattctttagtaaggagagtag 13240931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 19336979 - 19336898
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgtt 376  Q
    ||||||||||||||||||||||||||| || ||| ||||| ||||||||  |  ||||||| || |||||| |||| |||||    
T  19336979 gaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaatcccacttattgggataaagcttggttgtt 19336898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 33504420 - 33504489
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||| |||||||||||||||| || ||| ||||| ||| |||| ||| |||||||||| |||||    
T  33504420 gaaatatggtatatgatagaacattatggcgtaatttgatccatctagccgaccccacttagtgggataa 33504489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 9556452 - 9556392
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||||||||||||||||||||  |  ||| ||||| |||||||| ||||||||||||||    
T  9556452 atatggtttatgatagaacattagggtgtaatttgatacatgtagccgactccacttagtg 9556392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 41778688 - 41778624
Alignment:
Q  306 tatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    ||||||||||||||||  ||| | ||||||||||| ||||||  ||||||||| |||||||||||    
T  41778688 tatgatagaacattatgacatcatttgattcatgttgctgacctcacttagtgggataaaacttg 41778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 45543158 - 45543090
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||||||||||||||| || ||  |||||  ||||||| ||| |||||||||| |||||    
T  45543158 aaatatggtttatgatagaacattatggcgtactttgatctatgtagccgaccccacttagtgggataa 45543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 440924 - 440987
Alignment:
Q  307 atgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    |||||| |||||||| || ||| ||||| ||||||||||||||||||||| | ||||| |||||    
T  440924 atgatacaacattatggcgtaatttgatccatgtagctgactccacttagagggataagacttg 440987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 3720501 - 3720438
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||| |||||||||||||||||||||| |  ||| ||||| |||||||| ||| ||||||||||    
T  3720501 gaaaaatggtttatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtg 3720438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 12141560 - 12141662
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgggtatgttg--agaagaattgtagattctgtagcaaagagagtagttctgatggagaatagtca 247  Q
    ||||||||||||||||||  ||| |||||||||||||| | || |  ||||||  |||||||||| ||| || |||||||| || ||| ||| |||||||    
T  12141560 tagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagacctgtagattctctagtaaggagagtagatcagattgaggatagtca 12141659  T
Q  248 aat 250  Q
    |||    
T  12141660 aat 12141662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Original strand, 28508875 - 28508962
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    |||| ||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| ||||||    
T  28508875 aaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttt 28508962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Complemental strand, 39709286 - 39709219
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgata 363  Q
    |||||||||||||||| ||||| ||| || ||| ||||| |||||||| ||| |||||||||| ||||    
T  39709286 aaatatggtttatgattgaacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 39709219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 3635408 - 3635322
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||||| |||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  3635408 aaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 3635322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 11992193 - 11992131
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||||| ||| |||||||||||||| || | | ||||| |||||||||||| ||||||||||    
T  11992193 aaatatgatttttgatagaacattatggcgttatttgatccatgtagctgaccccacttagtg 11992131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 12734897 - 12734983
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| |  ||| ||||| |||||||  ||| |||||||||| |||||  |||| ||||| |||||    
T  12734897 aaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgtt 12734983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 25834875 - 25834961
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| | | || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  25834875 aaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25834961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 30306229 - 30306315
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||| ||||||||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||| ||||| |||||    
T  30306229 aaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 30306315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 32443833 - 32443895
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||| |||||| | | |||||||| |||||| ||||| |||||||| ||||||||||||||    
T  32443833 aaatatagtttataacaaaacattatggcataatttgatccatgtagccgactccacttagtg 32443895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 36650639 - 36650701
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    |||||| ||||||||||||||| |||| | ||| ||||| | |||||||||||||| ||||||    
T  36650639 aaatatagtttatgatagaacactataacgtaatttgatccgtgtagctgactccatttagtg 36650701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 34931631 - 34931676
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagc 343  Q
    |||||||||||||||||||||||| |||||| ||||| ||| ||||    
T  34931631 atatggtttatgatagaacattatggcataatttgatccatatagc 34931676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 887138 - 887082
Alignment:
Q  308 tgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||| || ||| ||||| |||||||||||| |||||| ||| |||||    
T  887138 tgatagaacattatggcgtaatttgatccatgtagctgaccccacttggtgggataa 887082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 6219161 - 6219209
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagc 343  Q
    ||||||||||||||||||||||||||| |  ||| ||||| ||||||||    
T  6219161 gaaatatggtttatgatagaacattatggtgtaatttgatccatgtagc 6219209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 9996711 - 9996651
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttag 356  Q
    ||||||||||||||||  |||| ||| |||||| ||||| |||||||| ||| ||||||||    
T  9996711 aaatatggtttatgattaaacactatggcataatttgatccatgtagccgaccccacttag 9996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 13474298 - 13474214
Alignment:
Q  297 aatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||||||||  ||||||| |||||| |||||  ||  ||  |||||||||||||| ||||| ||||| ||||| ||||    
T  13474298 aatatggtttatgataatacattatggcataatttgatctattgagtcgactccacttagtgggataagacttggttgttgttgt 13474214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 18958923 - 18958959
Alignment:
Q  150 tagaaaagatggtggaaattagggttaggtggtttgg 186  Q
    |||||||||||||||||| |||| |||||||||||||    
T  18958923 tagaaaagatggtggaaaataggcttaggtggtttgg 18958959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 38430081 - 38430149
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||| |||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||    
T  38430081 aaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgagataa 38430149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 6862 - 6789
Alignment:
Q  291 gatagaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    |||||||||||||| ||||||| |||||||| |||||| ||||| ||||||||  || |||||||||| |||||    
T  6862 gatagaaatatggtatatgatataacattatggcataatttgatccatgtagccaaccccacttagtgggataa 6789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 160410 - 160347
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtg 358  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||||||  || ||||||||||    
T  160410 gaaatatggtttatgatagaacattatggcgtaatttgaatcatgtagccaaccccacttagtg 160347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 16521 - 16464
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccact 353  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| || ||| |||||    
T  16521 aaatatggtttatgatagaacattatggcataatttgatccatgtggccgaccccact 16464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 48201 - 48140
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagt 357  Q
    ||||||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||||||||    
T  48201 aaatatggtgtatgatagaatattatggcgtaatttgatccatgtagccgactccacttagt 48140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1858 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1858
Description:

Target: scaffold1858; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 961 - 887
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttg 370  Q
    |||||||||||||| ||| |||||||| |||||| ||| |||| ||||| ||| |||||||||| ||||| |||||    
T  961 gaaatatggtttataataaaacattatggcataatttg-ttcaggtagccgaccccacttagtgggataacacttg 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Original strand, 528 - 615
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgttt 383  Q
    |||| |||| |||||||||||| ||| || | | ||||| |||||||| ||| |||||||||| |||||  |||||||||| ||||||    
T  528 aaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgttgttt 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 4833 - 4919
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||||||||| ||| || ||| ||||| | |||||| ||| |||||| ||| |||||  |||| ||||| |||||    
T  4833 aaatatggtttatgatagaacactatggcgtaatttgatccgtgtagccgaccccactttgtgggataacgcttggttgttgttgtt 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 14780 - 14866
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    |||||||||||||||| ||||| ||| || ||| ||||| ||||||||  || |||| ||||| |||||| |||| ||||| |||||    
T  14780 aaatatggtttatgattgaacactatggcgtaatttgatccatgtagccaaccccacgtagtgggataaatcttggttgttgttgtt 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 58309 - 58243
Alignment:
Q  298 atatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||||||||||||||||||  | ||| ||||| |||||||| ||| | |||||||| |||||    
T  58309 atatggtttatgatagaacattatgtcgtaatttgatccatgtagccgacccaacttagtgggataa 58243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 16775 - 16860
Alignment:
Q  296 aaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgt 381  Q
    ||||||||||| |||||||||| ||| || | | |||||  ||||||| |||||||||||||| |||||  |||| ||||| ||||    
T  16775 aaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgactccacttagtgggataaggcttggttgttgttgt 16860  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 66734 - 66803
Alignment:
Q  295 gaaatatggtttatgatagaacattatagcataacttgattcatgtagctgactccacttagtgcgataa 364  Q
    ||||||||| ||||||||||||||||| || ||| ||||||||| || || || |||||| ||| |||||    
T  66734 gaaatatggcttatgatagaacattatggcgtaatttgattcatataactaaccccacttggtgggataa 66803  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 163245 - 163193
Alignment:
Q  330 ttgattcatgtagctgactccacttagtgcgataaaacttgattgttcttgtt 382  Q
    ||||||||| |||| ||||||| ||||||  |||||||||||||||| |||||    
T  163245 ttgattcatatagccgactccatttagtggaataaaacttgattgttgttgtt 163193  T

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