View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4532-Insertion-18 (Length: 103)
Name: NF4532-Insertion-18
Description: NF4532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4532-Insertion-18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 72; Significance: 3e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 29118641 - 29118548
Alignment:
| Q |
8 |
ataattgagatctagtaacacttaaaattgttgctaaaccaagaagaatgttactaaacacactgttacaaaagagttttaagtcacactttacag |
103 |
Q |
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| T |
29118641 |
ataattgagatctagtaacacttaaaattgttgctaaaccaagaagaatgttactaaacacgct-atacaaaagag-tttaagtcacactttacag |
29118548 |
T |
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Target: chr7 (Bit Score: 35; Significance: 0.00000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 26619214 - 26619160
Alignment:
| Q |
8 |
ataattgagatctagtaacacttaaaattgttgctaaaccaagaagaatgttact |
62 |
Q |
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| T |
26619214 |
ataattgacatctagtaacacttgaaattgttactaaatcaagaaaaatgttact |
26619160 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 30089722 - 30089778
Alignment:
| Q |
7 |
aataattgagatctagtaacactt-aaaattgttgctaaaccaagaagaatgttact |
62 |
Q |
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| T |
30089722 |
aataattgacatctagtaacacttgaaaactgttactaaatcaagaaaaatgttact |
30089778 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 31571017 - 31571072
Alignment:
| Q |
8 |
ataattgagatctagtaacactt-aaaattgttgctaaaccaagaagaatgttact |
62 |
Q |
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|||||||| |||||||||||||| ||||||||| |||| |||||| ||||||||| |
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| T |
31571017 |
ataattgacatctagtaacacttgaaaattgttattaaaacaagaaaaatgttact |
31571072 |
T |
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