View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4533-Insertion-2 (Length: 482)
Name: NF4533-Insertion-2
Description: NF4533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4533-Insertion-2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 459; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 8 - 482
Target Start/End: Complemental strand, 33036903 - 33036429
Alignment:
| Q |
8 |
gcaatgccatgaacctaatacatctgacccaattatcctcatgattgtccaacaagcaagctcattaagagagtctgaggtgaccacctcgtcgtagagt |
107 |
Q |
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| T |
33036903 |
gcaatgccatgaacctaatacatctgacccaattatcctcatgattgtccaacaagcaagctcattaagagagtctgaggtgaccacctcgtcgtagagt |
33036804 |
T |
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| Q |
108 |
atagtgcagtaaaggatcgtgcctcctacatcatctcaagaagcatcacttctaggattcctacatgtagcacaaaactatgcaccctgcattgtttgag |
207 |
Q |
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| T |
33036803 |
atagtgcagtaaaggatcgtgcctcctacctcatctcaagaagcatcacttctaggattcctacatgtagcacaaaactatgcaccctgcattgtttgag |
33036704 |
T |
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| Q |
208 |
ggacaacctcgtttccataacttgaaagaaccaagcaccaacatgttccactgtcttagcacatacatactatcaaatcattaatgggatgctattacta |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036703 |
ggacaacctcgtttccataacttgaaagaaccaagcaccaacatgttccactgtcttagcacatacatactatcaaatcattaatgggatgctattacta |
33036604 |
T |
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| Q |
308 |
ataaagagcttatgtgaattggataggtgcatttgtttatctcaaaatcaattactataaacaaacattatttatttgtaactaaccgaaccagatggca |
407 |
Q |
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||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036603 |
ataaaaagcttatgtgaattagataggtgcatttgtttatctcaaaatcaattactataaacaaacattatttatttgtaactaaccgaaccagatggca |
33036504 |
T |
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| Q |
408 |
agaggaaaaacaagaacaacaaggagtgtatcatttgaatgtatccctataagtacaacttctcccataggtatg |
482 |
Q |
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| T |
33036503 |
agaggaaaaacaagaacaacaaggagtgtatcatttgaatgtatcactataagtacaacttctcccataggtatg |
33036429 |
T |
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