View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4533-Insertion-5 (Length: 204)
Name: NF4533-Insertion-5
Description: NF4533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4533-Insertion-5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 48541539 - 48541736
Alignment:
| Q |
8 |
catcttccccccacaatacgagaacttcctggatatgtacgagtaatgtaaattaatctgctgttgaagtacacatttaatttactcgtacggttgcaca |
107 |
Q |
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| T |
48541539 |
catcttccccccacaatacgagaacttcctggatatgtatgagtaatgtaaattaatcagctgttgaagtacacatttaatttactcgtacggttgcaca |
48541638 |
T |
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| Q |
108 |
tttag-ttacctgttgaagaggtgaaatgtttgaagtatcaacctttcctatggacaatccatttagaagctccatcttttccttcctattatctgag |
204 |
Q |
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| T |
48541639 |
tttagtttacctgttgaagaggtgaaatgtttgaagtatcaacctttcctatggacaatccatttagaagctccatcttttccttcctattatctgag |
48541736 |
T |
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