View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4533_high_3 (Length: 561)

Name: NF4533_high_3
Description: NF4533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4533_high_3
NF4533_high_3
[»] chr4 (36 HSPs)
chr4 (408-530)||(44638929-44639051)
chr4 (131-275)||(44640387-44640543)
chr4 (277-336)||(44639130-44639190)
chr4 (190-247)||(9948021-9948078)
chr4 (190-249)||(21202829-21202888)
chr4 (190-249)||(42772878-42772937)
chr4 (190-249)||(20802468-20802527)
chr4 (190-249)||(37865843-37865902)
chr4 (190-249)||(42870061-42870120)
chr4 (189-247)||(52949812-52949870)
chr4 (190-247)||(11056134-11056191)
chr4 (190-247)||(44649101-44649158)
chr4 (190-247)||(50178429-50178486)
chr4 (190-249)||(2629888-2629947)
chr4 (190-249)||(4325881-4325940)
chr4 (277-328)||(11987263-11987314)
chr4 (190-245)||(20517959-20518014)
chr4 (277-328)||(22008021-22008072)
chr4 (190-249)||(24210409-24210468)
chr4 (277-328)||(24977201-24977252)
chr4 (190-249)||(33176969-33177028)
chr4 (190-249)||(36497307-36497366)
chr4 (190-249)||(36886022-36886081)
chr4 (190-249)||(38812610-38812669)
chr4 (190-249)||(46680447-46680506)
chr4 (190-249)||(50727850-50727909)
chr4 (190-249)||(50735864-50735923)
chr4 (190-249)||(55593975-55594034)
chr4 (304-334)||(42245946-42245976)
chr4 (16-54)||(44640622-44640660)
chr4 (190-247)||(44324279-44324336)
chr4 (190-247)||(47642428-47642485)
chr4 (190-247)||(50729479-50729536)
chr4 (305-334)||(50803253-50803282)
chr4 (190-249)||(29616255-29616315)
chr4 (209-245)||(45577645-45577681)
[»] chr3 (25 HSPs)
chr3 (190-275)||(3695245-3695330)
chr3 (277-328)||(49221143-49221194)
chr3 (190-247)||(41682991-41683048)
chr3 (190-246)||(34351306-34351362)
chr3 (277-331)||(1000658-1000712)
chr3 (190-247)||(31882960-31883017)
chr3 (190-247)||(33364716-33364773)
chr3 (277-326)||(45300929-45300978)
chr3 (190-249)||(2135158-2135217)
chr3 (190-249)||(12349109-12349168)
chr3 (190-249)||(24571369-24571428)
chr3 (190-249)||(25860359-25860418)
chr3 (277-328)||(27842986-27843037)
chr3 (190-249)||(29584963-29585022)
chr3 (209-244)||(36772111-36772146)
chr3 (190-245)||(50386394-50386449)
chr3 (190-249)||(51259718-51259777)
chr3 (277-328)||(52089546-52089597)
chr3 (304-334)||(3127550-3127580)
chr3 (190-244)||(22484681-22484735)
chr3 (277-331)||(26703764-26703818)
chr3 (190-247)||(26847417-26847474)
chr3 (283-328)||(38570806-38570851)
chr3 (275-328)||(43887107-43887160)
chr3 (190-247)||(51925146-51925203)
[»] chr8 (29 HSPs)
chr8 (190-249)||(5968823-5968882)
chr8 (277-331)||(5728734-5728788)
chr8 (190-247)||(10467153-10467210)
chr8 (190-246)||(22756370-22756426)
chr8 (190-249)||(8673014-8673073)
chr8 (190-249)||(14005003-14005062)
chr8 (190-249)||(17805778-17805837)
chr8 (275-330)||(34010724-34010779)
chr8 (190-249)||(37664242-37664301)
chr8 (196-249)||(7394779-7394832)
chr8 (190-247)||(7591406-7591463)
chr8 (190-247)||(10932824-10932881)
chr8 (190-247)||(22999347-22999404)
chr8 (277-334)||(25564069-25564126)
chr8 (278-331)||(36195648-36195701)
chr8 (190-247)||(37474789-37474846)
chr8 (190-247)||(41548707-41548764)
chr8 (190-249)||(27104046-27104105)
chr8 (190-249)||(29563185-29563244)
chr8 (194-249)||(29672286-29672341)
chr8 (190-249)||(30542981-30543040)
chr8 (190-249)||(34101595-34101654)
chr8 (277-331)||(25686962-25687016)
chr8 (190-247)||(5892157-5892214)
chr8 (277-334)||(8297976-8298033)
chr8 (210-247)||(10656665-10656702)
chr8 (190-247)||(15001555-15001612)
chr8 (190-247)||(29611014-29611071)
chr8 (190-246)||(30501235-30501291)
[»] chr1 (33 HSPs)
chr1 (190-249)||(41967868-41967927)
chr1 (190-247)||(47242535-47242592)
chr1 (190-246)||(2761575-2761631)
chr1 (190-249)||(844743-844802)
chr1 (190-249)||(6711065-6711124)
chr1 (190-245)||(7837233-7837288)
chr1 (190-249)||(16386950-16387009)
chr1 (190-249)||(28340322-28340381)
chr1 (277-328)||(28868402-28868453)
chr1 (190-249)||(39281990-39282049)
chr1 (190-249)||(51264591-51264650)
chr1 (277-327)||(37232746-37232796)
chr1 (190-247)||(42512789-42512846)
chr1 (190-247)||(50304749-50304806)
chr1 (190-246)||(16704825-16704881)
chr1 (277-328)||(7534339-7534390)
chr1 (190-249)||(12890334-12890393)
chr1 (190-249)||(16451223-16451282)
chr1 (190-249)||(17888044-17888103)
chr1 (190-249)||(24339657-24339716)
chr1 (190-249)||(32289363-32289422)
chr1 (277-328)||(41885116-41885167)
chr1 (277-328)||(43846418-43846469)
chr1 (277-334)||(33417555-33417613)
chr1 (190-247)||(6144005-6144062)
chr1 (190-247)||(6771466-6771523)
chr1 (305-334)||(10665043-10665072)
chr1 (277-318)||(30280813-30280854)
chr1 (277-334)||(33826349-33826406)
chr1 (277-334)||(33841558-33841615)
chr1 (277-334)||(44521050-44521107)
chr1 (190-246)||(4895460-4895516)
chr1 (193-249)||(7184014-7184070)
[»] chr7 (24 HSPs)
chr7 (190-249)||(21784962-21785021)
chr7 (190-246)||(35026363-35026419)
chr7 (190-249)||(3922648-3922707)
chr7 (190-249)||(16963229-16963288)
chr7 (190-249)||(36769514-36769573)
chr7 (190-249)||(41211145-41211204)
chr7 (190-249)||(44748786-44748845)
chr7 (190-247)||(38301435-38301492)
chr7 (277-328)||(9327975-9328026)
chr7 (190-249)||(10932502-10932561)
chr7 (190-249)||(26994170-26994229)
chr7 (190-249)||(40753246-40753305)
chr7 (190-249)||(43158631-43158690)
chr7 (190-249)||(47953281-47953340)
chr7 (190-244)||(18386620-18386674)
chr7 (190-247)||(329563-329620)
chr7 (277-330)||(2873785-2873838)
chr7 (277-334)||(21849299-21849356)
chr7 (275-328)||(29372515-29372568)
chr7 (277-318)||(32436536-32436577)
chr7 (190-247)||(48445614-48445671)
chr7 (277-321)||(13471595-13471639)
chr7 (189-249)||(30598952-30599012)
chr7 (190-246)||(37967068-37967124)
[»] chr2 (22 HSPs)
chr2 (190-249)||(7761517-7761576)
chr2 (190-249)||(5278778-5278837)
chr2 (190-249)||(9732874-9732933)
chr2 (190-249)||(35114872-35114931)
chr2 (190-249)||(42365664-42365723)
chr2 (190-249)||(44284716-44284775)
chr2 (190-227)||(83379-83416)
chr2 (190-247)||(32766448-32766505)
chr2 (190-250)||(3913404-3913464)
chr2 (277-328)||(5612797-5612848)
chr2 (277-328)||(6376668-6376719)
chr2 (190-249)||(7258984-7259043)
chr2 (190-249)||(18685923-18685982)
chr2 (190-249)||(32498002-32498061)
chr2 (190-249)||(33366697-33366756)
chr2 (190-249)||(34338897-34338956)
chr2 (190-249)||(37308742-37308801)
chr2 (190-249)||(42706446-42706505)
chr2 (277-331)||(39120145-39120199)
chr2 (190-247)||(38623248-38623305)
chr2 (190-247)||(41366054-41366111)
chr2 (190-246)||(15303184-15303240)
[»] chr6 (17 HSPs)
chr6 (190-246)||(3194878-3194933)
chr6 (190-249)||(3259770-3259829)
chr6 (190-249)||(10324094-10324153)
chr6 (190-249)||(24203449-24203508)
chr6 (190-249)||(34176917-34176976)
chr6 (190-246)||(9200370-9200427)
chr6 (190-249)||(166906-166965)
chr6 (190-249)||(11382149-11382208)
chr6 (190-249)||(15276920-15276979)
chr6 (190-249)||(15277263-15277322)
chr6 (190-249)||(17867922-17867981)
chr6 (190-249)||(17877705-17877764)
chr6 (190-249)||(32132363-32132422)
chr6 (190-244)||(32860143-32860197)
chr6 (190-247)||(3379799-3379856)
chr6 (190-231)||(27824636-27824677)
chr6 (190-247)||(35004111-35004168)
[»] scaffold0027 (1 HSPs)
scaffold0027 (190-249)||(15259-15318)
[»] chr5 (16 HSPs)
chr5 (190-249)||(34794974-34795033)
chr5 (190-249)||(35701364-35701423)
chr5 (277-330)||(27581819-27581872)
chr5 (190-249)||(553484-553543)
chr5 (190-249)||(2351767-2351826)
chr5 (190-249)||(4818090-4818149)
chr5 (190-249)||(7523259-7523318)
chr5 (190-249)||(11963428-11963487)
chr5 (190-249)||(21739111-21739170)
chr5 (190-249)||(23091254-23091313)
chr5 (191-249)||(8136924-8136982)
chr5 (210-244)||(24206463-24206497)
chr5 (190-247)||(18470378-18470435)
chr5 (277-330)||(20205858-20205911)
chr5 (210-247)||(35955088-35955125)
chr5 (190-246)||(4689648-4689704)
[»] scaffold0169 (1 HSPs)
scaffold0169 (190-249)||(18004-18063)
[»] scaffold0054 (1 HSPs)
scaffold0054 (190-249)||(23662-23721)
[»] scaffold0021 (1 HSPs)
scaffold0021 (208-246)||(108273-108311)
[»] scaffold0650 (1 HSPs)
scaffold0650 (190-247)||(1593-1650)
[»] scaffold0092 (1 HSPs)
scaffold0092 (305-334)||(38013-38042)


Alignment Details
Target: chr4 (Bit Score: 115; Significance: 4e-58; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 408 - 530
Target Start/End: Complemental strand, 44639051 - 44638929
Alignment:
Q  408 tcttatgatatgagtgatgacgaaactttgaaacaagtctctcatgttcgttattttgatgatttgtagatagatattcaccctacctactaatctttgt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  44639051 tcttatgatatgagtgatgacgaaactttgaaacaagtctctcatgttcgttattttcatgatttgtagatagatattcaccctacctactaatctttga 44638952  T
Q  508 gatatttttccacaagtcttatc 530  Q
    |||||||||||||||||||||||    
T  44638951 gatatttttccacaagtcttatc 44638929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 131 - 275
Target Start/End: Complemental strand, 44640543 - 44640387
Alignment:
Q  131 ataaactagtgtgcgtttgatctgctcaaaaatgactgacagag----caacttcagttgtaca--------tttgtaaaactgtttatgggacatgaca 218  Q
    ||||||||||||||||||||||| || |||||||| |||||||     ||||||||||||||||        ||||||||||||||||||| | ||||||    
T  44640543 ataaactagtgtgcgtttgatctactaaaaaatgaatgacagacagaacaacttcagttgtacagtgtttgatttgtaaaactgtttatggaaaatgaca 44640444  T
Q  219 aactagaggcaagagacaagacaaaaactcactaaactacagcacaacattttgtcc 275  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  44640443 aactagaggcaagagacaagacaaaaattcactaaactacaacacaacattttgtcc 44640387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 44639190 - 44639130
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaa-attttttaaagagaac 336  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  44639190 aaaagtagtgattgaaaactttataacaactaaaagttgaagaattttttttaaagagaac 44639130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 9948078 - 9948021
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||    
T  9948078 atttgtaaaactgtttaaggaacatgacaaacttgaggcaagagacatgacaaaaact 9948021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 21202888 - 21202829
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||| || ||| |||||||| ||||||||||||| ||||||||||||    
T  21202888 atttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactca 21202829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42772937 - 42772878
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||| |||||  || |||||||||||| ||||||||||||||||||||||||||    
T  42772937 atttgtaaaattgtttcaggtacatgacaaacttgaggcaagagacaagacaaaaactca 42772878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 20802468 - 20802527
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||||    
T  20802468 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactca 20802527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 37865902 - 37865843
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||| || ||||||||||||| ||||||||||||    
T  37865902 atttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaactca 37865843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42870120 - 42870061
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||||| ||| ||| |||||||| | ||||||||||| ||||||||||||    
T  42870120 atttgtaaaactgtttctggtacaggacaaactgggggcaagagacaggacaaaaactca 42870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 52949870 - 52949812
Alignment:
Q  189 catttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  52949870 catttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 52949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 11056191 - 11056134
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||    
T  11056191 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaact 11056134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 44649101 - 44649158
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  44649101 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 44649158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 50178429 - 50178486
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  50178429 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 50178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 2629888 - 2629947
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||  |||| ||||||||||||    
T  2629888 atttgtaaaactgtttcaggtacaggacaaactagaggcaaaggacatgacaaaaactca 2629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 4325940 - 4325881
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| || |||||||||    
T  4325940 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggagaaaaactca 4325881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 11987314 - 11987263
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||| ||||||||||  ||||||  ||||||||||||||||||||||||    
T  11987314 aaaagtaatgattgaaaaatttataaggactaaaagttgaagaaatttttta 11987263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 20517959 - 20518014
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaa 245  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||    
T  20517959 atttgtaaaactgtttcaggtacaagacaaactggaggcaagagacaggacaaaaa 20518014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 22008072 - 22008021
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  22008072 aaaagtagtgattgaaaattttatagggactaaaagttgaagaaatttttta 22008021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 24210468 - 24210409
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  24210468 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 24210409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 24977201 - 24977252
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  24977201 aaaagtagtgattgaaaattttatagggactaaaagttgaagaaatttttta 24977252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 33176969 - 33177028
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  33176969 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 33177028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 36497366 - 36497307
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| ||| ||||||||| ||||||||||||    
T  36497366 atttgtaaaactgtttcaggtacaggacaaactggagacaagagacaggacaaaaactca 36497307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 36886081 - 36886022
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  36886081 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactca 36886022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 38812669 - 38812610
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  38812669 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 38812610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 46680447 - 46680506
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  46680447 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 46680506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 50727850 - 50727909
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||||||  ||||||| |||| ||||||||||||    
T  50727850 atttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactca 50727909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 50735864 - 50735923
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||||||  ||||||| |||| ||||||||||||    
T  50735864 atttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactca 50735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 55594034 - 55593975
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||| ||||| |||||||| |||| ||||||||||||    
T  55594034 atttgtaaaactgtttcaggtacatgataaactggaggcaagggacaggacaaaaactca 55593975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 334
Target Start/End: Original strand, 42245946 - 42245976
Alignment:
Q  304 aactaaaagttgaagaaattttttaaagaga 334  Q
    |||||||||||||||||||||||||||||||    
T  42245946 aactaaaagttgaagaaattttttaaagaga 42245976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 44640660 - 44640622
Alignment:
Q  16 acatcatcttattttattataaattatgtttggatatgt 54  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  44640660 acatcatgttattttattataaactatgtttggatatgt 44640622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 44324279 - 44324336
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||||||||||| ||||  ||||||||||    
T  44324279 atttgtaaaactgtttcaggtacaggacaaactagaggcaaaagacgggacaaaaact 44324336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 47642428 - 47642485
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| |||| ||||||||||| |||||||    
T  47642428 atttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaact 47642485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 50729479 - 50729536
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  ||||||  ||||||| |||||||| |||| ||||||||||    
T  50729479 atttgtaaaactgtttcagggacagaacaaactggaggcaagggacatgacaaaaact 50729536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Complemental strand, 50803282 - 50803253
Alignment:
Q  305 actaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||||||||||||||    
T  50803282 actaaaagttgaagaaattttttaaagaga 50803253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 29616315 - 29616255
Alignment:
Q  190 atttgtaaaactgttt-atgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||||| | || ||| |||||||| |||||||| |||| ||||||||||||    
T  29616315 atttgtaaaactgtttcaaggtacaggacaaactggaggcaagggacaggacaaaaactca 29616255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 45577645 - 45577681
Alignment:
Q  209 ggacatgacaaactagaggcaagagacaagacaaaaa 245  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  45577645 ggacatgacaaactggaggcaagagacatgacaaaaa 45577681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 3695245 - 3695330
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactcactaaactacagcacaacattttgtcc 275  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| ||||||||||||| |||| ||| |||||| ||||||||    
T  3695245 atttgtaaaactgttttaggtacatgacaaactggaggcaagggacaggacaaaaactcaccaaaccacatcacaaccttttgtcc 3695330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 49221143 - 49221194
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  49221143 aaaagtagtgattgaaaattttataagaactaaaagttgaagaaatttttta 49221194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 41682991 - 41683048
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||||||||||||||    
T  41682991 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaagacaaaaact 41683048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 34351306 - 34351362
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||||||  |||||||||||||||||||| || ||||| |||||||||    
T  34351306 atttgtaaaactgtttcagggacatgacaaactagaggaaatagacacgacaaaaac 34351362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 1000712 - 1000658
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaag 331  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||  ||||||||    
T  1000712 aaaagtagtgattgaaaactttataagaactaaaagttgaaggaaaattttaaag 1000658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 31882960 - 31883017
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  31882960 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacacgacaaaaact 31883017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 33364716 - 33364773
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  33364716 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 33364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 45300978 - 45300929
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttt 326  Q
    |||||||||||||||||| ||||||  |||||||| ||||||||||||||    
T  45300978 aaaagtagtgattgaaaatattataggaactaaaaattgaagaaattttt 45300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 2135217 - 2135158
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| ||||  |||||||||||    
T  2135217 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacagaacaaaaactca 2135158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12349109 - 12349168
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  12349109 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 12349168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 24571428 - 24571369
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  24571428 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactca 24571369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 25860359 - 25860418
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  25860359 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactca 25860418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 27842986 - 27843037
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  ||||||  |||||||||||||||| |||||||    
T  27842986 aaaagtagtgattgaaaattttataaggactaaaagttgaagaactttttta 27843037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 29585022 - 29584963
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  29585022 atttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactca 29584963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 36772146 - 36772111
Alignment:
Q  209 ggacatgacaaactagaggcaagagacaagacaaaa 244  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36772146 ggacatgacaaactaaaggcaagagacaagacaaaa 36772111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 50386394 - 50386449
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaa 245  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||    
T  50386394 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacatgacaaaaa 50386449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 51259718 - 51259777
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  51259718 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 51259777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 52089546 - 52089597
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||   ||||| |||||||||| ||||||||||||||    
T  52089546 aaaagtagtgattgaaaattctataaaaactaaaagtcgaagaaatttttta 52089597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 334
Target Start/End: Complemental strand, 3127580 - 3127550
Alignment:
Q  304 aactaaaagttgaagaaattttttaaagaga 334  Q
    |||||||||||||||||||||||||||||||    
T  3127580 aactaaaagttgaagaaattttttaaagaga 3127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 22484681 - 22484735
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaa 244  Q
    ||||||||||| ||||  ||||||||||||||| |||||||| |||| |||||||    
T  22484681 atttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaa 22484735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 26703818 - 26703764
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaag 331  Q
    ||||||||||||||||||| ||||||  |||||||||||||| ||  ||||||||    
T  26703818 aaaagtagtgattgaaaactttataaggactaaaagttgaaggaaaattttaaag 26703764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 26847474 - 26847417
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||| | || || ||||| | ||||||||||||| ||||||||||    
T  26847474 atttgtaaaactgtttaagtgatataacaaattggaggcaagagacaggacaaaaact 26847417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 38570806 - 38570851
Alignment:
Q  283 agtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||  ||||||  ||||||||||||||||||||||||    
T  38570806 agtgattgaaaattttataaagactaaaagttgaagaaatttttta 38570851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 43887107 - 43887160
Alignment:
Q  275 caaaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||||  |||||   |||||||||||||||| |||||||    
T  43887107 caaaaagtagtgattgaaaattttatagggactaaaagttgaagaattttttta 43887160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 51925146 - 51925203
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || |||||||||||| |||||||  |||| ||||||||||    
T  51925146 atttgtaaaactgtttcaggtacatgacaaactggaggcaaaggacaggacaaaaact 51925203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 5968823 - 5968882
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||    
T  5968823 atttgtaaaactgtttaaggtacatgacaaactagaggcaagggacaggacaaaaactca 5968882  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 5728788 - 5728734
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaag 331  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  5728788 aaaagtagtgattgaaaattttataaggactaaaagttgaagaaattttttaaag 5728734  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 10467210 - 10467153
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||||||||||||||    
T  10467210 atttgtaaaactgttttaggtacaggacaaactggaggcaagagacaagacaaaaact 10467153  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 22756370 - 22756426
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    |||||||||||||||| ||||| | |||||| | |||||||||||||||||||||||    
T  22756370 atttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaac 22756426  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 8673014 - 8673073
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| ||||||||||||    
T  8673014 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactca 8673073  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 14005003 - 14005062
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  14005003 atttgtaaaactgtttgaggtacaggacaaactggaggcaagggacaagacaaaaactca 14005062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 17805837 - 17805778
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||   | ||| ||||||||||||||||| |||||||||||||||||    
T  17805837 atttgtaaaactgtttcaagtacaggacaaactagaggcaagggacaagacaaaaactca 17805778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 34010724 - 34010779
Alignment:
Q  275 caaaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaa 330  Q
    |||||||||| |||||||||  |||||| | |||||||||||||||||||||||||    
T  34010724 caaaaagtagcgattgaaaattttataaaagctaaaagttgaagaaattttttaaa 34010779  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 37664242 - 37664301
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  37664242 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 37664301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 7394779 - 7394832
Alignment:
Q  196 aaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||  || ||||||||||||||||||||| |||| ||||||||||||    
T  7394779 aaaactgtttcaggtacatgacaaactagaggcaagggacatgacaaaaactca 7394832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 7591406 - 7591463
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  7591406 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 7591463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 10932881 - 10932824
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||| ||||| ||||||||||||| |||||| ||||||||||||||| || |||||||    
T  10932881 atttataaaattgtttatgggacaagacaaagtagaggcaagagacatgataaaaact 10932824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 22999404 - 22999347
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  22999404 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 22999347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 25564069 - 25564126
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaagaga 334  Q
    |||||||||||||| |||  |||||   ||||||||||||||||||||||||||||||    
T  25564069 aaaagtagtgattggaaattttatagggactaaaagttgaagaaattttttaaagaga 25564126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 36195648 - 36195701
Alignment:
Q  278 aaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaag 331  Q
    |||||||||||||||||  ||||||  |||||||||||||||||| ||||||||    
T  36195648 aaagtagtgattgaaaattttataaggactaaaagttgaagaaatattttaaag 36195701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 37474846 - 37474789
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  37474846 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 37474789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 41548764 - 41548707
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  |  |||||||||||| ||||||||||||| ||||||||||    
T  41548764 atttgtaaaactgtttcagatacatgacaaactggaggcaagagacaggacaaaaact 41548707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 27104105 - 27104046
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  27104105 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactca 27104046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 29563185 - 29563244
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  29563185 atttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactca 29563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 29672286 - 29672341
Alignment:
Q  194 gtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  29672286 gtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 29672341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 30542981 - 30543040
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| |||||||  |||| ||||||||||||    
T  30542981 atttgtaaaactgtttcaggtacatgacaaactggaggcaatggacaggacaaaaactca 30543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34101654 - 34101595
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| ||||| |||||||||||    
T  34101654 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaacacaaaaactca 34101595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 25686962 - 25687016
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaag 331  Q
    ||||||||||||||||||  |||||   |||||||||||||||| ||||||||||    
T  25686962 aaaagtagtgattgaaaattttatagggactaaaagttgaagaatttttttaaag 25687016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 5892214 - 5892157
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||||||||||| |||  | |||||||||||||||| | | |||||||||||||||||    
T  5892214 atttgtaaaactattttagagacatgacaaactagacgaacgagacaagacaaaaact 5892157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 8298033 - 8297976
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaagaga 334  Q
    |||||| |||||||||||  |||||  ||||||||||  |||||||||||||||||||    
T  8298033 aaaagtggtgattgaaaaatttataggaactaaaagtcaaagaaattttttaaagaga 8297976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 10656665 - 10656702
Alignment:
Q  210 gacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  10656665 gacatgacaaactagaggcaaaagacaggacaaaaact 10656702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 15001612 - 15001555
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  |||||| |||||||| ||||||| |||||  |||||||||    
T  15001612 atttgtaaaactgtttcagggacaggacaaactggaggcaatagacagaacaaaaact 15001555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 29611014 - 29611071
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  ||||||  ||||||| |||||||| |||| ||||||||||    
T  29611014 atttgtaaaactgtttcagggacagaacaaactggaggcaagggacaggacaaaaact 29611071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 30501291 - 30501235
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| |||||||||    
T  30501291 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaac 30501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 9e-16; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 41967868 - 41967927
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||||||||||||||||||||||||||||||    
T  41967868 atttgtaaaactgtttcaggtacaggacaaactagaggcaagagacaagacaaaaactca 41967927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 47242535 - 47242592
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||||||||| |||||||||||||||||||||| |||| | | |||||||||||||||    
T  47242535 atttgtaaaattgtttatgggacatgacaaactggaggtaggtgacaagacaaaaact 47242592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 2761575 - 2761631
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    |||||||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||    
T  2761575 atttgtaaaattgtttatgcgacatgataaactagaggcaagggacaaaacaaaaac 2761631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 844743 - 844802
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  844743 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 844802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 6711065 - 6711124
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  6711065 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 6711124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 7837288 - 7837233
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaa 245  Q
    ||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||    
T  7837288 atttgtaaaactgtttcaggaacatgacaaactagaggcaagggacatgacaaaaa 7837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 16387009 - 16386950
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  16387009 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 16386950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 28340322 - 28340381
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  28340322 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactca 28340381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 28868402 - 28868453
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||||||||||    
T  28868402 aaaagtagtgattgaaaattttataaggactaaaagttgaagaaatttttta 28868453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 39282049 - 39281990
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||| || ||| ||||||||||| ||||| |||| ||||||||||||    
T  39282049 atttgtaaaactgtttaaggtacaggacaaactagatgcaagggacaggacaaaaactca 39281990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 51264650 - 51264591
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  51264650 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactca 51264591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 37232746 - 37232796
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttt 327  Q
    ||||||||||||||||||| |||||   |||||||||||||||||||||||    
T  37232746 aaaagtagtgattgaaaactttatagggactaaaagttgaagaaatttttt 37232796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 42512789 - 42512846
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  42512789 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 42512846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 50304806 - 50304749
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||    
T  50304806 atttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacaagacaaaaact 50304749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 16704881 - 16704825
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| |||||||||    
T  16704881 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaac 16704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 7534339 - 7534390
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  ||||||  ||||||||||||||| ||||||||    
T  7534339 aaaagtagtgattgaaaattttataaggactaaaagttgaagagatttttta 7534390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 12890393 - 12890334
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||||| ||| ||| || ||||| |||||||| |||| ||||||||||||    
T  12890393 atttgtaaaactgtttctggtacaggataaactggaggcaagggacaggacaaaaactca 12890334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 16451282 - 16451223
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  16451282 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 16451223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 17888103 - 17888044
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  17888103 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactca 17888044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 24339657 - 24339716
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||| ||||||||  || |||||||||||| |||||||| |||| ||||||||||||    
T  24339657 atttgtataactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 32289363 - 32289422
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||| | |||||||| |||||||||||||||||    
T  32289363 atttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaagacaaaaactca 32289422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 41885167 - 41885116
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||| ||||||    
T  41885167 aaaagtagtgattgaaaattttataaggactaaaagttgaagaaaattttta 41885116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 43846469 - 43846418
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  43846469 aaaagtagtgattgaaaattttatagggactaaaagttgaagaaatttttta 43846418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 33417613 - 33417555
Alignment:
Q  277 aaaagtagtgattgaaaacattataaca-actaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||  ||||||   | ||||||||||||||||||||||||||||    
T  33417613 aaaagtagtgattgaaaattttataagtgattaaaagttgaagaaattttttaaagaga 33417555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 6144005 - 6144062
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||| ||||  | ||||||||||||| |||||||| |||| ||||||||||    
T  6144005 atttgtaaaacagtttcagagacatgacaaactggaggcaagggacaggacaaaaact 6144062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 6771523 - 6771466
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||| |||||||||||  ||||||||| ||| ||||| |||| |||||||||||||||    
T  6771523 atttataaaactgttttagggacatgataaattagagacaagggacaagacaaaaact 6771466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Complemental strand, 10665072 - 10665043
Alignment:
Q  305 actaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||||||||||||||    
T  10665072 actaaaagttgaagaaattttttaaagaga 10665043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 30280813 - 30280854
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaag 318  Q
    ||||||||||||||||||| ||||||  ||||||||||||||    
T  30280813 aaaagtagtgattgaaaactttataaggactaaaagttgaag 30280854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 33826349 - 33826406
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||  |||||   || ||||||||||||||||||||| |||||    
T  33826349 aaaagtagtgattgaaaattttatagggacgaaaagttgaagaaattttttagagaga 33826406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 33841615 - 33841558
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||  |||||   || ||||||||||||||||||||| |||||    
T  33841615 aaaagtagtgattgaaaattttatagggacgaaaagttgaagaaattttttagagaga 33841558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 44521107 - 44521050
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||  |||||   ||||||||||||||||| |||||| |||||    
T  44521107 aaaagtagtgattgaaaattttatagggactaaaagttgaagaaaatttttagagaga 44521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 4895516 - 4895460
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    |||||||||||||||| | ||||  |||||||   ||||||||||||||||||||||    
T  4895516 atttgtaaaactgtttttaggacgagacaaacggaaggcaagagacaagacaaaaac 4895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 7184070 - 7184014
Alignment:
Q  193 tgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  7184070 tgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 7184014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 21785021 - 21784962
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| ||||||||||||| ||||||||||||    
T  21785021 atttgtaaaactgtttcaggcacatgacaaactggaggcaagagacaggacaaaaactca 21784962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 35026419 - 35026363
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    |||| |||||||||||||||||||||||||||||||| |||  |||| |||||||||    
T  35026419 atttataaaactgtttatgggacatgacaaactagagacaaatgacatgacaaaaac 35026363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 3922648 - 3922707
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  3922648 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactca 3922707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 16963288 - 16963229
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||||||||||||||| || | ||||||||||||    
T  16963288 atttgtaaaactgtttcaggtacatgacaaactagaggcaagggataggacaaaaactca 16963229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 36769514 - 36769573
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  36769514 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 36769573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 41211145 - 41211204
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  41211145 atttgtaaaactgtttcaggtacaagacaaactagaggcaagggacaggacaaaaactca 41211204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 44748845 - 44748786
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||||||||||||||| ||||  |||||||||||    
T  44748845 atttgtaaaactgtttcaggtacatgacaaactagaggcaagggacagaacaaaaactca 44748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 38301492 - 38301435
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||    
T  38301492 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaact 38301435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 9328026 - 9327975
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  9328026 aaaagtagtgattgaaaattttatagggactaaaagttgaagaaatttttta 9327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 10932502 - 10932561
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  10932502 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 10932561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 26994170 - 26994229
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| ||||||| ||||    
T  26994170 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaatctca 26994229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 40753305 - 40753246
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  40753305 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 40753246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 43158631 - 43158690
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  43158631 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 43158690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 47953340 - 47953281
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  47953340 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactca 47953281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 18386674 - 18386620
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaa 244  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| |||||||    
T  18386674 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaa 18386620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 329620 - 329563
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  ||||||  ||||||| |||||||  |||||||||||||||    
T  329620 atttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaact 329563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 2873785 - 2873838
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaa 330  Q
    ||||||| ||||||||||  |||||  ||||||||| |||||||||||||||||    
T  2873785 aaaagtaatgattgaaaattttatatgaactaaaaggtgaagaaattttttaaa 2873838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 21849356 - 21849299
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||  ||||||  | |||||||||||||||  |||||||||||    
T  21849356 aaaagtagtgattgaaaattttataaggattaaaagttgaagaaaaattttaaagaga 21849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 29372515 - 29372568
Alignment:
Q  275 caaaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||||  ||||||  ||||||| |||||||| |||||||    
T  29372515 caaaaagtagtgattgaaaattttataaggactaaaaattgaagaattttttta 29372568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 32436577 - 32436536
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaag 318  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  32436577 aaaagtagtgatcgaaaactttataagaactaaaagttgaag 32436536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 48445671 - 48445614
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  ||||||  ||||||| |||||||| |||| ||||||||||    
T  48445671 atttgtaaaactgtttgagggacagaacaaactggaggcaagggacatgacaaaaact 48445614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 13471639 - 13471595
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaa 321  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||    
T  13471639 aaaagtagtgattgaaaattttataaagactaaaagttgaagaaa 13471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 30598952 - 30599012
Alignment:
Q  189 catttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||| ||||    
T  30598952 catttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaagctca 30599012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 37967124 - 37967068
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||||||  || |||||||||| | || ||||| ||||||||||||||    
T  37967124 atttgtaaaactgtttcaggtacatgacaaattggatgcaagggacaagacaaaaac 37967068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 7761517 - 7761576
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||||||    
T  7761517 atttgtaaaactgtttcaggtacatgacaaactagaggcaagggacaggacaaaaactca 7761576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 5278778 - 5278837
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| ||||||||||||    
T  5278778 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactca 5278837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 9732874 - 9732933
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  9732874 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactca 9732933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 35114931 - 35114872
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  35114931 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 35114872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42365723 - 42365664
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||| ||||  || |||||||||||| |||||||| |||||||||||||||||    
T  42365723 atttgtaaaaccgtttcaggtacatgacaaactggaggcaagggacaagacaaaaactca 42365664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 44284775 - 44284716
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  44284775 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactca 44284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 83416 - 83379
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagagg 227  Q
    |||||||||||||||| |||||||||||||||||||||    
T  83416 atttgtaaaactgtttgtgggacatgacaaactagagg 83379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 32766448 - 32766505
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| ||||||||||    
T  32766448 atttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaact 32766505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 3913404 - 3913464
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactcac 250  Q
    ||||||||||||||||  || | |||||||||| ||||||||| ||| |||||||||||||    
T  3913404 atttgtaaaactgtttcaggtatatgacaaactggaggcaagaaacaggacaaaaactcac 3913464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 5612797 - 5612848
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  5612797 aaaagtagtgattgaaaattttatagggactaaaagttgaagaaatttttta 5612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 6376668 - 6376719
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaatttttta 328  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  6376668 aaaagtagtgattgaaaattttatagagactaaaagttgaagaaatttttta 6376719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 7259043 - 7258984
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  7259043 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 7258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 18685982 - 18685923
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||  |||||||||||||||||    
T  18685982 atttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaagacaaaaactca 18685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 32498061 - 32498002
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||||||||||||  ||||||| |||| ||||||||||||    
T  32498061 atttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactca 32498002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 33366756 - 33366697
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  33366756 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 33366697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34338956 - 34338897
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  34338956 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 34338897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 37308801 - 37308742
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  37308801 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 37308742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42706505 - 42706446
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| || ||||||||||||||    
T  42706505 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactca 42706446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 39120199 - 39120145
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaag 331  Q
    ||||||||||||||||||| ||||||  |||||||||||||| ||  ||||||||    
T  39120199 aaaagtagtgattgaaaactttataaggactaaaagttgaaggaaaattttaaag 39120145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 38623248 - 38623305
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  |||||| |||||||| |||||||  || ||||||||||||    
T  38623248 atttgtaaaactgtttcagggacaggacaaacttgaggcaatggaaaagacaaaaact 38623305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 41366054 - 41366111
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||||| |||| ||||  ||||||||||||||| ||||||||||| | ||||||||||    
T  41366054 atttgtgaaacagtttcagggacatgacaaactggaggcaagagataggacaaaaact 41366111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 15303184 - 15303240
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||| ||  | |||| |||||||||||||||||| ||| |||||||||    
T  15303184 atttgtaaaactgcttcagagacaggacaaactagaggcaagacacatgacaaaaac 15303240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 3194878 - 3194933
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    |||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  3194878 atttataaaactgtttataagacatgacaaactagaggcaagaga-aagacaaaaac 3194933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 3259829 - 3259770
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||||    
T  3259829 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactca 3259770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 10324094 - 10324153
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  10324094 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 10324153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 24203508 - 24203449
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||||    
T  24203508 atttgtaaaactgttttaggtacaggacaaactggaggcaagagacaggacaaaaactca 24203449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34176976 - 34176917
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||||| |||||||| |||| ||||||||||||    
T  34176976 atttgtaaaactgtttcaggtacatgacaaactggaggcaagtgacatgacaaaaactca 34176917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 9200370 - 9200427
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggc-aagagacaagacaaaaac 246  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||||||||||||    
T  9200370 atttgtaaaactgttttaaagacatgacaaactagaggctaagagacaagacaaaaac 9200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 166906 - 166965
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| ||||  |||||||||||    
T  166906 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacataacaaaaactca 166965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 11382208 - 11382149
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  11382208 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 11382149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 15276920 - 15276979
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  15276920 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 15276979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 15277263 - 15277322
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||| |||||| || ||| |||||||| |||||||| |||| ||||||||||||    
T  15277263 atttgtaaaattgtttaaggtacaggacaaactggaggcaagggacaggacaaaaactca 15277322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 17867981 - 17867922
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| ||||||| |||||||||    
T  17867981 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactca 17867922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 17877764 - 17877705
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| ||||||| |||||||||    
T  17877764 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactca 17877705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 32132363 - 32132422
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  32132363 atttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactca 32132422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 32860197 - 32860143
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaa 244  Q
    ||||||||||| ||||  ||||||||||||||| |||||||| |||| |||||||    
T  32860197 atttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaa 32860143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 3379856 - 3379799
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    |||| |||||||||||  |  ||| |||||||| ||||||||||||||||||||||||    
T  3379856 atttataaaactgtttcagatacaggacaaactggaggcaagagacaagacaaaaact 3379799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 27824636 - 27824677
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaag 231  Q
    |||||||||||||||| ||||| | |||||||||||||||||    
T  27824636 atttgtaaaactgtttttgggaaaggacaaactagaggcaag 27824677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 35004111 - 35004168
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||| |||||| ||||| || ||||  ||| ||||||||||||||||||||    
T  35004111 atttgtaaaacggtttataggacaagataaaccggagacaagagacaagacaaaaact 35004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 15318 - 15259
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||||||    
T  15318 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactca 15259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000005; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34795033 - 34794974
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| ||||||||||||||||| |||| ||||||||||||    
T  34795033 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactca 34794974  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 35701423 - 35701364
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||||| ||| ||| |||||||| |||||||| |||| ||||||||||||    
T  35701423 atttgtaaaactgtttctggtacaggacaaactggaggcaagggacaggacaaaaactca 35701364  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 27581819 - 27581872
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaa 330  Q
    ||||||||||||||||||  |||||   ||||||||||||||||||||||||||    
T  27581819 aaaagtagtgattgaaaattttatagagactaaaagttgaagaaattttttaaa 27581872  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 553543 - 553484
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||| |||||||||||   | ||| |||||||| ||||||||||||||||||||||||||    
T  553543 atttataaaactgtttcaagtacaggacaaactggaggcaagagacaagacaaaaactca 553484  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 2351826 - 2351767
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||| || | | |||||||| |||||||| |||| ||||||||||||    
T  2351826 atttgtaaaactgtttaaggtataggacaaactggaggcaagtgacaggacaaaaactca 2351767  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 4818090 - 4818149
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| ||||||||  ||||||||||||||||    
T  4818090 atttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactca 4818149  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 7523318 - 7523259
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  7523318 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 7523259  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 11963487 - 11963428
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  11963487 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactca 11963428  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 21739111 - 21739170
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  21739111 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactca 21739170  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 23091254 - 23091313
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| || ||||| |||||||| |||||||||||||||||    
T  23091254 atttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagacaaaaactca 23091313  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 8136982 - 8136924
Alignment:
Q  191 tttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    |||||||||||||||  |  ||| |||||||| ||||||||||||| ||||||||||||    
T  8136982 tttgtaaaactgtttcagatacaggacaaactggaggcaagagacaggacaaaaactca 8136924  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 24206497 - 24206463
Alignment:
Q  210 gacatgacaaactagaggcaagagacaagacaaaa 244  Q
    |||| ||||||||||||||||||||||||||||||    
T  24206497 gacaagacaaactagaggcaagagacaagacaaaa 24206463  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 18470378 - 18470435
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||  ||||||  |||||||  ||||||| |||||||||||||||    
T  18470378 atttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaagacaaaaact 18470435  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 20205858 - 20205911
Alignment:
Q  277 aaaagtagtgattgaaaacattataacaactaaaagttgaagaaattttttaaa 330  Q
    ||||||||||||||||||  |||| | ||||||||||||||||||  |||||||    
T  20205858 aaaagtagtgattgaaaattttatcataactaaaagttgaagaaaagttttaaa 20205911  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 35955125 - 35955088
Alignment:
Q  210 gacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  35955125 gacatgacaaactggaggcatgagacaagacaaaaact 35955088  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 4689648 - 4689704
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| |||||||||    
T  4689648 atttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaac 4689704  T

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Target: scaffold0169 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 18004 - 18063
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || |||||||||| | |||||||| |||| ||||||||||||    
T  18004 atttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactca 18063  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 23721 - 23662
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaactca 249  Q
    ||||||||||||||||  || ||| |||||||| |||||||| |||| ||||||||||||    
T  23721 atttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacatgacaaaaactca 23662  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 108273 - 108311
Alignment:
Q  208 gggacatgacaaactagaggcaagagacaagacaaaaac 246  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  108273 gggacatgacaaactgggggcaagagacaagacaaaaac 108311  T

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Target: scaffold0650 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 1593 - 1650
Alignment:
Q  190 atttgtaaaactgtttatgggacatgacaaactagaggcaagagacaagacaaaaact 247  Q
    ||||||||||||||||   ||| | |||||||| |||||||| |||||||||||||||    
T  1593 atttgtaaaactgtttcaaggataggacaaactggaggcaagggacaagacaaaaact 1650  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Original strand, 38013 - 38042
Alignment:
Q  305 actaaaagttgaagaaattttttaaagaga 334  Q
    ||||||||||||||||||||||||||||||    
T  38013 actaaaagttgaagaaattttttaaagaga 38042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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