View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4533_high_7 (Length: 466)
Name: NF4533_high_7
Description: NF4533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4533_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 427; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 12 - 466
Target Start/End: Original strand, 4309767 - 4310221
Alignment:
| Q |
12 |
atcatcaatttgtctctaaactatcactatttcttcaatttagtctttaaacgaaataaatataacaagtagcagagactacattgatggatttattata |
111 |
Q |
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| T |
4309767 |
atcatcaatttgtctctaaactatcactatttcttcaatttagtctttaaatgaaataaatataacaagtagcagagactacattgatggattttttata |
4309866 |
T |
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| Q |
112 |
gtttatggaccatatacttgttattttttatagtttaaggactaacttagggattaaatttttggtttattctaaataagtactcttgtgctaaggttca |
211 |
Q |
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| T |
4309867 |
gtttatggaccatatacttgttattttttatagtttaaggactaacttagggattaaatttttggtttattctaaataaatactcttgtactaaggttca |
4309966 |
T |
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| Q |
212 |
ttggtaaaaaggctatccaatagtaagatattgtttgccaaaaggctatccaaattgcaatatctagtctagttacacagcagatctagaaggataattt |
311 |
Q |
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| T |
4309967 |
ttggtaaaaaggctatccaatagtaagatattgtttgccaaaaggctatccaaattgcaatatctagtctagttacacagcatatctagaaggataattt |
4310066 |
T |
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| Q |
312 |
aattggatatgctctaatatcattttagaatttagattgggtctagctcaatgctacaaaacaagtatgtgacatgaggactgcccctaattcatatcac |
411 |
Q |
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| T |
4310067 |
aattggatatgctctaatatcattttagaatttagattgggtctagctcaatgctacaaaacaagtatgtgaaatgaggactgcccctaattcatatcac |
4310166 |
T |
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| Q |
412 |
atcctatgtgagactcttaactcaactacataatcaaccaaccaataaaaaacct |
466 |
Q |
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| T |
4310167 |
atccaatgtgagactcttaactcaactacataatcaaccaaccaataaaaaacct |
4310221 |
T |
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