View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4534-Insertion-4 (Length: 205)
Name: NF4534-Insertion-4
Description: NF4534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4534-Insertion-4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 35022831 - 35022634
Alignment:
| Q |
8 |
attgagtcattaactcaaacacaattcacaatagttctctacagaagaatacaaactttctgttcctgttggtttcataaaccaatctaattacaaatct |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
35022831 |
attgagtcattaactcaaacacaattcacaatagttctctacagaagaatacaaactttctgtttctgttggtttcataaaccaatctaattacaaatct |
35022732 |
T |
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| Q |
108 |
taaaacccaattaactaatcattatcactaaacatcaaaacttaaacaacattaacactaaaacagagctaatcaacaacaaacctgaagaacaatca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35022731 |
taaaacccaattaactaatcattatcactaaacatcaaaacttaaacaacattaacactaaaacagagctaatcaacaacaaacctgaagaacaatca |
35022634 |
T |
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