View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4536_low_8 (Length: 261)
Name: NF4536_low_8
Description: NF4536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4536_low_8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 40772366 - 40772193
Alignment:
| Q |
88 |
gacaaagcagtgaatatccgcataactgtctattagtggaccccgtttgagtcttcacaatgtctcttacataaacctttgaggccattggagtggtgac |
187 |
Q |
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| T |
40772366 |
gacaaagcagtgaatatccgcataactgtctattagtggaccccgtttgagtcttcacaatgtctcttacataaacctttgaggccattggagtggtgac |
40772267 |
T |
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| Q |
188 |
caaacagcttggcttgctgtaagcaaaaacaacaatttcatctctatttaagtgtgatcacaaacatattctaa |
261 |
Q |
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| T |
40772266 |
caaacagcttggcttgctgtaagcaaaaacaacaatttcatctctatttaagtgtgatcacaaacatattctaa |
40772193 |
T |
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