View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4537_high_4 (Length: 328)
Name: NF4537_high_4
Description: NF4537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4537_high_4 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 319
Target Start/End: Original strand, 5285373 - 5285674
Alignment:
| Q |
16 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5285373 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
5285472 |
T |
|
| Q |
116 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaat |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5285473 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagtat |
5285572 |
T |
|
| Q |
216 |
aacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5285573 |
aacatcatttctgtccattccaattaagaaacaagc--tgtcaaggaatatttcttgctcatcattatctttcaaatcatcataacttattcttaacttc |
5285670 |
T |
|
| Q |
316 |
ttct |
319 |
Q |
| |
|
|||| |
|
|
| T |
5285671 |
ttct |
5285674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 319
Target Start/End: Original strand, 5261374 - 5261677
Alignment:
| Q |
16 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
115 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
5261374 |
atcacatcctcctgatcacacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaatttctcttcccatatctcgcaacaaaccatgca |
5261473 |
T |
|
| Q |
116 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaat |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
5261474 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcatgaagtccacagtcatttaatacgagtat |
5261573 |
T |
|
| Q |
216 |
aacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttc |
315 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
5261574 |
aacatcatttcggtccattccaattaagaaacaagctatgtcaagaaatatttcttgctcatcgtcatctttcaaatcatcataacttattcttaacttc |
5261673 |
T |
|
| Q |
316 |
ttct |
319 |
Q |
| |
|
|||| |
|
|
| T |
5261674 |
ttct |
5261677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 16 - 319
Target Start/End: Complemental strand, 5445851 - 5445551
Alignment:
| Q |
16 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
115 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
5445851 |
atcacatcctcctgatcccacaacctactacgtttctcaggcctccttggtgattcctcacaaacgattcctcttcccatatctcgcagctgaccatgca |
5445752 |
T |
|
| Q |
116 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaat |
215 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||| || |||||||||| || || |
|
|
| T |
5445751 |
ttccaagcatgttcttatcatcaacagtcacaaggcttcgagcaacaaggacacttattccaatttctgcagaaagtccgcaatcatttaataaaagtat |
5445652 |
T |
|
| Q |
216 |
aacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttc |
315 |
Q |
| |
|
|||||||||| |||||| || | ||||||||||| |||| |||||||||||||| |||| || | || ||| |||||||||| || ||||||||| |
|
|
| T |
5445651 |
aacatcattttggtccatcccgacaaagaaacaagcaatgtgaaggaatatttctttctcagca---tgatttaaaccatcataactcatccttaacttc |
5445555 |
T |
|
| Q |
316 |
ttct |
319 |
Q |
| |
|
|||| |
|
|
| T |
5445554 |
ttct |
5445551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 63 - 316
Target Start/End: Complemental strand, 5424480 - 5424227
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
|||||||| | |||||| ||| |||||||||||||||||| |||| ||||||||||||| |||| |||||||||||| | ||||| || | ||||||| |
|
|
| T |
5424480 |
tggtgatttcccacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttattatcatcaacagtgacaagactccgctcaaca |
5424381 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5424380 |
aggatacttattccaatttcagcaaaaagtccacatccatttaatataagtgtaacatcatttctgtccattccaataaagaaacaagctatgtcaagga |
5424281 |
T |
|
| Q |
263 |
atatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttct |
316 |
Q |
| |
|
||||||||| |||| || || || ||| ||||||| |||||||||||||||| |
|
|
| T |
5424280 |
atatttctttctcagtatcatcatttaaagcatcatagcttattcttaacttct |
5424227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 62 - 317
Target Start/End: Complemental strand, 5342422 - 5342167
Alignment:
| Q |
62 |
ttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaac |
161 |
Q |
| |
|
||||||||| ||||||||| ||| ||||||||||||||||||||||| | ||||||||||| ||||||| |||||| | |||||||||| |||||| |
|
|
| T |
5342422 |
ttggtgatttctcacgaacgatttctcttcccatatctcgcagcaaatcgtgcattccaagtttgttcttgctgtcaacaattacaaggcttcgctcaac |
5342323 |
T |
|
| Q |
162 |
aaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagg |
261 |
Q |
| |
|
||| || |||||||||||||||||| ||||||||||| ||||||||| | || |||||||||| |||||| ||||| |||||||||||||||||||| |
|
|
| T |
5342322 |
aagaacacttattccaatttctgcaaaaagtccacagccatttaatatttgtatgacatcatttcggtccatcccaataaagaaacaagctatgtcaaga |
5342223 |
T |
|
| Q |
262 |
aatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttctt |
317 |
Q |
| |
|
|||||||||| |||| | ||| || ||| ||||||| |||||| |||||||||| |
|
|
| T |
5342222 |
aatatttctttctcagtctcgtcatttaaaccatcatagcttatttttaacttctt |
5342167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 63 - 319
Target Start/End: Complemental strand, 5369187 - 5368931
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
|||||||| | |||||| ||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| | ||||| |||| ||||||| |
|
|
| T |
5369187 |
tggtgatttcccacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagtgacaagacttcgctcaaca |
5369088 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||| ||| ||||| || |||||||||||| |||| | ||||| ||||||||||||| ||||||| |
|
|
| T |
5369087 |
aggatacttattccaatttcagcaaaaagtccacatccatctaatataagtgtaacatcatttcggtccttcccaataaagaaacaagctacatcaagga |
5368988 |
T |
|
| Q |
263 |
atatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttcttct |
319 |
Q |
| |
|
||||||||| ||||| || || || ||| ||||||| ||||||||||||||||||| |
|
|
| T |
5368987 |
atatttctttctcataatcatcatttaaagcatcatagcttattcttaacttcttct |
5368931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 316
Target Start/End: Original strand, 5068349 - 5068602
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
|||||||| | ||||||| ||| |||||||||||||||||| |||| ||||||||||||| ||||||| | ||||||| | || || |||| ||||||| |
|
|
| T |
5068349 |
tggtgatttcccacgaacgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttctttttatcaacaataaccagacttcgctcaaca |
5068448 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
|||| |||||||||||||| ||| ||||||| || ||||||||| || |||||||||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
5068449 |
aggatacttattccaatttcagcaaaaagtccgcatccatttaatataagtgtaacatcatttcggtccatcccaataaagaaacaagctatgtcaagga |
5068548 |
T |
|
| Q |
263 |
atatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttct |
316 |
Q |
| |
|
||||||||| |||| || || || ||| ||||||| |||||||||||||||| |
|
|
| T |
5068549 |
atatttctttctcagtatcatcatttaaagcatcatagcttattcttaacttct |
5068602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 63 - 319
Target Start/End: Complemental strand, 5094768 - 5094512
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| | ||||| || | ||||||| |
|
|
| T |
5094768 |
tggtgatttctcacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagttacaagactacgctcaaca |
5094669 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||| ||||||||| || |||| ||||||| |||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
5094668 |
aggatacttattccaatttcagcaaaaagtccacatccatttaatataagtgtaacgtcatttcggtccatcccaataaagaaacaagctacatcaagga |
5094569 |
T |
|
| Q |
263 |
atatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttcttct |
319 |
Q |
| |
|
||||||||| |||| | || || ||| ||||||| ||||||||||||||||||| |
|
|
| T |
5094568 |
atatttctttctcaatgtcatcatttaaagcatcatagcttattcttaacttcttct |
5094512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 64 - 271
Target Start/End: Original strand, 5355892 - 5356099
Alignment:
| Q |
64 |
ggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaa |
163 |
Q |
| |
|
||||||| ||||||||| | | |||||||||||||||| |||||| ||||||||| |||| | ||||||||||||||| | |||||||||| |||||||| |
|
|
| T |
5355892 |
ggtgatttctcacgaacgacttctcttcccatatctcgtagcaaatcatgcattctaagcctattcttatcatcaacagttacaaggcttcgctcaacaa |
5355991 |
T |
|
| Q |
164 |
ggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaa |
263 |
Q |
| |
|
| | |||||||||||||| |||||||||||||| ||||||||| || || ||||||||| ||| || ||||| |||||||||||||||||||| || |
|
|
| T |
5355992 |
gaatacttattccaatttcagcataaagtccacatccatttaatattagtgtagcatcatttcggtcgatcccaataaagaaacaagctatgtcaagaaa |
5356091 |
T |
|
| Q |
264 |
tatttctt |
271 |
Q |
| |
|
|||||||| |
|
|
| T |
5356092 |
tatttctt |
5356099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 32 - 317
Target Start/End: Complemental strand, 5395801 - 5395516
Alignment:
| Q |
32 |
accacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttctt |
131 |
Q |
| |
|
|||||||||||||||| | ||| ||| ||||||| | ||||||||| ||| ||||||||||||||| |||||| |||||||| |||| ||||| | |
|
|
| T |
5395801 |
accacaacctgctacgctcctcgggctcttttggtgacttctcacgaacgatttctcttcccatatctcttagcaaatcatgcattgcaagtctgttcct |
5395702 |
T |
|
| Q |
132 |
atcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtcc |
231 |
Q |
| |
|
|||||||||| | |||||||||| |||||||||||| |||| ||||||||||||| ||||| | | ||||||||| | ||||||||||| |||||| |
|
|
| T |
5395701 |
atcatcaacagttacaaggcttcgctcaacaaggacacttactccaatttctgcaaaaagttcgctaccatttaatatatgtataacatcattcctgtcc |
5395602 |
T |
|
| Q |
232 |
attccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttctt |
317 |
Q |
| |
|
|| ||||| || |||||||||||||||||||||||||||| |||| | || || ||| ||||||| |||||| |||||||||| |
|
|
| T |
5395601 |
atcccaataaaaaaacaagctatgtcaaggaatatttctttctcagtgtcatcatttaaagcatcatagcttatttttaacttctt |
5395516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 271
Target Start/End: Original strand, 5183196 - 5183435
Alignment:
| Q |
32 |
accacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttctt |
131 |
Q |
| |
|
|||||||||||||||| | ||||||| ||||||| | ||||||||| ||| ||||||||||||||| |||||| |||||||| || ||||| | |
|
|
| T |
5183196 |
accacaacctgctacgctcctcaggctcttttggtgacttctcacgaacgatttctcttcccatatctcttagcaaatcatgcatttgcagtttgttcct |
5183295 |
T |
|
| Q |
132 |
atcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtcc |
231 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||| |||| ||||||||||||| ||| | | | ||||||||| | ||||||||||| |||||| |
|
|
| T |
5183296 |
atcatcaacagttacaaggcttctctcaacaaggacacttactccaatttctgcaaaaaattcgctaccatttaatatatgtataacatcattcctgtcc |
5183395 |
T |
|
| Q |
232 |
attccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5183396 |
atcccaataaagaaacaagctatgtcaaggaatatttctt |
5183435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 63 - 317
Target Start/End: Original strand, 5104147 - 5104401
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| | | ||| |||| ||||||| |
|
|
| T |
5104147 |
tggtgatttctcacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagttataagacttcgctcaaca |
5104246 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||| ||| ||||| || |||| ||||||| |||||| ||||| ||||||||||||| || |||| |
|
|
| T |
5104247 |
aggatacttattccaatttctgcaaaaagtccacatccatctaatataagtgtaacgtcatttcggtccatcccaataaagaaacaagctacatcgagga |
5104346 |
T |
|
| Q |
263 |
atatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttctt |
317 |
Q |
| |
|
||||||||| |||| | || || ||| |||| || ||||||||||||||||| |
|
|
| T |
5104347 |
atatttctttctcaatgtcatcatttaaaccatcgtagcttattcttaacttctt |
5104401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 63 - 314
Target Start/End: Complemental strand, 5349104 - 5348851
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccat--gcattccaagcatgttcttatcatcaacactcacaaggcttctctcaa |
160 |
Q |
| |
|
|||||||| | |||||| ||| |||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||| | ||||| |||| |||| |
|
|
| T |
5349104 |
tggtgatttcccacgaatgatttctcttcccatatctcgcaacaaatcatatgcattccaagtttgttcttatcatcaacagtgacaagacttcgatcaa |
5349005 |
T |
|
| Q |
161 |
caaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaag |
260 |
Q |
| |
|
||| || |||||||||||||| ||| ||||| |||| ||||||||| || |||||||||||| |||||| ||||| |||||||||||||||||||| |
|
|
| T |
5349004 |
caaagatacttattccaatttcagcaaaaagttcacatccatttaatataagtgtaacatcatttcggtccatcccaataaagaaacaagctatgtcaag |
5348905 |
T |
|
| Q |
261 |
gaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaactt |
314 |
Q |
| |
|
||||||||||| |||| || || |||||| |||| || |||||||||||||| |
|
|
| T |
5348904 |
gaatatttctttctcagtatcatcattcaaagcatcgtagcttattcttaactt |
5348851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 64 - 317
Target Start/End: Original strand, 5133181 - 5133434
Alignment:
| Q |
64 |
ggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaa |
163 |
Q |
| |
|
|||||||| ||||||| |||| ||||||||||||||| || |||| |||||||||||||| ||| |||| |||||||| | |||||||||||||||| || |
|
|
| T |
5133181 |
ggtgattcttcacgaataatttctcttcccatatctctcaacaaatcatgcattccaagcctgtccttagcatcaacagttacaaggcttctctcaataa |
5133280 |
T |
|
| Q |
164 |
ggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaa |
263 |
Q |
| |
|
| | |||||||||||||| ||| |||||||||| ||||||||| | ||||||||||| ||||||| |||| || ||||||||||||| |||||| |
|
|
| T |
5133281 |
gaatacttattccaatttcggcaaaaagtccacaaccatttaatatatgtgtaacatcatttgtgtccatatcaataaaaaaacaagctatgttaaggaa |
5133380 |
T |
|
| Q |
264 |
tatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttctt |
317 |
Q |
| |
|
|||||||| |||| || || || ||| ||||||| |||||| ||| |||||| |
|
|
| T |
5133381 |
tatttctttctcaatatcttcatttaaagcatcatagcttatttttagcttctt |
5133434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 5148233 - 5148442
Alignment:
| Q |
62 |
ttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaac |
161 |
Q |
| |
|
||||||||||||| || | ||| ||||| |||| ||||||| |||| |||||||||||||| ||| ||||||||||| |||||||||||| ||| | |
|
|
| T |
5148233 |
ttggtgattcctcgcgtatgatttctcttgccatgtctcgcaacaaatcatgcattccaagccgattcatatcatcaacagtcacaaggcttcgctccag |
5148332 |
T |
|
| Q |
162 |
aaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagg |
261 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||||||| | || |||||||||| |||||| ||||| ||||||||||||||||||||| |
|
|
| T |
5148333 |
taggacatttattccaatttctgcataaagttcacagccatttaatatatgtatgacatcatttcggtccatcccaataaagaaacaagctatgtcaagg |
5148432 |
T |
|
| Q |
262 |
aatatttctt |
271 |
Q |
| |
|
|||||||||| |
|
|
| T |
5148433 |
aatatttctt |
5148442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 73 - 268
Target Start/End: Original strand, 5075016 - 5075211
Alignment:
| Q |
73 |
tcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgctta |
172 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||| ||| | |||||||||| ||||||||| || |||| |
|
|
| T |
5075016 |
tcacgaatgatttctcttcccatatcacgcagcaaatcatgcattccaagcttgttcctatcatcgacagttacaaggcttcgctcaacaagtacactta |
5075115 |
T |
|
| Q |
173 |
ttccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatattt |
268 |
Q |
| |
|
||||||||| ||| ||||| |||| ||||||||| || |||||||||||| ||||| ||||| ||||||||||||||||| |||||||||| |
|
|
| T |
5075116 |
ctccaatttcagcaaaaagttcacatccatttaatataagtgtaacatcatttcgatccatcccaataaagaaacaagctatgtcgaggaatattt |
5075211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 63 - 276
Target Start/End: Original strand, 5158776 - 5158989
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||||||||| |||| ||||||||||||| |||||||| |||||||| | ||||| || | ||||||| |
|
|
| T |
5158776 |
tggtgatttctcacgaatgatttctcttcccatatctcgcaacaaatcatgcattccaagtttgttcttaccatcaacagtaacaagactacgctcaaca |
5158875 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
|||| ||||||||||||||| || ||||| |||| ||||||||| || |||| ||||||| |||||| || || ||||||||||||| ||||||| |
|
|
| T |
5158876 |
aggatgcttattccaatttcaccaaaaagttcacatccatttaatataagtgtaacgtcatttcggtccatccctataaagaaacaagctacatcaagga |
5158975 |
T |
|
| Q |
263 |
atatttcttgctca |
276 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5158976 |
atatttctttctca |
5158989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 271
Target Start/End: Original strand, 5691390 - 5691594
Alignment:
| Q |
67 |
gattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaagga |
166 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||||||| ||| ||||||| |
|
|
| T |
5691390 |
gatttctcacgaacgatttctcttcccatatctcgcaacaaatcatgcattctaagcctgttcctatcatcaacagtcacaaggcttcgctccacaagga |
5691489 |
T |
|
| Q |
167 |
cgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatat |
266 |
Q |
| |
|
| ||||||||||| |||||||||| |||| ||| ||||| | | ||||||||||| |||| ||||| ||||||||||| | |||||||||||| |
|
|
| T |
5691490 |
catttattccaattcctgcataaagatcacaaccatctaatatatgtacaacatcatttcgaaccatcccaataaagaaacaagccacgtcaaggaatat |
5691589 |
T |
|
| Q |
267 |
ttctt |
271 |
Q |
| |
|
||||| |
|
|
| T |
5691590 |
ttctt |
5691594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 271
Target Start/End: Complemental strand, 5382419 - 5382168
Alignment:
| Q |
19 |
acatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattc |
118 |
Q |
| |
|
|||||||| || |||| ||||||||||| | |||||| | ||||||||| ||||||| ||| ||||||||||||| | | |||| ||||||||| |
|
|
| T |
5382419 |
acatcctcatgaaaccataacctgctacgctcctcaggatcctttggtgatttttcacgaatgatttctcttcccatatcccttaacaaatcatgcattc |
5382320 |
T |
|
| Q |
119 |
caagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataac |
218 |
Q |
| |
|
|||| | ||||||||||| ||| | ||||||||||||||||||||||| |||||||| || || ||| |||| ||||| ||||||||| | |||| |
|
|
| T |
5382319 |
caagtgtattcttatcatcgacagttacaaggcttctctcaacaaggacacttattccgatatcagcaaaaagcccacacccatttaatatttgtgtaac |
5382220 |
T |
|
| Q |
219 |
atcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
||| |||| ||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5382219 |
atcgtttcggtcca-tccaataaagaaacaagctatgtcaaggaatatttctt |
5382168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 267
Target Start/End: Complemental strand, 5277397 - 5277216
Alignment:
| Q |
86 |
ctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgc |
185 |
Q |
| |
|
||||||||||||| |||| |||| ||||||||||||| |||| |||| |||||| | || | ||||| |||||||||||| ||||||||| |||||| |
|
|
| T |
5277397 |
ctcttcccatatcccgcaacaaattatgcattccaagcttgtttttattatcaaccgttactaagcttcgctcaacaaggacacttattccatcttctgc |
5277298 |
T |
|
| Q |
186 |
ataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatt |
267 |
Q |
| |
|
| ||| ||||||| ||||||||| | |||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||| |
|
|
| T |
5277297 |
aaaaaatccacagccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctacgtcgaggaatatt |
5277216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 86 - 267
Target Start/End: Complemental strand, 5175570 - 5175389
Alignment:
| Q |
86 |
ctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgc |
185 |
Q |
| |
|
||||||||||||| |||| |||| ||||||||||||| |||| |||| |||||| | || | ||||| |||||| ||||| ||||||||| |||||| |
|
|
| T |
5175570 |
ctcttcccatatcccgcaacaaattatgcattccaagcttgtttttattatcaaccgttactaagcttcgctcaaccaggacacttattccatcttctgc |
5175471 |
T |
|
| Q |
186 |
ataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatt |
267 |
Q |
| |
|
| ||| ||||||| ||||||||| | |||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||| |
|
|
| T |
5175470 |
aaaaaatccacagccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctacgtcgaggaatatt |
5175389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 267
Target Start/End: Complemental strand, 5432111 - 5431930
Alignment:
| Q |
86 |
ctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgc |
185 |
Q |
| |
|
||||||||||||| |||| |||| |||||||||||||| |||| | |||||||| | || | ||| | |||||||||||| ||||||||| ||| || |
|
|
| T |
5432111 |
ctcttcccatatcccgcaacaaatcatgcattccaagcttgttatcatcatcaatatatactaagctacgctcaacaaggactcttattccatcttcagc |
5432012 |
T |
|
| Q |
186 |
ataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatt |
267 |
Q |
| |
|
| | | || |||| |||||| || | ||||||||||||| ||| | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5432011 |
aaacaatcgacagccatttagtatatgtataacatcatttcgctccttaccaataaagaaacaagctatgtcaaggaatatt |
5431930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 16 - 319
Target Start/End: Original strand, 22585549 - 22585852
Alignment:
| Q |
16 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
115 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22585549 |
atcacatcctccggatacaacaacctgctacgcttctcaggactctttggtgattcctcaagaacaattcctcttcccatatctcgcagcaaatcatgca |
22585648 |
T |
|
| Q |
116 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaat |
215 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| || |
|
|
| T |
22585649 |
ttccaagcctgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcatgaagtccacagtcatttaatatgagtat |
22585748 |
T |
|
| Q |
216 |
aacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttc |
315 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
22585749 |
aacatcatttcggtccattccaattaagaaaaaagctatgtcaaggaatatttcttgctcatcagtatcttccaaatcatcataacttattcttaacttc |
22585848 |
T |
|
| Q |
316 |
ttct |
319 |
Q |
| |
|
|||| |
|
|
| T |
22585849 |
ttct |
22585852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 136; Significance: 6e-71; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 4125668 - 4125919
Alignment:
| Q |
16 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
115 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||| ||||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||||| |
|
|
| T |
4125668 |
atcacatcctcatgataccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgca |
4125767 |
T |
|
| Q |
116 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaat |
215 |
Q |
| |
|
| |||||| |||||||||||||||| | |||||||||| ||||||||||| |||||||||||||| || ||||||||||| ||||||| | ||||| |
|
|
| T |
4125768 |
tgccaagcttgttcttatcatcaactgttacaaggcttcgttcaacaaggacacttattccaatttcagcgaaaagtccacagccatttaaaataagaat |
4125867 |
T |
|
| Q |
216 |
aacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatt |
267 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4125868 |
aacatcatttcggtccatcccaattaagaaacaagctatgtcaaggaatatt |
4125919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 317
Target Start/End: Complemental strand, 4359184 - 4358883
Alignment:
| Q |
16 |
atcacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgca |
115 |
Q |
| |
|
||||||||||| || |||||| ||| ||| ||| ||||||| | ||||||||| |||||||| ||| |||||||||||||||| |||||| |||||| |
|
|
| T |
4359184 |
atcacatcctcatgaaaccacagcctactatgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcggagcaaatcatgca |
4359085 |
T |
|
| Q |
116 |
ttccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaat |
215 |
Q |
| |
|
| |||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| ||| ||||| |||| |
|
|
| T |
4359084 |
tgccaagcttgttcttatcatcaaccgttacaaggcttctctcaacaaggacacttattccaattcctgcaaaaaatccacagccatctaatatacgaat |
4358985 |
T |
|
| Q |
216 |
aacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttc |
315 |
Q |
| |
|
||||||||| | |||||||||||| |||||||||| |||||||||||||||||||| || || || || ||| |||||||||||||| |||||||| |
|
|
| T |
4358984 |
aacatcattccggtccattccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcatcatttaaaccatcataacttatttttaacttc |
4358885 |
T |
|
| Q |
316 |
tt |
317 |
Q |
| |
|
|| |
|
|
| T |
4358884 |
tt |
4358883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 4334324 - 4334025
Alignment:
| Q |
18 |
cacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcatt |
117 |
Q |
| |
|
||||||||| || |||||||||| ||||||| ||||||| | ||||||||| |||||||| ||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
4334324 |
cacatcctcatgaaaccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttctcttcccatatctcgaagcaaatcatgcatg |
4334225 |
T |
|
| Q |
118 |
ccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataa |
217 |
Q |
| |
|
|||||| |||||||| |||| || | |||||||||| |||||||||||| |||||||||||||| || ||||||||||| ||||||||| |||||| |
|
|
| T |
4334224 |
ccaagcttgttcttaccatcgaccgttacaaggcttcgctcaacaaggacacttattccaatttcagcgaaaagtccacagccatttaatatttgaataa |
4334125 |
T |
|
| Q |
218 |
catcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttctt |
317 |
Q |
| |
|
||||||||| |||||| ||||| ||||||||||||||||||||||||||| || |||| || || || ||| ||||||| |||||| |||||||||| |
|
|
| T |
4334124 |
catcatttcggtccatcccaataaagaaacaagctatgtcaaggaatattgatttctcagtatcatcatttaaaccatcatagcttatttttaacttctt |
4334025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 267
Target Start/End: Original strand, 4322346 - 4322581
Alignment:
| Q |
32 |
accacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttctt |
131 |
Q |
| |
|
|||||||||| ||||||| ||||||| | ||||||||| |||||||| ||| | ||||||||||||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
4322346 |
accacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttcccttcccatatctcgcagcaaatcatgcatgccaagcttgttctt |
4322445 |
T |
|
| Q |
132 |
atcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtcc |
231 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||| |||| | ||||||||| |||| |||||||||| ||| |
|
|
| T |
4322446 |
atcatcaaccgttacaaggcttctctcaacaaggacacttattccaatttctgcgaaaaatccagaaccatttaatatatgaatgacatcatttcgatcc |
4322545 |
T |
|
| Q |
232 |
attccaattaagaaacaagctatgtcaaggaatatt |
267 |
Q |
| |
|
|| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
4322546 |
atcccaataaagaaacaagcaatgtcaaggaatatt |
4322581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 32 - 271
Target Start/End: Complemental strand, 4343699 - 4343460
Alignment:
| Q |
32 |
accacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttctt |
131 |
Q |
| |
|
|||||||||| ||| ||| ||||||| | |||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
4343699 |
accacaacctactatgttcctcaggctcctttggcgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatgccaagcttgttctt |
4343600 |
T |
|
| Q |
132 |
atcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtcc |
231 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| ||||| || |||||||| ||| ||||||| |||||| || ||||||||||||||| ||| |
|
|
| T |
4343599 |
atcatcaaccattacaaggcttctctcaacaaggacacttatgccgatttctgcgaaaaatccacagccatttagtatacgaataacatcatttcgatcc |
4343500 |
T |
|
| Q |
232 |
attccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
|| ||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
4343499 |
atcccaataaagaaacaagatatgtcgaggaatatttctt |
4343460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 32 - 267
Target Start/End: Complemental strand, 4351987 - 4351752
Alignment:
| Q |
32 |
accacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttctt |
131 |
Q |
| |
|
|||||||||| ||||||| ||||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| ||||||| |||||| |||| || |
|
|
| T |
4351987 |
accacaacctactacgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatgccaagcttgttttt |
4351888 |
T |
|
| Q |
132 |
atcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtcc |
231 |
Q |
| |
|
||||||||| | |||||||||||||||||||| || ||||||||||||||| |||||| ||| |||||||| |||||||||||||||||| |
|
|
| T |
4351887 |
atcatcaacgattacaaggcttctctcaacaagaacctttattccaatttctgtgaaaagtctgcagctatttaatatacaaataacatcatttctgtct |
4351788 |
T |
|
| Q |
232 |
attccaattaagaaacaagctatgtcaaggaatatt |
267 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
4351787 |
atcccaataaagaaacaagctatgtcaaggaatatt |
4351752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 86 - 266
Target Start/End: Original strand, 4135080 - 4135260
Alignment:
| Q |
86 |
ctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgc |
185 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||| |||| |||||||||| | | |||||||||| |||||||||||| |||||||| ||||| || |
|
|
| T |
4135080 |
ctcttcccatatctcgtagcaaatcatgcattccaagcttgtttttatcatcaatagttacaaggcttcgctcaacaaggacacttattccgatttcagc |
4135179 |
T |
|
| Q |
186 |
ataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatat |
266 |
Q |
| |
|
| |||| ||||| ||||||||| |||||||| |||| |||||| ||||| |||||| |||| |||||||||||||| |
|
|
| T |
4135180 |
aaaaagaccacaaccatttaatatatccataacatcgtttcggtccatcccaataaagaaaaaagcaatgtcaaggaatat |
4135260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 25568688 - 25568513
Alignment:
| Q |
97 |
tctcgcagcaaaccatgcattccaagcatgttcttat-catcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtcca |
195 |
Q |
| |
|
||||||| |||| ||||||||||||| ||||| || |||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
25568688 |
tctcgcaacaaatcatgcattccaagtctgttccaattcatcaatagtcacaaggcttcgctcaacaaggacgtttattccaatttctgcataaagttca |
25568589 |
T |
|
| Q |
196 |
cagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
|| |||| |||| | || |||| ||||| | ||| ||||| |||||||||||||||| |||||||| |||| |
|
|
| T |
25568588 |
caaccattcaatatatgtattacattatttcggaccaacccaataaagaaacaagctatgttgaggaatatatctt |
25568513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 268
Target Start/End: Original strand, 6547189 - 6547370
Alignment:
| Q |
87 |
tcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgca |
186 |
Q |
| |
|
||||||||| |||| || |||| ||||||||| |||| ||||| ||| |||||| | |||||||||| ||| |||||||| | |||||||| || ||| |
|
|
| T |
6547189 |
tcttcccatgtctctcaacaaatcatgcattctaagcttgttcctattgtcaacagttacaaggcttcgctctacaaggactttaattccaatatcagca |
6547288 |
T |
|
| Q |
187 |
taaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatattt |
268 |
Q |
| |
|
||| || ||| ||||||||| | || |||||||| ||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
6547289 |
aaaaatctacacccatttaatatttgtattgcatcatttttgtccatcccaataaagaaacaagctatatcaaggaatattt |
6547370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 268
Target Start/End: Complemental strand, 6649760 - 6649555
Alignment:
| Q |
63 |
tggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaaca |
162 |
Q |
| |
|
||||||||||||| ||| ||| || |||||| |||| | |||| ||||||||| |||| ||||| ||| |||||| | |||||||||||||| ||| |
|
|
| T |
6649760 |
tggtgattcctcataaactatttgtcgtcccatgtctcttaacaaatcatgcattctaagcttgttcctattgtcaacagttacaaggcttctctctaca |
6649661 |
T |
|
| Q |
163 |
aggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaagga |
262 |
Q |
| |
|
||||| | |||||||| || ||| ||| ||||| ||||||||| | || ||||||||| |||||||||||| ||||||||||| || ||||||| |
|
|
| T |
6649660 |
aggactttaattccaatatcagcaaaaaatccactcccatttaatatttgtattgcatcatttcggtccattccaataaagaaacaagcaatatcaagga |
6649561 |
T |
|
| Q |
263 |
atattt |
268 |
Q |
| |
|
|||||| |
|
|
| T |
6649560 |
atattt |
6649555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 266
Target Start/End: Original strand, 6499634 - 6499812
Alignment:
| Q |
88 |
cttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcat |
187 |
Q |
| |
|
||||||||||||| || |||| ||||||||| |||| ||||| ||| |||| | | | |||||||| ||| |||||||| | |||||||| || ||| |
|
|
| T |
6499634 |
cttcccatatctctcaacaaatcatgcattctaagcttgttcctattgtcaataattaaaaggcttcgctctacaaggactttaattccaatatcagcaa |
6499733 |
T |
|
| Q |
188 |
aaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatat |
266 |
Q |
| |
|
||| |||||| ||||||||| | || |||||||||| |||||| ||||| ||||| |||||||| ||||||||||| |
|
|
| T |
6499734 |
aaaatccacacccatttaatatttgtattacatcatttcggtccatcccaataaagaagcaagctatatcaaggaatat |
6499812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 268
Target Start/End: Complemental strand, 6757146 - 6756965
Alignment:
| Q |
87 |
tcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgca |
186 |
Q |
| |
|
||||||||| |||| || |||||||||||||| |||| ||||| | | ||||| | |||||| ||| ||| ||||| || | |||||||| || ||| |
|
|
| T |
6757146 |
tcttcccatgtctctcaacaaaccatgcattctaagcttgttcctgttgtcaacggttacaagggttcactctacaagaactttaattccaatatcagca |
6757047 |
T |
|
| Q |
187 |
taaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatattt |
268 |
Q |
| |
|
||| |||||| ||||||||| | || ||||||||||||||| | ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
6757046 |
aaaaatccacacccatttaatatttgtattacatcatttctgtccttcccaataaagaaacaagctatatcaaggaatattt |
6756965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 6623716 - 6623903
Alignment:
| Q |
88 |
cttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcat |
187 |
Q |
| |
|
||||||||||||| || ||| ||||||||| |||| ||||| ||| |||||| | |||||||||| ||| |||||||| | |||||||| || ||| |
|
|
| T |
6623716 |
cttcccatatctctcaacaagtcatgcattctaagcttgttcctattgtcaacagttacaaggcttcgctctacaaggactttaattccaatatccgcaa |
6623815 |
T |
|
| Q |
188 |
aaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttcttgctc |
275 |
Q |
| |
|
||| ||||| ||||||||| || |||||||| | ||||||||||| |||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
6623816 |
aaaacccacacccatttaatatttttattgcatcatttttatccattccaatcaagaaacaggctatatcaaggaatatttgttgctc |
6623903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 6814437 - 6814274
Alignment:
| Q |
105 |
caaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcattt |
204 |
Q |
| |
|
|||| ||||||||| |||| ||||| ||| |||||| | |||||| || |||||||||||| | |||||||| || ||| || |||||| ||||| |
|
|
| T |
6814437 |
caaatcatgcattctaagcttgttcctattgtcaacagttacaagggctcgctcaacaaggactttaattccaatatcagcaaaatatccacacccattt |
6814338 |
T |
|
| Q |
205 |
aatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatattt |
268 |
Q |
| |
|
|||| | || |||||||||| |||| | ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
6814337 |
aatattcgtattacatcatttcggtccctcccaataaagaaacaagctatatcaaggaatattt |
6814274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 268
Target Start/End: Complemental strand, 6751528 - 6751347
Alignment:
| Q |
87 |
tcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgca |
186 |
Q |
| |
|
||||||||| |||| || |||| ||||||||| |||| ||||| || |||||| | ||||| |||| ||| | |||||| | |||||| || ||| |
|
|
| T |
6751528 |
tcttcccatgtctctcaacaaatcatgcattctaagcttgttcccattgtcaacagttacaagacttcgctctaaaaggactttcattccagaatcagca |
6751429 |
T |
|
| Q |
187 |
taaagtccacagtcatttaatacgagaataacatcatttctgtccattccaattaagaaacaagctatgtcaaggaatattt |
268 |
Q |
| |
|
||| ||||| ||||||||| |||| |||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
6751428 |
aaaaacccacacccatttaatatttgaattacatcatttcggtccattccaataaagaaacaggctatatcaaggaatattt |
6751347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 6535080 - 6535168
Alignment:
| Q |
229 |
tccattccaattaagaaacaagctatgtcaaggaatatttcttgctcatcattgtctttcaaatcatcataacttattcttaacttctt |
317 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||||||| |||||| | ||||| ||| ||||| |||||||||||| |||||| |
|
|
| T |
6535080 |
tccattccaatcaagaaacaggctatatcaaggaatatttgttgctctgtaacatcttttaaaccatcaaaacttattcttagcttctt |
6535168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 6674555 - 6674505
Alignment:
| Q |
218 |
catcatttctgtccattccaattaagaaacaagctatgtcaaggaatattt |
268 |
Q |
| |
|
||||||||| |||||| ||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
6674555 |
catcatttcggtccatcccaataaagaagcaagctatatcaaggaatattt |
6674505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 271
Target Start/End: Original strand, 36215136 - 36215375
Alignment:
| Q |
32 |
accacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttctt |
131 |
Q |
| |
|
|||||||||||||||| | |||| || | ||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| | |
|
|
| T |
36215136 |
accacaacctgctacgctcctcaagctcctttggtgatttctcacgaatgatctctcttcccatatctcgcagcaaatcatgcattccaagcctgttcct |
36215235 |
T |
|
| Q |
132 |
atcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataacatcatttctgtcc |
231 |
Q |
| |
|
|||||||||| | |||||||||| ||| ||||| || |||| ||||||||||||| ||||| ||| ||||||||| | |||||||||||||||||| |
|
|
| T |
36215236 |
atcatcaacagttacaaggcttcgctctacaagaacacttactccaatttctgcaaaaagttcacttccatttaatatatgtataacatcatttctgtcc |
36215335 |
T |
|
| Q |
232 |
attccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
36215336 |
atcccaataaagaaacaagctatgtcaaggaatatttctt |
36215375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 271
Target Start/End: Complemental strand, 8876563 - 8876320
Alignment:
| Q |
30 |
ataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttc |
129 |
Q |
| |
|
|||||||||||||||||| | |||||| | ||||||||| |||||||| ||| |||||||||||||| || |||| |||||||||||||||| ||| |
|
|
| T |
8876563 |
ataccacaacctgctacgctcctcaggatcctttggtgatttctcacgaatgatttctcttcccatatctgtcaacaaatcatgcattccaagcatattc |
8876464 |
T |
|
| Q |
130 |
ttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcattt--aatacgagaataacatcatttct |
227 |
Q |
| |
|
| ||||| | | |||||||||| |||||||| || |||||||||||||| | ||||||| |||| ||||| |||| | ||||||||||||| |
|
|
| T |
8876463 |
ctttcatccatggttacaaggcttcgttcaacaagaacacttattccaatttcaggataaagttcacacccatttaaaatatatgtataacatcatttcg |
8876364 |
T |
|
| Q |
228 |
gtccattccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8876363 |
gtccatcccaataaagaaacaagctatgtcaaggaatatttctt |
8876320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 15801884 - 15801829
Alignment:
| Q |
73 |
tcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgtt |
128 |
Q |
| |
|
|||||||||||| |||||||||| ||||| |||| | |||||||||||||| |||| |
|
|
| T |
15801884 |
tcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagcttgtt |
15801829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 9898 - 10151
Alignment:
| Q |
18 |
cacatcctccggataccacaacctgctacgtttctcaggcctccttggtgattcctcacgaacaattcctcttcccatatctcgcagcaaaccatgcatt |
117 |
Q |
| |
|
||||||||| || |||| ||||| ||||| | |||||| ||||||||||| ||||||| ||| | |||||||||||||| | ||| |||||||| |
|
|
| T |
9898 |
cacatcctcttgaaaccataacctactacggtcctcaggatcccttggtgatttttcacgaatgatttcccttcccatatctcgtaataaatcatgcatt |
9997 |
T |
|
| Q |
118 |
ccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcataaagtccacagtcatttaatacgagaataa |
217 |
Q |
| |
|
||||| | ||||||||||| ||| | | |||||||| |||||||||||| |||||||| || | ||| |||||||||| ||||||||| | ||| |
|
|
| T |
9998 |
ccaagtgtattcttatcatcgacagttagaaggcttcgctcaacaaggacacttattccgatattagcaaaaagtccacatccatttaatatttgtgtaa |
10097 |
T |
|
| Q |
218 |
catcatttctgtccattccaattaagaaacaagctatgtcaaggaatatttctt |
271 |
Q |
| |
|
|||| |||| |||||| ||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
10098 |
catcgtttcggtccatcccaataaagaaacaagctatgtcaaggaatatatctt |
10151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 7165847 - 7165968
Alignment:
| Q |
76 |
cgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattc |
175 |
Q |
| |
|
||||||||| |||||||||| |||| |||||| |||||||||||||| |||| || | |||| |||||||||| | ||| || ||||| |||||| |
|
|
| T |
7165847 |
cgaacaatttctcttcccatgtctctaagcaaatcatgcattccaagcttgttattcttttcaattttcacaaggctccgctctacgaggaccgttattc |
7165946 |
T |
|
| Q |
176 |
caatttctgcataaagtccaca |
197 |
Q |
| |
|
|||| || |||||||||||||| |
|
|
| T |
7165947 |
caatgtcagcataaagtccaca |
7165968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 3363120 - 3363070
Alignment:
| Q |
73 |
tcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagc |
123 |
Q |
| |
|
|||||||||||| | |||||||| ||||| |||||| |||||||||||||| |
|
|
| T |
3363120 |
tcacgaacaatttcccttcccatgtctcgtagcaaagcatgcattccaagc |
3363070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 3392763 - 3392813
Alignment:
| Q |
73 |
tcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagc |
123 |
Q |
| |
|
|||||||||||| | |||||||| ||||| |||||| |||||||||||||| |
|
|
| T |
3392763 |
tcacgaacaatttcccttcccatgtctcgtagcaaatcatgcattccaagc |
3392813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 208
Target Start/End: Complemental strand, 5386 - 5266
Alignment:
| Q |
88 |
cttcccatatctcgcagcaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctctcaacaaggacgcttattccaatttctgcat |
187 |
Q |
| |
|
||||||||||||| || ||| ||||||||| |||| ||||| ||| |||||| | |||||||||| ||| |||||||| | |||||||| || ||| |
|
|
| T |
5386 |
cttcccatatctctcaacaagtcatgcattctaagcttgttcctattgtcaacagttacaaggcttcgctctacaaggactttaattccaatatccgcaa |
5287 |
T |
|
| Q |
188 |
aaagtccacagtcatttaata |
208 |
Q |
| |
|
||| ||||| ||||||||| |
|
|
| T |
5286 |
aaaacccacacccatttaata |
5266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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