View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4538-Insertion-10 (Length: 428)
Name: NF4538-Insertion-10
Description: NF4538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4538-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 36319665 - 36320086
Alignment:
| Q |
8 |
gagagcaatatgaaatctacggtaccattatagtttatagggaaatacatatatttctagcaacaatgttgagtcc-tgtagtcattttagagaaaatag |
106 |
Q |
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| T |
36319665 |
gagagcaatatgaaatctacggtaccattatagtttatagggaaatacatatatttctagcaacaatgttgagtccctgtagtcattttagagaaaatag |
36319764 |
T |
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| Q |
107 |
atgaatagagtagtattaaaattatacaagtaataatgttacatcaaagttgttgatgacaagggagttaaagttgcataaacactcctcaacactgtca |
206 |
Q |
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| T |
36319765 |
atgaatagagtagtattaaaattatacaagtaataatggtacatcaaagttgttgatgacaagggagttaaagttgcataaacactcctcaacactgtca |
36319864 |
T |
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| Q |
207 |
ataaaaaacccacaaaacatgttggaatgctagagcagcaccaaagaatgcaaccaatatcacagttacagttaaccgagttcctttgatttgtaaaagt |
306 |
Q |
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| T |
36319865 |
ataaaaaacccacaaaacatgttggaatgctagagcagcaccaaagaatgcaaccaatatcacagttacagttaaccgagttcctttgatttgtaaaaat |
36319964 |
T |
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| Q |
307 |
attgcaagtatcacatattatcatgaaaaaggaaacatagcaccatacaaagagaagggaccctttaaaaattatttagcataatcatggaaccagttac |
406 |
Q |
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| T |
36319965 |
attgcaagtatcacatattatcatgaaaaaggaaacatagcaccatacaaagagaagtgaccctttaaaaattatttagcataatcatggaaccagttac |
36320064 |
T |
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| Q |
407 |
caccttagttctagaaacaagc |
428 |
Q |
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| T |
36320065 |
caccttagttctagaaacaagc |
36320086 |
T |
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