View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4538_high_12 (Length: 253)
Name: NF4538_high_12
Description: NF4538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4538_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 17356875 - 17356633
Alignment:
| Q |
1 |
cagagaataaagttcaaattcccttggagttgtaaaaagactattagaagcaagaaattacgggtttgaattcgcatatcccatccagtcttttactatt |
100 |
Q |
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| T |
17356875 |
cagagaataaagttcaaattcccttggagttgtaaaaagactattagaagcaagaaattacgggtttgaattcgcatatcccatccaatcttttaccatt |
17356776 |
T |
|
| Q |
101 |
tgaactgtacttacgggactccttttccctaatttttaacgaaataatatttaccgacaacttttacattatatgtgataatatacattatatacttgct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
17356775 |
tgaactgtacttacgggactccttttccctaatttttaacgaaagaatatttaccgacaacttttacattatatgtgataatatacattatatatttgct |
17356676 |
T |
|
| Q |
201 |
tacttgagacatatttaagaacccaagctcaatttctcctttg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17356675 |
tacttgagacatatttaagaacccaagctcaatttctcctttg |
17356633 |
T |
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