View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4538_high_8 (Length: 341)

Name: NF4538_high_8
Description: NF4538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4538_high_8
NF4538_high_8
[»] chr7 (26 HSPs)
chr7 (1-324)||(10481371-10481694)
chr7 (206-317)||(17842665-17842775)
chr7 (209-324)||(37109847-37109961)
chr7 (209-330)||(7334769-7334889)
chr7 (206-322)||(18797301-18797414)
chr7 (210-322)||(38258521-38258632)
chr7 (207-324)||(32821125-32821241)
chr7 (241-330)||(38053493-38053581)
chr7 (210-323)||(24211717-24211829)
chr7 (209-330)||(27283719-27283839)
chr7 (209-330)||(37346997-37347117)
chr7 (207-330)||(30055499-30055622)
chr7 (211-290)||(44413484-44413564)
chr7 (208-324)||(43686015-43686129)
chr7 (209-324)||(5657553-5657667)
chr7 (209-324)||(4582894-4583008)
chr7 (211-322)||(23111167-23111277)
chr7 (225-324)||(31520795-31520893)
chr7 (208-290)||(31579174-31579256)
chr7 (211-324)||(27421451-27421563)
chr7 (211-330)||(11071182-11071301)
chr7 (207-330)||(9355892-9356014)
chr7 (207-317)||(12390709-12390818)
chr7 (206-275)||(26524447-26524516)
chr7 (211-264)||(8299192-8299245)
chr7 (209-305)||(8861260-8861355)
[»] chr8 (30 HSPs)
chr8 (72-205)||(4953395-4953526)
chr8 (209-322)||(10555281-10555393)
chr8 (225-330)||(23854502-23854606)
chr8 (207-312)||(43643684-43643788)
chr8 (206-324)||(36695043-36695160)
chr8 (209-330)||(12876108-12876228)
chr8 (215-323)||(37970597-37970704)
chr8 (207-330)||(1204924-1205046)
chr8 (3-78)||(4953543-4953618)
chr8 (209-324)||(6098595-6098709)
chr8 (208-324)||(1150182-1150297)
chr8 (207-324)||(9864145-9864261)
chr8 (208-323)||(30654661-30654775)
chr8 (210-324)||(31933963-31934076)
chr8 (207-324)||(40862416-40862533)
chr8 (208-317)||(16446959-16447067)
chr8 (208-324)||(34952108-34952223)
chr8 (236-323)||(8803888-8803974)
chr8 (207-330)||(16222860-16222982)
chr8 (211-276)||(7891072-7891137)
chr8 (209-324)||(13307622-13307736)
chr8 (207-290)||(38643975-38644058)
chr8 (208-330)||(27082909-27083030)
chr8 (207-289)||(34894964-34895046)
chr8 (211-324)||(465843-465955)
chr8 (209-274)||(15009241-15009306)
chr8 (210-275)||(35459823-35459888)
chr8 (209-273)||(5300073-5300137)
chr8 (205-265)||(24823407-24823467)
chr8 (209-262)||(41362517-41362570)
[»] chr4 (32 HSPs)
chr4 (207-323)||(34361589-34361704)
chr4 (207-328)||(50697240-50697360)
chr4 (207-290)||(4396324-4396407)
chr4 (208-312)||(25184112-25184215)
chr4 (207-330)||(25701148-25701270)
chr4 (207-324)||(3042609-3042725)
chr4 (205-330)||(55477982-55478110)
chr4 (207-323)||(32912678-32912793)
chr4 (207-305)||(35021151-35021248)
chr4 (207-312)||(4205114-4205218)
chr4 (211-324)||(36493785-36493897)
chr4 (205-317)||(27396612-27396723)
chr4 (208-330)||(37663832-37663951)
chr4 (209-330)||(19440739-19440860)
chr4 (209-330)||(19089544-19089664)
chr4 (233-290)||(53124311-53124368)
chr4 (208-317)||(879652-879760)
chr4 (206-322)||(9139244-9139357)
chr4 (207-290)||(7152236-7152319)
chr4 (209-324)||(7703517-7703631)
chr4 (211-322)||(17167715-17167825)
chr4 (211-322)||(17173292-17173402)
chr4 (209-324)||(39397918-39398032)
chr4 (207-324)||(29584297-29584411)
chr4 (211-330)||(47253751-47253868)
chr4 (208-322)||(37287732-37287846)
chr4 (207-258)||(47073656-47073707)
chr4 (209-275)||(46884179-46884245)
chr4 (235-288)||(6864061-6864114)
chr4 (207-324)||(30002721-30002837)
chr4 (209-274)||(53337559-53337624)
chr4 (205-273)||(17272007-17272075)
[»] chr1 (36 HSPs)
chr1 (211-330)||(15752027-15752145)
chr1 (208-330)||(18422646-18422767)
chr1 (207-330)||(37618954-37619078)
chr1 (207-322)||(32267028-32267142)
chr1 (233-324)||(37451306-37451396)
chr1 (206-292)||(8222124-8222210)
chr1 (208-330)||(10182068-10182189)
chr1 (232-330)||(28564841-28564938)
chr1 (238-324)||(51128884-51128969)
chr1 (205-322)||(10922719-10922835)
chr1 (207-330)||(1547281-1547403)
chr1 (207-324)||(15382927-15383043)
chr1 (209-322)||(42721035-42721147)
chr1 (209-324)||(30327018-30327132)
chr1 (208-330)||(2959743-2959864)
chr1 (208-322)||(19899837-19899950)
chr1 (209-323)||(23999343-23999456)
chr1 (208-329)||(30254419-30254538)
chr1 (211-290)||(28769651-28769730)
chr1 (211-324)||(238579-238690)
chr1 (208-309)||(30254853-30254952)
chr1 (209-290)||(3309144-3309225)
chr1 (241-326)||(27563969-27564053)
chr1 (232-322)||(9903122-9903211)
chr1 (207-273)||(22170748-22170814)
chr1 (241-323)||(46931439-46931520)
chr1 (209-290)||(7079173-7079254)
chr1 (241-290)||(27763409-27763458)
chr1 (251-308)||(32216093-32216149)
chr1 (207-324)||(48620631-48620747)
chr1 (207-323)||(16415639-16415755)
chr1 (209-273)||(38823210-38823274)
chr1 (207-289)||(34012477-34012559)
chr1 (207-324)||(3534926-3535042)
chr1 (207-324)||(11742416-11742532)
chr1 (225-324)||(27267265-27267361)
[»] chr3 (28 HSPs)
chr3 (208-330)||(3655267-3655388)
chr3 (208-330)||(40552324-40552445)
chr3 (211-308)||(46297849-46297945)
chr3 (209-330)||(51213046-51213166)
chr3 (207-330)||(48354930-48355052)
chr3 (208-330)||(26941325-26941446)
chr3 (209-330)||(20373361-20373481)
chr3 (207-324)||(34132924-34133040)
chr3 (207-317)||(35844315-35844424)
chr3 (209-330)||(37203058-37203178)
chr3 (242-317)||(47481546-47481620)
chr3 (207-330)||(4761714-4761838)
chr3 (235-312)||(29099372-29099448)
chr3 (209-290)||(37157699-37157780)
chr3 (225-305)||(11357454-11357534)
chr3 (235-323)||(54505825-54505912)
chr3 (255-330)||(42506140-42506214)
chr3 (252-290)||(41585411-41585449)
chr3 (207-277)||(55343401-55343471)
chr3 (209-330)||(4015451-4015571)
chr3 (205-261)||(21193593-21193649)
chr3 (206-290)||(54828805-54828888)
chr3 (212-290)||(22446168-22446247)
chr3 (208-273)||(7327603-7327669)
chr3 (257-323)||(21009874-21009939)
chr3 (205-330)||(39282640-39282763)
chr3 (209-285)||(27480488-27480564)
chr3 (209-257)||(49359628-49359676)
[»] chr5 (33 HSPs)
chr5 (207-324)||(5112374-5112490)
chr5 (203-324)||(36860417-36860537)
chr5 (208-324)||(1429206-1429321)
chr5 (210-317)||(31705679-31705785)
chr5 (207-305)||(12910348-12910445)
chr5 (208-330)||(39572818-39572939)
chr5 (209-290)||(26317778-26317859)
chr5 (207-330)||(22974137-22974259)
chr5 (207-330)||(35826538-35826660)
chr5 (209-324)||(36866762-36866876)
chr5 (207-330)||(24886100-24886224)
chr5 (207-330)||(22255179-22255302)
chr5 (225-329)||(27318543-27318646)
chr5 (208-317)||(17158098-17158209)
chr5 (207-324)||(8741947-8742064)
chr5 (206-305)||(13956425-13956523)
chr5 (209-312)||(15724490-15724592)
chr5 (251-324)||(699192-699264)
chr5 (207-324)||(38528297-38528413)
chr5 (233-330)||(5829921-5830021)
chr5 (207-330)||(14919583-14919706)
chr5 (206-324)||(27330303-27330418)
chr5 (209-324)||(40133385-40133499)
chr5 (211-324)||(7208924-7209037)
chr5 (209-322)||(7693230-7693342)
chr5 (207-324)||(19119857-19119973)
chr5 (209-305)||(23116302-23116397)
chr5 (209-275)||(16004485-16004552)
chr5 (251-290)||(22255617-22255656)
chr5 (252-290)||(5748478-5748516)
chr5 (208-317)||(9200232-9200340)
chr5 (209-290)||(14409420-14409501)
chr5 (206-330)||(30969379-30969502)
[»] chr6 (9 HSPs)
chr6 (207-323)||(5627389-5627504)
chr6 (207-322)||(4318895-4319009)
chr6 (205-323)||(1945829-1945947)
chr6 (208-323)||(7055286-7055400)
chr6 (209-324)||(33893072-33893186)
chr6 (208-324)||(8513232-8513347)
chr6 (208-322)||(3880011-3880124)
chr6 (212-324)||(6091253-6091363)
chr6 (209-258)||(24662189-24662238)
[»] chr2 (23 HSPs)
chr2 (209-317)||(33551082-33551189)
chr2 (209-323)||(35958909-35959022)
chr2 (207-329)||(19289407-19289523)
chr2 (209-330)||(37905709-37905828)
chr2 (205-324)||(4166918-4167036)
chr2 (206-305)||(29242246-29242344)
chr2 (211-324)||(33660457-33660569)
chr2 (209-327)||(26357577-26357694)
chr2 (242-324)||(43648334-43648415)
chr2 (208-323)||(11366471-11366585)
chr2 (208-317)||(17054192-17054300)
chr2 (211-330)||(3176941-3177059)
chr2 (241-324)||(27350027-27350109)
chr2 (208-317)||(17071833-17071941)
chr2 (208-324)||(4264166-4264281)
chr2 (207-330)||(2325453-2325575)
chr2 (207-290)||(18494390-18494473)
chr2 (235-329)||(33902094-33902185)
chr2 (206-257)||(34441921-34441972)
chr2 (207-330)||(39167446-39167568)
chr2 (206-273)||(41960880-41960947)
chr2 (209-322)||(44913662-44913774)
chr2 (206-330)||(36641983-36642106)
[»] scaffold0291 (1 HSPs)
scaffold0291 (235-330)||(7913-8007)
[»] scaffold0002 (1 HSPs)
scaffold0002 (208-330)||(133-254)
[»] scaffold0022 (1 HSPs)
scaffold0022 (235-323)||(146088-146175)
[»] scaffold0061 (1 HSPs)
scaffold0061 (238-330)||(43986-44077)
[»] scaffold0017 (1 HSPs)
scaffold0017 (238-330)||(154710-154801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (207-274)||(100819-100886)


Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 10481371 - 10481694
Alignment:
Q  1 attaatttatgtgagtggcttatgagtcatccaatttacaatactaatgaccataaaatattaattcttaccccttttaaactggtcttcatgcggtcat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10481371 attaatttatgtgagtggcttatgagtcatccaatttacaatactaatgaccataaaatattaattcttaccccttttaaactggtcttcatgccgtcat 10481470  T
Q  101 ctatcataaggaattattggttctaagagttttctatttttaaaattgtatatgaaattgggtaaggaccccaagataccacaactcttctataggattg 200  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||  ||||||| ||||  ||||||||||| ||||||||    
T  10481471 ctatcataaggaattattggttctaagagttttttattttcaaaattgtttatgaaattgggtagagaccccaggata-aacaactcttctgtaggattg 10481569  T
Q  201 acacataaggaaaattctatcgtaaagtcaggaaaatgac-ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtt 299  Q
    |||||||||||||||||||| ||||||| |||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  10481570 acacataaggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaatataatgagtaacacccccactgtt 10481669  T
Q  300 tgtacaatgacattaaaaattcagt 324  Q
    ||||||||||||| |||||||||||    
T  10481670 tgtacaatgacatcaaaaattcagt 10481694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 17842775 - 17842665
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||| || ||||||  |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  17842775 taaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtaca 17842677  T
Q  306 atgacattaaaa 317  Q
    ||||||| ||||    
T  17842676 atgacatcaaaa 17842665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 37109847 - 37109961
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || ||||||  |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtacaatg 37109945  T
Q  309 acattaaaaattcagt 324  Q
    |||| |||| ||||||    
T  37109946 acatcaaaagttcagt 37109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 7334769 - 7334889
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||  || |||||  || ||||||||||||  | |||||||||||||||||||||| || |||||||||||||| | |||||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacacc-ccactgtttgtacaatg 7334867  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| ||||||||||||    
T  7334868 acatcaaaagttcagttctcat 7334889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 18797301 - 18797414
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||| || |||||| || |||||||||||| || ||||||||||  ||||||||||||| |||||||||||||| | ||||||||||||    
T  18797301 taaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacac--taacataaaaaatgtaatgagtaacacc-ccactgtttgtaca 18797397  T
Q  306 atgacattaaaaattca 322  Q
    ||||||| |||| ||||    
T  18797398 atgacatcaaaagttca 18797414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 38258521 - 38258632
Alignment:
Q  210 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 309  Q
    ||||||||||  || ||||||  ||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccac-accgtttgtacaatga 38258619  T
Q  310 cattaaaaattca 322  Q
    ||| |||| ||||    
T  38258620 catcaaaagttca 38258632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 32821241 - 32821125
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| |||||||| |||||| || ||||||||| |||||||| |||||| || ||||||||| ||| |||||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaaca-caccactgtttgtacaa 32821143  T
Q  307 tgacattaaaaattcagt 324  Q
    || ||| |||| ||||||    
T  32821142 tggcatcaaaagttcagt 32821125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 38053493 - 38053581
Alignment:
Q  241 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcat 330  Q
    |||||| || ||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||    
T  38053493 ttttttggtgaagttaatactataacataaaaaatgtaatgagtaaaacc-ctactgtttgtacaatgacatcaaaagttcagttctcat 38053581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 24211717 - 24211829
Alignment:
Q  210 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 309  Q
    ||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||||||||| || ||||     
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ctactgtttatagaatgg 24211815  T
Q  310 cattaaaaattcag 323  Q
    ||| |||| |||||    
T  24211816 catcaaaagttcag 24211829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 27283719 - 27283839
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||| |  ||||||| |||||| || |||||||||||||||||| |||||| |||||||||||||| | || ||||||||||||    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccaccgtttgtacaatg 27283817  T
Q  309 acattaaaaattcagttctcat 330  Q
    | || |||| |||||| |||||    
T  27283818 aaatcaaaagttcagtcctcat 27283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 37346997 - 37347117
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||| ||| || |||||| |||||||| |||||| || ||||||| |||||| ||| ||||||||||||||||||||| | | |||||||||| ||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacacc-ccattgtttgtacagtg 37347095  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| |||||| |||||    
T  37347096 acatcaaaagttcagtcctcat 37347117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 30055499 - 30055622
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||||||| || ||||||  | |||||||||||| | | ||||||||||||||| || |||| | |||||||||||||| | ||||||||||||    
T  30055499 aaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacacccc-actgtttgtaca 30055597  T
Q  306 atgacattaaaaattcagttctcat 330  Q
    ||||||| |||| |||||| |||||    
T  30055598 atgacatcaaaagttcagtcctcat 30055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 44413564 - 44413484
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgactttttt-agttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||| ||||||||| ||||||||||||||| | | |||||||||||||||||| ||||||||| |||||||||||    
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacacc 44413484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 43686015 - 43686129
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| ||||||||||||||  || ||||||||||||||| || |||||| |  ||||||||||  | ||||||||||||||    
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacac--ccactgtttgtacaat 43686112  T
Q  308 gacattaaaaattcagt 324  Q
    | ||| |||| ||||||    
T  43686113 ggcatcaaaagttcagt 43686129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 5657667 - 5657553
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| || |||||||||| |||| |||||||||||||||||| |||| | |  ||||||||||| | |||||||||||| ||    
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtg 5657569  T
Q  309 acattaaaaattcagt 324  Q
     ||| |||| ||||||    
T  5657568 gcatcaaaagttcagt 5657553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 4582894 - 4583008
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||| ||||||  || |||||| |  ||||||||||| | ||| |||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacacc-ccactatttgtacaatg 4582992  T
Q  309 acattaaaaattcagt 324  Q
    |||| |||| ||||||    
T  4582993 acatcaaaagttcagt 4583008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 23111167 - 23111277
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||| | || |||||| |||||||| |||| | || |||||||||||||||||| ||||||||  ||||||||| ||| ||| ||||||||||| |    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaaca-caccactatttgtacaatggc 23111265  T
Q  311 attaaaaattca 322  Q
    || |||| ||||    
T  23111266 atcaaaagttca 23111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 324
Target Start/End: Complemental strand, 31520893 - 31520795
Alignment:
Q  225 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||| ||||||||||||||| || ||||||| |||||| ||| ||||||||| ||||||||| | | | |||||||||| |||||| |||| ||||||    
T  31520893 aagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaaca-ctccattgtttgtacagtgacatcaaaagttcagt 31520795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 31579256 - 31579174
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    ||||||||||||| || ||||||  | ||| | |||||| || |||||||||||||||||| |||||| ||||||||||||||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc 31579174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 27421563 - 27421451
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||||  || ||||| |||||| || |||||||||||||||||| |||| | |  ||||||||| | | |||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaaca-ctccactgtttgtacaatgac 27421465  T
Q  311 attaaaaattcagt 324  Q
    || |||| ||||||    
T  27421464 atcaaaagttcagt 27421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 330
Target Start/End: Original strand, 11071182 - 11071301
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatg-acttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 309  Q
    |||||||||| || |||||| ||||||| | |||||| || ||||||  |||||| ||| |||||||||  |||||||||  | |||||||||||| |||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactcc-actgtttgtacagtga 11071280  T
Q  310 cattaaaaattcagttctcat 330  Q
    ||| |||| ||||||||||||    
T  11071281 catcaaaagttcagttctcat 11071301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 9356014 - 9355892
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| ||| || |||||| || ||||||  |||| || || ||||||||||| |||||||||| || |||| || ||| | ||||||||||||     
T  9356014 aaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaatacc-ccactgtttgtacag 9355916  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    |||||| |||| || |||||||||    
T  9355915 tgacatcaaaagtttagttctcat 9355892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 12390818 - 12390709
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || ||||||  | |  ||||||||| || |||||||||||||||||| |||| | |||||||||||| | | ||||||||| ||     
T  12390818 aaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatc-ccactgtttgtgcag 12390720  T
Q  307 tgacattaaaa 317  Q
    |||||| ||||    
T  12390719 tgacatcaaaa 12390709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 26524516 - 26524447
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 275  Q
    ||||||||||||||| || |||||| || |||||||||| | || | |||||||||||||||| ||||||    
T  26524516 taaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaat 26524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 8299192 - 8299245
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactata 264  Q
    |||||||||| || |||||| ||||||||||||| | || ||||||||||||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactata 8299245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 8861260 - 8861355
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||||| || |||||| || |||||||||| | |  |||||||||||||| ||| |||| | | |||| ||||||| | ||||||||||||    
T  8861260 ggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacacc-ccactgtttgtaca 8861355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 4953526 - 4953395
Alignment:
Q  72 cccttttaaactggtcttcatgcggtcatctatcataaggaattattggttctaagagttttctatttttaaaattgtatatgaaattgggtaaggaccc 171  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||  ||||| |||||||  |||| || |||||| ||||||    
T  4953526 cccttttaaactggtcttcatgccgtcatatatcataagaaattattagttctaagagtttttaattttcaaaattgcttatgtaa-tgggtagggaccc 4953428  T
Q  172 caagataccacaactcttctataggattgacaca 205  Q
    |||||||  ||||||||| |||||||||||||||    
T  4953427 caagata-aacaactcttatataggattgacaca 4953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 10555393 - 10555281
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||  || |||||| || |||||||||||| || ||||||||||||||||||||||||| |||||||||||| | | |||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccactgtttgtacaatg 10555295  T
Q  309 acattaaaaattca 322  Q
    |||| |||| ||||    
T  10555294 acatcaaaagttca 10555281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 23854606 - 23854502
Alignment:
Q  225 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||| || |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||| |||| ||||||    
T  23854606 aagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-caactgtttgtgcaatgacatcaaaagttcagt 23854508  T
Q  325 tctcat 330  Q
     |||||    
T  23854507 cctcat 23854502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 43643788 - 43643684
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || ||||||| |||| || |||||||||||||||||| |||||| |||||||||||| | |||||||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctctactgtttgtacaa 43643690  T
Q  307 tgacat 312  Q
    ||||||    
T  43643689 tgacat 43643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 324
Target Start/End: Complemental strand, 36695160 - 36695043
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||| || |||||||||||||||||||| |  | ||||||||||||||| || |||||| |  ||||||||||| | ||||||||||||    
T  36695160 taaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacacc-ccactgtttgtaca 36695062  T
Q  306 atgacattaaaaattcagt 324  Q
    ||||||| |||| ||||||    
T  36695061 atgacatcaaaagttcagt 36695043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 12876108 - 12876228
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| ||||||||||||| |  | ||||||||||||||| ||||||||| |  ||||||||||| | |||||||||||||||    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacc-caactgtttgtacaatg 12876206  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| |||||| |||||    
T  12876207 acatcaaaagttcagtcctcat 12876228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 37970704 - 37970597
Alignment:
Q  215 ttctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacatta 314  Q
    |||||| || |||||| || |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||| ||| |    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtacaatgccatca 37970606  T
Q  315 aaaattcag 323  Q
    ||| |||||    
T  37970605 aaagttcag 37970597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 1204924 - 1205046
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| ||  || |||||| || |||||||||| | || ||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||    
T  1204924 aaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaaca-catcactgtttgtacaa 1205022  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    |||||| |||| |||||| |||||    
T  1205023 tgacatcaaaagttcagtcctcat 1205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 4953618 - 4953543
Alignment:
Q  3 taatttatgtgagtggcttatgagtcatccaatttacaatactaatgaccataaaatattaattcttacccctttt 78  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||    
T  4953618 taatttatgttaatggcttatgagtcatctaatttacaatactaatgaccatacaatataaattcttaaccctttt 4953543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 6098709 - 6098595
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| |||||| |||||||| || ||||||| |||||| ||| ||||||||| ||||||||||| | |||||||||||| ||    
T  6098709 ggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacacc-ccactgtttgtacagtg 6098611  T
Q  309 acattaaaaattcagt 324  Q
    |||| |||| ||||||    
T  6098610 acatcaaaagttcagt 6098595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 1150297 - 1150182
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | |||||||||||| || |||||||| ||||||||| |||||| |||||||||||| | | |||||||||||||     
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatc-ccactgtttgtacaac 1150199  T
Q  308 gacattaaaaattcagt 324  Q
    ||||| |||| ||||||    
T  1150198 gacatcaaaagttcagt 1150182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 9864145 - 9864261
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    ||||||||||||||  | |||||| ||||||||||||||| || || |||||||||||  || |||||| |  ||||||||||| | |||||||||||||    
T  9864145 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacacc-ccactgtttgtacaa 9864243  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  9864244 tgacatcaaaagttcagt 9864261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 30654775 - 30654661
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||| ||| || ||||||  | | ||| |||||| || ||||||||||||||||||||||||| |||||||||||||| | |||||||||  |||    
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccactgtttgttgaat 30654677  T
Q  308 gacattaaaaattcag 323  Q
    ||||| |||| |||||    
T  30654676 gacatcaaaagttcag 30654661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 31934076 - 31933963
Alignment:
Q  210 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 309  Q
    |||||||||| ||| |||| | || ||||| |||||| || ||||||||||||| | || ||||||||||||||||||||| | ||| ||| ||||||||    
T  31934076 gaaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacacc-ccactctttatacaatga 31933978  T
Q  310 cattaaaaattcagt 324  Q
    ||| |||| ||||||    
T  31933977 catcaaaagttcagt 31933963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 40862416 - 40862533
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacat-aaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||||||| || |||||| |||||| |||||| | || ||||||||||||||| || ||||||| |  ||||||||||| | ||||||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacacc-ccactgtttgtaca 40862514  T
Q  306 atgacattaaaaattcagt 324  Q
    ||| ||| |||| ||||||    
T  40862515 atggcatcaaaagttcagt 40862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 16447067 - 16446959
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||||| | |||||||||| |||    
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacacc-ccactgtttgtataat 16446969  T
Q  308 gacattaaaa 317  Q
    | ||| ||||    
T  16446968 ggcatcaaaa 16446959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 34952223 - 34952108
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| |||||||||  |||||||||||| | || |||||||||||||| ||| |||| | |  ||||||||| | | |||||||||||| |    
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagc-ccactgtttgtacagt 34952125  T
Q  308 gacattaaaaattcagt 324  Q
    ||||| |||| ||||||    
T  34952124 gacatcaaaagttcagt 34952108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 323
Target Start/End: Complemental strand, 8803974 - 8803888
Alignment:
Q  236 atgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 323  Q
    ||||||||||| || |||||||||||||||||| |||||| |||||||||||| | | ||| |||||| |||||||| |||| |||||    
T  8803974 atgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctccactatttgtagaatgacatcaaaagttcag 8803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 16222860 - 16222982
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||  || || ||| || |||||||||| | || || ||||||||||||||||||||||||| ||||||   || | || ||||||||||    
T  16222860 aaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttcc-ccacagtttgtacaa 16222958  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    |||||| |||| |||||| |||||    
T  16222959 tgacatcaaaagttcagtcctcat 16222982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 7891137 - 7891072
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaata 276  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||||||| |||||||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaata 7891072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 13307622 - 13307736
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| || ||||| |||| | || |||||||||||||||||| |||| | |  ||||||||||| | ||| |||||||| ||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctc-actatttgtacagtg 13307720  T
Q  309 acattaaaaattcagt 324  Q
    |||| |||| ||||||    
T  13307721 acatcaaaagttcagt 13307736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 38643975 - 38644058
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||||| || || ||| || |||||||||||| || |||||||||||||||||| |||| | |  |||||||||||    
T  38643975 aaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacacc 38644058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 27083030 - 27082909
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | | |||||||| | || |||||||||||||| ||| |||| | || ||||||||||| | ||||||||| || |    
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacacc-ccactgtttgtgcagt 27082932  T
Q  308 gacattaaaaattcagttctcat 330  Q
    | |||||||| |||||| |||||    
T  27082931 ggcattaaaagttcagtcctcat 27082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 34894964 - 34895046
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac 289  Q
    |||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| || | | || ||||||||||    
T  34894964 aaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacac 34895046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 324
Target Start/End: Original strand, 465843 - 465955
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||| ||| || ||||||  |||||||||||| | || |||||||||| ||||||| |||| | |  ||||||||||| | |||||||||||| || |    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtggc 465941  T
Q  311 attaaaaattcagt 324  Q
    || |||||||||||    
T  465942 atcaaaaattcagt 465955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 15009241 - 15009306
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 274  Q
    |||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaa 15009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 35459888 - 35459823
Alignment:
Q  210 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 275  Q
    ||||||||||| || |||||| || |||||||||||| || ||||||| ||||||| |||||||||    
T  35459888 gaaaattctatggtgaagtcatgagaatgacttttttcgtaaagttaatactataatataaaaaat 35459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 5300137 - 5300073
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 273  Q
    |||||||||||| || |||||| || ||||||||||||| | |||||||||||||| ||| ||||    
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaa 5300073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 24823467 - 24823407
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataa 265  Q
    ||||||||||| |||| ||||||| | || |||||||||||| || |||||||||||||||    
T  24823467 ataaggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataa 24823407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 41362517 - 41362570
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacacta 262  Q
    |||||||||||| || |||| | ||||||||||||||| || ||||||||||||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacacta 41362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 34361704 - 34361589
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || ||||||  | |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||    
T  34361704 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccactgtttgtagaa 34361606  T
Q  307 tgacattaaaaattcag 323  Q
    ||||||||||| |||||    
T  34361605 tgacattaaaagttcag 34361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 207 - 328
Target Start/End: Original strand, 50697240 - 50697360
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||  || ||||||  ||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  50697240 aaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacacc-ctaccgtttgtacaa 50697338  T
Q  307 tgacattaaaaattcagttctc 328  Q
    |||||| |||| |||| |||||    
T  50697339 tgacatcaaaagttcaattctc 50697360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 4396324 - 4396407
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||||| || ||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4396324 aaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacacc 4396407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 25184112 - 25184215
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| || ||||||| |||| || |||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||    
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctctactgtttgtacaat 25184210  T
Q  308 gacat 312  Q
    |||||    
T  25184211 gacat 25184215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 25701270 - 25701148
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| ||| || |||||| || |||||||||||| || ||||||||| |||||||| |||| | || ||||||||||| ||||||||||||||     
T  25701270 aaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacacc-ctactgtttgtacag 25701172  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    |||||| |||| |||||| |||||    
T  25701171 tgacatcaaaagttcagtcctcat 25701148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 3042609 - 3042725
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || || |||  ||||||| |||||| || ||||||||||||||||||| ||||| |||||||||| ||| | || |||| |||||    
T  3042609 aaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaatacc-ccaccgtttatacaa 3042707  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||||||||||    
T  3042708 tgacatcaaaaattcagt 3042725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 330
Target Start/End: Complemental strand, 55478110 - 55477982
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaaca--ccact-actgtttg 301  Q
    |||||||||||||||| || |||||| || ||||| |||||| || |||||||||||||||||| |||||| ||| ||||||||  |||||   ||||||    
T  55478110 ataaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttg 55478011  T
Q  302 tacaatgacattaaaaattcagttctcat 330  Q
    ||||||||||| |||| |||||| |||||    
T  55478010 tacaatgacatcaaaagttcagtcctcat 55477982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 32912793 - 32912678
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||| | |||||| ||    
T  32912793 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ctagtatttgtagaa 32912695  T
Q  307 tgacattaaaaattcag 323  Q
    ||| || |||| |||||    
T  32912694 tgatatcaaaagttcag 32912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 35021248 - 35021151
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||||||| || |||||| ||||||||||||| | || ||||||||| |||||||| |||||| || ||||||||| ||| ||||||||||||    
T  35021248 aaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaaca-caccactgtttgtaca 35021151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 312
Target Start/End: Original strand, 4205114 - 4205218
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||||||||||||||||| |  | ||||||||||||||| || |||||| |  ||| ||||||| | |||||||||||||    
T  4205114 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacacc-ccactgtttgtacaa 4205212  T
Q  307 tgacat 312  Q
    ||||||    
T  4205213 tgacat 4205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 36493897 - 36493785
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||||| |||||| |||||||| || ||||||| |||||| ||| ||||||||| ||||||||||| | | |||||||||| ||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacacc-ccattgtttgtacagtgac 36493799  T
Q  311 attaaaaattcagt 324  Q
    || |||| ||||||    
T  36493798 atcaaaagttcagt 36493785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 27396612 - 27396723
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    ||||| |||||||||| || |||||| || |||||||||| | || ||||||||| |||| ||| |||| | | |||||||||||| |||||||||||||    
T  27396612 ataagaaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacacc-ctactgtttgtac 27396710  T
Q  305 aatgacattaaaa 317  Q
    |||||||| ||||    
T  27396711 aatgacatcaaaa 27396723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 37663951 - 37663832
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | ||||||||||||  | ||||||||||||  |||| |||| | |||||||||||||| | ||||||||||||||    
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacacccc-actgtttgtacaat 37663855  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| |||||| |||||    
T  37663854 gacatcaaaagttcagtcctcat 37663832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 19440860 - 19440739
Alignment:
Q  209 ggaaaattctatcgt-aaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    |||||||||||| || ||||||| || |||||||||||| || | |||||||||||||||| |||||| |||||| ||||| | | || |||||||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaaca-ctccaccgtttgtacaat 19440762  T
Q  308 gacattaaaaattcagttctcat 330  Q
    | ||| |||| |||||| |||||    
T  19440761 ggcatcaaaagttcagtcctcat 19440739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 19089664 - 19089544
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || ||||||  | ||| ||||||||  | ||||||||||||||| || |||| | |||||||||||||| | |||||||||| ||||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacacc-ccactgtttgtataatg 19089566  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| |||||| |||||    
T  19089565 acatcaaaagttcagtcctcat 19089544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 53124311 - 53124368
Alignment:
Q  233 aaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    ||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||    
T  53124311 aaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacc 53124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 879760 - 879652
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||| ||  || |||||| || ||| | |||||| || |||| ||||||||||||| |||||| |||||||||||||| | | ||||||||||||    
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctc-attgtttgtacaat 879662  T
Q  308 gacattaaaa 317  Q
    ||||| ||||    
T  879661 gacatcaaaa 879652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 322
Target Start/End: Original strand, 9139244 - 9139357
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||| || |||||| |||| |||||||||| || ||||||||  |||| ||||||||  ||| ||||||||||| | || |||||||||    
T  9139244 taaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaa--atagtgagtaacacc-ccaccgtttgtaca 9139340  T
Q  306 atgacattaaaaattca 322  Q
     |||||| |||| ||||    
T  9139341 gtgacataaaaagttca 9139357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 7152319 - 7152236
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||||| || |||||| |  |||||||||| | || ||||||||| |||||||| |||| |||| |||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacacc 7152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 7703517 - 7703631
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    ||||||||||||  |||||||| || |||||||||| | || |||||||||||||||||| |||| | |  | ||||||||| | |||||||||||  ||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacacc-ccactgtttgtacggtg 7703615  T
Q  309 acattaaaaattcagt 324  Q
    |||| |||| ||||||    
T  7703616 acatcaaaagttcagt 7703631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 17167715 - 17167825
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||||| ||||| || |||||| |  ||||||||||| | |||||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacacc-ccactgtttgtacaatgac 17167813  T
Q  311 attaaaaattca 322  Q
    || |||| ||||    
T  17167814 atcaaaagttca 17167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 17173292 - 17173402
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||||| ||||| || |||||| |  ||||||||||| | |||||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacacc-ccactgtttgtacaatgac 17173390  T
Q  311 attaaaaattca 322  Q
    || |||| ||||    
T  17173391 atcaaaagttca 17173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 39397918 - 39398032
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || ||||||  | |||||||||| | || |||||||||||||||||| |||| | |  ||||||||||| | | |||||||||| ||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacacc-ccattgtttgtacagtg 39398016  T
Q  309 acattaaaaattcagt 324  Q
    |||| |||| ||||||    
T  39398017 acatcaaaagttcagt 39398032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 29584411 - 29584297
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| |||| | |  ||||||||||| | |||||||||||||    
T  29584411 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctc-actgtttgtacaa 29584315  T
Q  307 tgacattaaaaattcagt 324  Q
    || ||| |||| ||||||    
T  29584314 tggcatcaaaagttcagt 29584297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 330
Target Start/End: Original strand, 47253751 - 47253868
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||| ||| |||| | |  ||||||||||  | | ||||| |||| ||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaacac--ccattgtttatacagtgac 47253848  T
Q  311 attaaaaattcagttctcat 330  Q
    || |||| |||||| |||||    
T  47253849 atcaaaagttcagtcctcat 47253868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 37287732 - 37287846
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaa-gttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    ||||||||||||| || |||| | || |||||||||||| | ||| |||||||||||||||| |||| | |  ||||||||||| | ||||||||||||     
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacag 37287830  T
Q  307 tgacattaaaaattca 322  Q
    || ||| |||| ||||    
T  37287831 tggcatcaaaagttca 37287846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 47073707 - 47073656
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaac 258  Q
    |||||||||||||| ||||||||| || |||||||||||| || ||||||||    
T  47073707 aaggaaaattctatggtaaagtcatgataatgacttttttggtgaagttaac 47073656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 46884245 - 46884179
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 275  Q
    |||||||||||| || ||||||  |||||||||||||| |  ||||||||||  |||||||||||||    
T  46884245 ggaaaattctatagtgaagtcataaaaatgacttttttggcgaagttaacaccgtaacataaaaaat 46884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 6864061 - 6864114
Alignment:
Q  235 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaaca 288  Q
    |||||||||||| || |||||| ||||||||||| |||||| |||||| |||||    
T  6864061 aatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataaca 6864114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 30002837 - 30002721
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||| ||||| || ||||||  ||||||| |||| | || ||||||||||| || ||| |||| | |  ||||||||||| | ||||||||||||     
T  30002837 aaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctc-actgtttgtacag 30002739  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  30002738 tgacatcaaaagttcagt 30002721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 53337624 - 53337559
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 274  Q
    |||||||||||| ||||||||| || ||||| |||| |  | |||||||||||| |||||||||||    
T  53337624 ggaaaattctatggtaaagtcatgataatgatttttctgataaagttaacactaaaacataaaaaa 53337559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 17272007 - 17272075
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 273  Q
    |||||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| ||||    
T  17272007 ataaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 211 - 330
Target Start/End: Original strand, 15752027 - 15752145
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| |    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctc-actgtttgtacaatggc 15752125  T
Q  311 attaaaaattcagttctcat 330  Q
    || |||| |||||| |||||    
T  15752126 atcaaaagttcagtcctcat 15752145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 18422646 - 18422767
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  |||||||||||||| || |||||||||||||||||| |||||||||| |||||||||| | || |||||||||||    
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc-ccaccgtttgtacaat 18422744  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| |||||| |||||    
T  18422745 gacatcaaaagttcagtcctcat 18422767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 37619078 - 37618954
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac-cactactgtttgtaca 305  Q
    |||||||||||||| || |||| |  | |||||||||||| || |||||||||||||||||| |||||| |||||||||| || | | |||||||||| |    
T  37619078 aaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaa 37618979  T
Q  306 atgacattaaaaattcagttctcat 330  Q
    ||||||| |||| ||||||||||||    
T  37618978 atgacatcaaaagttcagttctcat 37618954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 32267028 - 32267142
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| ||| || ||||||  | |||||||||||| || ||||||||| |||||||| |||||| |||||||||||||| | |||||||||||||    
T  32267028 aaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacacc-ccactgtttgtacaa 32267126  T
Q  307 tgacattaaaaattca 322  Q
    |||||| |||| ||||    
T  32267127 tgacatcaaaagttca 32267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 37451306 - 37451396
Alignment:
Q  233 aaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||||||||||| || |||||||||||||||||| |||||| |||| ||||||||| |||| |||||||||||||||| |||| ||||||    
T  37451306 aaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacacc-ctaccgtttgtacaatgacatcaaaagttcagt 37451396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 8222124 - 8222210
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccac 292  Q
    ||||||||||||||  || ||||||  |||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  8222124 taaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccac 8222210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 10182189 - 10182068
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| ||||||||||||||| || ||||||| ||| |||||||||||||||| || |||||| | | |||||||||||| |    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaaca-cgccactgtttgtacagt 10182091  T
Q  308 gacattaaaaattcagttctcat 330  Q
    | ||| |||| |||||| |||||    
T  10182090 ggcatcaaaagttcagtcctcat 10182068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 28564938 - 28564841
Alignment:
Q  232 gaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcat 330  Q
    |||||||| ||||||  | |||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||||||| |||| |||||| |||||    
T  28564938 gaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacacc-ttactgtttgtacaatgacatcaaaagttcagtcctcat 28564841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 51128884 - 51128969
Alignment:
Q  238 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| | | || |||||||||||||||| |||| ||||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccaccgtttgtacaatgacatcaaaagttcagt 51128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 10922719 - 10922835
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    |||| ||||||| ||| || || ||| || ||||| |||||| || ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||    
T  10922719 ataacgaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagacc-ccactgtttgtac 10922817  T
Q  305 aatgacattaaaaattca 322  Q
    |||||||| |||| ||||    
T  10922818 aatgacatcaaaagttca 10922835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 1547281 - 1547403
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || |||||||||| | || ||||||||||||||||||||||||| |  ||||||||| | | ||||||||| ||     
T  1547281 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaaca-ctccactgtttgtgcag 1547379  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    || ||| |||| ||||||||||||    
T  1547380 tggcatcaaaagttcagttctcat 1547403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 15382927 - 15383043
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||| |  |||||||||||||| || || ||||||||||||||| |||||| |||||||||||| | | || ||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatc-ccaccgtttgtacaa 15383025  T
Q  307 tgacattaaaaattcagt 324  Q
    || ||| |||| ||||||    
T  15383026 tgtcatcaaaagttcagt 15383043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 42721035 - 42721147
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| |||||||| |||||| || |||||| | ||||| ||||||||||||| ||||||||||| | |||||||||||| |     
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacacc-ccactgtttgtacagta 42721133  T
Q  309 acattaaaaattca 322  Q
    |||| |||| ||||    
T  42721134 acatcaaaagttca 42721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 30327132 - 30327018
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || ||||||  |||||||||||||| || || ||||||||||||||| |||||| |||||||||| ||| | || |||||||||||     
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacc-caaccgtttgtacaata 30327034  T
Q  309 acattaaaaattcagt 324  Q
     ||| |||| ||||||    
T  30327033 gcatcaaaagttcagt 30327018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 2959743 - 2959864
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || | ||||||| | | |||||||||||| |    
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatc-ccactgtttgtacagt 2959841  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| |||||| |||||    
T  2959842 gacatcaaaagttcagtcctcat 2959864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 322
Target Start/End: Complemental strand, 19899950 - 19899837
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | ||||| |||||| || |||||||||||||||||| |||||| ||| |||||||||| | |||||||||| |||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctc-actgtttgtagaat 19899852  T
Q  308 gacattaaaaattca 322  Q
    | ||| |||| ||||    
T  19899851 ggcatcaaaagttca 19899837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 23999343 - 23999456
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||| ||| || ||||||  | ||||| |||||| || |||||||||||| |||||||||||||||| |||||||||| | ||| |||||| ||||    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacacc-ccactatttgtagaatg 23999441  T
Q  309 acattaaaaattcag 323  Q
    |||| |||| |||||    
T  23999442 acatcaaaagttcag 23999456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 329
Target Start/End: Original strand, 30254419 - 30254538
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||| |  | ||||||||||||  | ||||||||| |||||||| |||||| |||||||||| | ||| ||||||||||||||    
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cac-actgtttgtacaat 30254516  T
Q  308 gacattaaaaattcagttctca 329  Q
    ||||| |||| |||||| ||||    
T  30254517 gacatcaaaagttcagtcctca 30254538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Original strand, 28769651 - 28769730
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||| || ||||||  ||||| |||||||| || ||||||||||||| |||| |||||| ||||||||||||||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacacc 28769730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 238690 - 238579
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||||| |||||| |||||||| || ||||||||||||||  || |||||| |  |||||||||   | |||||||||||||||||    
T  238690 aaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaaca--tccactgtttgtacaatgac 238593  T
Q  311 attaaaaattcagt 324  Q
    || |||| ||||||    
T  238592 atcaaaagttcagt 238579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 30254853 - 30254952
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | ||||||||||||  | |||||||||||||||||| |||||| |||||  ||||||  | ||||||||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataacac--ccactgtttgtacaat 30254950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 3309144 - 3309225
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||| ||||||||| || |||||||||| | || |||||||||||||||||| |||| | |  |||||||||||    
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacacc 3309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 27564053 - 27563969
Alignment:
Q  241 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttc 326  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||||| | | |||||||||| | |||||| |||| ||||||||    
T  27564053 ttttttagtgaagttaacactataactttaaaaatatagtgagtaaca-ctccactgtttgtatagtgacatcaaaagttcagttc 27563969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 9903211 - 9903122
Alignment:
Q  232 gaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattca 322  Q
    |||||||||||||||  | |||||||||||||||||| |||| | || ||||||||||| |  ||||||||||| |||||| |||| ||||    
T  9903211 gaaaatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacacc-ccgctgtttgtacagtgacatcaaaagttca 9903122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 22170748 - 22170814
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 273  Q
    |||||||||||||| || || ||| ||||||||||||| || | |||||||||||||||||| ||||    
T  22170748 aaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 46931439 - 46931520
Alignment:
Q  241 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 323  Q
    |||||| || |||||||||||||||||| |||||| |||||||||| ||| | |||||||||| || | ||| ||||||||||    
T  46931439 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaatacc-ccactgtttgtagaacggcatcaaaaattcag 46931520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 7079254 - 7079173
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||| ||| ||||||||| || |||||||||||| || ||||||||||||||| || |||| | |  |||||||||||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacacc 7079173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 27763458 - 27763409
Alignment:
Q  241 ttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||| || |||||||||||||||||| |||||| ||||||||||||||    
T  27763458 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaacacc 27763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 32216093 - 32216149
Alignment:
Q  251 aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||||||||| |||||| || ||||||||| ||| |||||||||||||||    
T  32216093 aagttaacactataacatcaaaaatgtagtgagtaaca-caccactgtttgtacaatg 32216149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 48620631 - 48620747
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    ||||||||||||||  | |||| |  |||||||||||| | || ||||||||| |||||||| |||| | |  ||||||||||| | ||||||||||||     
T  48620631 aaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacag 48620729  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  48620730 tgacatcaaaagttcagt 48620747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 16415639 - 16415755
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||  || |||||| || |||||||||| | || |||||||||||||| ||| |||| | || |||||||||||   | ||||||||||     
T  16415639 aaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacag 16415738  T
Q  307 tgacattaaaaattcag 323  Q
    || ||| |||| |||||    
T  16415739 tggcatcaaaagttcag 16415755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 38823210 - 38823274
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 273  Q
    |||||||||||| || |||||| || |||||||||| | ||||||||||||||||| ||| ||||    
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaa 38823274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 34012559 - 34012477
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac 289  Q
    |||||||||||||| || |||||| ||||||||| ||| |  | |||||||||||||||||| || | | || ||||||||||    
T  34012559 aaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacac 34012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 3534926 - 3535042
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    ||||||||||||||  | ||||||  | ||| | |||| |||| |||||||||||||||||| |||| | |  |||||||||||  |||||||||| ||     
T  3534926 aaggaaaattctattatgaagtcattagaattaattttctagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ttactgtttgtgcag 3535024  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  3535025 tgacatcaaaagttcagt 3535042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 11742532 - 11742416
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| |||||| |||| | || |||||||||| | || ||||||||||||||  || |||| | |  | ||||||||| | ||||||||||||     
T  11742532 aaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacacc-ccactgtttgtacag 11742434  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  11742433 tgacatcaaaagttcagt 11742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 324
Target Start/End: Complemental strand, 27267361 - 27267265
Alignment:
Q  225 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||| || ||||| |||||| || ||||||||||||   |||||||||| || ||||| ||||| | |||||||||||| || |||||||| ||||||    
T  27267361 aagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacacccc-actgtttgtacagtggcattaaaagttcagt 27267265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 3655388 - 3655267
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||| ||| || ||||||  ||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||| | || |||||||||||    
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtacaat 3655290  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| |||||| |||||    
T  3655289 gacatcaaaagttcagtcctcat 3655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 40552445 - 40552324
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| || |||||||||||| |  |||||||||||||||||| |||||| |||||||||||| | | || |||||||||||    
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaaca-ctccaccgtttgtacaat 40552347  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| |||||| |||||    
T  40552346 gacatcaaaagttcagtcctcat 40552324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 46297945 - 46297849
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||| || |||||| ||||||||||||| | || |||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||    
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaaca-caccactgtttgtacaatg 46297849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 51213166 - 51213046
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| || |||||||||||| || ||||||||||| ||||||||||||| ||||||| |||||| | |||||||||||||||    
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacacc-ccactgtttgtacaatg 51213068  T
Q  309 acattaaaaattcagttctcat 330  Q
     ||| |||| || ||| |||||    
T  51213067 gcatcaaaagttgagtcctcat 51213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 48354930 - 48355052
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || ||||| |||| | || ||||||||||||||| || |||||| |||||||||||||| | | |||||||||||    
T  48354930 aaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacacc-ccattgtttgtacaa 48355028  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    || ||| |||| ||||||||||||    
T  48355029 tggcatcaaaagttcagttctcat 48355052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 26941446 - 26941325
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | ||||| |||||| || ||||||||||||||| || |||| |||||||||||||||| | |||||||||| |||    
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacacc-ccactgtttgtataat 26941348  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| |||||| |||||    
T  26941347 gacatcaaaagttcagtcctcat 26941325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 20373481 - 20373361
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||| ||| || ||||||  | ||||| |||||| || ||||||| |||||||||| |||||| ||| |||||||||| | |||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacacccc-actgtttgtacaatg 20373383  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| ||||||||||||    
T  20373382 acatcaaaagttcagttctcat 20373361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 34132924 - 34133040
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    ||||||||||||||  | |||||| ||||||||||||||| || || |||||||||||  || |||||| |  ||||||||||| | |||||||||||||    
T  34132924 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacacc-ccactgtttgtacaa 34133022  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  34133023 tgacatcaaaagttcagt 34133040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 35844315 - 35844424
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||||||  |||||| |  ||||||||||| | ||||||||||||     
T  35844315 aaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctc-actgtttgtacag 35844413  T
Q  307 tgacattaaaa 317  Q
    |||||| ||||    
T  35844414 tgacatcaaaa 35844424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 37203058 - 37203178
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || ||||||  ||||||| ||||||  | |||||||||||||||||| |||| | || ||||||||||| | |||||||||||| ||    
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacc-ccactgtttgtacagtg 37203156  T
Q  309 acattaaaaattcagttctcat 330  Q
     ||| |||| |||||| |||||    
T  37203157 gcatcaaaagttcagtcctcat 37203178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 47481546 - 47481620
Alignment:
Q  242 tttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaa 317  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||| | |||||||||| |||||||| ||||    
T  47481546 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtagaatgacatcaaaa 47481620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 4761838 - 4761714
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgactttttta--gttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    |||||||||||||| || || ||| || | ||||||||||   || ||||||| ||||||| || |||||| |||||||||||||  | |||||||||||    
T  4761838 aaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttc-actgtttgtac 4761740  T
Q  305 aatgacattaaaaattcagttctcat 330  Q
    |||||||| |||| |||||| |||||    
T  4761739 aatgacatcaaaagttcagtcctcat 4761714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 29099372 - 29099448
Alignment:
Q  235 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacat 312  Q
    |||||||||| | || ||||||||||||||||||||||||| |  ||||||||||| | |||||||||||| ||||||    
T  29099372 aatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacacc-ccactgtttgtacagtgacat 29099448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 37157699 - 37157780
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||| || |||||| ||||||| |||||||  | |||||||||||||||||| |||| | || |||||||||||    
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacc 37157780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 11357534 - 11357454
Alignment:
Q  225 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||| || |||||||||| | || |||||||||||||| ||| |||| |||| ||||||||||| | ||||||||||||    
T  11357534 aagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtaca 11357454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 323
Target Start/End: Original strand, 54505825 - 54505912
Alignment:
Q  235 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 323  Q
    ||||||||||||  | |||||||||||||||||| |||||| |||||||||||||| | | | ||| || |||||||| ||||||||||    
T  54505825 aatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccattatttatagaatgacatcaaaaattcag 54505912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 42506214 - 42506140
Alignment:
Q  255 taacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcat 330  Q
    |||||||||||||| |||| | |||||||||| ||| | ||||||||||||||||||| |||| |||||| |||||    
T  42506214 taacactataacatcaaaattgtaatgagtaatacccc-actgtttgtacaatgacatcaaaagttcagtcctcat 42506140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 41585449 - 41585411
Alignment:
Q  252 agttaacactataacataaaaaatataatgagtaacacc 290  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacacc 41585411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 55343471 - 55343401
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatat 277  Q
    |||||||||||||| || |||||| ||||||||||||| |  | ||||||||||||||| || ||||||||    
T  55343471 aaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaatat 55343401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 4015451 - 4015571
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| || |||||||||| |  | |||||||||||||| ||| |||| | |  ||||||||||| | |||||||||| | ||    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacc-caactgtttgtagagtg 4015549  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| |||||| |||||    
T  4015550 acatcaaaagttcagtcctcat 4015571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 21193593 - 21193649
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacact 261  Q
    |||||||||||||||| ||||||||| || |||||||||| | || |||||||||||    
T  21193593 ataaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacact 21193649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 54828888 - 54828805
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||| |||||| ||| || ||||||  ||||| | |||||| || ||||||||||||||||||| ||||| ||||||||||||||    
T  54828888 taagaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacata-aaaatgtaatgagtaacacc 54828805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 22446247 - 22446168
Alignment:
Q  212 aaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacacc 290  Q
    ||||||||  || |||||| ||||||||||||||| | | ||||||||| |||| ||| ||||||||| |||||||||||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacacc 22446168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 7327669 - 7327603
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagtt-aacactataacataaaaa 273  Q
    ||||||||||||| || |||| | || ||||||||||||||| ||||| ||||||||||||| ||||    
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaa 7327603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 21009939 - 21009874
Alignment:
Q  257 acactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 323  Q
    |||||||||||| |||||| |||||||||||||| | ||| |||||| |||||||| |||| |||||    
T  21009939 acactataacatcaaaaatgtaatgagtaacacc-ccactatttgtagaatgacatcaaaagttcag 21009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 39282640 - 39282763
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    |||||||||||||||| || |||||| |||||||| |||| |  | || ||||||||||||||| |||| | |  ||||||| ||| | ||||||| |||    
T  39282640 ataaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaatacc-ccactgtttatac 39282737  T
Q  305 aatgacattaaaaattcagttctcat 330  Q
    | || ||| |||| ||||||||||||    
T  39282738 agtggcatcaaaagttcagttctcat 39282763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 27480564 - 27480488
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagta 285  Q
    ||||||||||||  | |||||| || |||||  ||||| || |||| ||||||||||||| |||| |||||||||||    
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagta 27480488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 49359676 - 49359628
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaa 257  Q
    |||||||||||| || |||||| ||||||||||||||| || |||||||    
T  49359676 ggaaaattctatggtgaagtcatgaaaatgactttttttgtgaagttaa 49359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 5112490 - 5112374
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| ||| || |||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||     
T  5112490 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacacc-ccactgtttgtacag 5112392  T
Q  307 tgacattaaaaattcagt 324  Q
    || ||| |||| ||||||    
T  5112391 tggcatcaaaagttcagt 5112374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 36860417 - 36860537
Alignment:
Q  203 acataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgt 302  Q
    |||||||||||||||||| || |||||| |||||||| |||| | || ||||||||||||||  ||||||||| |  ||||||||||| | |||||||||    
T  36860417 acataaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacacc-ccactgtttgt 36860515  T
Q  303 acaatgacattaaaaattcagt 324  Q
    |||||||||| |||| ||||||    
T  36860516 acaatgacatcaaaagttcagt 36860537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 1429321 - 1429206
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||| ||||| || |||||| |||||||||| |||| || |||||||||||||| ||| ||||||||| ||||||||||| | |||||||||||| |    
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacacc-ccactgtttgtacact 1429223  T
Q  308 gacattaaaaattcagt 324  Q
    | ||| |||||||||||    
T  1429222 ggcatcaaaaattcagt 1429206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 210 - 317
Target Start/End: Complemental strand, 31705785 - 31705679
Alignment:
Q  210 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 309  Q
    ||||||||||| || ||||||  ||||||| |||||| || |||||||||||||||||| |||||| ||| |||||||||| |||| |||||||||||||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacc-ctaccgtttgtacaatga 31705687  T
Q  310 cattaaaa 317  Q
    ||| ||||    
T  31705686 catcaaaa 31705679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 12910348 - 12910445
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||||||| || |||||| ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||| | ||||||||||||    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacacc-ccactgtttgtaca 12910445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 39572818 - 39572939
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| || |||||||||| |||||||||||| ||||||| ||||||||| |  ||||||||| | | ||||||||| || |    
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaaca-ctccactgtttgtgcagt 39572916  T
Q  308 gacattaaaaattcagttctcat 330  Q
    ||||| |||| ||||||||||||    
T  39572917 gacatcaaaagttcagttctcat 39572939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 26317859 - 26317778
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    ||||||||||||  | |||||| ||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc 26317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 22974259 - 22974137
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||| | || ||||| |||||| || |||||||||||||||||| |||||  |||||||||||| | | |||||||||||||    
T  22974259 aaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatc-ccactgtttgtacaa 22974161  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    | |||| |||| |||| |||||||    
T  22974160 taacatcaaaagttcaattctcat 22974137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 35826660 - 35826538
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || |||||||||||| || ||||||| |||||||||| |||||| || ||||||||||  | | ||||||||||     
T  35826660 aaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttc-attgtttgtacag 35826562  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    |||||| |||| |||||| |||||    
T  35826561 tgacatcaaaagttcagtcctcat 35826538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 36866762 - 36866876
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| |||||||| |||| | || ||||||||||||||| || ||||||||  ||||||||||| | |||||||||||||||    
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacacc-ccactgtttgtacaatg 36866860  T
Q  309 acattaaaaattcagt 324  Q
     ||| |||| ||||||    
T  36866861 gcatcaaaagttcagt 36866876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 24886100 - 24886224
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgactttttta--gttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    |||||||||| ||| || || ||| || ||||||||||||   || ||||||| |||||||||| |||||| |||||||||||||| | |||||||||||    
T  24886100 aaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtac 24886198  T
Q  305 aatgacattaaaaattcagttctcat 330  Q
    |||||||| |||| |||||| |||||    
T  24886199 aatgacatcaaaagttcagtcctcat 24886224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 22255179 - 22255302
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacat-aaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||| ||||  || ||||||  ||||| |||||||| || ||||||||| |||||||| ||||||| |||||||||||||| | || |||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacacccc-accgtttgtaca 22255277  T
Q  306 atgacattaaaaattcagttctcat 330  Q
    ||| ||| |||| ||||||||||||    
T  22255278 atggcatcaaaagttcagttctcat 22255302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 27318646 - 27318543
Alignment:
Q  225 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||| || ||||| |||| | || |||||||||||| |||||||||||| || ||||||||| ||| ||||||||||||||||||| |||| || |||    
T  27318646 aagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaaca-caccactgtttgtacaatgacatcaaaagtttagt 27318548  T
Q  325 tctca 329  Q
    |||||    
T  27318547 tctca 27318543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 17158209 - 17158098
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagtt---aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    ||||||||||||| || ||||||  ||||||| ||||||  ||   ||||||||||||||||||||||||| |||||||||||| | | || ||||||||    
T  17158209 aggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccaccgtttgtac 17158111  T
Q  305 aatgacattaaaa 317  Q
    |||||||| ||||    
T  17158110 aatgacatcaaaa 17158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 8742064 - 8741947
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||| ||| |||| | |  ||||||||||| | | |||||||||||    
T  8742064 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaa 8741965  T
Q  307 tgacattaaaaattcagt 324  Q
    || ||| |||| ||||||    
T  8741964 tggcatcaaaagttcagt 8741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 13956523 - 13956425
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||  || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||||| | ||||||||||||    
T  13956523 taaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctc-actgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 15724490 - 15724592
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||| | || |||||||||||| || |||||||||||||||||| |||| | |  ||||||||||| | ||||||| |||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacacc-ccactgtttatacaatg 15724588  T
Q  309 acat 312  Q
    ||||    
T  15724589 acat 15724592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 699192 - 699264
Alignment:
Q  251 aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||||||||||| |||||||||| || ||||||||||| | |||||||||||| |||||| |||| ||||||    
T  699192 aagttaacactatagcataaaaaatctagtgagtaacacc-ccactgtttgtacagtgacatcaaaagttcagt 699264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 38528413 - 38528297
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| |||||||  |||| |  | |||||||||||||||||| |||| | |||||||||||||| | | ||||| ||||     
T  38528413 aaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacacc-ccattgtttatacag 38528315  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  38528314 tgacatcaaaagttcagt 38528297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 330
Target Start/End: Original strand, 5829921 - 5830021
Alignment:
Q  233 aaaatgacttttttagttaagttaacactataa----cataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctc 328  Q
    ||||||| |||||| || ||||||||| |||||    |||||||||| |||||||||||||| |||| |||||||||||||||| |||| || ||| |||    
T  5829921 aaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacacc-ctaccgtttgtacaatgacatcaaaagtttagtcctc 5830019  T
Q  329 at 330  Q
    ||    
T  5830020 at 5830021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 14919706 - 14919583
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||| ||| || |||||| || ||| | |||||| | | ||||||||| |||||||| |||||| |||||||||||||| | ||||||| || |    
T  14919706 aaggaaaattatatggtgaagtcatgagaattattttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctc-actgtttatata 14919608  T
Q  306 atgacattaaaaattcagttctcat 330  Q
    ||||||| |||| |||||| |||||    
T  14919607 atgacatcaaaagttcagtcctcat 14919583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 324
Target Start/End: Original strand, 27330303 - 27330418
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| |||| | |  |||||||||||  |||||||||||||    
T  27330303 taaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacc-ttactgtttgtaca 27330399  T
Q  306 atgacattaaaaattcagt 324  Q
    ||| ||| |||| ||||||    
T  27330400 atggcatcaaaagttcagt 27330418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 40133385 - 40133499
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||||| ||||  || |||||| |  ||||||||||| | ||| |||||||||||    
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacacc-ccactatttgtacaatg 40133483  T
Q  309 acattaaaaattcagt 324  Q
     ||| |||| ||||||    
T  40133484 gcatcaaaagttcagt 40133499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 7209037 - 7208924
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 309  Q
    |||||||||  || ||||||  |||||||||||||| | | ||||||||| | |||||||||||||  || |||||||||| |||| ||||||||| |||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacacc-ctaccgtttgtacattga 7208939  T
Q  310 cattaaaaattcagt 324  Q
    ||| |||| ||||||    
T  7208938 catcaaaagttcagt 7208924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 7693230 - 7693342
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || ||||||  |||||||||||| | || |||||||||||||||||| |||| | |  ||||||||| | | |||||||||||| ||    
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatc-ccactgtttgtacagtg 7693328  T
Q  309 acattaaaaattca 322  Q
     ||| |||| ||||    
T  7693329 gcatcaaaagttca 7693342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 19119857 - 19119973
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||| ||| |||| | |    ||||||||| | ||||||||||||     
T  19119857 aaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacacc-ccactgtttgtacag 19119955  T
Q  307 tgacattaaaaattcagt 324  Q
    |||||| |||| ||||||    
T  19119956 tgacatcaaaagttcagt 19119973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 23116397 - 23116302
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||||||||||| || | |||| |||||||||||||||  | ||||||||| |||||||| |||| | || |||||| |||| | ||||||||||||    
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcacc-ccactgtttgtaca 23116302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 16004552 - 16004485
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaat-gacttttttagttaagttaacactataacataaaaaat 275  Q
    |||||||||||| ||||||||| || ||| ||||||| | || |||||||||||||||||| ||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaat 16004485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 22255617 - 22255656
Alignment:
Q  251 aagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  22255617 aagttaacactataacatcaaaaatgtaatgagtaacacc 22255656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 5748478 - 5748516
Alignment:
Q  252 agttaacactataacataaaaaatataatgagtaacacc 290  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  5748478 agttaacactataacgtcaaaaatataatgagtaacacc 5748516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 9200232 - 9200340
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||| ||| || ||||||  ||||| |||||| | || |||||||||||||||||| |||| | |  ||||||||||| | || ||||||||| |    
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccacagtttgtacagt 9200330  T
Q  308 gacattaaaa 317  Q
    ||||| ||||    
T  9200331 gacatcaaaa 9200340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 14409501 - 14409420
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||| || |||||| || ||||| |||| | || |||| ||||||||||||| |||||| || |||||| ||||    
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcacc 14409420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 30969502 - 30969379
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||   | |||||| || ||||| || | | || |||||||||||||||||| |||| | |  ||||||||||| | ||| ||| ||||    
T  30969502 taaggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactatttataca 30969404  T
Q  306 atgacattaaaaattcagttctcat 330  Q
    ||||||| |||| |||||| |||||    
T  30969403 atgacatcaaaagttcagtcctcat 30969379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 5627389 - 5627504
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||  || ||||||  | |||||||||||| || |||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacacc-ccactatttgtagaa 5627487  T
Q  307 tgacattaaaaattcag 323  Q
    |||||| |||| |||||    
T  5627488 tgacatcaaaagttcag 5627504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 4319009 - 4318895
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||| || |||||||||||| || |||||||||||||||||| |||| | | |||||||||||| | ||||||||||||     
T  4319009 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacacc-ccactgtttgtacag 4318911  T
Q  307 tgacattaaaaattca 322  Q
    |||||| |||| ||||    
T  4318910 tgacatcaaaagttca 4318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 1945829 - 1945947
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgta 303  Q
    |||||||||||||||  || ||||||  | |||||||||||| | | |||||||||||||||||| |||||| |||||||||||||| | ||||||||||    
T  1945829 ataaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgta 1945927  T
Q  304 caatgacattaaaaattcag 323  Q
     |||||||| |||| |||||    
T  1945928 gaatgacatcaaaagttcag 1945947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 7055400 - 7055286
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||| ||| || ||||||  | ||||| |||||| || |||||||||||||||||||||||||||||| ||||||||| | ||| |||||| |||    
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctc-actatttgtagaat 7055302  T
Q  308 gacattaaaaattcag 323  Q
    ||||| |||| |||||    
T  7055301 gacatcaaaagttcag 7055286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 33893186 - 33893072
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| |||||||||  | ||| | ||||||||| |||||||||||||||||| |||| | |  ||||||||||| | ||| |||||||||||    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactatttgtacaatg 33893088  T
Q  309 acattaaaaattcagt 324  Q
    | ||||||| ||||||    
T  33893087 atattaaaagttcagt 33893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 8513232 - 8513347
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| || |||||||||| | || ||||||||||||||| || |||| | |  ||||||||||| | |||||||||||| |    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacacc-ccactgtttgtacagt 8513330  T
Q  308 gacattaaaaattcagt 324  Q
    ||||| |||| ||||||    
T  8513331 gacatcaaaagttcagt 8513347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 322
Target Start/End: Complemental strand, 3880124 - 3880011
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| || |||||||||| | || ||||||||| ||||  || |||| | |  ||||||||||| ||||||||||||||||    
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacacc-ctactgtttgtacaat 3880026  T
Q  308 gacattaaaaattca 322  Q
    ||||| |||| ||||    
T  3880025 gacatcaaaagttca 3880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 6091363 - 6091253
Alignment:
Q  212 aaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgaca 311  Q
    ||||||||| || |||||| |||||| | |||||| || ||||||||| | ||||||||||||| || ||||||||| ||| | ||||||||||||| ||    
T  6091363 aaattctattgtgaagtcatgaaaataatttttttggtaaagttaaca-tgtaacataaaaaatgtagtgagtaaca-caccattgtttgtacaatgcca 6091266  T
Q  312 ttaaaaattcagt 324  Q
    | |||| ||||||    
T  6091265 tcaaaagttcagt 6091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 24662238 - 24662189
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaac 258  Q
    |||||||||||| ||||||||| || |||||||||| |||| ||||||||    
T  24662238 ggaaaattctatggtaaagtcatgataatgacttttctagtgaagttaac 24662189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 33551189 - 33551082
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||  || |||||| || ||||||||||||||| |||||||||||||||||| |||||| || ||||||||||| | |||||||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacacc-ccactgtttgtacaatg 33551091  T
Q  309 acattaaaa 317  Q
    |||| ||||    
T  33551090 acatcaaaa 33551082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 35958909 - 35959022
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    ||||||||||||  | ||||||  |||||||||||||| || |||||  |||||||||||||||||| ||||||| |||||| | |||||||||||||||    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacacc-ccactgtttgtacaatg 35959007  T
Q  309 acattaaaaattcag 323  Q
    ||||||||| |||||    
T  35959008 acattaaaagttcag 35959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 329
Target Start/End: Complemental strand, 19289523 - 19289407
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||||     ||||||||||||  | |||||||||||||||||| ||||||||||||||||||||| | | |||||||||||    
T  19289523 aaggaaaattctatggtgaagtc-----aatgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacacc-ccattgtttgtacaa 19289430  T
Q  307 tgacattaaaaattcagttctca 329  Q
    |||||| |||| || ||||||||    
T  19289429 tgacatcaaaagttaagttctca 19289407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 37905709 - 37905828
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||| |  ||||||| |||||| || ||||||||||||||||||||||||| ||| |||||||||| | || ||||||||||||    
T  37905709 ggaaaattctatggtgaagttataaaaatga-ttttttggtgaagttaacactataacataaaaaatgtaacgagtaacacc-ccaccgtttgtacaatg 37905806  T
Q  309 acattaaaaattcagttctcat 330  Q
    |||| |||| |||||| |||||    
T  37905807 acatcaaaagttcagtcctcat 37905828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 4166918 - 4167036
Alignment:
Q  205 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 304  Q
    |||||||||||||||| || |||||| ||||||||||||| | || ||||||||| ||||  || ||||||||  ||||||||||| | |||||||||||    
T  4166918 ataaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacacc-ccactgtttgtac 4167016  T
Q  305 aatgacattaaaaattcagt 324  Q
    |||| ||| |||| ||||||    
T  4167017 aatggcatcaaaagttcagt 4167036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 29242344 - 29242246
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    ||||||||||||||| || |||||| |||||||  |||||| || ||||||| |||||||||||||||||||| || |||||||| | ||||||||||||    
T  29242344 taaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacacc-ccactgtttgtaca 29242246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 33660569 - 33660457
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || ||||||  |||||||||||| ||||||||||||||||||||||| |||| | |  ||||||||||| | |||||||||||| || |    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacc-caactgtttgtacagtggc 33660471  T
Q  311 attaaaaattcagt 324  Q
    || |||| ||||||    
T  33660470 atcaaaagttcagt 33660457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 26357577 - 26357694
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||| ||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||| | | |||||||||||| ||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatc-ccactgtttgtacagtg 26357675  T
Q  309 acattaaaaattcagttct 327  Q
    |||| |||| |||||||||    
T  26357676 acatcaaaagttcagttct 26357694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 43648415 - 43648334
Alignment:
Q  242 tttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||| | |||||||||| |||||||| |||| ||||||    
T  43648415 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacctc-actgtttgtataatgacatcaaaagttcagt 43648334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 11366585 - 11366471
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || || |||  | |||||||||||| || || ||||||||||||||| |||||| |||||||||||| | | ||| |||||| |||    
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctc-actatttgtataat 11366487  T
Q  308 gacattaaaaattcag 323  Q
    ||||| |||| |||||    
T  11366486 gacatcaaaagttcag 11366471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 17054300 - 17054192
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| |  |||||||||||| || ||||||| |||||||||| |||||| || | ||||||| | | | ||||||||||||    
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctc-attgtttgtacaat 17054202  T
Q  308 gacattaaaa 317  Q
    ||||| ||||    
T  17054201 gacatcaaaa 17054192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 330
Target Start/End: Original strand, 3176941 - 3177059
Alignment:
Q  211 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 310  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||| ||||||| || |||||| |  ||||||||||  | |||||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacg-caactgtttgtacaatgac 3177039  T
Q  311 attaaaaattcagttctcat 330  Q
    || |||| |||||| |||||    
T  3177040 atcaaaagttcagtcctcat 3177059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 27350109 - 27350027
Alignment:
Q  241 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 324  Q
    |||||| || |||||||||||||| ||| |||||| |  ||||||||||||| |||||||||||| |||||| |||| ||||||    
T  27350109 ttttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccac-actgtttgtacagtgacatcaaaagttcagt 27350027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 17071941 - 17071833
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| |  |||||||||||| || |||||||||||||||||  |||||| || | ||||||| | | | | ||||||||||    
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctc-attatttgtacaat 17071843  T
Q  308 gacattaaaa 317  Q
    ||||| ||||    
T  17071842 gacatcaaaa 17071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 4264281 - 4264166
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || ||||||  | |||||||||| | || |||||||||||||| ||| |||| | |  ||||||||| | | |||||||||||| |    
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatc-ccactgtttgtacagt 4264183  T
Q  308 gacattaaaaattcagt 324  Q
    ||||| |||| ||||||    
T  4264182 gacatcaaaagttcagt 4264166  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 2325575 - 2325453
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||||||| || |||| | |  |||||||||| | || ||||||||| |||||||| | |||| || ||||||||||| | | ||||||||||     
T  2325575 aaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacacc-ccattgtttgtacac 2325477  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    || ||| |||| |||||| |||||    
T  2325476 tggcatcaaaagttcagtcctcat 2325453  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 18494473 - 18494390
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 290  Q
    |||||||||||| | || |||||| ||||||||||||| | || |||||||||||||| ||| |||| | |  |||||||||||    
T  18494473 aaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacc 18494390  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 33902094 - 33902185
Alignment:
Q  235 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctca 329  Q
    |||||||||| | || ||||||||||  ||||||||||||| || ||||||| ||| | |||||||||| |||||||| |||| |||||| ||||    
T  33902094 aatgacttttctggtgaagttaacac--taacataaaaaatgtagtgagtaatacc-ccactgtttgtaaaatgacatcaaaagttcagtcctca 33902185  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 34441972 - 34441921
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaa 257  Q
    ||||||||||||||| || |||||| ||||||||||||||| || |||||||    
T  34441972 taaggaaaattctatggtgaagtcatgaaaatgacttttttggtaaagttaa 34441921  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 39167568 - 39167446
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 306  Q
    |||||||||| ||| || |||||| || ||||| ||||||  | |||||||||  |||  || |||| |||  ||||||||||| | |||||||||||||    
T  39167568 aaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctc-actgtttgtacaa 39167470  T
Q  307 tgacattaaaaattcagttctcat 330  Q
    |||||| |||| |||||| |||||    
T  39167469 tgacatcaaaagttcagtcctcat 39167446  T

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Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 41960880 - 41960947
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 273  Q
    ||||||||||||||| || ||||||   |||||||||||||  | |||||||||||||||||| ||||    
T  41960880 taaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 44913662 - 44913774
Alignment:
Q  209 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 308  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||||||| ||  || |||||| |  ||||||||||| |   |||||||| ||||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttat-gtgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  309 acattaaaaattca 322  Q
    |||| |||| ||||    
T  44913761 acataaaaagttca 44913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 36641983 - 36642106
Alignment:
Q  206 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 305  Q
    |||| |||||||||| || |||||| || |||||||||| | || || |||| |||||| ||| |||| | |   |||||||||| | ||||||||||||    
T  36641983 taagaaaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctc-actgtttgtaca 36642081  T
Q  306 atgacattaaaaattcagttctcat 330  Q
     |||||| |||| |||||| |||||    
T  36642082 gtgacatcaaaagttcagtcctcat 36642106  T

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Target: scaffold0291 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 7913 - 8007
Alignment:
Q  235 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcat 330  Q
    ||||||||||||  | |||||||||||||||||| |||| | |||||||||||||| | ||||||||||||||||||| |||| |||||| |||||    
T  7913 aatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacacc-ccactgtttgtacaatgacatcaaaagttcagtcctcat 8007  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 133 - 254
Alignment:
Q  208 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 307  Q
    ||||||||||||| || |||||| ||||||||||||| | || ||||||||||| ||  ||||||||| |  ||||||||| | | ||||||||||||||    
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaaca-ctccactgtttgtacaat 231  T
Q  308 gacattaaaaattcagttctcat 330  Q
    | ||| |||| |||||| |||||    
T  232 ggcatcaaaagttcagtcctcat 254  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 146175 - 146088
Alignment:
Q  235 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 323  Q
    ||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||| | | | |||||| |||||||| |||| |||||    
T  146175 aatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacacc-ccattatttgtagaatgacatcaaaagttcag 146088  T

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Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 330
Target Start/End: Original strand, 43986 - 44077
Alignment:
Q  238 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcat 330  Q
    ||||||||| || |||||||| |||||| || |||||| |||||||||||||| |   ||||||||||||| ||| |||| |||||| |||||    
T  43986 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacacc-ccgttgtttgtacaatggcataaaaagttcagtcctcat 44077  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 154801 - 154710
Alignment:
Q  238 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcat 330  Q
    ||||||||| || |||||||| |||||| || |||||| |||||||||||||| |   ||||||||||||| ||| |||| |||||| |||||    
T  154801 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacacc-ccgttgtttgtacaatggcataaaaagttcagtcctcat 154710  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 100819 - 100886
Alignment:
Q  207 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 274  Q
    |||||||||||||| || |||||| || ||||| |||||| || |||||||| ||||||||| |||||    
T  100819 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaaa 100886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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