View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4540_high_7 (Length: 273)
Name: NF4540_high_7
Description: NF4540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4540_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 34898959 - 34899198
Alignment:
| Q |
12 |
aagacagaccttccttaaagggggtcgaaaattgttgatccactttccatgacctaatcttgccatccttatggccagtccagaccatcttattcccgtt |
111 |
Q |
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| T |
34898959 |
aagaaagaccttccttaaagggggtcgaaaattgttgatccactttccatgacctaatcttgccatccttatggccagtccagaccatcttattcccgtt |
34899058 |
T |
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| Q |
112 |
gtcgacggtcaaacaaaatgtaggagaggtatcagcagattcataaaaaggcgcagcgtcctcatctcccctcctaacccttcctcccagaccgcaaccg |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34899059 |
gtcgacggtcaaacaaaatgtaggagaggtatcagcagattcataaaaaggtgcagcgtcctcatctcccctcctaacccttcctcccagaccgcaaccg |
34899158 |
T |
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| Q |
212 |
tgttcataggccttttgaaactcccacaccctcaccccac |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
34899159 |
tgttcataggccttttgaaactcccacaccctcaccccac |
34899198 |
T |
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