View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4541_low_25 (Length: 218)
Name: NF4541_low_25
Description: NF4541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4541_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 29650037 - 29650216
Alignment:
| Q |
21 |
tcattgagaaagacatggttcctatgggaatgtagacacaaaataacacaaagagtgttaagaaactaaatgaagaagccattttcattatatgatcaat |
120 |
Q |
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| T |
29650037 |
tcattgagaaagacatggttcctatgggaatgtagacacaaaataacacaaagagtgttaagaaactaaatgaagaagccatttttattatatgatcaat |
29650136 |
T |
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| Q |
121 |
gtgcttttgtgttatgtttgttaggattgtgaagcaaactagctcttttatacacacacacatggctagggtttcatact |
200 |
Q |
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| T |
29650137 |
gtgcttttgtgttatgtttgttaggattgtgaagcaaactagctcttttatacacacacacatggctagggtttcatact |
29650216 |
T |
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