View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4542_high_13 (Length: 226)

Name: NF4542_high_13
Description: NF4542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4542_high_13
NF4542_high_13
[»] chr6 (25 HSPs)
chr6 (1-215)||(32518307-32518520)
chr6 (1-215)||(18644914-18645127)
chr6 (1-215)||(3480468-3480680)
chr6 (1-216)||(32454314-32454527)
chr6 (18-215)||(32437210-32437406)
chr6 (1-209)||(9399851-9400058)
chr6 (1-201)||(11357020-11357217)
chr6 (13-196)||(20525163-20525345)
chr6 (1-196)||(6902727-6902921)
chr6 (1-214)||(21068691-21068903)
chr6 (1-214)||(10569730-10569942)
chr6 (1-196)||(13610756-13610940)
chr6 (1-161)||(33267127-33267287)
chr6 (1-196)||(21091160-21091354)
chr6 (39-196)||(7051074-7051230)
chr6 (1-214)||(21045376-21045588)
chr6 (13-151)||(7371253-7371391)
chr6 (19-132)||(14337750-14337862)
chr6 (133-196)||(18644899-18644961)
chr6 (133-196)||(32518292-32518354)
chr6 (169-215)||(11357040-11357086)
chr6 (133-196)||(32437359-32437421)
chr6 (168-214)||(7051090-7051136)
chr6 (182-215)||(13610892-13610925)
chr6 (133-196)||(3480453-3480514)
[»] chr1 (45 HSPs)
chr1 (1-215)||(37345772-37345985)
chr1 (1-215)||(25276808-25277021)
chr1 (1-215)||(27089089-27089302)
chr1 (1-215)||(8169378-8169591)
chr1 (1-215)||(26223653-26223866)
chr1 (1-215)||(8168008-8168220)
chr1 (1-215)||(1443992-1444204)
chr1 (1-215)||(9120105-9120317)
chr1 (1-215)||(47011522-47011734)
chr1 (1-196)||(34776635-34776829)
chr1 (1-196)||(46582076-46582270)
chr1 (4-196)||(4854479-4854670)
chr1 (1-196)||(33599284-33599478)
chr1 (8-201)||(45044993-45045185)
chr1 (1-201)||(3011921-3012120)
chr1 (18-196)||(2870905-2871082)
chr1 (10-201)||(51894642-51894832)
chr1 (10-196)||(50554238-50554423)
chr1 (1-201)||(31236885-31237084)
chr1 (20-214)||(52641973-52642166)
chr1 (1-215)||(23577702-23577920)
chr1 (101-215)||(20944900-20945013)
chr1 (5-151)||(6816906-6817053)
chr1 (20-186)||(37087975-37088140)
chr1 (133-215)||(25276974-25277055)
chr1 (168-215)||(4854608-4854655)
chr1 (168-215)||(33599416-33599463)
chr1 (168-215)||(34776767-34776814)
chr1 (133-196)||(37345757-37345819)
chr1 (168-215)||(50554361-50554408)
chr1 (134-196)||(27089074-27089135)
chr1 (133-196)||(8168173-8168235)
chr1 (133-196)||(8169363-8169425)
chr1 (133-196)||(25277008-25277070)
chr1 (18-132)||(3369513-3369627)
chr1 (133-197)||(20944884-20944947)
chr1 (168-215)||(2870920-2870967)
chr1 (133-196)||(26223819-26223881)
chr1 (168-215)||(45045118-45045165)
chr1 (168-215)||(46582208-46582255)
chr1 (169-215)||(3012054-3012100)
chr1 (147-196)||(23577887-23577935)
chr1 (1-54)||(47013087-47013140)
chr1 (133-196)||(1443977-1444038)
chr1 (133-196)||(9120271-9120332)
[»] chr8 (48 HSPs)
chr8 (1-214)||(27692648-27692860)
chr8 (1-215)||(29238997-29239210)
chr8 (1-215)||(33761135-33761348)
chr8 (1-215)||(35510629-35510842)
chr8 (1-196)||(13283824-13284018)
chr8 (1-215)||(601514-601727)
chr8 (1-215)||(29237217-29237430)
chr8 (1-215)||(35509280-35509493)
chr8 (1-215)||(33762527-33762736)
chr8 (1-196)||(8608304-8608498)
chr8 (1-196)||(13106870-13107064)
chr8 (1-196)||(33707272-33707466)
chr8 (1-196)||(38548660-38548854)
chr8 (1-215)||(15308071-15308284)
chr8 (1-215)||(15488440-15488653)
chr8 (1-215)||(27404276-27404489)
chr8 (1-186)||(42943265-42943449)
chr8 (1-186)||(22273730-22273914)
chr8 (10-201)||(5037888-5038076)
chr8 (1-196)||(26238792-26238986)
chr8 (1-214)||(41823956-41824168)
chr8 (13-201)||(41040798-41040986)
chr8 (10-214)||(3152032-3152235)
chr8 (1-186)||(43261978-43262160)
chr8 (13-161)||(13484623-13484770)
chr8 (1-85)||(15562490-15562573)
chr8 (10-136)||(17807094-17807220)
chr8 (168-215)||(8608436-8608483)
chr8 (168-215)||(13107002-13107049)
chr8 (168-215)||(13283839-13283886)
chr8 (168-215)||(27692681-27692728)
chr8 (133-196)||(601499-601561)
chr8 (168-215)||(22273735-22273782)
chr8 (133-196)||(27692632-27692694)
chr8 (133-196)||(29238982-29239044)
chr8 (168-215)||(33707404-33707451)
chr8 (133-196)||(33761301-33761363)
chr8 (133-196)||(33762512-33762574)
chr8 (133-196)||(35509446-35509508)
chr8 (133-196)||(35510614-35510676)
chr8 (168-215)||(38548675-38548722)
chr8 (168-215)||(42943270-42943317)
chr8 (168-214)||(26238924-26238970)
chr8 (148-196)||(27404457-27404504)
chr8 (35-133)||(29694208-29694306)
chr8 (147-196)||(15308056-15308104)
chr8 (147-196)||(15488425-15488473)
chr8 (168-216)||(27404408-27404456)
[»] chr4 (45 HSPs)
chr4 (1-215)||(43507233-43507446)
chr4 (1-215)||(4173550-4173763)
chr4 (1-215)||(33265820-33266033)
chr4 (1-215)||(43508463-43508676)
chr4 (1-215)||(33264448-33264662)
chr4 (1-215)||(43520919-43521132)
chr4 (1-216)||(319339-319553)
chr4 (1-215)||(320710-320923)
chr4 (1-186)||(51013725-51013909)
chr4 (1-215)||(833289-833502)
chr4 (1-215)||(834852-835065)
chr4 (1-215)||(5437877-5438090)
chr4 (1-215)||(5439457-5439670)
chr4 (1-201)||(35401815-35402014)
chr4 (1-196)||(20493893-20494087)
chr4 (10-186)||(49524572-49524747)
chr4 (10-166)||(39345639-39345795)
chr4 (1-214)||(48645321-48645533)
chr4 (1-125)||(4169752-4169876)
chr4 (1-196)||(54387712-54387905)
chr4 (13-161)||(42982315-42982463)
chr4 (13-161)||(11254197-11254344)
chr4 (122-215)||(4172299-4172391)
chr4 (10-87)||(20820060-20820137)
chr4 (21-86)||(41759492-41759557)
chr4 (1-92)||(2691439-2691530)
chr4 (133-196)||(43520904-43520966)
chr4 (133-196)||(320695-320757)
chr4 (133-196)||(833455-833517)
chr4 (133-196)||(834837-834899)
chr4 (133-196)||(5438043-5438105)
chr4 (133-196)||(33264615-33264677)
chr4 (133-196)||(33265805-33265867)
chr4 (133-196)||(43507399-43507461)
chr4 (133-196)||(43508448-43508510)
chr4 (168-215)||(51013730-51013777)
chr4 (133-186)||(4173545-4173597)
chr4 (133-196)||(4172344-4172406)
chr4 (133-196)||(5439442-5439504)
chr4 (168-215)||(20494025-20494072)
chr4 (28-131)||(26397819-26397922)
chr4 (168-215)||(35401947-35401994)
chr4 (168-215)||(49524577-49524624)
chr4 (148-196)||(319520-319567)
chr4 (166-214)||(11641901-11641949)
[»] chr5 (33 HSPs)
chr5 (1-215)||(17577745-17577958)
chr5 (1-215)||(21842802-21843015)
chr5 (1-215)||(40782022-40782234)
chr5 (1-215)||(29620204-29620416)
chr5 (1-196)||(7269275-7269469)
chr5 (1-196)||(28813594-28813788)
chr5 (1-159)||(2852952-2853110)
chr5 (1-201)||(12738560-12738759)
chr5 (1-201)||(12801383-12801582)
chr5 (1-201)||(30463966-30464165)
chr5 (1-196)||(42471614-42471808)
chr5 (1-166)||(8541129-8541294)
chr5 (13-196)||(28821920-28822101)
chr5 (1-201)||(32134297-32134501)
chr5 (13-201)||(34328647-34328838)
chr5 (106-215)||(24539933-24540041)
chr5 (1-136)||(41493910-41494045)
chr5 (14-120)||(27077371-27077477)
chr5 (168-215)||(42471746-42471793)
chr5 (168-215)||(7269290-7269337)
chr5 (133-196)||(17577730-17577792)
chr5 (133-196)||(24539994-24540056)
chr5 (129-201)||(2181520-2181591)
chr5 (168-216)||(32134434-32134482)
chr5 (168-215)||(12738580-12738627)
chr5 (168-215)||(12801403-12801450)
chr5 (169-216)||(28813608-28813655)
chr5 (134-186)||(21842797-21842848)
chr5 (168-215)||(2181540-2181587)
chr5 (168-215)||(30464098-30464145)
chr5 (28-85)||(19998381-19998438)
chr5 (1-54)||(40780616-40780669)
chr5 (133-196)||(29620370-29620431)
[»] chr3 (57 HSPs)
chr3 (1-215)||(46308873-46309086)
chr3 (1-215)||(46310246-46310459)
chr3 (1-215)||(53092689-53092902)
chr3 (1-215)||(3150318-3150531)
chr3 (1-215)||(38193320-38193533)
chr3 (1-215)||(46609215-46609428)
chr3 (1-215)||(53094083-53094296)
chr3 (1-215)||(53187808-53188021)
chr3 (1-215)||(2661718-2661931)
chr3 (1-215)||(44795700-44795913)
chr3 (1-215)||(46611113-46611326)
chr3 (1-196)||(7883394-7883588)
chr3 (1-215)||(28626477-28626690)
chr3 (1-196)||(35903891-35904085)
chr3 (1-196)||(41979181-41979375)
chr3 (1-186)||(54899913-54900097)
chr3 (1-215)||(38191961-38192162)
chr3 (10-214)||(611033-611236)
chr3 (13-201)||(17516797-17516984)
chr3 (10-201)||(2378807-2378997)
chr3 (10-196)||(54412376-54412561)
chr3 (13-201)||(21350429-21350616)
chr3 (10-214)||(51686205-51686408)
chr3 (1-214)||(46113916-46114128)
chr3 (1-201)||(23291636-23291834)
chr3 (10-185)||(27897225-27897399)
chr3 (13-181)||(43766891-43767058)
chr3 (1-180)||(42282318-42282496)
chr3 (13-183)||(44268059-44268228)
chr3 (13-201)||(30598415-30598602)
chr3 (21-214)||(48829442-48829634)
chr3 (133-196)||(2661703-2661765)
chr3 (133-196)||(3150484-3150546)
chr3 (168-215)||(7883526-7883573)
chr3 (168-215)||(35904023-35904070)
chr3 (133-196)||(53187974-53188036)
chr3 (134-196)||(53092856-53092917)
chr3 (172-216)||(44795733-44795777)
chr3 (168-215)||(27897348-27897395)
chr3 (133-196)||(28626643-28626705)
chr3 (133-196)||(38193305-38193367)
chr3 (133-196)||(44795685-44795747)
chr3 (133-196)||(46310231-46310293)
chr3 (133-196)||(46609381-46609443)
chr3 (133-196)||(53094068-53094130)
chr3 (168-215)||(54412391-54412438)
chr3 (168-214)||(42282318-42282364)
chr3 (169-215)||(54899918-54899964)
chr3 (133-186)||(46309039-46309091)
chr3 (168-216)||(21350448-21350496)
chr3 (168-215)||(17516817-17516864)
chr3 (168-215)||(41979196-41979243)
chr3 (168-215)||(44268179-44268226)
chr3 (21-79)||(24846491-24846548)
chr3 (147-196)||(38192129-38192177)
chr3 (168-217)||(43766889-43766938)
chr3 (133-186)||(46611108-46611160)
[»] chr2 (29 HSPs)
chr2 (1-215)||(16764422-16764634)
chr2 (1-215)||(24205664-24205877)
chr2 (1-215)||(2577291-2577503)
chr2 (1-215)||(14387415-14387628)
chr2 (1-215)||(6783430-6783634)
chr2 (1-215)||(37021996-37022208)
chr2 (1-196)||(40561707-40561901)
chr2 (10-201)||(39663229-39663417)
chr2 (1-196)||(19906748-19906942)
chr2 (10-196)||(16376811-16376996)
chr2 (13-201)||(42517635-42517822)
chr2 (10-201)||(39456604-39456794)
chr2 (13-196)||(17697938-17698120)
chr2 (1-211)||(19581480-19581689)
chr2 (35-196)||(6799236-6799396)
chr2 (1-136)||(37646366-37646501)
chr2 (13-196)||(34400392-34400568)
chr2 (1-132)||(161967-162098)
chr2 (1-131)||(31474972-31475103)
chr2 (168-215)||(40561722-40561769)
chr2 (133-196)||(6783587-6783649)
chr2 (133-196)||(16764407-16764469)
chr2 (168-215)||(19906880-19906927)
chr2 (168-214)||(19581612-19581658)
chr2 (133-195)||(24205830-24205891)
chr2 (133-196)||(37021981-37022042)
chr2 (133-196)||(14387581-14387643)
chr2 (168-215)||(16376934-16376981)
chr2 (133-196)||(2577276-2577337)
[»] chr7 (37 HSPs)
chr7 (13-215)||(29994955-29995156)
chr7 (1-215)||(35403429-35403642)
chr7 (1-215)||(20479530-20479742)
chr7 (1-215)||(35402035-35402248)
chr7 (1-162)||(27664496-27664657)
chr7 (1-201)||(13169507-13169706)
chr7 (1-209)||(47384360-47384567)
chr7 (1-185)||(77854-78037)
chr7 (1-201)||(39857711-39857910)
chr7 (1-201)||(37114007-37114206)
chr7 (13-201)||(24226659-24226846)
chr7 (13-201)||(35691505-35691692)
chr7 (10-201)||(6605221-6605411)
chr7 (10-201)||(34775073-34775263)
chr7 (10-201)||(45361091-45361290)
chr7 (13-145)||(48227820-48227952)
chr7 (13-133)||(46437185-46437305)
chr7 (13-201)||(22211597-22211773)
chr7 (1-196)||(37791720-37791914)
chr7 (44-201)||(38472369-38472525)
chr7 (13-201)||(22155682-22155858)
chr7 (10-196)||(23904658-23904856)
chr7 (10-130)||(13039536-13039656)
chr7 (19-102)||(38549631-38549714)
chr7 (125-201)||(46437825-46437900)
chr7 (168-215)||(77858-77905)
chr7 (133-196)||(29995109-29995171)
chr7 (133-196)||(35403414-35403476)
chr7 (168-215)||(35691625-35691672)
chr7 (168-215)||(39857843-39857890)
chr7 (168-215)||(22211617-22211664)
chr7 (169-215)||(38472459-38472505)
chr7 (1-54)||(34785084-34785137)
chr7 (169-214)||(47384493-47384538)
chr7 (168-212)||(13169530-13169574)
chr7 (133-196)||(20479515-20479576)
chr7 (168-216)||(23904795-23904842)
[»] scaffold0058 (3 HSPs)
scaffold0058 (44-215)||(7047-7217)
scaffold0058 (1-74)||(14293-14366)
scaffold0058 (133-196)||(7032-7094)
[»] scaffold1712 (2 HSPs)
scaffold1712 (1-215)||(1048-1261)
scaffold1712 (133-196)||(1214-1276)
[»] scaffold0081 (2 HSPs)
scaffold0081 (1-215)||(54069-54281)
scaffold0081 (133-196)||(54054-54115)
[»] scaffold0345 (2 HSPs)
scaffold0345 (1-201)||(1381-1578)
scaffold0345 (169-215)||(1401-1447)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-214)||(106752-106937)
[»] scaffold0001 (1 HSPs)
scaffold0001 (10-128)||(63617-63735)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 32518520 - 32518307
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  32518520 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgac 32518421  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32518420 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 32518322  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  32518321 aggaccaaattgatg 32518307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18645127 - 18644914
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  18645127 aatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgtaacgttaacctctgac 18645028  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18645027 aaaacttaccacgttagatgtcacgcaagcagggaccaaactgatcgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 18644929  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  18644928 aggaccaaattgatg 18644914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 3480680 - 3480468
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||  ||||||    
T  3480680 aatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaatctctgac 3480581  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||    
T  3480580 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaa-ttcca 3480483  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  3480482 aggaccaaattgatg 3480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 32454314 - 32454527
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||| ||    
T  32454314 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctaac 32454413  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||| |||| ||| ||||||||||||| |||||    
T  32454414 aaagcttaccacgtcagatgccacgcaagcagagaccaaactgattgatttacacaaaattt-cgaaggacgaaatcgatagatttacacaaaa-ttcca 32454511  T
Q  201 aggaccaaattgatga 216  Q
    ||||||||||||||||    
T  32454512 aggaccaaattgatga 32454527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 32437210 - 32437406
Alignment:
Q  18 tgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttag 117  Q
    |||||||||||||||  |||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  32437210 tgaatttacaaaatgccaatcaaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcag 32437309  T
Q  118 atgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||  |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  32437310 ataccacgcaagcagggaccaaactgattgatttacacaacatttcc-gaggaccaaattgatggatttacacaaaattttcacggaccaaattgatg 32437406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 9400058 - 9399851
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| |||||||||| ||||||||||||| | ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||    
T  9400058 aatatctaattagtccccgaatttacaaaatatcaatcaaatcagtctctccgttaagttggtctgttaacagaggtgacgtgtaacgttaacctcttac 9399959  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||||||||| |||||||||||||||| || ||||||||||||| ||||||  | ||||| ||||||||| ||||| || |||||| |||    
T  9399958 aaggcttaccacgttagatgccacgcaagcagggacctaattgattgatttacagaaaattgtc-aaggatcaaattgattgattttcagaaaattgcca 9399860  T
Q  201 aggaccaaa 209  Q
    |||||||||    
T  9399859 aggaccaaa 9399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 11357217 - 11357020
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||| ||    
T  11357217 aatagcaatttagtccctgaatttacaaaatgtcattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttac 11357120  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||| || |||||||||||||||||| || || |||||| |||    
T  11357119 aaggcttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggaatttcagaaaattgcca 11357021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 20525345 - 20525163
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |||| |||||||||    
T  20525345 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgcaacgttaacctcttacaaggcttaccac 20525246  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||| ||| ||||||||||||||| ||||||||||||| || ||| || || |||||||||||||||||| || ||||||    
T  20525245 gtcagatgccacacaagcagggaccaaattgattgatttacagaacattgcc-aatgaccaaattgatggattttcagaaaatt 20525163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 6902921 - 6902727
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||    
T  6902921 aatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaccgttaacctcttac 6902822  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||  |||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||  | |||||| |||||||| ||||| || ||||||    
T  6902821 aagacttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgtc-aaggactaaattgattgattttcagaaaatt 6902727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21068691 - 21068903
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  ||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||  |||||  ||| ||    
T  21068691 aatatctatttagtcctcgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtactgttaatctcttac 21068790  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| |||| ||||||||||| |||||||| ||||||||||| | |||||| || ||||||||||||||| ||||| || ||||||  ||    
T  21068791 aaggcttaccacgtcagatatcacgcaagcaaggaccaaattgattgatttatagaaaattgcc-aaggaccaaattgattgattttcagaaaattgtca 21068889  T
Q  201 aggaccaaattgat 214  Q
    || | |||||||||    
T  21068890 agaatcaaattgat 21068903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 10569942 - 10569730
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||||||||||  ||||||||||||||||||| || ||||||| |||||||||||||||||||  |||||| ||| ||    
T  10569942 aatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgtcaaattggtctgttaacggaggtgacgtgtactgttaacctcttac 10569843  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
       |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |||||| ||||| |||||||||||| ||||| || |||||| |||    
T  10569842 gtggcttaccatgtcagatgccacgcaagcagggatcaaattgattgatttacagaaaattgccaaa-gaccaaattgattgattttcagaaaattgcca 10569744  T
Q  201 aggaccaaattgat 214  Q
    |||| |||||||||    
T  10569743 aggaacaaattgat 10569730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 13610756 - 13610940
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||    
T  13610756 aatatcaaattagtccat-aatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaaccccttac 13610854  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||| ||||| ||||||| |    ||||     ||||||||||| ||||||||| ||||||||||||||||||||| || ||||||    
T  13610855 aaggcttaccacgtcagatgacacgcaaac----acca-----attgatttacaaaaaatttcc-aaggaccaaattgatggattttcagaaaatt 13610940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 33267127 - 33267287
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||| || ||||||| ||||||| |||||||||||||| |||||||| |||| || |||||||||||||||||||  |||||| ||| ||    
T  33267127 aatatctatttagttcccgaatttataaaatgtcaatcaaatcagtccttccgttaaattggcctgttaacggaggtgacgtgtagtgttaacctcttac 33267226  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatt 161  Q
    || ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  33267227 aaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacacaaaatt 33267287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21091160 - 21091354
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||| ||||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||||||||||||  |||||  ||| ||    
T  21091160 aatatctatttagtccccgaatttataaaatgtcaatcaaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctcttac 21091259  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||| |||||||||||||||| |||| ||| ||||||||||| | ||||||  | ||||||||||||||| ||||| || ||||||    
T  21091260 aaggcttaccacgtcagatgtcacgcaagcatggactaaattgattgatttatagaaaattgtc-aaggaccaaattgattgattttcataaaatt 21091354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 7051230 - 7051074
Alignment:
Q  39 aaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggacca 138  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||  |||||| ||| |||| ||||||||||| |||||||||||||||||||||||    
T  7051230 aaattagtccctccattaagttggtctgttaacggaggtgacgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 7051131  T
Q  139 aactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||||| |||||| || ||||| ||||||||| ||||| || ||||||    
T  7051130 aattgattgatttacagaaaattgcc-aaggaacaaattgattgattttcagaaaatt 7051074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21045376 - 21045588
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||| ||||||||||| | ||  ||| ||||||||||||||  |||||  ||| ||    
T  21045376 aatatctatttagtccccgaatttacaaaatgtcaatcaaatcagtccatccgttaagttagcctggtaatggaggtgacgtgtactgttaatctcttac 21045475  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| |||| |||||||||||||||||||| |||||||||||   ||||||  | ||||||||||||||| ||||| || ||||||  ||    
T  21045476 aaggcttaccacgtcagatatcacgcaagcagggaccaaattgattgatttattaaaaattgtc-aaggaccaaattgattgattttcagaaaattgtca 21045574  T
Q  201 aggaccaaattgat 214  Q
    || | |||||||||    
T  21045575 agaatcaaattgat 21045588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 7371253 - 7371391
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||| ||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||    
T  7371253 gtccttgaatttataaaatgtcaatcaaatcagtccctcctttaagttggtctgttaaaggaggtgacgtgtaacattaacctcttataagacttaccac 7371352  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgattt 151  Q
    || ||||  ||||||||||||||||||| |||| |||||    
T  7371353 gtcagataccacgcaagcagggaccaaattgatggattt 7371391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 14337750 - 14337862
Alignment:
Q  19 gaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttaga 118  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| || ||||| |||||||| ||||   ||||| ||| || |||||||||| || |||    
T  14337750 gaatttacaaaatatcaatcaaatcagtccctccattaagttggcctgttaacagaggtgacatgtactattaacctcttac-aagcttaccatgtcaga 14337848  T
Q  119 tgtcacgcaagcag 132  Q
    ||||||||||||||    
T  14337849 tgtcacgcaagcag 14337862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 18644961 - 18644899
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  18644961 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcataaaatt 18644899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 32518354 - 32518292
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  32518354 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 32518292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 11357086 - 11357040
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  11357086 gaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 11357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 32437359 - 32437421
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||| ||  ||||||||||||||||||| || ||||||    
T  32437359 ggaccaaattgatggatttacacaaaattttcac-ggaccaaattgatggattttcagaaaatt 32437421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 7051136 - 7051090
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    ||||||||||||| |||||||| |||||| ||||||| |||||||||    
T  7051136 ggaccaaattgattgatttacagaaaattgccaaggaacaaattgat 7051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 13610892 - 13610925
Alignment:
Q  182 gatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||||||||||||||||||||||||    
T  13610892 gatttacaaaaaatttccaaggaccaaattgatg 13610925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 3480514 - 3480453
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  3480514 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcagaaaatt 3480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 37345985 - 37345772
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37345985 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaatgttaacctctgac 37345886  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37345885 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgacttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 37345787  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  37345786 aggaccaaattgatg 37345772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 25276808 - 25277021
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  25276808 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgac 25276907  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  25276908 aaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 25277006  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  25277007 aggaccaaattgatg 25277021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27089302 - 27089089
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  27089302 aatatcaaattaatccctgaatttacaaaatgtcaatcaaatcagtccttccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgac 27089203  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  27089202 aaagcttaccacgttagatgccacgcaagcaggaaccaaactgattgatttacacaaaatttcc-aatgaccaaattgatggatttacacaaaatttcca 27089104  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  27089103 aggaccaaattgatg 27089089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 8169591 - 8169378
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||| ||    
T  8169591 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctaac 8169492  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  8169491 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattcacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 8169393  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  8169392 aggaccaaattgatg 8169378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 26223653 - 26223866
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  26223653 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 26223752  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  26223753 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttaaacaaaatttcc-aaggaccaaattgatggatttacacaaaattttca 26223851  T
Q  201 aggaccaaattgatg 215  Q
    | |||||||||||||    
T  26223852 acgaccaaattgatg 26223866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 8168008 - 8168220
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  8168008 aatatcaaattagtccctgaatgtacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 8168107  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  8168108 aaagcttaccacgtcagatgccacgcaagta-ggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 8168205  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  8168206 aggaccaaattgatg 8168220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 1444204 - 1443992
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  1444204 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctgac 1444105  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| |||||    
T  1444104 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-tgaaggacgaaattgatggatttacacaaaa-ttcca 1444007  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  1444006 aggaccaaattgatg 1443992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 9120105 - 9120317
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||  ||||||| |||||||||| |||||||| ||||||    
T  9120105 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacgggggtgacgtgtcacgttaacctctgac 9120204  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| |||||    
T  9120205 aaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattt-tgaaggacgaaattgatggatttacacaaaa-ttcca 9120302  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  9120303 aggaccaaattgatg 9120317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 47011522 - 47011734
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||| || |||||||||||||||||| |||||||| ||||||    
T  47011522 aatatcaaattagtccctgaatttacaaaaagtcaatcaactcagtccctccgttaatttggcctgttaacggaggtgacgtgtcacgttaacctctgac 47011621  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||    
T  47011622 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaa-ttcca 47011719  T
Q  201 aggaccaaattgatg 215  Q
    |||| ||||||||||    
T  47011720 aggatcaaattgatg 47011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 34776635 - 34776829
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  34776635 aatatcaaattagtccctgaatttacaaaatttcaatcagatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 34776734  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  34776735 aaagcttaacacgtcagatgaaacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 34776829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 46582076 - 46582270
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  46582076 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 46582175  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||| | ||| ||||||||||||||||| || ||||||    
T  46582176 aaagcttaccacgtcagatgccacgcaagcagggaccaaaatgatagatttacacaaaattttc-aagaaccaaattgatggattttcataaaatt 46582270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 4854479 - 4854670
Alignment:
Q  4 atcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaa 103  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  4854479 atcaaattagtccctgaatttacaaaatttcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctctgacaaa 4854578  T
Q  104 gcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||    
T  4854579 gcttaccacgtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatgtattttcagaaaatt 4854670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 33599284 - 33599478
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||| ||    
T  33599284 aatatcaaattaatctctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacgtgtaactttaacctcttac 33599383  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  33599384 aaaacttaccacgtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 33599478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 45044993 - 45045185
Alignment:
Q  8 aattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagctt 107  Q
    |||| ||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||    
T  45044993 aattcgtccctgaatttacaaaatgtcaatcaaattagtctctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggctt 45045092  T
Q  108 accacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||| || |||||| ||||    
T  45045093 accacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgcc-aagaaccaaattgatggattttcagaaaattaccaa 45045185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 3011921 - 3012120
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  3011921 aatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttggtctattaacggagatgacgtgtaacgttaacctcttac 3012020  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||| ||||| ||||  ||||||||||| ||||||| ||||||||||||| |||| || | ||||||||||||||||||||| || |||||| |||    
T  3012021 aaggcttatcacgtcagataccacgcaagcagagaccaaattgattgatttacagaaaa-ttgctaaggaccaaattgatggattttcagaaaattgcca 3012119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 2871082 - 2870905
Alignment:
Q  18 tgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttag 117  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||| |||| ||||||||||| ||    
T  2871082 tgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgctctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccacgtcag 2870983  T
Q  118 atgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||| ||| ||||||||||||||| |||||||||| || |||||| || ||||||||||||||||||||| || ||||||    
T  2870982 atgccacacaagcagggaccaaattgattgatttgcagaaaattgcc-aaggaccaaattgatggattttcataaaatt 2870905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 51894642 - 51894832
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||| ||||  |||||    
T  51894642 ttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaaactcttacaagacttac 51894741  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||| | ||||| ||||| ||||||||||||| ||||||||||||| ||||||  | || |||||||||||||||||| || |||||| ||||    
T  51894742 cacatcagatgccacgccagcagggaccaaattgattgatttacagaaaattgtc-aacgaccaaattgatggattttcagaaaattgccaa 51894832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 50554238 - 50554423
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||  ||||||    
T  50554238 ttagttcctgaatttgcaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacgggggtgacgtgtaacgttaacctcttacatggcttac 50554337  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||| | |||||| ||||  |||||||||| |||||||||||||||||||| || ||||||||||||||||||||| || ||||||    
T  50554338 cacgtcaaatgtcatgcaataagggaccaaattgattgatttacacaaaattgcc-aaggaccaaattgatggattttcagaaaatt 50554423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 31236885 - 31237084
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  || ||    
T  31236885 aatatctatttagttcctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaaccgcttac 31236984  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||  ||||||||||| ||||||| ||||||||||||| ||||||  | |||||||||||| |||||||| || |||||| |||    
T  31236985 aaggcttaccacgtcagataccacgcaagcagagaccaaattgattgatttacataaaattgtc-aaggaccaaattaatggattttcagaaaattccca 31237083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 52641973 - 52642166
Alignment:
Q  20 aatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagat 119  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||| ||| ||||| |||||||||| ||||    
T  52641973 aatttacaaaatgttcatcaaatcagtccctccgttaagttggtatattaacggaggtgacatgtaccgttaacttcttacaaaacttaccacgtcagat 52642072  T
Q  120 gtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    | ||| ||||||||||||||| |||||||||| || ||||||| | || |||||||||||| ||||| || |||||| ||||||| || ||||||    
T  52642073 gccacacaagcagggaccaaattgattgattttcagaaaattt-ctaatgaccaaattgattgattttcagaaaattgccaaggaacagattgat 52642166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23577702 - 23577920
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||  ||||||| |||||||| || ||||||||||| |||||||| |||| || |||||||||||||||||| |||||||| ||||||    
T  23577702 aatatcaaattagtcaatgaatttgcaaaatgtcaaccaaatcagtccgtccgttaaattggcctgttaacggaggtgacgtgtcacgttaacctctgac 23577801  T
Q  101 aaagcttaccac-----gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaat 195  Q
    ||||||||||||     || ||||  ||||||| ||||||  || || |||||||| ||| |||||| | |||||| ||||| |||||||||||||||||    
T  23577802 aaagcttaccacgtcaagtcagatcccacgcaaccagggaaaaagcttattgatttgcac-aaattttcgaaggacgaaatttatggatttacacaaaat 23577900  T
Q  196 ttccaaggaccaaattgatg 215  Q
    || |||||||||||||||||    
T  23577901 tttcaaggaccaaattgatg 23577920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 20945013 - 20944900
Alignment:
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  20945013 aaagcttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 20944915  T
Q  201 aggaccaaattgatg 215  Q
    || ||||||||||||    
T  20944914 agaaccaaattgatg 20944900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 6816906 - 6817053
Alignment:
Q  5 tcaaattagtccctgaattta-caaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaa 103  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||| ||||     
T  6816906 tcaaattcgtccctgaattttgcaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaag 6817005  T
Q  104 gcttaccacgttagatgtcacgcaagcagggaccaaactgattgattt 151  Q
    | ||||||||| ||||| ||||||| || |||||||| |||| |||||    
T  6817006 ggttaccacgtcagatgccacgcaaacaaggaccaaattgatagattt 6817053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 37088140 - 37087975
Alignment:
Q  20 aatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagat 119  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | ||||||| | |||||||||| |||||| ||| ||||  ||||||| || ||||    
T  37088140 aatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggtgatgacgtgtaaagttaacctcttacaagacttaccaagtcagat 37088041  T
Q  120 gtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    | ||| |||| |||||||||| ||||||||||| | ||||||  | |||| |||||||||| |||||    
T  37088040 gccacacaagtagggaccaaattgattgatttagagaaaattgtc-aagggccaaattgattgattt 37087975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 25276974 - 25277055
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  25276974 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggatttacataaaatttccaaggaccaaattgatg 25277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 4854608 - 4854655
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  4854608 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 4854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 33599416 - 33599463
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33599416 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 33599463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 34776767 - 34776814
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  34776767 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 34776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 37345819 - 37345757
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  37345819 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 37345757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 50554361 - 50554408
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  50554361 ggaccaaattgattgatttacacaaaattgccaaggaccaaattgatg 50554408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 27089135 - 27089074
Alignment:
Q  134 gaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  27089135 gaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 27089074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 8168173 - 8168235
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  8168173 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 8168235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 8169425 - 8169363
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  8169425 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 8169363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 25277008 - 25277070
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||| ||||||||||| ||||||||||||||||||| || ||||||    
T  25277008 ggaccaaattgatggatttacataaaatttccaa-ggaccaaattgatggattttcagaaaatt 25277070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 3369513 - 3369627
Alignment:
Q  18 tgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttag 117  Q
    ||||||||| | |||| ||||||||  ||| |||||||||||||| || |||||||||||||| ||||  ||| || ||| |||| ||||  || || ||    
T  3369513 tgaatttaccacatgtcaatcaaattcgtcactccgttaagttggcctgttaacggaggtgacatgtattgtttacctctcacaaggcttgtcatgtcag 3369612  T
Q  118 atgtcacgcaagcag 132  Q
    ||||||| |||||||    
T  3369613 atgtcacacaagcag 3369627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 20944947 - 20944884
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaattt 197  Q
    |||| ||| |||| |||||||||||||||||||| | ||||||||||||||||| || |||||||    
T  20944947 ggacgaaattgatggatttacacaaaatttccaa-gaaccaaattgatggattttcagaaaattt 20944884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 2870967 - 2870920
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| ||||| || |||||| ||||||||||||||||||    
T  2870967 ggaccaaattgattgatttgcagaaaattgccaaggaccaaattgatg 2870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 26223819 - 26223881
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||| ||| | ||||||||||||||||| || ||||||    
T  26223819 ggaccaaattgatggatttacacaaaattttcaacg-accaaattgatggattttcagaaaatt 26223881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 45045118 - 45045165
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||| ||||||||||||    
T  45045118 ggaccaaattgattgatttacagaaaattgccaagaaccaaattgatg 45045165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 46582208 - 46582255
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| |||||||||||||||| |||| ||||||||||||    
T  46582208 ggaccaaaatgatagatttacacaaaattttcaagaaccaaattgatg 46582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 3012054 - 3012100
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||    
T  3012054 gaccaaattgattgatttacagaaaattgctaaggaccaaattgatg 3012100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 23577887 - 23577935
Alignment:
Q  147 gatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||||| ||| ||||||||||||||||||| || ||||||    
T  23577887 gatttacacaaaattttcaa-ggaccaaattgatggattttcagaaaatt 23577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47013140 - 47013087
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 54  Q
    ||||||||||||||||||||||||   ||| ||  |||||||||||||||||||    
T  47013140 aatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgt 47013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 1444038 - 1443977
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  1444038 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcagaaaatt 1443977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 9120271 - 9120332
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  9120271 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcagaaaatt 9120332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 27692860 - 27692648
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  27692860 aatatcaaattagtccctgaatttacaaaatgtcaattaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 27692761  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27692760 aaagcttaccacgtaagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 27692662  T
Q  201 aggaccaaattgat 214  Q
    ||||||||||||||    
T  27692661 aggaccaaattgat 27692648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 29239210 - 29238997
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  29239210 aatatcaaattagtccctgaatttacaaaatatcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 29239111  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  29239110 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 29239012  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  29239011 aggaccaaattgatg 29238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33761135 - 33761348
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  33761135 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgttacgttaacctctgac 33761234  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  33761235 aaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 33761333  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  33761334 aggaccaaattgatg 33761348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 35510842 - 35510629
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  35510842 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtatcacgttaacctctgac 35510743  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  35510742 aaagcttaacacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 35510644  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  35510643 aggaccaaattgatg 35510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 13284018 - 13283824
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13284018 aatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 13283919  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  13283918 aaagcttatcacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 13283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 601727 - 601514
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  601727 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtttcacgttaacctctgac 601628  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| | ||  ||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||    
T  601627 aaagcttaccacgtcaaataccacgcaagcagggaccaaactgattgatttacagaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 601529  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  601528 aggaccaaattgatg 601514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29237217 - 29237430
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||    
T  29237217 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 29237316  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  29237317 aaagcttaccacgtcagatgccacgcaagcaaggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 29237415  T
Q  201 aggaccaaattgatg 215  Q
    |||  ||||||||||    
T  29237416 agggtcaaattgatg 29237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 35509280 - 35509493
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||||| ||||||    
T  35509280 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttgacctgttaacgaaggtgacgtgtcacgttaacctctgac 35509379  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||    
T  35509380 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacaaaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 35509478  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  35509479 aggaccaaattgatg 35509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 33762736 - 33762527
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |    |    
T  33762736 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacct----c 33762641  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  33762640 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattcacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 33762542  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  33762541 aggaccaaattgatg 33762527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8608304 - 8608498
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  8608304 aatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 8608403  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  8608404 aaagcttaccacgtcagatgcaacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 8608498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 13106870 - 13107064
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13106870 aatatcaaattagtccctgaatttataaaatttcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 13106969  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  13106970 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 13107064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 33707272 - 33707466
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  33707272 aatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 33707371  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||    
T  33707372 aaagcttaccacgtcagatgtcaagcaagcagggaccaaactgattgatttacacaaaattttc-aaggaccaaattgatggattttcataaaatt 33707466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 38548854 - 38548660
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  38548854 aatatcaaattaatccctgaatttacaaaatttcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 38548755  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||    
T  38548754 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttc-aaggaccaaattgatggattttcagaaaatt 38548660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15308284 - 15308071
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  15308284 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 15308185  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||   |||||| |||| |||||||||| ||||||||||||    
T  15308184 aaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatacaaaattt-tgaaggacgaaatcgatggatttaaacaaaatttcca 15308086  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  15308085 aggaccaaattgatg 15308071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15488653 - 15488440
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  15488653 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 15488554  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||   |||||| |||| |||||||||| ||||||||||||    
T  15488553 aaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatacaaaattt-tgaaggacgaaatcgatggatttaaacaaaatttcca 15488455  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  15488454 aggaccaaattgatg 15488440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 27404276 - 27404489
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| |||||||| |||||| ||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  27404276 aatatcaaaatagtccctaaatttataaaatgtcaatcaaattagtcccttcgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 27404375  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||    
T  27404376 aaagcgtaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt-cgaatgactaaattgatgaatttacacaaaatttcca 27404474  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  27404475 aggaccaaattgatg 27404489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 42943449 - 42943265
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||    
T  42943449 aatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttac 42943350  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    || ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| || |||||||||||||||||||||    
T  42943349 aaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggattt 42943265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 22273914 - 22273730
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||    
T  22273914 aatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttac 22273815  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    || ||||||||||| ||||||||| ||||||||||||||| ||||||||||||| |||||| || |||||||||||||||||||||    
T  22273814 aaggcttaccacgtcagatgtcacacaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggattt 22273730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 5038076 - 5037888
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||| ||||||    
T  5038076 ttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctcttacaaggcttac 5037977  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| ||||| |||||||  | |||||||| ||||||||||||| |||| || | ||||||||  ||||||||||| || |||||| ||||    
T  5037976 cacgtcagatgccacgcaa--atggaccaaattgattgatttacagaaaa-ttgctaaggaccagcttgatggattttcagaaaattaccaa 5037888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 26238792 - 26238986
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||| |||||  |||||| ||| ||    
T  26238792 aatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgttaagttagtctgttaacggaggtgatgtgtactgttaacctcttac 26238891  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||| || ||||||||||||||| ||||| || ||||||    
T  26238892 aaggcttaccacgtcagatgtcacgcaagcatggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgattgattttcagaaaatt 26238986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 41823956 - 41824168
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||| ||    
T  41823956 aatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtccctccgttaagttggtctattaacggaggtgacttgtacagttaacctcttac 41824055  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |  ||||||||||| ||| | ||||||| ||||||||||| ||||||||||||| |||||| || ||||| ||||||||| ||||| || |||| | | |    
T  41824056 atggcttaccacgtcagaagccacgcaaacagggaccaaattgattgatttacataaaattgcc-aaggatcaaattgattgattttcagaaaagtgcaa 41824154  T
Q  201 aggaccaaattgat 214  Q
    ||||||||||||||    
T  41824155 aggaccaaattgat 41824168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 41040798 - 41040986
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| || ||| ||||  ||||||||    
T  41040798 gtccttgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaacgttgacctcttacaagacttaccac 41040897  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattga-tttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || ||||||||||||||||||||||||| ||||||| |||| | ||||||  | ||||| ||||||||||||||| || |||||| ||||    
T  41040898 gtcagatgtcacgcaagcagggaccaaattgattgattttagagaaaattgtc-aaggagcaaattgatggattttcagaaaattgccaa 41040986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 3152032 - 3152235
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| | ||||  || ||||| ||||| |||||| ||| |||| | ||||    
T  3152032 ttagtcccttaatttacaaaatgtcaatcaaattagtccctctgttaagttggtatgttaatagatgtgacatgtaatgttaacctcttacaaggtttac 3152131  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaa 209  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||||| || || ||| |||||||| ||||| || ||||||  |||||||||||    
T  3152132 cacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgcc-aatgactaaattgattgattttcagaaaattatcaaggaccaaa 3152230  T
Q  210 ttgat 214  Q
    |||||    
T  3152231 ttgat 3152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 43262160 - 43261978
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||  ||||| | || ||||||| ||| ||    
T  43262160 aatatctatttagtcctcgaatttacaaaatgtcaatcaaatcagtctctccgttaagttggtctgttaacgg--gtgacatctaccgttaacctcttac 43262063  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||||||| || ||||||| |||| |||||||||||| |||||    
T  43262062 aaagcttaccacgtctgatgtcacgcaagcagggaccaaattgattgattttcagaaaattttcaaa-gaccaaattgattgattt 43261978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 13484623 - 13484770
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| | | |||| |||||||||    
T  13484623 gtccttgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctattaacgaaggtgacgtg-aacgttaaccttttacaaggcttaccac 13484721  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatt 161  Q
    || ||||| ||| ||||||||||||||| |||| ||||| || ||||||    
T  13484722 gtcagatgccacacaagcagggaccaaattgatggattttcagaaaatt 13484770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15562490 - 15562573
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgta 85  Q
    |||||||| ||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  15562490 aatatcaatttagttcc-gaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgta 15562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 17807094 - 17807220
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||| |||||||||||| || ||||||| ||| |||||| ||||||||| || |||||||||||||| ||||  |||||| ||| |||| ||||||    
T  17807094 ttagtccccgaatttacaaaacgtcaatcaaaccagaccctccattaagttggcctgttaacggaggtgacatgtactgttaacctcttacaaggcttac 17807193  T
Q  110 cacgttagatgtcacgcaagcagggac 136  Q
     | || |||||||||| ||||| ||||    
T  17807194 gatgtcagatgtcacgtaagcatggac 17807220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 8608436 - 8608483
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  8608436 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 8608483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 13107002 - 13107049
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  13107002 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 13107049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 13283886 - 13283839
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  13283886 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 13283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 27692728 - 27692681
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  27692728 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 27692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 601561 - 601499
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  601561 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 601499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 22273782 - 22273735
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  22273782 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 22273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 27692694 - 27692632
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||| ||||| || ||||||    
T  27692694 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatagattttcagaaaatt 27692632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 29239044 - 29238982
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  29239044 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 29238982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 33707404 - 33707451
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  33707404 ggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 33707451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 33761301 - 33761363
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  33761301 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 33761363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 33762574 - 33762512
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  33762574 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 33762512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 35509446 - 35509508
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  35509446 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 35509508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 35510676 - 35510614
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  35510676 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 35510614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 38548722 - 38548675
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  38548722 ggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 38548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 42943317 - 42943270
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  42943317 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 42943270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 26238924 - 26238970
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  26238924 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 26238970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 27404457 - 27404504
Alignment:
Q  148 atttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  27404457 atttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 27404504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 29694306 - 29694208
Alignment:
Q  35 aatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagg 133  Q
    |||||||||||| |||| |||||||| | || ||||||||||||| |||||   |||||  || |||| | ||||||||| | ||| ||||||||||||    
T  29694306 aatcaaatcagttcctctgttaagttagcctgttaacggaggtgatgtgtactattaaccgcttacaaggtttaccacgtcatatgccacgcaagcagg 29694208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 15308104 - 15308056
Alignment:
Q  147 gatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||| ||||||||||||| ||||||||||||||||||| || ||||||    
T  15308104 gatttaaacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 15308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 15488473 - 15488425
Alignment:
Q  147 gatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||| ||||||||||||| ||||||||||||||||||| || ||||||    
T  15488473 gatttaaacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 15488425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 27404408 - 27404456
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatga 216  Q
    |||||||| |||| ||||||||||||||||| || ||| ||||||||||    
T  27404408 ggaccaaactgattgatttacacaaaatttcgaatgactaaattgatga 27404456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 43507233 - 43507446
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||    
T  43507233 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggactgttaacggaggtgacgtgtcacgttaacctctgac 43507332  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  43507333 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 43507431  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  43507432 aggaccaaattgatg 43507446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4173763 - 4173550
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||    
T  4173763 aatatcaaattagtccctgaatttacaaaacgtcaatcaactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacatctgac 4173664  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  4173663 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 4173565  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  4173564 aggaccaaattgatg 4173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 33266033 - 33265820
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||    
T  33266033 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttagtctgttaacggaggtgacgtgtcacgttaacctctgac 33265934  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||    
T  33265933 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacataaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 33265835  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  33265834 aggaccaaattgatg 33265820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43508676 - 43508463
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| ||||||    
T  43508676 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacgaaggtgacgtgtcacgttaacctctgac 43508577  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  43508576 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 43508478  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  43508477 aggaccaaattgatg 43508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33264448 - 33264662
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  33264448 aatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 33264547  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||    
T  33264548 aaagcttaccacgtcagatgccacgtaagcatggaccaaactgattgatttacgcaaaattttcgaaggacgaaattgatggatttacacaaaatttcca 33264647  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  33264648 aggaccaaattgatg 33264662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43521132 - 43520919
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||| |||||| ||||||||||| |||||||| ||||||    
T  43521132 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagttcttccgttaagttgttctgttaacgtaggtgacgtgttacgttaacctctgac 43521033  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  43521032 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttc-aaggaccaaattgatggatttacacaaaatttcca 43520934  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  43520933 aggaccaaattgatg 43520919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 319339 - 319553
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  319339 aatatcaaattagttcctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaacagaggtgacgtgtcacgttaacctctgac 319438  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  319439 aaaacttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatgtatttacacaaaatttcca 319537  T
Q  201 aggaccaaattgatga 216  Q
    ||||||||||||||||    
T  319538 aggaccaaattgatga 319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 320923 - 320710
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||    
T  320923 aatatcaaattagtccttgaaattacaaaatgtcaatcaactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgac 320824  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  320823 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 320725  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  320724 aggaccaaattgatg 320710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 51013909 - 51013725
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  51013909 aatatcaaatgagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 51013810  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  51013809 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattaatttacacaaaatttcc-aaggaccaaattgatggattt 51013725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 833289 - 833502
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  833289 aatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 833388  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| |||||||| ||||| ||||||||||||||||||| ||||  ||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  833389 aaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatgaatttacacaaaattt-cgaaggactaaattgatggatttacacaaaatttcca 833487  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  833488 aggaccaaattgatg 833502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 835065 - 834852
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  835065 aatatcaaaatagtccctgaatttacaaaacgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 834966  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| |||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  834965 aaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaattt-cgaaggactaaattgatggatttacacaaaatttcca 834867  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  834866 aggaccaaattgatg 834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 5437877 - 5438090
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  5437877 aatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 5437976  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| || ||||| ||||| ||||||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  5437977 aaagcgtaacacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaattt-cgaaggactaaattgatggatttacacaaaatttcca 5438075  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  5438076 aggaccaaattgatg 5438090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5439670 - 5439457
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  5439670 aatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 5439571  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| |||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  5439570 aaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaattt-cgaaggactaaattgatggatttacacaaaatttcca 5439472  T
Q  201 aggaccaaattgatg 215  Q
    |||| ||||||||||    
T  5439471 aggatcaaattgatg 5439457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 35401815 - 35402014
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||    
T  35401815 aatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagctggtctgttaacggaggtgacgtgtaacgttaacctcttac 35401914  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||| || |||||| |||    
T  35401915 aaaccttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgcc-aagcaccaaattgatggattttcataaaattgcca 35402013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20493893 - 20494087
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||    
T  20493893 aatatctatttagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttac 20493992  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||  | ||||||||||||||||||||| || ||||||    
T  20493993 aaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattggc-aaggaccaaattgatggattttcagaaaatt 20494087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 49524747 - 49524572
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||    
T  49524747 ttagtccctgaatttacaaaatgtcaatcaaatcagtccttccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttaccaggcttac 49524648  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    ||||| | ||||||||||||||||||||||| ||||||||||||| ||||||  | |||||||||||||||||||||    
T  49524647 cacgtcatatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggaccaaattgatggattt 49524572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 39345639 - 39345795
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||| |||| ||||||    
T  39345639 ttagtccctgaatttacaaaatgtcaatcaaatcagtctctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacaaggcttac 39345738  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaa 166  Q
    ||| | ||||| ||| ||||||||||||||| ||||||||||||| |||||| ||||    
T  39345739 cacataagatgccacacaagcagggaccaaattgattgatttacagaaaattgccaa 39345795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 48645321 - 48645533
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||||||||||  ||||||||||| |||||||| | ||||||| |||||| ||||||||||||  |||||| ||| ||    
T  48645321 aatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtacctccgttcaattggtctgttaacgaaggtgacgtgtattgttaacctcttac 48645420  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||  | ||||| ||||||||| ||||| || |||||| |||    
T  48645421 aaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggatcaaattgattgattttcagaaaattgcca 48645519  T
Q  201 aggaccaaattgat 214  Q
    |||| |||||||||    
T  48645520 aggaacaaattgat 48645533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4169752 - 4169876
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||    
T  4169752 aatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaatggaggtgacgtgtcacgttaacctctgac 4169851  T
Q  101 aaagcttaccacgttagatgtcacg 125  Q
    |||||||||||||| ||||| ||||    
T  4169852 aaagcttaccacgtcagatgccacg 4169876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 54387905 - 54387712
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||||||||||  ||||||||||| | |||||||||||||||| ||||||||||||| ||||| ||||||| ||| ||    
T  54387905 aatatctatttagtcctcgaatttacaaaatgtccatcaaatcagttcatccgttaagttggtctgttaacggaggtga-gtgtaccgttaacctcttac 54387807  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||| | ||| ||||||||||||||| ||||||||||||||||| |||||| || ||||||||||||||| ||||| || ||||||    
T  54387806 aaggcttaccacgtcaaatgccacgcaagcagggactaaactgattgatttacagaaaattgcc-aaggaccaaattgattgattttcagaaaatt 54387712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 42982463 - 42982315
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| || | | ||||  ||||||||    
T  42982463 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttgaccttttacaagccttaccac 42982364  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatt 161  Q
    || ||||| ||| ||||||||||||||| ||||||||||| | ||||||    
T  42982363 gtcagatgccacacaagcagggaccaaattgattgatttagagaaaatt 42982315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 11254197 - 11254344
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| | ||| |||| |||||||||    
T  11254197 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgatgtgtaacgttatc-tcttacaaggcttaccac 11254295  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatt 161  Q
    || ||||| || |||||||||||||||| |||| ||||| || ||||||    
T  11254296 gtcagatgccatgcaagcagggaccaaattgatggattttcataaaatt 11254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 4172299 - 4172391
Alignment:
Q  122 cacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  4172299 cacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaattttcaaggaccaaattgatg 4172391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 20820060 - 20820137
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaac 87  Q
    ||||||||||||||| |||||||| |||||||||||| | ||||||||||||| || ||||| |||||||||| ||||    
T  20820060 ttagtccctgaattttcaaaatgtcaatcaaatcagttcatccgttaagttggcctgttaacagaggtgacgtttaac 20820137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 41759492 - 41759557
Alignment:
Q  21 atttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaa 86  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| | ||| ||||||||||||||    
T  41759492 atttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgtcaacagaggtgacgtgtaa 41759557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2691439 - 2691530
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaa 92  Q
    |||||| | |||||||||||||||  ||||||| |||||||||||||  ||||||||||||| || |||| |||||||| ||| | ||||||    
T  2691439 aatatctatttagtccctgaatttttaaaatgtcaatcaaatcagtcaatccgttaagttggcctgttaagggaggtgatgtgcatcgttaa 2691530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 43520966 - 43520904
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  43520966 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcataaaatt 43520904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 320757 - 320695
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  320757 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 320695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 833455 - 833517
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  833455 ggactaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 834899 - 834837
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  834899 ggactaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 5438043 - 5438105
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  5438043 ggactaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 5438105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 33264615 - 33264677
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  33264615 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 33264677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 33265867 - 33265805
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  33265867 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 33265805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 43507399 - 43507461
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  43507399 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 43507461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 43508510 - 43508448
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  43508510 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 43508448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 51013777 - 51013730
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||    
T  51013777 ggaccaaactgattaatttacacaaaatttccaaggaccaaattgatg 51013730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 4173597 - 4173545
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  4173597 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattt 4173545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 4172344 - 4172406
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||| ||| ||||||||||||||||||| || ||||||    
T  4172344 ggacgaaattgatggatttacacaaaattttcaa-ggaccaaattgatggattttcagaaaatt 4172406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 5439504 - 5439442
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||| ||||||||||||||| || ||||||    
T  5439504 ggactaaattgatggatttacacaaaatttccaa-ggatcaaattgatggattttcagaaaatt 5439442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 20494025 - 20494072
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  20494025 ggaccaaattgattgatttacataaaattggcaaggaccaaattgatg 20494072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 26397922 - 26397819
Alignment:
Q  28 aaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgca 127  Q
    |||||| |||||||| |||| ||||||||||||||  ||||||||| | ||||||||   |||||| ||| |||| ||||  || || ||||||||| ||    
T  26397922 aaatgtcaatcaaattagtctctccgttaagttgggatattaacggtgatgacgtgttctgttaacctctcacaaggcttgtcatgtcagatgtcacaca 26397823  T
Q  128 agca 131  Q
    ||||    
T  26397822 agca 26397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 35401947 - 35401994
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||| ||||||||||||    
T  35401947 ggaccaaattgattgatttacagaaaattgccaagcaccaaattgatg 35401994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 49524624 - 49524577
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  49524624 ggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 49524577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 319520 - 319567
Alignment:
Q  148 atttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||||||||||||||||| |||||||||||||| |||| || ||||||    
T  319520 atttacacaaaatttccaa-ggaccaaattgatgaattttcagaaaatt 319567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 11641949 - 11641901
Alignment:
Q  166 aaggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    ||||| ||||||||| |||||||| ||||||  ||||||||||||||||    
T  11641949 aaggatcaaattgattgatttacagaaaattgtcaaggaccaaattgat 11641901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 17577958 - 17577745
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| ||| ||    
T  17577958 aatatcaaattagttcatgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtctgttaacggagctgacgtgtaacgttaacctctaac 17577859  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17577858 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 17577760  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  17577759 aggaccaaattgatg 17577745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21843015 - 21842802
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | | |||||||||||||||||| |||||||| ||||||    
T  21843015 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttttttttttaacggaggtgacgtgttacgttaacctctgac 21842916  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||| ||    
T  21842915 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttc-aatgaccaaattgatggatttacacaaaattttca 21842817  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  21842816 aggaccaaattgatg 21842802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 40782234 - 40782022
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||| |||||||| ||||||    
T  40782234 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgac 40782135  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||    
T  40782134 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaa-ttcca 40782037  T
Q  201 aggaccaaattgatg 215  Q
    |||| ||||||||||    
T  40782036 aggatcaaattgatg 40782022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29620204 - 29620416
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||| |||||||| ||||||    
T  29620204 aatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgac 29620303  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| |||||    
T  29620304 aaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattt-tgaaggacgaaattgatggatttacacaaaa-ttcca 29620401  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  29620402 aggaccaaattgatg 29620416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7269469 - 7269275
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  7269469 aatatcaaattagtccctgaatttataaaatgttaatcaaatcagtcagtccgttaagttgatctgttaacggaggtgacgtgtaacgttaacctctgac 7269370  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  7269369 aaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 7269275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 28813788 - 28813594
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||| ||    
T  28813788 aatatctatttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaaattggtgtgttaacggaggtgacgtgtaacgttaacctcttac 28813689  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| || |||||||||||||||| |||| || ||||||    
T  28813688 aaggcttaccacgttagatgtcacgcaagcagcgaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatgaattttcagaaaatt 28813594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 2852952 - 2853110
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  2852952 aatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 2853051  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaa 159  Q
    |||||||||||| | ||||| |||||||||||| ||||||||||||||||||| |||||    
T  2853052 aaagcttaccacttcagatgccacgcaagcaggaaccaaactgattgatttacgcaaaa 2853110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 12738759 - 12738560
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||    
T  12738759 aatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttac 12738660  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |   |||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||| || |||||| |||    
T  12738659 atgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattgcc-aaggaccaaattgatggattttcagaaaattgcca 12738561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 12801582 - 12801383
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||    
T  12801582 aatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttac 12801483  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |   |||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||| || |||||| |||    
T  12801482 atgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattgcc-aaggaccaaattgatggattttcagaaaattgcca 12801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 30463966 - 30464165
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||| ||| ||    
T  30463966 aatatctatttagtccctgaatttacaaaatatcaatcaaatcagtccctctgttaagttggtctgtttacggaggtgacgtgtaacgttaacctcttac 30464065  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || |||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||  | ||||||||||||||||||||| || |||||| |||    
T  30464066 aaggcttaccatgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggaccaaattgatggattttcagaaaattgcca 30464164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 42471614 - 42471808
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| |||| | |||||||||||||||| |||||||| |||||||| ||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  42471614 aatatcaaaatagtacatgaatttacaaaatgtcaatcaaattagtccctctgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 42471713  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||| |||||||| ||||| ||||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  42471714 aaagcgtaccacgtcagatgccacgcaagcagggactaaattgatggatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 42471808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 8541294 - 8541129
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||    
T  8541294 aatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctcttac 8541195  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaa 166  Q
    || ||||||||||| |||||||| |||||||||||||||| ||||||||||||| |||||| ||||    
T  8541194 aaggcttaccacgtcagatgtcatgcaagcagggaccaaattgattgatttacagaaaattgccaa 8541129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 28822101 - 28821920
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||| ||||||||     
T  28822101 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccat 28822002  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||| || |||||||||||||||| ||||||||||||| |||||| ||||  |  ||||||||||||||| || ||||||    
T  28822001 gtcagatgccaagcaagcagggaccaaattgattgatttacagaaaattgccaa--ggtcaaattgatggattttcagaaaatt 28821920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 32134297 - 32134501
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctc-----cgttaagttggtctattaacggaggtgacgtgtaacgttaacat 95  Q
    |||||| | |||||||||||||||| ||||||| |||||||||||||  ||      ||||||||||||| ||||||||||||||||||||||||||| |    
T  32134297 aatatctatttagtccctgaatttataaaatgtcaatcaaatcagtctatctgttaagttaagttggtctgttaacggaggtgacgtgtaacgttaacct 32134396  T
Q  96 ctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaat 195  Q
    || |||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || |||||||||||||||| |||| || |||||    
T  32134397 cttacaaagcttatcacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatgaattttcataaaat 32134495  T
Q  196 ttccaa 201  Q
    | ||||    
T  32134496 tgccaa 32134501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 34328838 - 34328647
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaa----agctta 108  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||    ||||||    
T  34328838 gtccttgaatttacaaaatgtcaatcaaatcagtcgctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggctagctta 34328739  T
Q  109 ccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggacc-aaattgatggatttacacaaaatttccaa 201  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||| | ||| ||||  ||||||| |||||||||||||| || |||||| ||||    
T  34328738 ccacgtcagatgccacgcaagcagggaccaaattgattgatttagagaaattttc--aaggaccaaaattgatggattttcagaaaattgccaa 34328647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 24539933 - 24540041
Alignment:
Q  106 ttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggac 205  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaa-ggaccaaattgatggatttacacaaaatttccaaggac 24540031  T
Q  206 caaattgatg 215  Q
    ||||||||||    
T  24540032 caaattgatg 24540041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 41493910 - 41494045
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||| ||||| | |||||||| ||||||||| |||| ||||||||||||| || ||||||||| ||||||||| |||||||  || ||    
T  41493910 aatatctatttagtccatgaatattcaaaatgtcaatcaaatccgtccatccgttaagttggcctgttaacggagatgacgtgtaccgttaactgcttac 41494009  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggac 136  Q
    || ||| ||||| | ||||||||| |||||| ||||    
T  41494010 aaggctcaccacatcagatgtcacacaagcatggac 41494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 27077477 - 27077371
Alignment:
Q  14 tccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacg 113  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||  | |||| ||||||||||||||  |||||| ||| |||| |||| ||| |    
T  27077477 tccctgaatttaccaaatgtcaatcaaatcggtccctccgttaagttggcatgttaatggaggtgacgtgtactgttaacctctcacaaggcttgccatg 27077378  T
Q  114 ttagatg 120  Q
    | |||||    
T  27077377 tcagatg 27077371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 42471746 - 42471793
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  42471746 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 42471793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 7269337 - 7269290
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  7269337 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 7269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 17577792 - 17577730
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  17577792 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcataaaatt 17577730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 24539994 - 24540056
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  24539994 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 24540056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 2181591 - 2181520
Alignment:
Q  129 gcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    |||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||| || |||||| ||||    
T  2181591 gcagggaccaaattgattaatttacagaaaattgccaa-ggaccaaattgatggattttcagaaaattgccaa 2181520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 32134434 - 32134482
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatga 216  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  32134434 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 32134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 12738627 - 12738580
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  12738627 ggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 12738580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 12801450 - 12801403
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  12801450 ggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 12801403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 28813655 - 28813608
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatga 216  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||    
T  28813655 gaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 28813608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 21842848 - 21842797
Alignment:
Q  134 gaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    ||||||| |||| |||||||||||||||| ||| |||||||||||||||||||    
T  21842848 gaccaaattgatggatttacacaaaattttcaa-ggaccaaattgatggattt 21842797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 2181587 - 2181540
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||||||||  ||||||| |||||| ||||||||||||||||||    
T  2181587 ggaccaaattgattaatttacagaaaattgccaaggaccaaattgatg 2181540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 30464098 - 30464145
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  30464098 ggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 30464145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 19998438 - 19998381
Alignment:
Q  28 aaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgta 85  Q
    |||| ||||||||||| ||||||||||||||||||  | || |||||||||| |||||    
T  19998438 aaatataaatcaaatcggtccctccgttaagttggcatgttgacggaggtgatgtgta 19998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40780616 - 40780669
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 54  Q
    ||||||||||||||||||||||||   ||| ||  |||||||||||||||||||    
T  40780616 aatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgt 40780669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 29620370 - 29620431
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  29620370 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcagaaaatt 29620431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 46308873 - 46309086
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||    
T  46308873 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgac 46308972  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  46308973 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 46309071  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  46309072 aggaccaaattgatg 46309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 46310459 - 46310246
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  46310459 aatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 46310360  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  46310359 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 46310261  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  46310260 aggaccaaattgatg 46310246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 53092689 - 53092902
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  53092689 aatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 53092788  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  53092789 aaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aatgaccaaattgatggatttacacaaaatttcca 53092887  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  53092888 aggaccaaattgatg 53092902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 3150318 - 3150531
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||    
T  3150318 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctctgac 3150417  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||| ||||||||| ||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3150418 aaagattaccacgtcagatgccacgcaagcggagaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 3150516  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  3150517 aggaccaaattgatg 3150531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 38193533 - 38193320
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||| |||||||| ||||||    
T  38193533 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgac 38193434  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  38193433 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 38193335  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  38193334 aggaccaaattgatg 38193320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 46609215 - 46609428
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | |||| ||||||||||||| |||||||| ||||||    
T  46609215 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctacgttaagttggtttgttaatggaggtgacgtgtcacgttaacctctgac 46609314  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  46609315 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 46609413  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  46609414 aggaccaaattgatg 46609428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 53094296 - 53094083
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  53094296 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatgagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 53094197  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  53094196 aaagcttaccacgtcagatgtcacgcaagcagtgaccaaactgattgattcacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 53094098  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  53094097 aggaccaaattgatg 53094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 53187808 - 53188021
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||    
T  53187808 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgatctggtaacggaggtgacgtgtaacgttaacctctgac 53187907  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||| ||||||||| ||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53187908 aaagattaccacgtcagatgccacgcaagcggagaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 53188006  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  53188007 aggaccaaattgatg 53188021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2661931 - 2661718
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  2661931 aatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacagaggtgacgtgtaacgttaacctctgac 2661832  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| | ||| || |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2661831 aaagcttaccacgtcatatgccatgcaagcagggaccaaactaattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcca 2661733  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  2661732 aggaccaaattgatg 2661718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 44795913 - 44795700
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||||| |||||||||||||| | || |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  44795913 aatatcaaattagtccatgaatttacaaaatatcaaacaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaacctctgac 44795814  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  44795813 aaagcttaccacgtaagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcc-aaggaccaaattgatgaatttacacaaaatttcca 44795715  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  44795714 aggaccaaattgatg 44795700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 46611326 - 46611113
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||    
T  46611326 aatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgac 46611227  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| || ||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| ||    
T  46611226 aaagcttaccacgtcagatgccatgcaagcaaggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaattttca 46611128  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  46611127 aggaccaaattgatg 46611113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 7883394 - 7883588
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  7883394 aatatcaaattagttcctgaatttacaaaatttcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 7883493  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  7883494 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcaaaaaatt 7883588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 28626477 - 28626690
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  28626477 aatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 28626576  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| |||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  28626577 aaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaattt-cgaaggactaaattgatggatttacacaaaatttcca 28626675  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  28626676 aggaccaaattgatg 28626690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 35903891 - 35904085
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  35903891 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 35903990  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  35903991 aaagcttaccacatcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggattttcagaaaatt 35904085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 41979375 - 41979181
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  41979375 aatatcaaattagtccctgaatttacaaaatttcaatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgac 41979276  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| || ||||||    
T  41979275 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttc-gaggaccaaattgatggattttcagaaaatt 41979181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 54900097 - 54899913
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  54900097 aatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacgtctgac 54899998  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  54899997 aaagcttaccacgtcaaatgccacgcaagcagagaccaaactgattgatttacacaaaattttc-aaggaccaaattgatggattt 54899913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 38191961 - 38192162
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||    
T  38191961 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgac 38192060  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||            ||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||| ||||||||||    
T  38192061 aaagcttac------------cacgcaagcagtgaccaaactgattgatttacacaaaattt-cgaaggacgaaattaatggatttacataaaatttcca 38192147  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  38192148 aggaccaaattgatg 38192162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 214
Target Start/End: Complemental strand, 611236 - 611033
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| | ||||    
T  611236 ttagcccctgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttac 611137  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaa 209  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||| |||||| || |||||| |||||||||||||| || ||||||  |||||||||||    
T  611136 cacgttagatgccacgcaagcagggatcaaattgattgatttacagaaaattgcc-aaggactaaattgatggattttcagaaaattgtcaaggaccaaa 611038  T
Q  210 ttgat 214  Q
    |||||    
T  611037 ttgat 611033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 17516984 - 17516797
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  17516984 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacctcttacaaggcttaccac 17516885  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || ||||| ||||||||||||||||||| ||||||||||||| ||||||  | ||||||||||||||||||||| || |||||| ||||    
T  17516884 gtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggaccaaattgatggattttcagaaaattgccaa 17516797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 2378997 - 2378807
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| ||| |||||||    
T  2378997 ttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaatgttaacatcttacatagcttac 2378898  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| | |||||| || || |||||||||||||||||| || |||||| ||||    
T  2378897 cacgtcagatgtcacgcaagcagggaccaaattgattgatttaaagaaaattgcc-aatgaccaaattgatggattttcagaaaattgccaa 2378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 54412561 - 54412376
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||| |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| | | |||| ||||||    
T  54412561 ttagttcctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaaccttttacaatgcttac 54412462  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||| || ||||||    
T  54412461 cacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggattttcataaaatt 54412376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 21350616 - 21350429
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||| |||| |||||||||    
T  21350616 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaacgttaacctcttacaaggcttaccac 21350517  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || ||||||||||||||||||||||||| ||||||||||||| |||||| || ||| |||||||||||| |||| || |||||| ||||    
T  21350516 gtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgcc-aagaaccaaattgatgaattttcagaaaattgccaa 21350429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 214
Target Start/End: Complemental strand, 51686408 - 51686205
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||  |||||||||||||||  |||||||||||||||| || |||||||| | |||||| |||||||||||| ||||||| ||| |||||||||||    
T  51686408 ttagtcctcgaatttacaaaatgttcatcaaatcagtccctctgtcaagttggtatgttaacgaaggtgacgtgtaccgttaacctcttacaaagcttac 51686309  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaa 209  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||| ||||| || |||||| ||||||| ||||    
T  51686308 cacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatcgattttcagaaaattgccaaggaacaaa 51686210  T
Q  210 ttgat 214  Q
    |||||    
T  51686209 ttgat 51686205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 46114128 - 46113916
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||  |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||    
T  46114128 aatatctatttagtcattgaatttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttac 46114029  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || | |||||| || ||||| ||||||||||| ||||||| ||||||||||||| ||||||  | |||||| |||||||||||||| || || ||| |||    
T  46114028 aaggtttaccatgtcagatgccacgcaagcagagaccaaattgattgatttacagaaaattgtc-aaggactaaattgatggattttcagaatattgcca 46113930  T
Q  201 aggaccaaattgat 214  Q
    ||||||||||||||    
T  46113929 aggaccaaattgat 46113916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 23291636 - 23291834
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| ||| | ||||||||||||||||||||| ||| ||    
T  23291636 aatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttagtctgtta-cagaggtgacgtgtaacgttaacctcttac 23291734  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||  |  |||||||||||||||||||| || |||||| |||    
T  23291735 aaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattaatttacagaaaattgtc-gaggaccaaattgatggattttcagaaaattgcca 23291833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 27897225 - 27897399
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||| ||||||||||||||| | |||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||| ||| |||  ||||||    
T  27897225 ttagtctctgaatttacaaaatatcaatcaaattagtccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttac 27897324  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatt 185  Q
    ||||| |||||||||||||| |||||||||| ||||||||||||| |||||| || ||||||||||||||||||||    
T  27897325 cacgtcagatgtcacgcaagtagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggatt 27897399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 43767058 - 43766891
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||| ||| | || |||||||||    
T  43767058 gtccttgaatttacaaaatgtcaatcaaatcagtcactccgttacgttggtctgttaacggaggtgatgtgtaacgttaacctcttataaggcttaccac 43766959  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatg 181  Q
    || | ||||||||||||||||||||||| ||||||||||||  ||||||  | ||||||||||||||||    
T  43766958 gtcaaatgtcacgcaagcagggaccaaattgattgatttacggaaaattgtc-aaggaccaaattgatg 43766891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 42282496 - 42282318
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||| ||||||||||||||||  || ||||||||||||||||||||||||| | ||||| |||||||| |||| ||||||| ||| ||    
T  42282496 aatatctatttagtccttgaatttacaaaatgttcattaaatcagtccctccgttaagttggtatgttaaccgaggtgacatgtaccgttaacctcttac 42282397  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgat 180  Q
    || | ||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || |||||||||||||||    
T  42282396 aaggtttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgat 42282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 44268059 - 44268228
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||  |||| | |||||||    
T  44268059 gtccttgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcctacaaggtttaccac 44268158  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatgga 183  Q
    || || || |||| |||||||||||||| || |||||||||| |||||| || ||||||||||||||||||    
T  44268159 gtcagttgccacgtaagcagggaccaaattggttgatttacagaaaattgcc-aaggaccaaattgatgga 44268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 30598415 - 30598602
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||  ||| |||| |||| ||||    
T  30598415 gtccttgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaaactcttacaaggcttgccac 30598514  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || ||||  ||||||||||| |||||||  |||||||||||| ||||||  | || |||||||||||||||||| || |||||| ||||    
T  30598515 gtcagataccacgcaagcagagaccaaatagattgatttacagaaaattgtc-aatgaccaaattgatggattttcagaaaattgccaa 30598602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 48829442 - 48829634
Alignment:
Q  21 atttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatg 120  Q
    |||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||| |||||  |||||| ||| |||| ||||||||||| ||| |    
T  48829442 atttacaaaatgtccatcaaatcagtccctcggttaagttggtctgttaacggaggtgaagtgtactgttaacctcttacaaggcttaccacgtcagagg 48829541  T
Q  121 tcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    ||||||||||| |||||||| ||||||||||||| ||||||  | ||||||||||||||  |||||  | ||||||  |||||| |||||||||    
T  48829542 tcacgcaagcaaggaccaaattgattgatttacagaaaattgtc-aaggaccaaattgaatgatttttagaaaattgtcaaggaacaaattgat 48829634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 2661765 - 2661703
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  2661765 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 2661703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 3150484 - 3150546
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  3150484 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 3150546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 7883526 - 7883573
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  7883526 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 7883573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 35904023 - 35904070
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  35904023 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 35904070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 53187974 - 53188036
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  53187974 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 53188036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 53092856 - 53092917
Alignment:
Q  134 gaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  53092856 gaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 53092917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 44795777 - 44795733
Alignment:
Q  172 caaattgatggatttacacaaaatttccaaggaccaaattgatga 216  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  44795777 caaactgattgatttacacaaaatttccaaggaccaaattgatga 44795733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 27897348 - 27897395
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  27897348 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 27897395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 28626643 - 28626705
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  28626643 ggactaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 28626705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 38193367 - 38193305
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  38193367 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 38193305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 44795747 - 44795685
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  44795747 ggaccaaattgatgaatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 44795685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 46310293 - 46310231
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  46310293 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 46310231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 46609381 - 46609443
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  46609381 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 46609443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 53094130 - 53094068
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  53094130 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 53094068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 54412438 - 54412391
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  54412438 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 54412391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 42282364 - 42282318
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  42282364 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 42282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 54899964 - 54899918
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||||    
T  54899964 gaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 54899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 46309039 - 46309091
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  46309039 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattt 46309091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 21350496 - 21350448
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatga 216  Q
    ||||||||||||| |||||||| |||||| ||||| |||||||||||||    
T  21350496 ggaccaaattgattgatttacagaaaattgccaagaaccaaattgatga 21350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 17516864 - 17516817
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  17516864 ggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 17516817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 41979243 - 41979196
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| |||||||||||||||| | |||||||||||||||    
T  41979243 ggaccaaactgattgatttacacaaaattttcgaggaccaaattgatg 41979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 44268179 - 44268226
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||    
T  44268179 ggaccaaattggttgatttacagaaaattgccaaggaccaaattgatg 44268226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 24846548 - 24846491
Alignment:
Q  21 atttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtga 79  Q
    |||| |||||||| ||| ||||||||||||||||||||||||  | |||||||||||||    
T  24846548 attttcaaaatgtcaattaaatcagtccctccgttaagttgg-atgttaacggaggtga 24846491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 38192129 - 38192177
Alignment:
Q  147 gatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| ||||||||||| ||||||||||||||||||| || ||||||    
T  38192129 gatttacataaaatttccaa-ggaccaaattgatggattttcagaaaatt 38192177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 43766938 - 43766889
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatgat 217  Q
    ||||||||||||| |||||||  ||||||  |||||||||||||||||||    
T  43766938 ggaccaaattgattgatttacggaaaattgtcaaggaccaaattgatgat 43766889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 46611160 - 46611108
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggattt 186  Q
    |||| ||| |||| |||||||||||||||| ||| |||||||||||||||||||    
T  46611160 ggacgaaattgatggatttacacaaaattttcaa-ggaccaaattgatggattt 46611108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16764634 - 16764422
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  16764634 aatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttg-tctgttaacggaggtgacgtgtaacgttaacctctgac 16764536  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  16764535 aaagcttaccatgtcagatgtcacgcaagcagagaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttcta 16764437  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  16764436 aggaccaaattgatg 16764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 24205664 - 24205877
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||||    
T  24205664 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttcagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 24205763  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  24205764 aaagcttaccacgtcagatgccatgcaagcagggaccaaactgattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 24205862  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  24205863 aggaccaaattgatg 24205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2577503 - 2577291
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| ||||| |||||||||||| |||||||| ||||||    
T  2577503 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacagaggtgacgtgtcacgttaacctctgac 2577404  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||    
T  2577403 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactaattgatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaa-ttcca 2577306  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  2577305 aggaccaaattgatg 2577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14387415 - 14387628
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || | || |||| | |||||||||||||||||||| ||||||    
T  14387415 aatatcaaattagtccctgaatttacaaaatgtcaatcaaataagtccctccgttaaattagactgttaaagaaggtgacgtgtaacgttaacctctgac 14387514  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  14387515 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttaggcaaaatttcca 14387613  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  14387614 aggaccaaattgatg 14387628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 6783430 - 6783634
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  6783430 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattattccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgac 6783529  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||    
T  6783530 aaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacac----------aaggacgaaattgatggatttacacaaaatttcca 6783619  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  6783620 aggaccaaattgatg 6783634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 37022208 - 37021996
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||| ||||||||| |||||||| ||||||    
T  37022208 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaagtgacgtgtcacgttaacctctgac 37022109  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| |||||    
T  37022108 aaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattt-tgaaggacgaaattgatggatttacacaaaa-ttcca 37022011  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  37022010 aggaccaaattgatg 37021996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 40561901 - 40561707
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  40561901 aatagcaaattagtccctgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgac 40561802  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| || ||||||    
T  40561801 aaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacacaacatttcc-aaggaccaaattgatggattttcagaaaatt 40561707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 39663229 - 39663417
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||  ||||||    
T  39663229 ttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttac 39663328  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||| ||   || | ||||||||||||||||||||| || |||||| ||||    
T  39663329 cacgtcagatgtcacgcaagcagggatcaaattgattgatttacataa---ttgccaaggaccaaattgatggattttcataaaattgccaa 39663417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 19906748 - 19906942
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||    
T  19906748 aatatctatttagtcccataatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttac 19906847  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |  ||||||||||| ||||| ||||||| ||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||| || ||||||    
T  19906848 atggcttaccacgtcagatgccacgcaaacagggaccaaattgattgatttacataaaattgcc-aaggaccaaattgatggattttcagaaaatt 19906942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 16376811 - 16376996
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||| ||| |||| ||||||    
T  16376811 ttagtccctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtctattaacagaggtaacatttaacgttaacctcttacaaggcttac 16376910  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    ||||| | ||||||||||||||||||||||| ||||||||||||| ||||||  | ||||||||||||||||||||| || ||||||    
T  16376911 cacgtcatatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggaccaaattgatggattttcagaaaatt 16376996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 42517635 - 42517822
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||  |||| |||||||||    
T  42517635 gtccttgaatttacaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcatacaaggcttaccac 42517734  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || ||||| ||||||||||||||||||| ||||||||||||| ||||||  | ||||| ||||||||||||||| || |||||| ||||    
T  42517735 gtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggagcaaattgatggattttcagaaaattgccaa 42517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 39456794 - 39456604
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||| |||| ||||||    
T  39456794 ttagtccctgaatttataaaatgtcaatcaaatcagtccatccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttac 39456695  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| | ||||||||||||||||||||||| ||||||||||| | ||||||  | |||||| |||||||||||||| || |||||| ||||    
T  39456694 cacgtcatatgtcacgcaagcagggaccaaattgattgatttatagaaaattgtc-aaggactaaattgatggattttcagaaaattgccaa 39456604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 17698120 - 17697938
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||  ||| | ||  ||||||||    
T  17698120 gtccttgaatttacaaaatgtcaatcaaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaatctcttaaaagacttaccac 17698021  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||||||||||||||||||||||| | |||  |||||  ||||||  | ||||||||||||||||||||| || ||||||    
T  17698020 gttagatgtcacgcaagcagggaccaaattaattagtttactgaaaattgtc-aaggaccaaattgatggattttcagaaaatt 17697938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 19581480 - 19581689
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||  |||||||| ||||||  ||||||||||||  ||||||||||| || | |||||||||||||| ||||   ||||| ||| ||    
T  19581480 aatatctatttagtcctcgaatttaccaaatgtccatcaaatcagtctttccgttaagtttgtatgttaacggaggtgacatgtactattaacttcttac 19581579  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||| ||||| || |||||| |||    
T  19581580 aaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgattgattttcagaaaattgcca 19581678  T
Q  201 aggaccaaatt 211  Q
    |||||||||||    
T  19581679 aggaccaaatt 19581689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 6799396 - 6799236
Alignment:
Q  35 aatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcaggg 134  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||||||  ||||| |||||||| ||||    
T  6799396 aatcaaatcagtccctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggcttaccacgccagatgccacgcaagtaggg 6799297  T
Q  135 accaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||  ||||||||||| | |||||| || ||||||||||||||||||||| || ||||||    
T  6799296 accaagttgattgatttagagaaaattgcc-aaggaccaaattgatggattttcaaaaaatt 6799236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 37646501 - 37646366
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||||||||||| |||||||  ||||||||||||||||| |||||||||| || |||||||| ||||| ||||  ||||||  || ||    
T  37646501 aatatctatttagtccctgaattttcaaaatgccaatcaaatcagtccctctgttaagttggcctgttaacggacgtgacatgtactgttaaccgcttac 37646402  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggac 136  Q
    || ||||||||||| |||||||||||||||||||||    
T  37646401 aaggcttaccacgtcagatgtcacgcaagcagggac 37646366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 34400392 - 34400568
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||  ||||| ||| || ||| ||||  ||||||||    
T  34400392 gtccttgaatttacaaaatatcaatcaaatcggtccctccgttaagttggtctgttaacggaggtgatatgtaatgttgacctcttacaagacttaccac 34400491  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || |||||||||||       ||||||| ||||||||||||| |||| |  | ||||||||||||||||| ||| || ||||||    
T  34400492 gtcagatgtcacgc------cgaccaaattgattgatttacagaaaaatgtc-aaggaccaaattgatggtttttcagaaaatt 34400568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 162098 - 161967
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||| | ||||||| ||||| || |||||||||  ||| ||||||||||||||||||||||||||||||| |||| |||||||  || ||    
T  162098 aatatctatttagttcttgaattttcaaaacgtcaatcaaatcgatccatccgttaagttggtctattaacggaggtgacatgtaccgttaaccgcttac 161999  T
Q  101 aaagcttaccacgttagatgtcacgcaagcag 132  Q
    ||  |||||||||| |||||||||||||||||    
T  161998 aagacttaccacgtcagatgtcacgcaagcag 161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 31475103 - 31474972
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaa-tgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctga 99  Q
    |||||| | ||| ||||||||||| ||||| ||| ||||||||| ||||||| |||||||||   | |||||||||||||||||||  ||||||  || |    
T  31475103 aatatctatttaatccctgaattttcaaaaatgtcaatcaaatcggtccctctgttaagttgacatgttaacggaggtgacgtgtactgttaaccgctta 31475004  T
Q  100 caaagcttaccacgttagatgtcacgcaagca 131  Q
    ||| ||||||||||| ||||||||||||||||    
T  31475003 caatgcttaccacgtcagatgtcacgcaagca 31474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 40561769 - 40561722
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40561769 ggaccaaattgattgatttacacaacatttccaaggaccaaattgatg 40561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 6783587 - 6783649
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  6783587 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 6783649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 16764469 - 16764407
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| ||||||||||||||||| || ||||||||||||||||||| || ||||||    
T  16764469 ggaccaaattgatggatttacacaaaatttctaa-ggaccaaattgatggattttcagaaaatt 16764407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 19906880 - 19906927
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  19906880 ggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 19906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 19581612 - 19581658
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  19581612 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 19581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 24205830 - 24205891
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaat 195  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || |||||    
T  24205830 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaat 24205891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 37022042 - 37021981
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| |||||||||    
T  37022042 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcacaaaatt 37021981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 14387581 - 14387643
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| ||||||  |||||||||||| ||||||||||||||||||| || ||||||    
T  14387581 ggaccaaattgatggatttaggcaaaatttccaa-ggaccaaattgatggattttcagaaaatt 14387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 16376934 - 16376981
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  16376934 ggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 16376981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 2577337 - 2577276
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  2577337 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcagaaaatt 2577276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 29994955 - 29995156
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  29994955 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccac 29995054  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattg 212  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29995055 gtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttccaaggaccaaattg 29995153  T
Q  213 atg 215  Q
    |||    
T  29995154 atg 29995156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 35403642 - 35403429
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||| ||||||    
T  35403642 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtatgttaacggaggtgacgtgtcacgttaacctctgac 35403543  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  35403542 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattggtttacacaaaattt-cgaaggacgaaattgatggatttacacaaaatttcca 35403444  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  35403443 aggaccaaattgatg 35403429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 20479742 - 20479530
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||| |||||||| ||||||    
T  20479742 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgac 20479643  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| |||||    
T  20479642 aaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattt-tgaaggacgaaattgatggatttacacaaaa-ttcca 20479545  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  20479544 aggaccaaattgatg 20479530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 35402035 - 35402248
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  35402035 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 35402134  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||| ||||| ||||| || | |||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||||||| ||    
T  35402135 aaagcttatcacgtcagatgccatgtaagcagggaccaaactgattaatttacacaaaattt-cgaaggacgaaattgatggatttacacaaaattttca 35402233  T
Q  201 aggaccaaattgatg 215  Q
    ||||| |||||||||    
T  35402234 aggactaaattgatg 35402248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 27664496 - 27664657
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  27664496 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctctgac 27664595  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaattt 162  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  27664596 aaagcttaccacgtcagatgccacgcaagcagggaccaaactgattaatttactcaaaattt 27664657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 13169706 - 13169507
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||    
T  13169706 aatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttac 13169607  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || || |||||||||| ||||||| || |||||| |||    
T  13169606 atggcttaccacgttagatgtcacgcaagcagggaccaaattgattgatttacataaaattgcc-aatgaccaaattggtggattttcagaaaattgcca 13169508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 47384360 - 47384567
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||| ||    
T  47384360 aatatctaattagtccccgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacatgtaacgttaacctcttac 47384459  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||  | ||||||||||||||| ||||| || |||||| |||    
T  47384460 aaggcttaccacgtcagatgtcacgcaagcagtgaccaaattgattgatttacataaaattgtc-aaggaccaaattgattgattttcagaaaattgcca 47384558  T
Q  201 aggaccaaa 209  Q
    |||||||||    
T  47384559 aggaccaaa 47384567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 78037 - 77854
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||| |  |||    
T  78037 aatatcaaatttgtccctgaatttacaaaatgccaatcaaatcagtccctccgttaagttggtctgttaacagaggttacatgtaacgttaaccttcgac 77938  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatt 185  Q
    ||||||||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  77937 aaagcttaccatgtcagatttcatgcaagcagggaccaaactgattgatttacacaaaatttcc-aaggaccaaattgatggatt 77854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 39857711 - 39857910
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||    
T  39857711 aatatctatttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttac 39857810  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |  ||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||| || |||||| |||    
T  39857811 atggcttaccacgtcagatgtcacgcaaacagggaccaaattgattgatttacataaaattgcc-aaggaccaaattgatggattttcagaaaattgcca 39857909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 37114007 - 37114206
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| ||    
T  37114007 aatatctatttagtccctaaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttac 37114106  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| || || || ||||||||||||||| || |||||| |||    
T  37114107 aaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgcc-aatgatcaaattgatggattttcagaaaattgcca 37114205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 24226659 - 24226846
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||| |||||||||    
T  24226659 gtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttgacctcttacaaggcttaccac 24226758  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || |||| |||| ||||||||||||||| ||||||||||| | ||||||  | ||||||||||||||||||||| || |||||| ||||    
T  24226759 gtcagatatcacacaagcagggaccaaattgattgatttagagaaaattgtc-aaggaccaaattgatggattttcagaaaattgccaa 24226846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 35691505 - 35691692
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| |||||||||||||||| |  ||| ||||||| |||||||||||| |||||||||||||| ||| |||| |||||||||    
T  35691505 gtccttgaatttacaaaatgtcaatcaaatcagtcccttcactaaattggtctgttaacggaggtggcgtgtaacgttaacctcttacaaggcttaccac 35691604  T
Q  113 gttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    || ||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||| || |||||| ||||    
T  35691605 gtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggattttcagaaaattgccaa 35691692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 6605411 - 6605221
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||| |||| ||||||    
T  6605411 ttagtccctgaatttacaaaatgccaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctcttacaaggcttac 6605312  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| ||||| ||| ||||||||||| ||| ||||||||||||| ||||||  | ||||||||||||||||||||| || |||||| ||||    
T  6605311 cacgtcagatgccacacaagcagggactaaattgattgatttacagaaaattgtc-aaggaccaaattgatggattttcagaaaattgccaa 6605221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 34775073 - 34775263
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||   |||||    
T  34775073 ttagtccctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacatgacttac 34775172  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||  | |||||| |||||||||||||| || |||||| ||||    
T  34775173 cacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtc-aaggactaaattgatggattttcataaaattgccaa 34775263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 45361290 - 45361091
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||  ||||||    
T  45361290 ttagtccttgaacttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttac 45361191  T
Q  110 cacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcca--------aaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||| ||||||||||||||||||||||||| ||||  |||| || |||||| |||        ||||||||||||||||||||| || |||||| ||||    
T  45361190 cacgtcagatgtcacgcaagcagggaccaaattgatgtattttcataaaattgccaacgttgccaaggaccaaattgatggattttcagaaaattgccaa 45361091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 48227952 - 48227820
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||| |||| |||||||||    
T  48227952 gtccctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaatgcttaccac 48227853  T
Q  113 gttagatgtcacgcaagcagggaccaaactgat 145  Q
    || ||||| ||||||||||||||||||| ||||    
T  48227852 gtcagatgccacgcaagcagggaccaaattgat 48227820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 46437185 - 46437305
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 112  Q
    |||| |||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  46437185 gtccttgaatttacaaaatgtcaaccaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttaccac 46437284  T
Q  113 gttagatgtcacgcaagcagg 133  Q
    || ||||| |||||| |||||    
T  46437285 gtcagatgccacgcaggcagg 46437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 22211773 - 22211597
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccg-ttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttacca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||| |||| |||         
T  22211773 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggct----- 22211679  T
Q  112 cgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
           || ||||||||||||||||||| | ||||||||||| |||||| || ||||||||||||||||||||| || |||||| ||||    
T  22211678 -------tgccacgcaagcagggaccaaattaattgatttacagaaaattgcc-aaggaccaaattgatggattttcagaaaattgccaa 22211597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 37791720 - 37791914
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||||| | ||||||||| |||||  ||||||| |||||||||| ||| ||| |||||||||  | ||||||||||||||||||| |||||||  || ||    
T  37791720 aatatctatttagtccctaaatttttaaaatgtcaatcaaatcaatccatccattaagttggcatgttaacggaggtgacgtgtaccgttaaccacttac 37791819  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    || ||||||||||| ||||| || ||| |||||||||||| ||||||||||||| |||||| || ||| ||||| ||||| |||||||| ||||||    
T  37791820 aaggcttaccacgtcagatgccatgcaggcagggaccaaattgattgatttacaaaaaattgcc-aagaaccaacttgattgatttacagaaaatt 37791914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 38472369 - 38472525
Alignment:
Q  44 agtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactg 143  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| |||| |||||| | ||| ||||||| ||| ||||||| ||    
T  38472369 agtctctctgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaaacagagaccaaattg 38472468  T
Q  144 attgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    ||||||||||| ||||||  | ||||||||||||||||||||| || |||||| ||||    
T  38472469 attgatttacagaaaattgtc-aaggaccaaattgatggattttcagaaaattgccaa 38472525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 22155858 - 22155682
Alignment:
Q  13 gtccctgaatttacaaaatgtaaatcaaatcagtccctccg-ttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttacca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||| |||| |||         
T  22155858 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggct----- 22155764  T
Q  112 cgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
           || ||||||||||||||||||| | ||||||||||| |||||| || |||||||||||| |||||||| || |||||| ||||    
T  22155763 -------tgccacgcaagcagggaccaaattaattgatttacagaaaattgcc-aaggaccaaatttatggattttcagaaaattgccaa 22155682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 23904658 - 23904856
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagc---- 105  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||  |||| | |||||||||||||||||||| ||| |||| ||        
T  23904658 ttagtccatgaatttacaaaatgtcaatcaaatcagtccctccattaagttagtccgttaaggaaggtgacgtgtaacgttaacctcttacaaggctcct 23904757  T
Q  106 ----------ttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaat 195  Q
              ||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||||  |||||||||||||||| |||| || |||||    
T  23904758 cttacaaggtttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttatagaaaatttc--aaggaccaaattgatgaattttcagaaaat 23904855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 13039656 - 13039536
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||||||||||||| |||||||| |||||||||||||| |  |||||||||| || ||||| |||||||||| || |||||||  || ||||  |||||    
T  13039656 ttagtccctgaattttcaaaatgtcaatcaaatcagtccatatgttaagttggcctgttaacagaggtgacgtttaccgttaaccgcttacaagacttac 13039557  T
Q  110 cacgttagatgtcacgcaagc 130  Q
    |||||||||||||||||||||    
T  13039556 cacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 38549631 - 38549714
Alignment:
Q  19 gaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaa 102  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||| ||| ||||    
T  38549631 gaatttacaaaatgtccatcaaatcagtcccttcgttaagttggtctgttaacgaaggtgacgtgtaccgttaacctcttacaa 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 46437825 - 46437900
Alignment:
Q  125 gcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaa 201  Q
    |||||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||| || |||||| ||||    
T  46437825 gcaagcagggaccaaattgattgatttactgaaaattgc-aaaggaccaaattgatggattttcagaaaattgccaa 46437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 77905 - 77858
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  77905 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 77858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 29995109 - 29995171
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  29995109 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 29995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 35403476 - 35403414
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  35403476 ggacgaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 35403414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 35691625 - 35691672
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  35691625 ggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 35691672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 39857843 - 39857890
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  39857843 ggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 39857890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 22211664 - 22211617
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||||| || |||||||| |||||| ||||||||||||||||||    
T  22211664 ggaccaaattaattgatttacagaaaattgccaaggaccaaattgatg 22211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 38472459 - 38472505
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||||||| |||||||| ||||||  |||||||||||||||||    
T  38472459 gaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 38472505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34785137 - 34785084
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 54  Q
    ||||||||| ||||||||||||||  ||||||| |||||| | |||||||||||    
T  34785137 aatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgt 34785084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 47384493 - 47384538
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    |||||||||||| |||||||| ||||||  ||||||||||||||||    
T  47384493 gaccaaattgattgatttacataaaattgtcaaggaccaaattgat 47384538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 13169574 - 13169530
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattg 212  Q
    ||||||||||||| |||||||| |||||| |||| ||||||||||    
T  13169574 ggaccaaattgattgatttacataaaattgccaatgaccaaattg 13169530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 20479576 - 20479515
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  20479576 ggacgaaattgatggatttacacaaaattcc--aaggaccaaattgatggattttcagaaaatt 20479515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 23904795 - 23904842
Alignment:
Q  168 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatga 216  Q
    ||||||||||||| |||||| | ||||||| ||||||||||||||||||    
T  23904795 ggaccaaattgattgatttatagaaaattt-caaggaccaaattgatga 23904842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 148; Significance: 3e-78; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 7217 - 7047
Alignment:
Q  44 agtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactg 143  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  7217 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactg 7118  T
Q  144 attgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7117 attgatttacacaaaatttcc-aaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14366 - 14293
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacgga 74  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  14366 aatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacgga 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 7094 - 7032
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  7094 ggaccaaattgatggatttacacaaaatttccaa-ggaccaaattgatggattttcagaaaatt 7032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1048 - 1261
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  1048 aatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgac 1147  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    ||||| |||||||| | ||| ||||||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  1148 aaagcgtaccacgtcaaatgccacgcaagcagggaccaaattgatggatttacacaaaattt-cgaaggactaaattgatggatttacacaaaatttcca 1246  T
Q  201 aggaccaaattgatg 215  Q
    |||| ||||||||||    
T  1247 aggaacaaattgatg 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 1214 - 1276
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| |||||||||||||||||||| ||| ||||||||||||||| || ||||||    
T  1214 ggactaaattgatggatttacacaaaatttccaa-ggaacaaattgatggattttcagaaaatt 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 54281 - 54069
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||| |||||||| | ||||    
T  54281 aatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctttgac 54182  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| || ||    
T  54181 aaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattt-tgaaggacgaaattgatggatttacacaaaa-ttaca 54084  T
Q  201 aggaccaaattgatg 215  Q
    |||||||||||||||    
T  54083 aggaccaaattgatg 54069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 54115 - 54054
Alignment:
Q  133 ggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatt 196  Q
    |||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||    
T  54115 ggacgaaattgatggatttacacaaaattac--aaggaccaaattgatggattttcagaaaatt 54054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 1578 - 1381
Alignment:
Q  1 aatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgac 100  Q
    |||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||| ||    
T  1578 aatagcaatttagtccctgaatttacaaaatgtcattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttac 1481  T
Q  101 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttcca 200  Q
    || ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||| || |||||||||||||||||| || || |||||| |||    
T  1480 aaggcttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgcc-aaggaccaaattgatggaatttcagaaaattgcca 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 1447 - 1401
Alignment:
Q  169 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 215  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  1447 gaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 106752 - 106937
Alignment:
Q  19 gaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttaga 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||         |||||||| |||| || ||| |||| |||||||||||||||    
T  106752 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgtt---------gacgtgtaccgttgacctcttacaaggcttaccacgttaga 106842  T
Q  119 tgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 214  Q
    |||||||||||||||||||||| ||||||||||||  ||||||  | ||||||||||||||| ||||| || |||||| |||||||||||||||||    
T  106843 tgtcacgcaagcagggaccaaattgattgatttacgtaaaattgtc-aaggaccaaattgattgattttcataaaattgccaaggaccaaattgat 106937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 63735 - 63617
Alignment:
Q  10 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacatctgacaaagcttac 109  Q
    ||||||||  |||||| ||||| | || ||||||||||  || ||||||||||||  ||||| || ||||| || |  |||||| ||| |||| ||||||    
T  63735 ttagtccccaaatttagaaaatctcaaccaaatcagtcagtctgttaagttggtcagttaactgatgtgacatgcagtgttaacctcttacaaggcttac 63636  T
Q  110 cacgttagatgtcacgcaa 128  Q
    ||||| |||||||||||||    
T  63635 cacgtcagatgtcacgcaa 63617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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