View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4544_high_9 (Length: 323)
Name: NF4544_high_9
Description: NF4544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4544_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 2482173 - 2481882
Alignment:
| Q |
17 |
attttcctagcaccctaatacgtatatgattatacaatatcaatggaaaatatgggtgttctataaatgcagcacatcaggcctcacccgttacattaac |
116 |
Q |
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| T |
2482173 |
attttcctagcaccctaatacgtatatga--atacaatatcaatggaaaatatgggtgttctataaatgcagcaaatcaggcctcacccgttacgttaat |
2482076 |
T |
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| Q |
117 |
tacaacaaccaatcaggatttggatacaaataatcatcaagaaggggacgaacttgcagagaatacatttatccgatacatgtgacatatgcagagagtt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2482075 |
tacaacaaccaatcaggatttggatacaaataatcatcacgaaggggacgaacttgcagagaatacatttatccgatacatgtgacatatgcagagagtt |
2481976 |
T |
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| Q |
217 |
agctacggaaattaaattccagtggttaagccacaaaagtataactctgcaggtactacttgtatagatgggcaagagtgtgtgtatgtctgtg |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2481975 |
agctacggaaattaaattccagtggttaagccacaaaagtataactctgcaggtactacttgtatagatgggcaagagtgtgtgtttgtctgtg |
2481882 |
T |
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