View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4544_low_8 (Length: 389)

Name: NF4544_low_8
Description: NF4544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4544_low_8
NF4544_low_8
[»] scaffold0204 (1 HSPs)
scaffold0204 (136-266)||(16822-16952)
[»] chr1 (47 HSPs)
chr1 (11-137)||(1547281-1547408)
chr1 (11-132)||(15752028-15752150)
chr1 (11-123)||(47279197-47279310)
chr1 (20-122)||(11742414-11742517)
chr1 (11-132)||(10182063-10182185)
chr1 (11-132)||(38823213-38823335)
chr1 (11-138)||(16415638-16415767)
chr1 (11-122)||(21289674-21289793)
chr1 (13-132)||(2959747-2959867)
chr1 (13-132)||(14758040-14758160)
chr1 (11-132)||(238568-238689)
chr1 (11-132)||(3309147-3309268)
chr1 (11-132)||(42721038-42721160)
chr1 (11-132)||(10922726-10922848)
chr1 (11-132)||(47682549-47682670)
chr1 (49-132)||(7079168-7079251)
chr1 (11-137)||(39393377-39393504)
chr1 (11-137)||(48620631-48620758)
chr1 (11-132)||(31621608-31621730)
chr1 (11-122)||(27267254-27267364)
chr1 (11-119)||(27533035-27533144)
chr1 (1-137)||(32267028-32267165)
chr1 (11-137)||(8222125-8222249)
chr1 (15-137)||(34012436-34012559)
chr1 (15-132)||(18422650-18422768)
chr1 (11-98)||(32216088-32216176)
chr1 (7-121)||(3534942-3535057)
chr1 (11-132)||(19899824-19899946)
chr1 (7-132)||(23999346-23999472)
chr1 (11-132)||(28769652-28769773)
chr1 (11-137)||(37618949-37619078)
chr1 (11-137)||(15168083-15168217)
chr1 (11-123)||(28564836-28564949)
chr1 (11-103)||(40884841-40884934)
chr1 (11-132)||(27227540-27227654)
chr1 (11-137)||(15382927-15383054)
chr1 (11-122)||(4330288-4330402)
chr1 (15-116)||(9903113-9903215)
chr1 (11-132)||(30327007-30327129)
chr1 (87-132)||(43579245-43579290)
chr1 (90-137)||(4150490-4150537)
chr1 (11-105)||(51128885-51128980)
chr1 (18-123)||(37451294-37451400)
chr1 (87-137)||(42663785-42663835)
chr1 (80-137)||(22170748-22170805)
chr1 (67-132)||(30254857-30254922)
chr1 (45-132)||(27563995-27564083)
[»] scaffold0002 (2 HSPs)
scaffold0002 (11-132)||(137-259)
scaffold0002 (26-114)||(94458-94547)
[»] chr7 (47 HSPs)
chr7 (11-132)||(5657542-5657664)
chr7 (11-137)||(26524388-26524515)
chr7 (11-132)||(4582897-4583019)
chr7 (11-132)||(21991614-21991736)
chr7 (11-121)||(22687228-22687339)
chr7 (11-132)||(7334772-7334894)
chr7 (11-132)||(8861263-8861385)
chr7 (20-132)||(12165730-12165843)
chr7 (11-137)||(18797302-18797427)
chr7 (11-137)||(32821114-32821241)
chr7 (11-132)||(24211719-24211841)
chr7 (11-132)||(43686019-43686140)
chr7 (7-132)||(48928621-48928746)
chr7 (11-110)||(29173540-29173640)
chr7 (11-137)||(30055499-30055627)
chr7 (45-132)||(31579165-31579252)
chr7 (11-137)||(41765139-41765266)
chr7 (11-132)||(34362210-34362331)
chr7 (11-132)||(38258523-38258645)
chr7 (20-132)||(15612829-15612941)
chr7 (7-119)||(48928354-48928466)
chr7 (45-137)||(17842682-17842774)
chr7 (21-132)||(37109850-37109962)
chr7 (7-132)||(25691601-25691728)
chr7 (7-132)||(27283722-27283848)
chr7 (19-132)||(27421448-27421562)
chr7 (11-132)||(37347000-37347122)
chr7 (15-139)||(9355891-9356016)
chr7 (24-132)||(23111168-23111277)
chr7 (49-132)||(6546497-6546580)
chr7 (15-105)||(26980328-26980419)
chr7 (11-132)||(32432435-32432552)
chr7 (21-132)||(33688333-33688444)
chr7 (69-132)||(8299193-8299256)
chr7 (7-137)||(12390687-12390818)
chr7 (11-121)||(31520785-31520895)
chr7 (87-137)||(40381938-40381988)
chr7 (11-132)||(11071183-11071306)
chr7 (47-132)||(43925083-43925169)
chr7 (87-132)||(3953734-3953779)
chr7 (87-132)||(8133561-8133606)
chr7 (87-132)||(23402371-23402416)
chr7 (45-101)||(44598373-44598429)
chr7 (13-103)||(38053493-38053584)
chr7 (21-132)||(10359285-10359397)
chr7 (87-123)||(22955312-22955348)
chr7 (45-132)||(44413475-44413563)
[»] chr6 (19 HSPs)
chr6 (15-132)||(8513236-8513354)
chr6 (11-132)||(6088911-6089033)
chr6 (11-137)||(4318882-4319009)
chr6 (11-132)||(3879998-3880120)
chr6 (11-132)||(21017171-21017293)
chr6 (7-137)||(5627389-5627520)
chr6 (7-132)||(7235090-7235215)
chr6 (11-137)||(1945831-1945959)
chr6 (11-119)||(15491631-15491740)
chr6 (11-122)||(18498446-18498559)
chr6 (11-132)||(20768089-20768209)
chr6 (21-132)||(29182166-29182278)
chr6 (11-132)||(30353417-30353539)
chr6 (11-132)||(33618837-33618959)
chr6 (49-132)||(33893100-33893183)
chr6 (11-135)||(6091242-6091366)
chr6 (87-139)||(19631745-19631797)
chr6 (11-132)||(7055274-7055396)
chr6 (87-137)||(11084152-11084202)
[»] chr4 (53 HSPs)
chr4 (11-132)||(55241190-55241312)
chr4 (15-132)||(34948187-34948305)
chr4 (11-132)||(47253752-47253873)
chr4 (11-132)||(49375969-49376092)
chr4 (11-132)||(7703520-7703642)
chr4 (25-132)||(37775672-37775780)
chr4 (11-132)||(19089539-19089661)
chr4 (45-139)||(34361612-34361706)
chr4 (11-132)||(36493774-36493896)
chr4 (20-132)||(4597996-4598108)
chr4 (21-132)||(39397921-39398033)
chr4 (15-132)||(37287736-37287855)
chr4 (7-137)||(38011852-38011983)
chr4 (11-132)||(27396619-27396741)
chr4 (45-137)||(4205114-4205206)
chr4 (11-137)||(29584286-29584411)
chr4 (45-137)||(35021156-35021248)
chr4 (11-121)||(50764746-50764855)
chr4 (45-132)||(17167716-17167803)
chr4 (45-132)||(17173293-17173380)
chr4 (11-137)||(25701143-25701270)
chr4 (11-132)||(28003072-28003194)
chr4 (11-137)||(30002710-30002837)
chr4 (11-137)||(55477977-55478108)
chr4 (53-139)||(32912709-32912795)
chr4 (11-132)||(35025674-35025796)
chr4 (11-132)||(33341398-33341523)
chr4 (11-118)||(23761089-23761197)
chr4 (45-140)||(4396321-4396416)
chr4 (15-132)||(19440738-19440857)
chr4 (45-132)||(25184116-25184203)
chr4 (11-132)||(37663827-37663947)
chr4 (45-110)||(54499360-54499425)
chr4 (45-132)||(879669-879756)
chr4 (81-132)||(20097485-20097536)
chr4 (15-121)||(46888247-46888354)
chr4 (87-137)||(38812260-38812310)
chr4 (80-137)||(17272009-17272066)
chr4 (11-134)||(6864036-6864160)
chr4 (11-137)||(9139245-9139370)
chr4 (11-122)||(32592106-32592218)
chr4 (80-132)||(52516600-52516652)
chr4 (11-98)||(4934288-4934375)
chr4 (11-119)||(33816619-33816728)
chr4 (87-132)||(38811816-38811861)
chr4 (45-137)||(3042609-3042701)
chr4 (53-137)||(7152235-7152319)
chr4 (81-132)||(51204582-51204633)
chr4 (87-137)||(2704510-2704560)
chr4 (86-132)||(28293236-28293282)
chr4 (87-137)||(54995799-54995849)
chr4 (7-137)||(32579442-32579575)
chr4 (53-137)||(50697240-50697324)
[»] chr8 (40 HSPs)
chr8 (11-137)||(1204924-1205051)
chr8 (11-137)||(36695032-36695159)
chr8 (11-132)||(10555268-10555390)
chr8 (11-132)||(12876111-12876233)
chr8 (7-132)||(13307625-13307751)
chr8 (21-137)||(40862416-40862534)
chr8 (11-132)||(6098584-6098706)
chr8 (11-128)||(23854497-23854615)
chr8 (11-132)||(27082904-27083026)
chr8 (11-129)||(37970585-37970704)
chr8 (11-137)||(38643975-38644102)
chr8 (11-140)||(16222857-16222987)
chr8 (15-121)||(9864161-9864268)
chr8 (15-137)||(34894964-34895087)
chr8 (11-132)||(465844-465966)
chr8 (11-132)||(5300012-5300134)
chr8 (20-132)||(34952106-34952219)
chr8 (15-121)||(11727037-11727144)
chr8 (45-132)||(16446976-16447063)
chr8 (45-132)||(33906226-33906313)
chr8 (11-132)||(1150171-1150293)
chr8 (45-137)||(43643696-43643788)
chr8 (45-132)||(30654684-30654771)
chr8 (11-132)||(41362520-41362639)
chr8 (12-132)||(4133077-4133196)
chr8 (11-132)||(31933952-31934074)
chr8 (80-132)||(7891084-7891136)
chr8 (80-132)||(15009244-15009296)
chr8 (80-132)||(44869498-44869550)
chr8 (50-137)||(24823378-24823465)
chr8 (69-132)||(35459823-35459886)
chr8 (80-132)||(33197894-33197946)
chr8 (52-132)||(41911097-41911176)
chr8 (87-137)||(5018008-5018058)
chr8 (90-132)||(6446709-6446751)
chr8 (49-132)||(8803915-8803994)
chr8 (95-132)||(7998365-7998402)
chr8 (87-132)||(35735984-35736029)
chr8 (11-62)||(39099185-39099237)
chr8 (97-137)||(39099262-39099302)
[»] chr5 (50 HSPs)
chr5 (11-137)||(36860421-36860548)
chr5 (11-132)||(39572822-39572944)
chr5 (11-139)||(5112363-5112492)
chr5 (11-132)||(5837558-5837680)
chr5 (11-132)||(7693233-7693355)
chr5 (11-132)||(26268077-26268199)
chr5 (11-132)||(36866765-36866887)
chr5 (13-137)||(19119857-19119982)
chr5 (11-137)||(8741936-8742064)
chr5 (11-137)||(30969374-30969501)
chr5 (15-132)||(699153-699271)
chr5 (11-132)||(9200236-9200358)
chr5 (15-132)||(40133388-40133506)
chr5 (11-123)||(33908245-33908358)
chr5 (45-132)||(27318572-27318659)
chr5 (11-132)||(14409377-14409498)
chr5 (45-132)||(15724493-15724580)
chr5 (45-132)||(25501011-25501098)
chr5 (11-140)||(35826533-35826663)
chr5 (11-137)||(12910348-12910480)
chr5 (45-137)||(13956430-13956522)
chr5 (15-137)||(22255179-22255303)
chr5 (11-137)||(27330304-27330429)
chr5 (11-132)||(21088816-21088938)
chr5 (11-121)||(22980807-22980918)
chr5 (11-128)||(1429195-1429313)
chr5 (11-137)||(24886100-24886229)
chr5 (11-132)||(31786696-31786818)
chr5 (20-132)||(32563152-32563265)
chr5 (45-129)||(22019638-22019722)
chr5 (11-138)||(38528287-38528414)
chr5 (11-137)||(8466743-8466869)
chr5 (58-132)||(16004474-16004549)
chr5 (45-137)||(22974167-22974259)
chr5 (49-132)||(35933905-35933988)
chr5 (11-132)||(11898005-11898127)
chr5 (16-131)||(8436970-8437086)
chr5 (11-137)||(14919578-14919706)
chr5 (11-98)||(25668687-25668774)
chr5 (22-132)||(23116283-23116394)
chr5 (87-137)||(22616492-22616542)
chr5 (50-132)||(26317774-26317856)
chr5 (15-132)||(35511531-35511649)
chr5 (24-96)||(28416590-28416663)
chr5 (81-132)||(13380498-13380549)
chr5 (53-132)||(31705704-31705783)
chr5 (11-123)||(43308702-43308815)
chr5 (11-132)||(5829900-5830026)
chr5 (22-77)||(23954850-23954907)
chr5 (45-93)||(42342775-42342823)
[»] chr2 (38 HSPs)
chr2 (11-137)||(4166920-4167047)
chr2 (11-132)||(19424706-19424828)
chr2 (11-132)||(33551064-33551186)
chr2 (11-132)||(36641989-36642111)
chr2 (11-138)||(31570812-31570940)
chr2 (7-132)||(4264151-4264277)
chr2 (11-132)||(33660446-33660568)
chr2 (11-132)||(41463928-41464050)
chr2 (20-132)||(43770926-43771038)
chr2 (11-132)||(13711467-13711589)
chr2 (11-137)||(2325448-2325575)
chr2 (50-137)||(18494386-18494473)
chr2 (11-137)||(29242216-29242343)
chr2 (11-132)||(3176942-3177064)
chr2 (19-132)||(19313855-19313969)
chr2 (22-132)||(26357580-26357691)
chr2 (20-132)||(27350025-27350139)
chr2 (11-98)||(4478406-4478494)
chr2 (11-138)||(39167441-39167569)
chr2 (80-132)||(41465512-41465564)
chr2 (11-132)||(4763631-4763756)
chr2 (11-132)||(33902071-33902191)
chr2 (11-132)||(37905712-37905833)
chr2 (87-138)||(6177772-6177823)
chr2 (49-132)||(44913665-44913747)
chr2 (11-132)||(44285952-44286074)
chr2 (11-103)||(33709310-33709403)
chr2 (56-132)||(17054220-17054296)
chr2 (80-132)||(17071885-17071937)
chr2 (87-131)||(18947598-18947642)
chr2 (45-132)||(35958912-35958999)
chr2 (11-132)||(11366459-11366581)
chr2 (11-98)||(43648323-43648411)
chr2 (87-137)||(19093411-19093461)
chr2 (87-132)||(31861898-31861943)
chr2 (87-132)||(41643875-41643920)
chr2 (11-74)||(5881600-5881664)
chr2 (88-132)||(43446463-43446507)
[»] chr3 (51 HSPs)
chr3 (11-132)||(4015454-4015576)
chr3 (11-140)||(48354927-48355057)
chr3 (11-137)||(35844315-35844442)
chr3 (11-132)||(51213041-51213163)
chr3 (11-123)||(29099358-29099471)
chr3 (11-132)||(37157702-37157823)
chr3 (11-132)||(37203061-37203183)
chr3 (5-122)||(40935995-40936113)
chr3 (24-136)||(22446138-22446251)
chr3 (11-120)||(11357424-11357535)
chr3 (11-137)||(21193595-21193722)
chr3 (11-137)||(22450957-22451084)
chr3 (11-132)||(11466818-11466940)
chr3 (11-132)||(46297822-46297944)
chr3 (15-121)||(34132940-34133047)
chr3 (15-132)||(40552323-40552441)
chr3 (11-132)||(44186561-44186683)
chr3 (11-132)||(45174497-45174621)
chr3 (11-142)||(4761709-4761843)
chr3 (11-132)||(52040982-52041105)
chr3 (11-132)||(3655262-3655384)
chr3 (47-132)||(44891501-44891585)
chr3 (11-132)||(7327542-7327665)
chr3 (45-140)||(24489057-24489152)
chr3 (15-137)||(39282642-39282764)
chr3 (11-132)||(26941320-26941442)
chr3 (11-129)||(3362249-3362369)
chr3 (51-132)||(33698186-33698263)
chr3 (45-132)||(11835706-11835788)
chr3 (15-132)||(53229216-53229335)
chr3 (14-95)||(2007964-2008046)
chr3 (25-137)||(32373461-32373572)
chr3 (87-137)||(40640634-40640684)
chr3 (45-146)||(47481502-47481603)
chr3 (87-132)||(53811976-53812021)
chr3 (11-122)||(20373356-20373468)
chr3 (69-137)||(55343403-55343471)
chr3 (87-137)||(38392628-38392678)
chr3 (7-137)||(33378841-33378969)
chr3 (45-132)||(54828796-54828882)
chr3 (15-132)||(25579733-25579851)
chr3 (88-133)||(4556542-4556587)
chr3 (87-132)||(32180747-32180792)
chr3 (87-132)||(45879498-45879543)
chr3 (80-137)||(46994780-46994837)
chr3 (87-132)||(47930666-47930711)
chr3 (87-132)||(53818509-53818554)
chr3 (49-121)||(2613895-2613967)
chr3 (88-132)||(11872322-11872366)
chr3 (80-132)||(29163841-29163893)
chr3 (51-111)||(54505823-54505883)
[»] scaffold0009 (2 HSPs)
scaffold0009 (49-132)||(42351-42434)
scaffold0009 (80-137)||(100819-100876)
[»] scaffold0291 (1 HSPs)
scaffold0291 (11-132)||(7890-8012)
[»] scaffold0061 (1 HSPs)
scaffold0061 (11-132)||(43960-44082)
[»] scaffold0017 (1 HSPs)
scaffold0017 (11-132)||(154705-154827)
[»] scaffold0318 (1 HSPs)
scaffold0318 (52-132)||(11909-11990)
[»] scaffold0022 (1 HSPs)
scaffold0022 (51-132)||(146117-146198)
[»] scaffold0262 (1 HSPs)
scaffold0262 (86-132)||(12137-12183)


Alignment Details
Target: scaffold0204 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 16822 - 16952
Alignment:
Q  136 ttgttacaattatcttagattgaaatgattgatagttaagagtgttctggtttggtttccctctctttcgtttgtataatattttaattattattttcgg 235  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16822 ttgttacaattatcttagattgaaatgattgataattaagagtgttctggtttggtttccctctctttcgtttgtataatattttaattattattttcgg 16921  T
Q  236 tgaggcaatgctcgaatttctcaattttgat 266  Q
    |||||||||||||||||||||||||||||||    
T  16922 tgaggcaatgctcgaatttctcaattttgat 16952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 1547408 - 1547281
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||| || | | ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| |||    
T  1547408 atactatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtcatt 1547309  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||| |||||||| ||||    
T  1547308 ctcatgacttcaccatagaattttcctt 1547281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 15752150 - 15752028
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| |  ||| |||||||| |||||||||||| | |||||||||  ||||||||||||||||||| |||||| |||    
T  15752150 atactatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtcatt 15752051  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  15752050 ctcatgacttcaccatagaattt 15752028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 47279310 - 47279197
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| |||| ||| |||| |||||||||||||| |||| | |||    
T  47279310 atactatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcatt 47279211  T
Q  110 ctcatgacttcacc 123  Q
    ||||||||||||||    
T  47279210 ctcatgacttcacc 47279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 11742414 - 11742517
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    |||||||||||||||||  || ||| |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||| |||    
T  11742414 ggactgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagtgttaacttcaccagaaaagtcattctcataact 11742513  T
Q  119 tcac 122  Q
    ||||    
T  11742514 tcac 11742517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 10182063 - 10182185
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| ||||||| ||| | |||||||||  || ||| |||||||||||| |||||| |||    
T  10182063 atactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcatt 10182162  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| ||||||||    
T  10182163 ttcatgacttcaccatagaattt 10182185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 38823335 - 38823213
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| |||||||||||||  || ||| ||| ||||||||||||||| ||||| |||| ||  |||||||||||||| ||||||||||| |||    
T  38823335 atactatggggattgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtgttaacttaaccagaaaagtcatt 38823236  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  38823235 ctcatgacttcaccatagaattt 38823213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 16415767 - 16415638
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtg-gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttat 108  Q
    ||||||||| | ||||||||||||||| || ||| ||||| |  ||||||||||||| ||| |||| ||  |||||||||||||||||||||||||| ||    
T  16415767 atactatgatggctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcat 16415668  T
Q  109 tctcatgacttcaccgtagaatttcccttg 138  Q
    ||||||||||||||| |||||||| |||||    
T  16415667 tctcatgacttcaccttagaattttccttg 16415638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 21289793 - 21289674
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataat-------atagtgttaacttcaccagaaa 102  Q
    |||||||  |||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||||    
T  21289793 atactatagggactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatgatatagtgttaacttcaccagaaa 21289694  T
Q  103 agttattctcatgacttcac 122  Q
    ||| ||||||||||||||||    
T  21289693 agtcattctcatgacttcac 21289674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 2959867 - 2959747
Alignment:
Q  13 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 111  Q
    ||||||||||||||||||||||||  || ||| |||||||||| ||||||| || ||| |||| ||  |||||||||||||||| ||||||||| ||| |    
T  2959867 actatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcatttt 2959768  T
Q  112 catgacttcaccgtagaattt 132  Q
    |||||||||||| ||||||||    
T  2959767 catgacttcaccatagaattt 2959747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 14758160 - 14758040
Alignment:
Q  13 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 111  Q
    |||||| |||||||||||||||||| || ||| ||||||| | ||| ||||||| ||| |||| ||  ||||||||| |||||||||||||||| |||||    
T  14758160 actatggggactgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattct 14758061  T
Q  112 catgacttcaccgtagaattt 132  Q
    ||||||||||||||| |||||    
T  14758060 catgacttcaccgtaaaattt 14758040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 238568 - 238689
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  |  ||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  238568 atactatggggactgaacttttgatgtcattgtacaaacagtgga-tgttactcacaacatttttaatactatagtgttaacttcaccaaaaaagttatt 238666  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||||||  ||||||||    
T  238667 ttcgtgacttcactatagaattt 238689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 3309268 - 3309147
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| || |||||||||||| | || ||| |||||||||| |||||||||||||| |||| ||  |||||||||||||| ||||||||||| |||    
T  3309268 atactatgaagattgaacttttgataccactgtacaaacagtggg-tgttactcacaacacttttgatgttatagtgttaactttaccagaaaagtcatt 3309170  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||| ||| ||||||||    
T  3309169 ctcatgactttaccatagaattt 3309147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 42721160 - 42721038
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| |||||||||||||  || ||| ||||||||||||||||||||| | ||||||||| |||||| | ||||||||||| |||| | |||    
T  42721160 atactatggggattgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcatt 42721061  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| ||||||||    
T  42721060 ttcatgacttcaccatagaattt 42721038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 10922848 - 10922726
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||  |  ||| |||||||||||| |||||||  |||||||||||  ||||||||||||||||||| |||| | |||    
T  10922848 atactatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatt 10922749  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||||||| |||||| || |||||    
T  10922748 ctcatgatttcaccataaaattt 10922726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 47682549 - 47682670
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaaaa-cagtggg-gtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttat 108  Q
    |||||||||||| |||||||||||| | || ||| || ||||||| |||||||||||||||||||||||  ||  ||||||||||||||| |||||| |     
T  47682549 atactatgaggaatgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgcta--gtgttaacttcaccaaaaaagtcac 47682646  T
Q  109 tctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||| || |||||    
T  47682647 tctcatgacttcaccataaaattt 47682670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 7079168 - 7079251
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| ||| ||||||||| ||| || |||||    
T  7079168 agtggggtgttactcacaacacttttgatattatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaattt 7079251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 39393504 - 39393377
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| | |||||||||||| || ||| ||||| ||  || |||||||||||| |||| ||  ||||||||||||||||  |||||||| |||    
T  39393504 atactatggggattaaacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagtgttaacttcattagaaaagtcatt 39393405  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    ||||| ||||||||||||||||| ||||    
T  39393404 ctcataacttcaccgtagaattttcctt 39393377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 48620758 - 48620631
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| | |||||||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||  |||| |||||||||||| |||||||| |||    
T  48620758 atactaaggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaacttcacaagaaaagtcatt 48620659  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     | || |||||| | |||||||| ||||    
T  48620658 ttaataacttcaacatagaattttcctt 48620631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31621608 - 31621730
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||| ||||||||| || ||| ||| || |||||| ||||||  |||  ||| ||  ||||||||| ||||||| |||||||| |||    
T  31621608 atactatggggactgaatttttgatgccaccgtacaaatagcggggtgctactcaatacacctttgatgttatagtgttgacttcactagaaaagtcatt 31621707  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||    
T  31621708 ctcatgacttcaccgtagaattt 31621730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 27267254 - 27267364
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  |||||||||||| |||| || ||| |||||||||||||| |||||| |||||||||||  ||  ||||||||||||||| |||| | |||    
T  27267254 atactatggagactgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttttatgcta--gtgttaacttcaccaaaaaaatcatt 27267351  T
Q  110 ctcatgacttcac 122  Q
    |||||||||||||    
T  27267352 ctcatgacttcac 27267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 27533035 - 27533144
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| |||||||||||||| || ||| ||| |||||| |||||| ||||| | |||| ||  |||||||||||||||||||||||||| |||    
T  27533035 atactatggggattgaacttttgatgccactgtacaaagagtgggttgttacccacaatacttttgatgctatagtgttaacttcaccagaaaagtcatt 27533134  T
Q  110 ctcatgactt 119  Q
    ||||| ||||    
T  27533135 ctcataactt 27533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32267165 - 32267028
Alignment:
Q  1 tgggtagataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccag 99  Q
    ||||| ||| ||| |||||||| |||||||||||||  |  ||| ||||||||||||||||||||  |||||||| ||  |||| |||||||||||| |     
T  32267165 tgggttgatgataatatgaggagtgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaa 32267066  T
Q  100 aaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||| ||||| ||||||||||| || ||||| ||||    
T  32267065 aaaagtcattcttatgacttcaccataaaattttcctt 32267028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 8222249 - 8222125
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 110  Q
    |||||||||| |||||||||||||||| |  ||||  | ||| |||||||||||  |||||||| ||  ||||||||||||||||| | ||| || |||     
T  8222249 atactatgagaactgaacttttgatgccattgtaa--cggtgtggtgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtcattt 8222152  T
Q  111 tcatgacttcaccgtagaatttccctt 137  Q
    | |||||||||||||||||||| ||||    
T  8222151 ttatgacttcaccgtagaattttcctt 8222125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 34012436 - 34012559
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||| ||||||||||||||||| ||  || ||||||||| ||||||||||| ||| | || ||  |||||||||||||||| || ||| || ||| |||    
T  34012436 tatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttca 34012535  T
Q  114 tgacttcaccgtagaatttccctt 137  Q
    |||||||||| |||||||| ||||    
T  34012536 tgacttcaccatagaattttcctt 34012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18422768 - 18422650
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||||||||||||||||||||  |  ||| |||| ||||||||||||||   | |||||| ||  ||||||||||||||||||| |||||| ||| | |    
T  18422768 tatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttta 18422669  T
Q  114 tgacttcaccgtagaattt 132  Q
    |||||||||| ||||||||    
T  18422668 tgacttcaccatagaattt 18422650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 32216176 - 32216088
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 98  Q
    |||||| ||||||||||||||||| || |  ||| ||||||||| ||||||||||| |||||||| ||  |||||||||||||||||||    
T  32216176 atactacgaggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttcacca 32216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 3535057 - 3534942
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||| || | |||||||||||||||||  || | | |||||||  |||||||||||||||| |||| ||  ||||||||||||||||| |||||| |    
T  3535057 gataatattaaggggactgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaatt 3534958  T
Q  106 tattctcatgacttca 121  Q
     ||||| |||||||||    
T  3534957 aattctaatgacttca 3534942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 19899824 - 19899946
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||  |||||||||||||| |   || |||||||| ||||||||||   |||||||| ||  ||||||||||||||||||| |||| | |||    
T  19899824 atactatgagggttgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatt 19899923  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| ||||||||    
T  19899924 attatgacttcaccatagaattt 19899946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 23999472 - 23999346
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||||||||||| ||||||||||||||  |   || ||| |||||||||||||||   | |||||||||  | ||||||||||||||||| |||| |    
T  23999472 gataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaat 23999373  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||||| ||||||||||| || |||||    
T  23999372 cattcttatgacttcaccataaaattt 23999346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 28769773 - 28769652
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||| |||| |||||||| |  ||| |||| || ||||||||||||  |||||||| ||   |||||||||||||||| | ||||||||||    
T  28769773 atactatgaggaccgaacctttgatgccattgtacaaacggt-gggtgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatt 28769675  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| ||||||||    
T  28769674 tttatgacttcaccatagaattt 28769652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 37618949 - 37619078
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgtt--actcacaacattttttataatatagtgttaacttcaccagaaaagtta 107  Q
    |||||||||| |||||||||||||||  |   || |||||||||||||||  |||||  | |||||| ||  ||||||||||||||||||| |||||| |    
T  37618949 atactatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtca 37619048  T
Q  108 ttctcatgacttcaccgtagaatttccctt 137  Q
    |||| || |||||||| |||||||| ||||    
T  37619049 ttcttataacttcaccatagaattttcctt 37619078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 15168217 - 15168083
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta--------aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaa 102  Q
    |||||||| |||||||||||||||||| || |||        ||||||||||||| ||||||| ||| |||| ||  ||||||||| |||||||||||||    
T  15168217 atactatggggactgaacttttgatgccaccgtacaacgtacaaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaa 15168118  T
Q  103 agttattctcatgacttcaccgtagaatttccctt 137  Q
    |   |||||||| |||||||  |||||||| ||||    
T  15168117 aagcattctcatcacttcacgatagaattttcctt 15168083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 28564836 - 28564949
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| |||||||  |||||||||||  |||||||| ||  |||||||||||||||| || |||| | |||    
T  28564836 atactatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaaaatcatt 28564935  T
Q  110 ctcatgacttcacc 123  Q
     |||| ||||||||    
T  28564936 ttcataacttcacc 28564949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 40884934 - 40884841
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 103  Q
    |||||||  |||||||||||||||||| || ||| ||||||||||||| ||||||| ||| |||| ||  ||| ||||| ||||||||||||||    
T  40884934 atactatagggactgaacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgttatggtgttgacttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 27227540 - 27227654
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| || ||| |||||||| ||||      |  |||||||||||  ||  ||||||||||||||| |||| | |||    
T  27227540 atactatgaggactgaacttttgatgccactgtacaaacagtgaggtg------agtacattttttatgcta--gtgttaacttcaccaaaaaaatcatt 27227631  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  27227632 ctcatgacttcaccatagaattt 27227654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 15383054 - 15382927
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| || ||||||||||||||||  |  ||| |||| ||||| |||||||||  |||||||| ||  ||||||||||| ||||||| |||||| |||    
T  15383054 atactacgatgactgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatt 15382955  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     | || |||||||| |||||||| ||||    
T  15382954 tttataacttcaccatagaattttcctt 15382927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 4330402 - 4330288
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtg-ttaacttcaccagaaaagtta 107  Q
    ||||||||| ||||||||||||||| | || ||| ||||| | |||||||||||||| ||| |||| ||  ||||||| ||| ||||| ||||||||| |    
T  4330402 atactatgatgactgaacttttgatcccactgtacaaacattgggggtgttactcactacacttttgatgctatagtgtttatcttcatcagaaaagtca 4330303  T
Q  108 ttctcatgacttcac 122  Q
    ||||||| |||||||    
T  4330302 ttctcataacttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 9903113 - 9903215
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| ||| |||||||||||||  || ||| |||||| |||||||||||||| ||| |||| ||  |||||||||||||||| || |||||| ||| |||    
T  9903113 tatgtggattgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaacttcatcaaaaaagtcattttca 9903212  T
Q  114 tga 116  Q
    |||    
T  9903213 tga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 30327007 - 30327129
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||||| |  ||| |||| || |||| |||||||  |||||||| ||  ||||||||||| ||||| | |||||| |||    
T  30327007 atactatgatgactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaaattcacaaaaaaagtcatt 30327106  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||  ||||||||    
T  30327107 tttatgacttcactatagaattt 30327129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 43579290 - 43579245
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 43579245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 4150490 - 4150537
Alignment:
Q  90 acttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||||| ||| ||||||||||||| |||||||| ||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttcctt 4150537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 51128980 - 51128885
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||| | ||||||||||||||||  |  ||| |||| |||| ||||||||||  |||||||||||  ||||||||||||||||| | ||||||    
T  51128980 atactataatgactgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaacttcactaaaaaagt 51128885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 37451400 - 37451294
Alignment:
Q  18 gaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatga 116  Q
    |||||||||||||||||||  |  ||| |||| || |||||||||| |  |||||||| ||  |||||||||||||| |||| |||||| ||| | ||||    
T  37451400 gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaactttaccaaaaaagtcatttttatga 37451301  T
Q  117 cttcacc 123  Q
    |||||||    
T  37451300 cttcacc 37451294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 42663785 - 42663835
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||| | |||||| ||| ||||||||||||| |||||||||||||    
T  42663785 ttaacttcactaaaaaagtcattatcatgacttcaccatagaatttccctt 42663835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 22170805 - 22170748
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||  |||||||| ||| |||||| |||||| |||||||| ||||    
T  22170805 tatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttcctt 22170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 30254922 - 30254857
Alignment:
Q  67 acattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||| ||  |||||||||||||||| || |||||| ||| | ||||||||||| ||||||||    
T  30254922 acatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattt 30254857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 27563995 - 27564083
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcac-cagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||| ||||||||||| | |||||| |   |||||||||||||||||  | |||| | ||| |||| |||||||||||||||||    
T  27563995 aaacagtggagtgttactcactatatttttaaagttatagtgttaacttcactaaaaaaaatcattttcataacttcaccgtagaattt 27564083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 259 - 137
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| |  ||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| |||    
T  259 atactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcaccagaaaagtcatt 160  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||||||| ||||||||    
T  159 ttcgtgacttcaccatagaattt 137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 94458 - 94547
Alignment:
Q  26 aacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcat 114  Q
    |||||||||||| || ||| ||||||||||||||||||||| ||| |||| ||  |||| ||||||||||| ||||||||| ||| ||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaacttcatcagaaaagtcattttcat 94547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 5657542 - 5657664
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||||| |||||||| |||    
T  5657542 atactatgaagactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcatt 5657641  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  5657642 ctcatgacttcaccatagaattt 5657664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 26524388 - 26524515
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||| ||||||||||| || | | ||||| ||| |||||| ||||||||||||| ||  |||||||||||| ||||||||||||| |||    
T  26524388 atactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaacatcaccagaaaagtcatt 26524487  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||| |||||||| ||||    
T  26524488 ctcatgacttcaccatagaattttcctt 26524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 4583019 - 4582897
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  |  ||| ||| |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||    
T  4583019 atactatggggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcatt 4582920  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||||||| ||||||||    
T  4582919 ttcgtgacttcaccatagaattt 4582897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 21991736 - 21991614
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || ||| ||||||||||||||||||| ||||| |||| ||  ||||||||||||||||||| |||| | |||    
T  21991736 atactatggggactgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcatt 21991637  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  21991636 ctcatgacttcaccctagaattt 21991614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 22687339 - 22687228
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||| | || | | ||||||||| |||||||||||||||||||| ||  |||||||||||||||| ||||||||| |||    
T  22687339 atactatggggactgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatagtgttaacttcatcagaaaagtcatt 22687240  T
Q  110 ctcatgacttca 121  Q
    ||||||||||||    
T  22687239 ctcatgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 7334894 - 7334772
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||  |  ||| ||||||||||||||||||||  |||| ||||||  |||||||||||||||| || |||||| |||    
T  7334894 atactatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcatt 7334795  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||| ||||||||||||||||||    
T  7334794 ctcacgacttcaccgtagaattt 7334772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 8861385 - 8861263
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||||| |||||||||||| || ||| |||||||||||||||| ||| |||| |||| ||  ||||||||||||||| | |||||||| |||    
T  8861385 atactatggggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaacttcgcgagaaaagtcatt 8861286  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  8861285 ctcatgacttcaccatagaattt 8861263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 12165843 - 12165730
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    ||||| |||||||||||| || ||| ||||||||||||||||||||||||| |||  ||  |||||||||||||||||||||||||| ||| | | ||||    
T  12165843 ggacttaacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtgttaacttcaccagaaaagtcattttaacgact 12165744  T
Q  119 tcaccgtagaattt 132  Q
    ||||||||||||||    
T  12165743 tcaccgtagaattt 12165730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 18797427 - 18797302
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||  |  ||| ||||||||||||||||||||  |||||||||||  ||  ||||||||||||||| |||||| |||    
T  18797427 atactatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgtta--gtgttaacttcaccaaaaaagtcatt 18797330  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||| |||||||| ||||    
T  18797329 ctcatgacttcaccatagaattttcctt 18797302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 32821114 - 32821241
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| |||||||||||||||||||| |  ||| ||||||||| ||||||||||| |||||||| ||  |||| |||||||||||||| |||| | |||    
T  32821114 atactacgaggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcaccaaaaaaatcatt 32821213  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     ||||||||||||| |||||||| ||||    
T  32821214 ttcatgacttcaccatagaattttcctt 32821241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 24211841 - 24211719
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||| ||||||||||||||| |   || ||||||| ||||||||||||  |||||||| ||  ||||||||||||||||||| |||||| |||    
T  24211841 atactatgagggctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcatt 24211742  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  24211741 cttatgacttcaccatagaattt 24211719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 43686140 - 43686019
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||  |||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||    
T  43686140 atactatagggactgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcatt 43686042  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||||||| ||||||||    
T  43686041 ttcgtgacttcaccatagaattt 43686019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 48928621 - 48928746
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||| |||||||||||||||||  || ||| ||| ||||||||| ||||||| ||| |||| ||  ||||||||| ||||||||||||||||    
T  48928621 gataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagt 48928719  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||||||||||||||||| || |||||    
T  48928720 cattctcatgacttcaccataaaattt 48928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 29173640 - 29173540
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||| ||||||||||||||| |||| ||| || ||||||||||||||||||||||| |||    
T  29173640 atactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatactacagtgttaacttcaccagaaaagtcatt 29173541  T
Q  110 c 110  Q
    |    
T  29173540 c 29173540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 30055627 - 30055499
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttca-ccagaaaagttat 108  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  ||| |||| ||| |||||||||||||||| | | |||||| ||    
T  30055627 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcat 30055528  T
Q  109 tctcatgacttcaccgtagaatttccctt 137  Q
    ||| ||||||||||| |||||||| ||||    
T  30055527 tcttatgacttcaccatagaattttcctt 30055499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 31579165 - 31579252
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||    
T  31579165 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattt 31579252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 41765139 - 41765266
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||| ||||||||||| || ||| ||||||||||||| ||||||| ||| |||| ||  |||||| || |||| | ||||||||| |||    
T  41765139 atactatgaggactggacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgctatagtattgactttatcagaaaagtcatt 41765238  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||| | |||||| ||||    
T  41765239 ctcatgacttcaccatggaattttcctt 41765266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 34362210 - 34362331
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||| ||||| || ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||  | |||||||| |||    
T  34362210 atactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcatt 34362308  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||||| | |||||| ||||||||    
T  34362309 ctcataatttcaccatagaattt 34362331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 38258645 - 38258523
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||  |  ||| |||| ||| |||||||||||  |||||||||||  ||||||||||||||||||| |||| | |||    
T  38258645 atactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatt 38258546  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||||||||||||    
T  38258545 tttatgacttcaccgtagaattt 38258523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 15612829 - 15612941
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    |||||||||||||||||| ||  || ||||| |||||||||||||| |||| |||  ||  ||||||||||||||||| ||||| |||||||||||||||    
T  15612829 ggactgaacttttgatgccactctacaaacactggggtgttactcataacactttg-atgttatagtgttaacttcacaagaaacgttattctcatgact 15612927  T
Q  119 tcaccgtagaattt 132  Q
    ||||| ||||||||    
T  15612928 tcaccatagaattt 15612941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 48928354 - 48928466
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||| |||||||||||||||||  || ||| ||| ||||||||| ||||||| ||| |||| ||  ||||||||| ||||||||||||||||    
T  48928354 gataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagt 48928452  T
Q  106 tattctcatgactt 119  Q
     |||||||||||||    
T  48928453 cattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 17842682 - 17842774
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||| |||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| ||| | ||||||||||| |||||||| ||||    
T  17842682 aaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcctt 17842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 37109962 - 37109850
Alignment:
Q  21 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 119  Q
    ||||||||||||||||  |  ||| |||| |||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| ||| | |||||||    
T  37109962 gactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgactt 37109863  T
Q  120 caccgtagaattt 132  Q
    |||| ||||||||    
T  37109862 caccatagaattt 37109850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 25691601 - 25691728
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtg-ttactcacaacattttttataatatagtgttaacttcaccagaaaag 104  Q
    ||||||||||| || |||||||| ||||||| || ||| |||||||| |||  |||||||||| | |||| ||  ||||||||||||||||| |||||||    
T  25691601 gataatactataagaactgaactgttgatgccactgtacaaacagtgaggtaattactcacaatacttttgatgttatagtgttaacttcacgagaaaag 25691700  T
Q  105 ttattctcatgacttcaccgtagaattt 132  Q
    | ||||||||||||||||| || |||||    
T  25691701 tcattctcatgacttcaccataaaattt 25691728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 27283848 - 27283722
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||||||||||||||||||||   |  ||| |||| |||||||||||||||  |||||||| ||  ||||||||||||||||||| |||| |    
T  27283848 gataatactatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaat 27283749  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||| | || |||||||| ||||||||    
T  27283748 catttttataacttcaccatagaattt 27283722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 27421448 - 27421562
Alignment:
Q  19 aggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgac 117  Q
    ||||||||||||||||||  |  ||| ||||||||| ||||||||||||||| |||| ||  ||||||||||||||||||| |||| | ||| ||| |||    
T  27421448 aggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgac 27421547  T
Q  118 ttcaccgtagaattt 132  Q
    |||||| ||||||||    
T  27421548 ttcaccatagaattt 27421562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 37347122 - 37347000
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  || ||| ||||| ||||||||||||||  | |||||| ||  |||||| |||||||||||| |||| | |||    
T  37347122 atactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatcatt 37347023  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| || |||||    
T  37347022 ttcatgacttcaccataaaattt 37347000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 9355891 - 9356016
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||||| ||| |||||||||||  || ||| |||||||||||| || ||||| |||||||||||  ||||||||||| ||||||| ||  || |||||||    
T  9355891 tatgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctatagtgttaaattcaccaaaatggtcattctca 9355990  T
Q  114 tgacttcaccgtagaatttcccttgt 139  Q
    |||||||||| || ||||| ||||||    
T  9355991 tgacttcaccataaaattttccttgt 9356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 23111277 - 23111168
Alignment:
Q  24 tgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcac 122  Q
    |||||||||||||| |  ||| ||| ||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||| | ||| ||||||||||||    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcac 23111178  T
Q  123 cgtagaattt 132  Q
    |  |||||||    
T  23111177 cacagaattt 23111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 6546580 - 6546497
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||| ||||| |||| ||  ||||||||||||||||| |||||| | ||||| ||||||||||| ||||||||    
T  6546580 agtggggtgttactcgcaacacttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcaccatagaattt 6546497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 26980419 - 26980328
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||| |||||||||||||||||| || ||| |||| |||||||||||||||||||| |||| ||  |||| |||||||||||||| ||||||    
T  26980419 tatggggactgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaacttcaccataaaagt 26980328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 32432552 - 32432435
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||||||||||||  |  ||| ||||| ||||||||||||||||||||||||      ||||||||||||||||||||||| | |||    
T  32432552 atactatggagactgaacttttgatgtcattgtacaaacaatggggtgttactcacaacattttt-----gatagtgttaacttcaccagaaaaatcatt 32432458  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||||||| ||||||||    
T  32432457 ttcgtgacttcaccatagaattt 32432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 33688333 - 33688444
Alignment:
Q  21 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 119  Q
    ||||||||||||||||| || | | ||||||| || ||||||||| |||| |||| ||  |||||||||||||| ||||||||||| |||||||| ||||    
T  33688333 gactgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaactt-accagaaaagtcattctcataactt 33688431  T
Q  120 caccgtagaattt 132  Q
    |||| || |||||    
T  33688432 caccatataattt 33688444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 8299256 - 8299193
Alignment:
Q  69 attttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||| ||| |||||||||||||||||||||||||| ||| || |||||||||| ||||||||    
T  8299256 atttttgatactatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattt 8299193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 12390687 - 12390818
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||| ||||  |||||||||||  || | | |||||||||| |||||||||  ||| |||| ||  ||||||||||||||||||| ||||||    
T  12390687 gataatactatggggacataacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttatagtgttaacttcaccaaaaaagt 12390786  T
Q  106 tattctcatgacttcaccgtagaatttccctt 137  Q
       ||| ||||||||||| |||||||| ||||    
T  12390787 cgatctgatgacttcaccatagaattttcctt 12390818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 31520785 - 31520895
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || ||| ||||| ||| ||||||||||| | |||||| ||  |||||| |||||||||||| |||||| |||    
T  31520785 atactatg-ggactgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcatt 31520883  T
Q  110 ctcatgacttca 121  Q
     |||||||||||    
T  31520884 ttcatgacttca 31520895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 40381988 - 40381938
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcctt 40381938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 11071306 - 11071183
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt-tat 108  Q
    |||||||||| |||||||||||||||  || ||| ||||||||| ||||||||| | | |||||| || |||||||  |||||| |||| |||| |  ||    
T  11071306 atactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtactaactttaccaaaaaaatacat 11071207  T
Q  109 tctcatgacttcaccgtagaattt 132  Q
    | ||||||||||||| ||||||||    
T  11071206 tttcatgacttcaccatagaattt 11071183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 43925169 - 43925083
Alignment:
Q  47 acagtggggtgttactcacaacattttttataatatagtgttaacttcac-cagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||| ||||||||||||||||||||||||| || | ||||||||||||  | |||| | ||| || |||||| ||||||||||||    
T  43925169 acagtgaggtgttactcacaacattttttatactacaatgttaacttcactaaaaaaaatcattttcgtgactttaccgtagaattt 43925083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 3953779 - 3953734
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaattt 3953734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 8133561 - 8133606
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||| |||||||||||| |||||||||| |||||||||    
T  8133561 ttaacttcaccaaaaaagttattcttatgacttcacagtagaattt 8133606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 23402371 - 23402416
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattt 23402416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 44598429 - 44598373
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaa 101  Q
    ||||||| | |||||||||||||||||||| ||| |||||| |||||||||| ||||    
T  44598429 aaacagtagagtgttactcacaacatttttgatattatagtattaacttcacgagaa 44598373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 38053584 - 38053493
Alignment:
Q  13 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 103  Q
    |||||||| |||||||||||||||  |  ||| ||||||| |||| |||||||  |||||||||||  |||||| |||||||||||| ||||    
T  38053584 actatgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcaccaaaaaa 38053493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 10359285 - 10359397
Alignment:
Q  21 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 119  Q
    ||||||||||||||||  || ||| ||| ||| || |||||||||| ||| |||| ||  ||||   |||| || ||||||||||| ||| |||||||||    
T  10359285 gactgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctataagattaattttaccagaaaagtcattatcatgactt 10359384  T
Q  120 caccgtagaattt 132  Q
    |||| ||||||||    
T  10359385 caccatagaattt 10359397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 22955312 - 22955348
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcacc 123  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  22955312 ttaacttcaccagaaaagtcattctcattacttcacc 22955348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 44413475 - 44413563
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttca-ccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||| ||||||||||||||| | |||||| ||  ||||||||||||||||   | |||||| ||| ||||||||| ||| ||||||||    
T  44413475 aaacattggggtgttactcactatatttttgatgttatagtgttaacttcattaaaaaaagtcattttcatgactttaccatagaattt 44413563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 8513354 - 8513236
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| |||||||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||    
T  8513354 tatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctca 8513255  T
Q  114 tgacttcaccgtagaattt 132  Q
    |||||||||| ||||||||    
T  8513254 tgacttcaccatagaattt 8513236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 6089033 - 6088911
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||||||||||||| ||  || ||||||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||| | |||    
T  6089033 atactatggtgactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaacttcaccagaaaaatcatt 6088934  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  6088933 ctcatgacttcaccatagaattt 6088911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 4318882 - 4319009
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||  |||||||||||||  || ||| |||||||||||||||||||| |||| |||| ||  ||||||||||||||||||| |||||| |||    
T  4318882 atactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcaccaaaaaagtcatt 4318981  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||| |||||||| ||||    
T  4318982 ctcatgacttcaccatagaattttcctt 4319009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 3879998 - 3880120
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| |||||||||||||  |  ||| ||||||| ||||||||||||||||| |||| ||| |||| ||||||||||||||||||||| |||    
T  3879998 atactatggggattgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcaccagaaaagtcatt 3880097  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||| |||||||||| ||||||||    
T  3880098 ctcgtgacttcaccatagaattt 3880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 21017171 - 21017293
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||| |  ||| ||| | |||||||||||||||||||||||||||| || | |||||||||||||| |||||| |||    
T  21017171 atactatggggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcatt 21017270  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || ||||||||||||| |||||    
T  21017271 ttcgtgacttcaccgtataattt 21017293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 5627520 - 5627389
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||||||||||| ||||||||||||||  |   || ||| ||||||||||||||||  | |||||||||  ||||||||||||||||||| ||||||    
T  5627520 gataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagt 5627421  T
Q  106 tattctcatgacttcaccgtagaatttccctt 137  Q
     ||||| ||||||||||| |||||||| ||||    
T  5627420 cattcttatgacttcaccttagaattttcctt 5627389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 7235090 - 7235215
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||||| |||||||||||||||  || ||| ||||||||||||| ||||||| ||| |||| ||  ||||||||| |||||||| |||||||    
T  7235090 gataatactatgag-actgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttgacttcaccggaaaagt 7235188  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     |||||||| |||||||| ||||||||    
T  7235189 cattctcataacttcaccatagaattt 7235215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 1945959 - 1945831
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttat 108  Q
    ||||||||||| ||||||||||||||  |   || ||||||||||||||||||||  |||||||| ||  |||||||||||||||||| | |||||| ||    
T  1945959 atactatgagggctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcat 1945860  T
Q  109 tctcatgacttcaccgtagaatttccctt 137  Q
    ||| |||||||||||||||||||| ||||    
T  1945859 tcttatgacttcaccgtagaattttcctt 1945831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 15491740 - 15491631
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||| ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||| ||  || | |||||||||||| |||||||| |||    
T  15491740 atactatgagggctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaacttcacgagaaaagtcatt 15491641  T
Q  110 ctcatgactt 119  Q
    ||||| ||||    
T  15491640 ctcataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 18498559 - 18498446
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtgggg-tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttat 108  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||| |||| ||||| ||| |||| ||  |||| ||||||||||||||| ||||| ||    
T  18498559 atactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtcat 18498460  T
Q  109 tctcatgacttcac 122  Q
    ||||||||||||||    
T  18498459 tctcatgacttcac 18498446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 20768209 - 20768089
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 110  Q
    ||||||||||||||||||||||||||| ||    ||||| |||  || ||||||| ||| |||| ||  ||||||||| |||||||||||||||| ||||    
T  20768209 atactatgaggactgaacttttgatgccactaacaaacaatgga-tgctactcactacacttttgatgctatagtgttgacttcaccagaaaagtcattc 20768111  T
Q  111 tcatgacttcaccgtagaattt 132  Q
    ||||||||||||| ||||||||    
T  20768110 tcatgacttcaccatagaattt 20768089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 29182278 - 29182166
Alignment:
Q  21 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 119  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||  ||| | |||||||||||||    
T  29182278 gactgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctcatgactt 29182179  T
Q  120 caccgtagaattt 132  Q
    |||| || |||||    
T  29182178 caccataaaattt 29182166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 30353417 - 30353539
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||||| | ||||| || ||| |||||||| | | |||||| ||||| |||| ||  |||| ||||||||||||||||||||| |||    
T  30353417 atactatggagactgaactatcgatgccactgtacaaacagtgagatattactcgcaacacttttgatgttataatgttaacttcaccagaaaagtcatt 30353516  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  30353517 ctcatgacttcaccatagaattt 30353539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 33618959 - 33618837
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||| || ||| ||| | |||| || ||||||| ||| |||| ||   |||||||| ||||||||||||||||  ||    
T  33618959 atactatgagaactgaacttttgatgccaccgtacaaataatgggttgctactcactacacttttgatgcgatagtgttgacttcaccagaaaagtattt 33618860  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    | |||||||||||||||||||||    
T  33618859 cccatgacttcaccgtagaattt 33618837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 33893100 - 33893183
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||| |||| ||  ||||||||||||||||| | |||| ||||||| ||||||| ||| ||||||||    
T  33893100 agtggggtgttactcacaacacttttgatgttatagtgttaacttcactaaaaaaattattctaatgactttaccatagaattt 33893183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 6091242 - 6091366
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| ||| |||||||||||||||  |  ||| ||||| ||| ||||||||||| |||||||||||  || | ||||||||| |||| |||| |||||    
T  6091242 atactacgagtactgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgttaca-tgttaactttaccaaaaaaattatt 6091340  T
Q  110 ctcatgacttcaccgtagaatttccc 135  Q
     ||||||||||||  |||||||||||    
T  6091341 ttcatgacttcacaatagaatttccc 6091366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 19631797 - 19631745
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttgt 139  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttccttgt 19631745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 7055274 - 7055396
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||| ||||||||||||||  |   || ||| |||| ||||||||| |  | |||||||||  ||||||||||||||||||| |||| | |||    
T  7055274 atactatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcatt 7055373  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| || |||||    
T  7055374 cttatgacttcaccataaaattt 7055396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 11084152 - 11084202
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||| ||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttcctt 11084202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 55241190 - 55241312
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||| || ||| ||||||||||||||||||| ||||| |||| |||||||||| |||||||||| |||||||| |||    
T  55241190 atactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcatt 55241289  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  55241290 ctcatgacttcaccatagaattt 55241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 34948187 - 34948305
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||||||||||||||||||||| ||  || ||||||||||||||||||||||||| |||| ||  ||||||||||||||| |||||||||| |||||||    
T  34948187 tatgaggactgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctca 34948286  T
Q  114 tgacttcaccgtagaattt 132  Q
    |||||||||| || |||||    
T  34948287 tgacttcaccataaaattt 34948305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 47253873 - 47253752
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  || ||| ||||| |||| |||||||||||||| |||| || |||||||||||||||||||| |||||| |||    
T  47253873 atactatgaggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcatt 47253775  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  47253774 ctcatgacttcaccatagaattt 47253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 49376092 - 49375969
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaaaa-cagtggggtgttactcacaacattttttataatatagtgttaacttcaccag-aaaagttat 108  Q
    ||||||||| ||||||||||||||||| || ||| || |||||||||||||||||| ||| |||| ||  |||| ||||||||||||||| |||||| ||    
T  49376092 atactatgaagactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcat 49375993  T
Q  109 tctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||||||    
T  49375992 tctcatgacttcaccgtagaattt 49375969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 7703642 - 7703520
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || ||| |||||||||||||||||| |||||| |||| ||  |||||||||||||||||||||||||| |||    
T  7703642 atactatggggactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcatt 7703543  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||| | | ||||||||    
T  7703542 ctcatgactttaacatagaattt 7703520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 37775780 - 37775672
Alignment:
Q  25 gaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcacc 123  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||| | ||| | |||||||||||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcacc 37775681  T
Q  124 gtagaattt 132  Q
    |||||||||    
T  37775680 gtagaattt 37775672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 19089539 - 19089661
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |   || ||||||||||||||||||||  ||| |||| ||| |||||||||||||||| || ||||||||||    
T  19089539 atactatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttatt 19089638  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  19089639 cttatgacttcaccatagaattt 19089661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 34361612 - 34361706
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttgt 139  Q
    ||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| ||||| ||||||||||| |||||||| ||||||    
T  34361612 aaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccttgt 34361706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 36493774 - 36493896
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || ||| ||||| ||||||||||||||| | |||||| ||  |||||| |||||||||||| ||||||||||    
T  36493774 atactatggggactgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttatt 36493873  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| ||||||||    
T  36493874 ttcatgacttcaccatagaattt 36493896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 4598108 - 4597996
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||| |||  ||  |||||||||||||||||||||||||| ||||| ||||||    
T  4598108 ggactgaacttttgatgccactgtacaaacagtggggtgttactcacaacactttg-atgttatagtgttaacttcaccagaaaagtcattctaatgact 4598010  T
Q  119 tcaccgtagaattt 132  Q
    ||||| || |||||    
T  4598009 tcaccataaaattt 4597996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 39398033 - 39397921
Alignment:
Q  21 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 119  Q
    ||||||||||||||||  || ||| ||||| ||||||||||||||||||| |||| ||  ||||||||||||||||||| |||||| ||||| |||||||    
T  39398033 gactgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgactt 39397934  T
Q  120 caccgtagaattt 132  Q
    |||| ||||||||    
T  39397933 caccatagaattt 39397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 37287855 - 37287736
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattctc 112  Q
    |||||||| |||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||  |||||||||||||| ||| | |||||| ||||||    
T  37287855 tatgaggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctc 37287756  T
Q  113 atgacttcaccgtagaattt 132  Q
    || |||||||| ||||||||    
T  37287755 attacttcaccatagaattt 37287736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 38011983 - 38011852
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||| |||| |||||||||||||||||  || ||| ||||||||||||| || |||| ||| |||| ||  ||||||||| ||||||||||||||||    
T  38011983 gataatattatggggactgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttgacttcaccagaaaagt 38011884  T
Q  106 tattctcatgacttcaccgtagaatttccctt 137  Q
     |||||||||| |||||| |||||||| ||||    
T  38011883 cattctcatgatttcaccatagaattttcctt 38011852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 27396741 - 27396619
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||  |||||||||||  |  ||| ||||||| |||||||||||| |||| |||| ||  |||| ||||||||||||||||||||| |||    
T  27396741 atactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaacttcaccagaaaagtcatt 27396642  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  27396641 ctcatgacttcaccatagaattt 27396619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 4205206 - 4205114
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||||| ||| ||||||||| ||| |||||||||||||||| ||||||||| ||| || |||||||||| |||||||| ||||    
T  4205206 aaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaattttcctt 4205114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 29584286 - 29584411
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||||| |  ||| |||||||| |||||||||||  ||| |||| ||  |||||||||||||||||||||||||| |||    
T  29584286 atactatgaagactgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcatt 29584383  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    | || ||||||||| |||||||| ||||    
T  29584384 cccacgacttcaccatagaattttcctt 29584411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 35021156 - 35021248
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||| ||||||||||| |||||||| ||  |||| ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||    
T  35021156 aaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcctt 35021248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 50764855 - 50764746
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||    |||||||||||||| || ||||||||||    
T  50764855 atactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgat--gttagtgttaacttcatcaaaaaagttatt 50764758  T
Q  110 ctcatgacttca 121  Q
    ||||||||||||    
T  50764757 ctcatgacttca 50764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 17167803 - 17167716
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||| ||| || | |||||||| ||||||||    
T  17167803 aaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaattt 17167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 17173380 - 17173293
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||| ||| || | |||||||| ||||||||    
T  17173380 aaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaattt 17173293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 25701143 - 25701270
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  || ||| ||||||| ||||||||||||| ||| |||| ||  |||| ||||||||| |||| |||||| |||    
T  25701143 atactatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaactttaccaaaaaagtcatt 25701242  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     ||||||||||||| || ||||| ||||    
T  25701243 atcatgacttcaccataaaattttcctt 25701270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 28003072 - 28003194
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||||  || ||| ||||||||| ||  |||| || ||| |||| ||  ||||||||| |||||||||||||||| |||    
T  28003072 atactatgatgactgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcatt 28003171  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  28003172 ctcatgacttcaccatagaattt 28003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 30002710 - 30002837
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| || ||||||||||||||||  || ||| |||||||| |||||||||||||||| |||| ||  || ||||||||||||||||||||| | |||    
T  30002710 atactaagaagactgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcatt 30002809  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     | ||||||||||| |||| ||| ||||    
T  30002810 ttaatgacttcaccatagagttttcctt 30002837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 55477977 - 55478108
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-----aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||||||||||||||||||||||  |  |||     ||||||||| |||||||||   |||||||| ||  ||||||||||||||||||| |||| |    
T  55477977 atactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaat 55478076  T
Q  106 tattctcatgacttcaccgtagaatttccctt 137  Q
     ||||||||||||||||| |||||||| ||||    
T  55478077 cattctcatgacttcaccatagaattttcctt 55478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 32912709 - 32912795
Alignment:
Q  53 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttgt 139  Q
    ||||||||||||  |||||||| ||  ||||||||||||||||||| |||||| ||||| ||||||||||| |||||||| ||||||    
T  32912709 gggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccttgt 32912795  T

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Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 35025674 - 35025796
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| |||||||||||||||||||  |  ||| ||||||||||||| ||||||| ||| |||| ||  ||||||||| |||||||||||||| | |||    
T  35025674 atactacgaggactgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcatt 35025773  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||| | ||||||||    
T  35025774 ttcatgacttcagcatagaattt 35025796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 33341523 - 33341398
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacatt----ttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||| |||||||||||||||||| || ||| ||||||||||||||| ||| ||||| |    ||| || |||||||||||| |||||||||||| |    
T  33341523 atactatg-ggactgaacttttgatgccactgtacaaacagtggggtgttcctcgcaacaatcaattttgatgatatagtgttaatttcaccagaaaaat 33341425  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||||||||||||||||  ||||||||    
T  33341424 cattctcatgacttcactatagaattt 33341398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 23761197 - 23761089
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  ||  || |||||||| |||||||||||||||| |||| ||  |||||||||||||| || |||| ||| |||    
T  23761197 atactatggggactgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaactttacaagaatagtcatt 23761098  T
Q  110 ctcatgact 118  Q
    |||||||||    
T  23761097 ctcatgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 4396416 - 4396321
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttgtt 140  Q
    |||| |||||||||||||||  |||||||||||  ||||||||||||||||| | |||||| ||| | ||||||||||  |||||||| |||||||    
T  4396416 aaacggtggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttccttgtt 4396321  T

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Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 19440738 - 19440857
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||||||||||||||||||||| |  ||| |||| |||| |||||| |||  |||||||| ||  |||||||||||| |||||| |||||| |||||||    
T  19440738 tatgaggactgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaacatcaccaaaaaagtcattctca 19440837  T
Q  114 tgac-ttcaccgtagaattt 132  Q
    |||| |||||| ||||||||    
T  19440838 tgactttcaccatagaattt 19440857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 25184203 - 25184116
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||| | ||||||||||  |||||||| ||  ||||||||||||||||||| || ||| ||||||||||||||||| ||||||||    
T  25184203 aaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattt 25184116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 37663827 - 37663947
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  ||| |||| ||    |||||||||||||| || |||||| |||    
T  37663827 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaat--gttagtgttaacttcatcaaaaaagtcatt 37663924  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  37663925 cttatgacttcaccatagaattt 37663947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 54499360 - 54499425
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 110  Q
    |||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||||    
T  54499360 aaacggtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattc 54499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 879669 - 879756
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||| || |||||||||||  |||||||| ||  ||||||||| ||||||||| |||| ||||||||||||||||||| || |||||    
T  879669 aaacaatgaggtgttactcattacatttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattt 879756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 20097485 - 20097536
Alignment:
Q  81 atagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaattt 20097536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 46888247 - 46888354
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| ||||||||||||||||||  | ||| ||| |||||||| |||||||| ||| |||| ||  |||||| ||||||||| ||||||||||||| ||     
T  46888247 tatggggactgaacttttgatgccgctgtacaaatagtggggtattactcactacaattttgatgttatagtattaacttcatcagaaaagttattttct 46888346  T
Q  114 tgacttca 121  Q
    ||||||||    
T  46888347 tgacttca 46888354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 38812260 - 38812310
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 38812310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 17272066 - 17272009
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||||||||||||||| |||| || ||||||||| |||||||| ||||    
T  17272066 tatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 17272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 6864160 - 6864036
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||| ||||||||||| |  ||| ||| ||| || ||||| |||  | |||||| ||  ||||||| ||||||||||| |||||| |||    
T  6864160 atactatgaggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtcatt 6864061  T
Q  110 ctcatgacttcaccgtagaatttcc 134  Q
    |||||||| ||||| || |||||||    
T  6864060 ctcatgacatcaccatacaatttcc 6864036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 9139370 - 9139245
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| ||||||||| |||  || ||| |||| |||||||||||||||| |  ||||||||  ||||  ||||||||||||| |||||| | |    
T  9139370 atactatggggattgaactttttatgtcactgtacaaacggtggggtgttactcacta--ttttttatgctataacgttaacttcaccaaaaaagtcaat 9139273  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     ||||||||||||| |||||||| ||||    
T  9139272 ttcatgacttcaccatagaattttcctt 9139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 32592218 - 32592106
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| | |||||||||||||||||  ||  || ||||||||| ||||||||| ||||| |||| ||| | |||||||||||||| || |||||| |||    
T  32592218 atactaaggggactgaacttttgatgtcactatacaaacagtggagtgttactctcaacacttttgatactgtagtgttaacttcatcaaaaaagtcatt 32592119  T
Q  110 ctcatgacttcac 122  Q
     | ||||||||||    
T  32592118 ataatgacttcac 32592106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 52516652 - 52516600
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  52516652 tatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaattt 52516600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 4934288 - 4934375
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtgttaacttcacca 98  Q
    |||||||||||| |||||||||||||| |  ||| ||||| | |||||||||||||| ||||||||||||   |||||||||||||||||    
T  4934288 atactatgaggattgaacttttgatgccagtgtacaaacaatgggggtgttactcactacattttttata--ctagtgttaacttcacca 4934375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 33816619 - 33816728
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||||||||||||| || ||| ||| |||| |||| ||||||| ||| |||| ||  || | |||| |||||||||||||| | |||    
T  33816619 atactatggagactgaacttttgatgccaccgtataaatagtgaggtgctactcactacacttttgatgctacaatgttgacttcaccagaaaaatcatt 33816718  T
Q  110 ctcatgactt 119  Q
    ||||||||||    
T  33816719 ctcatgactt 33816728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 38811861 - 38811816
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattt 38811816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 3042701 - 3042609
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||| ||||||| |||||||  ||||||| |||  ||||||||||||||||||| |||| | ||| | |||| |||||| |||||||| ||||    
T  3042701 aaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatagaattttcctt 3042609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 7152235 - 7152319
Alignment:
Q  53 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||| | | |||| ||  |||| ||||||||| ||||||||||| |||  |||||||||||| |||||||| ||||    
T  7152235 gggtgttactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttcctt 7152319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 51204633 - 51204582
Alignment:
Q  81 atagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||| |||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 51204582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 2704560 - 2704510
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||||| ||| ||||||||||||| || ||||| ||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcctt 2704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 28293236 - 28293282
Alignment:
Q  86 gttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||    
T  28293236 gttaacttcaccgaaaaagtcattctcatgacttcagcgtagaattt 28293282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 54995799 - 54995849
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||| |||||| ||| ||||||||||| |||||||||| ||||    
T  54995799 ttaacttcaccaaaaaagtcattatcatgacttcatcgtagaattttcctt 54995849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 32579575 - 32579442
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta----aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaa 102  Q
    |||||||||||||| ||| |||||||||||  || |||    ||||| ||||||| |||||||  || |||| ||  |||| |||| |||||||||||||    
T  32579575 gataatactatgag-actaaacttttgatggcaccgtacaacaaacactggggtgctactcactgcacttttgatgttataatgttgacttcaccagaaa 32579477  T
Q  103 agttattctcatgacttcaccgtagaatttccctt 137  Q
    ||| |||||||  |||||||| || ||||| ||||    
T  32579476 agtcattctcagaacttcaccataaaattttcctt 32579442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 50697324 - 50697240
Alignment:
Q  53 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||   | |||||||||  ||||||||| ||||||| | |||| | ||| | |||||||||||||||||||| ||||    
T  50697324 gggtgttactcgttatattttttatgttatagtgtttacttcactaaaaaaatcatttttatgacttcaccgtagaattttcctt 50697240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 1205051 - 1204924
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||  ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||    
T  1205051 atactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaacttcaccagaaaagtcatt 1204952  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||| ||||| ||||    
T  1204951 ctcatgacttcaccgtaaaattttcctt 1204924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 36695032 - 36695159
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||    
T  36695032 atactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcatt 36695131  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     || |||||||||| |||||||| ||||    
T  36695132 ttcctgacttcaccatagaattttcctt 36695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 10555268 - 10555390
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||  |  ||| ||||||||| ||||||||||  |||||||||||  ||||||||||||||||||| |||||| |||    
T  10555268 atactatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatt 10555367  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||    
T  10555368 ctcatgacttcaccgtagaattt 10555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 12876233 - 12876111
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  12876233 atactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaacttcatcagaaaagtcatt 12876134  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||| ||| ||||||||    
T  12876133 ttcgtgacttaaccatagaattt 12876111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 13307751 - 13307625
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||| |||||||||||||||||  || ||| ||| |||| |||||||||||||||| |||| ||  |||||||||||||||||||||||| |    
T  13307751 gataatactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaat 13307652  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||||||||||||||||| ||||||||    
T  13307651 cattctcatgacttcaccatagaattt 13307625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 40862534 - 40862416
Alignment:
Q  21 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacatttttt-ataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    ||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| || |||||    
T  40862534 gactgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaagttattttcgtgact 40862435  T
Q  119 tcaccgtagaatttccctt 137  Q
    ||||  |||||||| ||||    
T  40862434 tcactatagaattttcctt 40862416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 6098584 - 6098706
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || ||| ||||||||||||||||||||| | |||||| ||  |||||| |||||||||||| ||||||||||    
T  6098584 atactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttatt 6098683  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| ||||||||    
T  6098684 ttcatgacttcaccatagaattt 6098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 23854497 - 23854615
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  | | ||||||| ||||||||||||  |||||||||||  ||||||||||||||||||| |||||| |||    
T  23854497 atactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatt 23854596  T
Q  110 ctcatgacttcaccgtaga 128  Q
    |||||||||||||||||||    
T  23854597 ctcatgacttcaccgtaga 23854615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 27082904 - 27083026
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||||||||||| |||| || | | ||||||||||||||||||||| ||| |||| ||  |||||||||||||||||||||||||| | |    
T  27082904 atactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcagt 27083003  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  27083004 ctgatgacttcaccatagaattt 27083026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 37970585 - 37970704
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||| ||||||||||||||  |  ||| ||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| |||||| |||    
T  37970585 atactatgagggctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcatt 37970684  T
Q  110 ctcatgacttcaccgtagaa 129  Q
    |||||||||||||| |||||    
T  37970685 ctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 38644102 - 38643975
Alignment:
Q  11 atactatgaggactgaacttttgatgcgac-agtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||||||||||||| || ||  ||||||||||||||||||||||||| |||| ||  |||||||||||||| |||| |||||| |||    
T  38644102 atactatggagactgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcatt 38644003  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    ||||||| |||||| |||||||| ||||    
T  38644002 ctcatgatttcaccatagaattttcctt 38643975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 16222987 - 16222857
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| |||| ||||||   ||||||| | |||||||||  ||||||||||| |||||||||||||| |||    
T  16222987 atactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcaccagaaaagtcatt 16222888  T
Q  110 ctcatgacttcaccgtagaatttcccttgtt 140  Q
    ||||||| ||||||||||||||| |||||||    
T  16222887 ctcatgatttcaccgtagaattttccttgtt 16222857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 9864268 - 9864161
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||| ||| ||     
T  9864268 tatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcg 9864169  T
Q  114 tgacttca 121  Q
    ||||||||    
T  9864168 tgacttca 9864161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 34895087 - 34894964
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||| ||||||||||||||||| ||  || ||||||||| ||||||||||| ||| | || ||  |||||||||||||||| ||||||||| ||| |||    
T  34895087 tatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttca 34894988  T
Q  114 tgacttcaccgtagaatttccctt 137  Q
    |||||||||| |||||||| ||||    
T  34894987 tgacttcaccatagaattttcctt 34894964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 465966 - 465844
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| | |||||||| ||||||||| || ||| ||||||||||||||||||||||||| |||| ||  ||| ||||||||||||||| |||||| |||    
T  465966 atactaaggggactgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcatt 465867  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| || |||||    
T  465866 ttaatgacttcaccataaaattt 465844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 5300012 - 5300134
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||| ||||||||||||||||||| || ||| ||||||| | ||| |||| |||||| |||| ||  ||||||||||||||||  | |||||| |||    
T  5300012 atactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagtgttaacttcattaaaaaagtcatt 5300111  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  5300112 ctcatgacttcaccatagaattt 5300134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 34952106 - 34952219
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    |||||||||||||||||  || ||| |||||||||| |||||||||||||| |||| || ||||||||||||||| ||||||||||| ||| | ||||||    
T  34952106 ggactgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaacttgaccagaaaagtcattttaatgact 34952205  T
Q  119 tcaccgtagaattt 132  Q
    | ||  ||||||||    
T  34952206 ttactatagaattt 34952219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 11727144 - 11727037
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||||||||||||||||||||| ||  || ||| |||||||||||||| |||||| |||| ||  ||||||||||||||||||| |||| | |||||||    
T  11727144 tatgaggactgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattctca 11727045  T
Q  114 tgacttca 121  Q
    | ||||||    
T  11727044 taacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 16446976 - 16447063
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||| ||| |||| ||  |||||||||||||| | ||||||||| ||| ||||||||||||| ||||||||    
T  16446976 aaacagtggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaattt 16447063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 33906313 - 33906226
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||| ||||||| ||| |||| ||| ||||||||| |||||||||||||||| |||||||| | |||||| ||||||||    
T  33906313 aaacagtggggtgctactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattt 33906226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 1150171 - 1150293
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||||     ||| |||||||||| |||||||||  |||||||| ||  ||||| ||||||||||||| |||||| |||    
T  1150171 atactatgatgactgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcatt 1150270  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  1150271 cttatgacttcaccatagaattt 1150293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 43643696 - 43643788
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||| | ||||||||||  |||||||| ||  ||||||||||||||||||| || ||| ||||||||||||||||| |||||||| ||||    
T  43643696 aaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcctt 43643788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 30654684 - 30654771
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||| | | ||| ||||||||||| || |||||    
T  30654684 aaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttcaccataaaattt 30654771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 41362639 - 41362520
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||| ||||||||||||||  ||  || ||| ||||||||||||||||| ||||||||   |   ||||||||||||||||| |||||| |||    
T  41362639 atactatgaggtctgaacttttgatgtcactatacaaatagtggggtgttactcactacattttt---atgctagtgttaacttcaccaaaaaagtcatt 41362543  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     |||| |||||||| ||||||||    
T  41362542 ttcataacttcaccatagaattt 41362520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 4133077 - 4133196
Alignment:
Q  12 tactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 110  Q
    |||||||||||||||||||||||||| || ||| |||||||  ||| |||||||| |  ||||||||  ||  ||||||||||||||| |||||| ||||    
T  4133077 tactatgaggactgaacttttgatgccactgtacaaacagtcaggtattactcactatcttttttatgcta--gtgttaacttcaccaaaaaagtcattc 4133174  T
Q  111 tcatgacttcaccgtagaattt 132  Q
    | ||||||| ||| || |||||    
T  4133175 tgatgacttgaccataaaattt 4133196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31933952 - 31934074
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||| | ||||||||||||||||  |  ||| ||| ||||||||||||||||  | |||||| |||  |||||||||||||||||| |||| | |||    
T  31933952 atactataatgactgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcatt 31934051  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||||| |||||||  ||||||||    
T  31934052 ctcataacttcacgttagaattt 31934074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 7891084 - 7891136
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||| | |||||| ||||||||||||||||| ||||||||    
T  7891084 tatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaattt 7891136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 15009296 - 15009244
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||    
T  15009296 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattt 15009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 44869550 - 44869498
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||| |||||||||||| || | |||||||||||||||    
T  44869550 tatagtgttaacttcaccaaaaaagttattcttataatttcaccgtagaattt 44869498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 24823378 - 24823465
Alignment:
Q  50 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||| |  |||| |||| ||| ||||||||||||||||||| |||||| |||||||| |||| ||| ||| |||| ||||    
T  24823378 gtggggtgttacacttaacacttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcctt 24823465  T

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Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 35459823 - 35459886
Alignment:
Q  69 attttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||| |||||| ||||||| || | |||||| ||||||||||||||||| ||||||||    
T  35459823 attttttatattatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaattt 35459886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 33197946 - 33197894
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||| ||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  33197946 tatagtattaacttaatcagaaaaattattctcatgacttcaccatagaattt 33197894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 41911097 - 41911176
Alignment:
Q  52 ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||| |||| || ||||||| |||||||||||| |||| | | | ||||||||||| ||||||||||    
T  41911097 ggggtgttactcacgacacttttgatgatatagtattaacttcaccaaaaaaatca-tatcatgacttcatcgtagaattt 41911176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 5018058 - 5018008
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||| | |||||| ||| ||||||||||||| |||||||||||||    
T  5018058 ttaacttcactaaaaaagtcattatcatgacttcaccatagaatttccctt 5018008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 6446709 - 6446751
Alignment:
Q  90 acttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaattt 6446751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 8803915 - 8803994
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||| ||||||||||  |||||||| ||  ||||||||||||||||||| |||||| ||    ||||||||||| ||||||||    
T  8803915 agtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttcaccatagaattt 8803994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 7998402 - 7998365
Alignment:
Q  95 accagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaattt 7998365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 35735984 - 35736029
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||| |||||| ||||| ||||||||||| ||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaattt 35736029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39099185 - 39099237
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttact 62  Q
    ||||||||||||||||||||||||||| |  ||| ||| ||||||||||||||    
T  39099185 atactatgaggactgaacttttgatgctagtgtacaaagagtggggtgttact 39099237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 39099262 - 39099302
Alignment:
Q  97 cagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||| ||||||||||||||||| |||||||| ||||    
T  39099262 cagaaaagtcattctcatgacttcaccatagaattttcctt 39099302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 36860548 - 36860421
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  36860548 atactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcatt 36860449  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     || |||||||||| |||||||| ||||    
T  36860448 ttcgtgacttcaccatagaattttcctt 36860421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 39572944 - 39572822
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||  || | | ||||||||| |||||||||||||||||||||||| |||||| ||||||| || |||||||| |||    
T  39572944 atactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaacttaactagaaaagtcatt 39572845  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  39572844 ctcatgacttcaccatagaattt 39572822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 5112363 - 5112492
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||  |||||| |||||||||||| |||||| |||    
T  5112363 atactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcatt 5112462  T
Q  110 ctcatgacttcaccgtagaatttcccttgt 139  Q
     ||||||||||||| || ||||| ||||||    
T  5112463 ttcatgacttcaccataaaattttccttgt 5112492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 5837680 - 5837558
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||| ||||||||  || ||| ||||||||||||||||||||||||| |||| ||  |||||||||| ||||||||||||||| |||    
T  5837680 atactatggagactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcatt 5837581  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||||||| |||||||||||||||    
T  5837580 ctcatgaattcaccgtagaattt 5837558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 7693355 - 7693233
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| ||||| |||||||||||||| || ||| |||||||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||| |||    
T  7693355 atactaagaggattgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcatt 7693256  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| ||||||||    
T  7693255 ttaatgacttcaccatagaattt 7693233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 26268199 - 26268077
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||||| |||||||||||  || ||| |||||||||||||||||||| |||| |||| ||  |||||||||||||||||||||||| | |||    
T  26268199 atactatgtggactaaacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcatt 26268100  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||||||||||||| |||||||||    
T  26268099 ctcatgacttcactgtagaattt 26268077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 36866887 - 36866765
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||  |||||||||||||||||| |  ||| ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||    
T  36866887 atactatcgggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcatt 36866788  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || |||||||||| ||||||||    
T  36866787 ttcgtgacttcaccatagaattt 36866765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 19119982 - 19119857
Alignment:
Q  13 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 111  Q
    |||||| |||||||||||||||||  || ||| ||||||||||||||||||  ||||| |||| ||  ||||||||||||||||||| |||||| |||||    
T  19119982 actatggggactgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagtgttaacttcaccacaaaagtcattct 19119883  T
Q  112 catgacttcaccgtagaatttccctt 137  Q
    |||||||||||| |||||||| ||||    
T  19119882 catgacttcaccatagaattttcctt 19119857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 8741936 - 8742064
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttat 108  Q
    ||||||||  ||||||||||||||||| |  ||| ||||| | |||||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||    
T  8741936 atactatggagactgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcat 8742035  T
Q  109 tctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||| |||||||| ||||    
T  8742036 tctcatgacttcaccatagaattttcctt 8742064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 30969374 - 30969501
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||| ||||||||||||||||||||| |||| ||  ||||||||||||||||||||| || | |||    
T  30969374 atactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatcatt 30969473  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||  ||||||||| ||||    
T  30969474 ctcatgacttcattgtagaattttcctt 30969501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 699271 - 699153
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||| ||||||||||||||||  || ||| ||||||||||||||||||||| | |||||||||  |||||||||||||||| ||||||||| |||||||    
T  699271 tatgatgactgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctca 699172  T
Q  114 tgacttcaccgtagaattt 132  Q
    | |||||||| || |||||    
T  699171 taacttcaccataaaattt 699153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 9200358 - 9200236
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| ||||||| |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||    
T  9200358 atactaagaggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagttatt 9200259  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| || |||||    
T  9200258 ttaatgacttcaccataaaattt 9200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 40133506 - 40133388
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| |||||||||||||||||| |  ||| ||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||| ||| ||     
T  40133506 tatggggactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcg 40133407  T
Q  114 tgacttcaccgtagaattt 132  Q
    |||||||||| ||||||||    
T  40133406 tgacttcaccatagaattt 40133388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 33908358 - 33908245
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| ||| ||||||| ||| |||| || |||||||||| |||||||||||||  | |||    
T  33908358 atactatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtgttgacttcaccagaaagttcatt 33908259  T
Q  110 ctcatgacttcacc 123  Q
    ||||||||||||||    
T  33908258 ctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 27318572 - 27318659
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||| ||||||||||| |||||||||||  | |||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  27318572 aaacagtggtgtgttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaattt 27318659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 14409377 - 14409498
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaa-aacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||| || |||  || ||||||||| ||||||| |||||||| ||  ||||||||| |||||||||||||| | |||    
T  14409377 atactatgag-actgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttatagtgttgacttcaccagaaaaatcatt 14409475  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  14409476 ctcatgacttcaccatagaattt 14409498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 15724580 - 15724493
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||||| | |||| ||  ||||||||||||||||||| |||||| |||||||| |||||||| ||||||||    
T  15724580 aaacagtggggtgttactcacaaaacttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccatagaattt 15724493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 25501011 - 25501098
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||| ||||||| |||||||| |||| ||  |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  25501011 aaacagtgaggtgttattcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgacttcaccatagaattt 25501098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 35826533 - 35826663
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  || ||| ||||| ||  ||||||||||  |||||||| ||  |||||| |||||||||| | |||||| |||    
T  35826533 atactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtcatt 35826632  T
Q  110 ctcatgacttcaccgtagaatttcccttgtt 140  Q
     ||||||||||||| |||||||| |||||||    
T  35826633 atcatgacttcaccatagaattttccttgtt 35826663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 12910480 - 12910348
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta------aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaag 104  Q
    ||||||||||||||||||||||||||  || |||      ||||||||||||||||| ||| | |||||| ||  |||||| |||||||||||| |||||    
T  12910480 atactatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcactatatttttgatgttatagttttaacttcaccaaaaaag 12910381  T
Q  105 ttattctcatgacttcaccgtagaatttccctt 137  Q
    | ||| ||||||||||||| |||||||| ||||    
T  12910380 tcattttcatgacttcaccatagaattttcctt 12910348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 13956430 - 13956522
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||| |||||||||||| ||| |||| ||  ||||||||||||||||  |||||||| ||| |||||||||||||||||||||| ||||    
T  13956430 aaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcctt 13956522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 22255303 - 22255179
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacatttttt-ataatatagtgttaacttcaccagaaaagttattctc 112  Q
    |||||| |||||||||||||||| |  ||| |||| |||||||||||||||  ||||||||| ||  |||| |||||||||||||| |||||||||| |     
T  22255303 tatgagaactgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgttaacttcaccaaaaaagttattttt 22255204  T
Q  113 atgacttcaccgtagaatttccctt 137  Q
    |||||||||||||||| ||| ||||    
T  22255203 atgacttcaccgtagagttttcctt 22255179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 27330429 - 27330304
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||||| |  ||| |||||||  |||||||||||  ||| |||| ||  |||||||||||||||||||||||||| |||    
T  27330429 atactatgaagactgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcatt 27330332  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    | || ||||||||| |||||||| ||||    
T  27330331 cccacgacttcaccatagaattttcctt 27330304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 21088816 - 21088938
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttat 108  Q
    |||||||| |||||||||||||||||  |  ||| |||||||||||||| ||||||||||||||||||| || ||| ||||||||||| | |||||| ||    
T  21088816 atactatggggactgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttttatactacagt-ttaacttcaccaaaaaaagtcat 21088914  T
Q  109 tctcatgacttcaccgtagaattt 132  Q
    | || |||||||| ||||||||||    
T  21088915 tttcgtgacttcatcgtagaattt 21088938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 22980918 - 22980807
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacag-taaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  |  | | |||||||||||| ||||||||   |||||| ||| |||||||||||||||||||||||||| |||    
T  22980918 atactatggggactgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcatt 22980819  T
Q  110 ctcatgacttca 121  Q
    ||||| ||||||    
T  22980818 ctcataacttca 22980807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 1429195 - 1429313
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||  ||||||| ||||||||| |  ||| ||||||||||||||||||||| | |||||| ||  ||||||||||||||||||| || ||| |||    
T  1429195 atactatggagactgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcatt 1429294  T
Q  110 ctcatgacttcaccgtaga 128  Q
     ||||||||||||| ||||    
T  1429295 ttcatgacttcaccataga 1429313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 24886229 - 24886100
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc--agaaaagtta 107  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  |||||||| ||  |||||| |||||||||||  | |||||| |    
T  24886229 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaacttcaccaaaaaaaagtca 24886130  T
Q  108 ttctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||| |||||| || ||||| ||||    
T  24886129 ttctcatgatttcaccataaaattttcctt 24886100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31786696 - 31786818
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||| || ||| |||||||||||   | ||||| |||||||| ||  ||||||||||||||||||| |||||| |||    
T  31786696 atactatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctatagtgttaacttcaccaaaaaagtcatt 31786795  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    ||||  |||||||  ||||||||    
T  31786796 ctcactacttcactatagaattt 31786818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 32563265 - 32563152
Alignment:
Q  20 ggactgaacttttgatgcgacagtaaa-acagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    |||||||||||||||||  || ||| | ||||||| ||||||||||||||| |||| ||  |||||||||||||||| ||||||| | ||| | ||||||    
T  32563265 ggactgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgact 32563166  T
Q  119 tcaccgtagaattt 132  Q
    ||||| ||||||||    
T  32563165 tcaccatagaattt 32563152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 22019722 - 22019638
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaa 129  Q
    ||||| ||||||||||||||||||| |||| ||  |||||| ||||||||||||||||||| ||||| || |||||||| |||||    
T  22019722 aaacaatggggtgttactcacaacacttttgattctatagttttaacttcaccagaaaagtcattctaataacttcaccatagaa 22019638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 38528287 - 38528414
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||  || ||| ||||| ||||||||||||||  ||| |||| ||  |||||||||||||||| |||||||   |||    
T  38528287 atactatgag-actgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccatt 38528385  T
Q  110 ctcatgacttcaccgtagaatttcccttg 138  Q
     ||||||||||||| |||||||| |||||    
T  38528386 ttcatgacttcaccatagaattttccttg 38528414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 8466869 - 8466743
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||| |||||||||||| | || ||| ||| || ||||||||| |||||||| |||| ||  || ||||||||||||||||||||||| |||    
T  8466869 atactatggggattgaacttttgataccactgtacaaagag-ggggtgttattcacaacacttttgatgttacagtgttaacttcaccagaaaagtcatt 8466771  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||| ||| | |||||||| ||||    
T  8466770 ctcatgacctcatcatagaattttcctt 8466743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 16004474 - 16004549
Alignment:
Q  58 ttactcacaacattttttataatatagtgttaacttcaccagaaaagt-tattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||    
T  16004474 ttactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattt 16004549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 22974167 - 22974259
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||| |||||||||  || ||||| ||  ||||||||||||||||||| |||| | |||||||| |||||||| |||||||| ||||    
T  22974167 aaacagtgggatgttactcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcctt 22974259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 35933988 - 35933905
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||| |||||||||||||||| |||| ||  |||||||||||||||| || |||| | ||||||||||||||||| || |||||    
T  35933988 agtgaggtgttactcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattt 35933905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 11898127 - 11898005
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaaaac-agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||| |||||||||||  || ||| ||| ||| ||||||||||||   || |||| ||  |||| | ||||||| |||||||||||||||    
T  11898127 atactatgaggactaaacttttgatgtcactgtacaactagtagggtgttactcagtgcacttttgatgctataatattaactttaccagaaaagttatt 11898028  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| || |||||    
T  11898027 atcatgacttcaccctaaaattt 11898005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 8437086 - 8436970
Alignment:
Q  16 atgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcat 114  Q
    |||||||||||||||||||||  || ||| ||||| |||| |||||||||| ||| |||  |   ||||||||||| ||||||| |||| | ||||||||    
T  8437086 atgaggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcat 8436987  T
Q  115 gacttcaccgtagaatt 131  Q
    ||||||||  |||||||    
T  8436986 gacttcacattagaatt 8436970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 14919578 - 14919706
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttca-ccagaaaagttat 108  Q
    ||||||||||||||||||||||||||  |   || |||||||| |||||||||||  |||||||| ||  |||| ||||||||||| | | |||| | ||    
T  14919578 atactatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaacttcatcaaaaaaaataat 14919677  T
Q  109 tctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||| || ||||| ||||    
T  14919678 tctcatgacttcaccatataattttcctt 14919706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 25668774 - 25668687
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 98  Q
    |||||| | |||||||||||||||||| || ||  ||||||||||||||||||||||||| |||| ||  || ||||||||||||||||    
T  25668774 atactaaggggactgaacttttgatgccactgttcaaacagtggggtgttactcacaacacttttgatgtta-agtgttaacttcacca 25668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 23116283 - 23116394
Alignment:
Q  22 actgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttc 120  Q
    |||||||||||||| | || ||| ||||||||||||| ||||||| ||| |||| ||  |||| |||||||||||  | |||||| ||| ||||||| ||    
T  23116283 actgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaacttcataaaaaaagtcattttcatgacgtc 23116382  T
Q  121 accgtagaattt 132  Q
    ||| ||||||||    
T  23116383 accatagaattt 23116394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22616542 - 22616492
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||| ||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcctt 22616492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 26317774 - 26317856
Alignment:
Q  50 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||   | |||||| ||  ||||||||||||||||||| |||||| ||| ||||||||||| | ||||||||    
T  26317774 gtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattt 26317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 35511531 - 35511649
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||| ||||||||||||||||  ||  || ||||||||| ||||||||||| ||| | || ||  |||| ||||||||||| |||||| || ||| |||    
T  35511531 tatgatgactgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttca 35511630  T
Q  114 tgacttcaccgtagaattt 132  Q
    |||||||||| ||| ||||    
T  35511631 tgacttcaccataggattt 35511649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 28416590 - 28416663
Alignment:
Q  24 tgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcac 96  Q
    |||||||||||| | || ||| |||||||||| |||||||||||| | |||| ||| |||||||||||||||||    
T  28416590 tgaacttttgattccactgtacaaacagtgggatgttactcacaatacttttgatattatagtgttaacttcac 28416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 13380549 - 13380498
Alignment:
Q  81 atagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| || |||||    
T  13380549 atagggttaacttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 31705704 - 31705783
Alignment:
Q  53 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||   |||||||| ||  ||||||||||||||||||| |||| | ||| | ||||||||||| ||||||||    
T  31705704 gggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattt 31705783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 43308702 - 43308815
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcac-cagaaaagttat 108  Q
    ||||||||||||||||||||||||||| |  |||  |||||| |||||||| |||  |||||||| ||  |||| ||||||||| ||  | |||||| ||    
T  43308702 atactatgaggactgaacttttgatgccattgtacgaacagt-gggtgttattcattacatttttgatgttataatgttaactttactaaaaaaagtcat 43308800  T
Q  109 tctcatgacttcacc 123  Q
    |||||||||||||||    
T  43308801 tctcatgacttcacc 43308815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 5830026 - 5829900
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttat----aatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||||| |||||||||||  |  ||| |||| || ||||||||||||  |||||||||||    | |||| |||||||||||||| |||| |    
T  5830026 atactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgttaattataatgttaacttcaccaaaaaaat 5829927  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||| | | ||||||||| ||||||||    
T  5829926 catttttacgacttcaccctagaattt 5829900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 23954850 - 23954907
Alignment:
Q  22 actgaacttttgatgcgac-agtaaaa-cagtggggtgttactcacaacattttttat 77  Q
    |||||||||||||||| || ||||||| |||||||||||||||||| | |||||||||    
T  23954850 actgaacttttgatgccactagtaaaaacagtggggtgttactcactatattttttat 23954907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 42342823 - 42342775
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaactt 93  Q
    |||||||||||| ||||||||||||||||| ||  |||||| |||||||    
T  42342823 aaacagtggggtattactcacaacatttttgatgttatagtattaactt 42342775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 4167047 - 4166920
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||| |  ||| ||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||| |||    
T  4167047 atactatggggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcatt 4166948  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     || |||||||||| |||||||| ||||    
T  4166947 ttcgtgacttcaccatagaattttcctt 4166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 19424706 - 19424828
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||| |||||||||||| ||  || ||||| ||||||||||||||||||| |||| ||  |||||||||||||||||||||||||  |||    
T  19424706 atactatgaggactaaacttttgatgccactatataaacaatggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagccatt 19424805  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| || |||||    
T  19424806 ctcatgacttcaccataaaattt 19424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 33551064 - 33551186
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||| ||||||||||||  |  ||| ||||||||||||||||||||| |||||||| ||  ||||||||||||||||| | |||||| |||    
T  33551064 atactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcatt 33551163  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||    
T  33551164 ctcatgacttcaccgtagaattt 33551186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 36642111 - 36641989
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  || ||| |||||||| |||||||||| ||||| |||| ||  |||||| |||| |||||||||||||| |||    
T  36642111 atactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaatttcaccagaaaagtcatt 36642012  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  36642011 ctcatgacttcaccatagaattt 36641989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 31570812 - 31570940
Alignment:
Q  11 atactatgaggactgaacttttgatgcgac-agtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || |  |||| |||||||||||||| |||||| |||| ||  ||||||||||| ||||||||||||||||||    
T  31570812 atactatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttacaacacttttaatgttatagtgttaatttcaccagaaaagttatt 31570911  T
Q  110 ctcatgacttcaccgtagaatttcccttg 138  Q
    ||||| |||||||| |||||||| |||||    
T  31570912 ctcataacttcaccatagaattttccttg 31570940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 4264151 - 4264277
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    ||||||||||||  ||||||||||||||||  || ||| |||||||||| |||||||||||||| |||| ||  |||||||||||||| |||||||||||    
T  4264151 gataatactatggagactgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttaccagaaaagt 4264250  T
Q  106 tattctcatgacttcaccgtagaattt 132  Q
     ||| | ||||||||||| ||||||||    
T  4264251 cattatgatgacttcaccatagaattt 4264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 33660446 - 33660568
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| |||||||||||||||||||| || ||| ||||||| ||||||||||||||||| |||| ||  |||||||||||||| || |||||||| |||    
T  33660446 atactaagaggactgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcatt 33660545  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| ||||||||    
T  33660546 ttaatgacttcaccatagaattt 33660568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 41463928 - 41464050
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||| |||||||||||||| || ||| |||||||| |||||||||||||||| |||| ||  |||||| |||||||||||| ||| || |||    
T  41463928 atactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaacttcaccaaaaatgtcatt 41464027  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||| ||||||||| ||||||||    
T  41464028 ctcacgacttcaccatagaattt 41464050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 43770926 - 43771038
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 118  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||||||| |||| | ||||| ||||||    
T  43770926 ggactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcacca-aaaaatcattctaatgact 43771024  T
Q  119 tcaccgtagaattt 132  Q
    ||||| ||||||||    
T  43771025 tcaccatagaattt 43771038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 13711589 - 13711467
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||| ||| ||||| |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||  |||| ||||||||||||||||||||| |||    
T  13711589 ataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcatt 13711490  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  13711489 ctgatgacttcaccatagaattt 13711467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 2325448 - 2325575
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| |  ||| ||||| ||||||||||||||  |||||| | ||  |||| |||||||||||| |||||||| |||    
T  2325448 atactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtcatt 2325547  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    | ||| |||||||| |||||||| ||||    
T  2325548 cacataacttcaccatagaattttcctt 2325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 18494386 - 18494473
Alignment:
Q  50 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||| |||||||||||||  ||||||| ||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcctt 18494473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 29242216 - 29242343
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||| ||||||||||||||| | || ||| ||||||||||||||||| ||| | |||||||||  |||||| |||||||||||| ||||   |||    
T  29242216 atactatgaagactgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatagttttaacttcaccaaaaaaaccatt 29242315  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     ||||||||||||| |||||||| ||||    
T  29242316 ttcatgacttcaccatagaattttcctt 29242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 3177064 - 3176942
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||||||| | |||||||||| ||||||||| ||| |||||| ||||||||| ||||||||| |||    
T  3177064 atactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtcatt 3176965  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     || | |||||||| ||||||||    
T  3176964 ttcgtaacttcaccatagaattt 3176942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 19313969 - 19313855
Alignment:
Q  19 aggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgac 117  Q
    ||||||||||||||||||  || ||| ||| |||  |||||||||||||||| |||| ||  |||| ||||||||||||||||||||| ||||| |||||    
T  19313969 aggactgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctaatgac 19313870  T
Q  118 ttcaccgtagaattt 132  Q
    |||||| ||||||||    
T  19313869 ttcaccatagaattt 19313855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 26357691 - 26357580
Alignment:
Q  22 actgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttc 120  Q
    |||||||||||||||  || ||| |||||||||| |||||||||| ||| |||| ||  |||||||||||||||| ||||||||| ||| ||||||||||    
T  26357691 actgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttc 26357592  T
Q  121 accgtagaattt 132  Q
    ||| || |||||    
T  26357591 accataaaattt 26357580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 27350025 - 27350139
Alignment:
Q  20 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa-gttattctcatgac 117  Q
    |||||||||||||||||  || ||| |||||||| ||||||||||||||||||||| ||  ||||||||||||||||||| ||||  ||||| | |||||    
T  27350025 ggactgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaacttcaccaaaaaatattattttaatgac 27350124  T
Q  118 ttcaccgtagaattt 132  Q
    |||||| || |||||    
T  27350125 ttcaccataaaattt 27350139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 4478494 - 4478406
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 98  Q
    |||||||||||||| |||||||||||| || ||| ||||| ||| ||||||||||||||| |||| ||  |||||||||||||||||||    
T  4478494 atactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaacttcacca 4478406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 39167441 - 39167569
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| |||||||| |||||||||||||| | |||| ||| |||  ||||||||||| || |||| | |||    
T  39167441 atactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgttactcacaatacttttgatactattctgttaacttcatcaaaaaaatcatt 39167540  T
Q  110 ctcatgacttcaccgtagaatttcccttg 138  Q
    ||| |||||||||| || ||||| |||||    
T  39167541 ctcgtgacttcaccataaaattttccttg 39167569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 41465564 - 41465512
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41465564 tatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattt 41465512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 4763756 - 4763631
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgtt---aacttcaccagaaaagtt 106  Q
    |||||||| | |||||||||||||||  || ||| ||||||||||||||||||||| ||| ||||  | ||||||||||   ||||||| |||||||||     
T  4763756 atactatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgttgttaacttcatcagaaaagtc 4763657  T
Q  107 attctcatgacttcaccgtagaattt 132  Q
    ||| ||||||||||| | ||||||||    
T  4763656 attttcatgacttcatcatagaattt 4763631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 33902191 - 33902071
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||| ||||||||||||||||||||  |   || |||||||||||| |||||||| |||||||||||  ||  |||||||||||||||||||||| |||    
T  33902191 atactttgaggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgtta--gtgttaacttcaccagaaaagtcatt 33902094  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || | ||||||| | ||||||||    
T  33902093 ctaacgacttcatcatagaattt 33902071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 37905833 - 37905712
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| |||| ||||||||||||||   |||||||||||  ||||||||||||||||||| |||| | |||    
T  37905833 atactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaacttcacca-aaaaatcatt 37905735  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | || |||||||| ||||||||    
T  37905734 tttataacttcaccatagaattt 37905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 6177823 - 6177772
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttg 138  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttccttg 6177772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 44913747 - 44913665
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||| ||||||||||||||||||||| ||| || ||||||||||||| || |||||| ||| || |||||||||| ||||||||    
T  44913747 agtgaggtgttactcacaacatttttgatactacagtgttaacttca-cataaaagtcattttcgtgacttcaccatagaattt 44913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 44286074 - 44285952
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||||| |||||||||||| ||  || |||||||| | | || ||| ||||| |||| ||  |||||||||||||||| ||||||| | |||    
T  44286074 atactatgtggactaaacttttgatgccactatacaaacagtgagatattgctcgcaacacttttgatgctatagtgttaacttcatcagaaaaatcatt 44285975  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    | ||||||||||||||| |||||    
T  44285974 cgcatgacttcaccgtataattt 44285952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 33709310 - 33709403
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaa-aacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 103  Q
    |||||||| |||||||||||||||||  || |||  |||||||| ||||||||| ||||| |||| ||  ||||||||||||||||||| ||||    
T  33709310 atactatggggactgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtgttaacttcaccataaaa 33709403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 17054220 - 17054296
Alignment:
Q  56 tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||| || |||||||| ||  |||||| |||||||||||| |||||| |||| |||||||||||| ||||||||    
T  17054220 tgttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattt 17054296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 17071885 - 17071937
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  17071885 tatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattt 17071937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 18947598 - 18947642
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatt 131  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  18947598 ttaacttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 35958999 - 35958912
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||| ||||  |||||||||||  |||||||  |||||||||| |||||| ||| | ||||||||| | ||||||||    
T  35958999 aaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcatcatagaattt 35958912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 11366459 - 11366581
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||| ||||||||||||||  |   || ||| |||| | |||||||||  |||||||| ||  ||||||||||| ||||||| |||||| |||    
T  11366459 atactatgagggctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatt 11366558  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || |||| |||||| ||||||||    
T  11366559 cttatgatttcaccatagaattt 11366581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 43648323 - 43648411
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 98  Q
    ||||||||| ||||||||||||||||  |   || |||||||| |||||||||||  |||||||| ||  |||||||||||||||||||    
T  43648323 atactatgatgactgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaacttcacca 43648411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 19093461 - 19093411
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||| ||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttcctt 19093411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 31861943 - 31861898
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||| |||||| |||||||| |||||||| ||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattt 31861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 41643920 - 41643875
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||| |||||| ||| ||||||||||||| ||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaattt 41643875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 5881664 - 5881600
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttt 74  Q
    |||||| | ||||| |||||||||||  || ||| ||||||||||||||||||||||||| ||||    
T  5881664 atactaaggggactcaacttttgatgtcactgtacaaacagtggggtgttactcacaacactttt 5881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 43446463 - 43446507
Alignment:
Q  88 taacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||  |||||| ||||||||||||||||| ||||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaattt 43446507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 4015576 - 4015454
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  ||  || ||||||| ||||||||||||||||| |||| ||  |||||||||||||||| ||||||||| |||    
T  4015576 atactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaacttcatcagaaaagtcatt 4015477  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  4015476 ctcatgacttcaccatagaattt 4015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 48355057 - 48354927
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||| |||||||||||||||| |  ||| ||||| ||||||||||||||  |||||||| ||| ||||||||||||||||||| |||| | |||    
T  48355057 atactatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatcatt 48354958  T
Q  110 ctcatgacttcaccgtagaatttcccttgtt 140  Q
    |||||||||||||| |||||||| |||||||    
T  48354957 ctcatgacttcaccatagaattttccttgtt 48354927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 35844442 - 35844315
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||||| |||||||||||  || ||| |||||||| |||||||||||||||||||||  |  |||||||||||||||||||||||||| |||    
T  35844442 atactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaacttcaccagaaaagtcatt 35844343  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
     ||||||||||||| |||||||| ||||    
T  35844342 atcatgacttcaccatagaattttcctt 35844315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 51213041 - 51213163
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||| |||||||||||| |  ||| ||||||||||||||| ||||  |||||||||||  || |||||||||||||||| |||||| |||    
T  51213041 atactatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcatt 51213140  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||||||||||||| ||||||||    
T  51213141 ctcatgacttcaccatagaattt 51213163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 29099471 - 29099358
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| | |||||||||||| ||||  || ||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| |||    
T  29099471 atactaaggggactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcatt 29099372  T
Q  110 ctcatgacttcacc 123  Q
    || |||||||||||    
T  29099371 ctaatgacttcacc 29099358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 37157823 - 37157702
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 110  Q
    ||||||||| ||||||||||||||||| || ||| |||||||||||||||||||| ||| |||| ||  |||||||||||||||| || |||||  |||     
T  37157823 atactatgatgactgaacttttgatgccactgtacaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattt 37157724  T
Q  111 tcatgacttcaccgtagaattt 132  Q
    ||||||||||||| ||||||||    
T  37157723 tcatgacttcaccatagaattt 37157702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 37203183 - 37203061
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||| |||| ||  |||||||||||||||| || |||| | |||    
T  37203183 atactatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatt 37203084  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| ||||||||    
T  37203083 tttatgacttcaccatagaattt 37203061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 40936113 - 40935995
Alignment:
Q  5 tagataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 103  Q
    ||||| ||||||||||||||||||||||||||  || ||| ||||| || |||||||||| ||||| |||| ||  ||||||||||||||||||||||||    
T  40936113 tagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagtgttaacttcaccagaaaa 40936014  T
Q  104 gttattctcatgacttcac 122  Q
     | ||||||||||||||||    
T  40936013 atcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 22446138 - 22446251
Alignment:
Q  24 tgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattctcatgacttcac 122  Q
    |||||||||||||| || ||| || ||||||||||||||||| | |||||| || ||||| ||||||||||||| | |||||| ||| ||||||||||||    
T  22446138 tgaacttttgatgccactgtacaaaagtggggtgttactcactatatttttgatgatataatgttaacttcaccaaaaaaagtcattttcatgacttcac 22446237  T
Q  123 cgtagaatttccct 136  Q
    ||||||||||||||    
T  22446238 cgtagaatttccct 22446251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 11357424 - 11357535
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtgggg-tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttat 108  Q
    ||||||||| ||||||||||||||||| || ||| ||||||||||| |||||||||| | | |||| ||  |||||||||||||||||||||||||| ||    
T  11357424 atactatgatgactgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcat 11357523  T
Q  109 tctcatgacttc 120  Q
    ||||||||||||    
T  11357524 tctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 21193722 - 21193595
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||| ||| |||||||||||||||||  ||  || ||||||||||||||||||||||||| |||| ||   | ||||||||||||||||||||||| |||    
T  21193722 ataccatggggactgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacagtgttaacttcaccagaaaagtcatt 21193623  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||| ||| |||||||| ||||    
T  21193622 ctcatgactttaccatagaattttcctt 21193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 22451084 - 22450957
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||| ||  || |||||||| |||| ||||||| ||| |||| ||  ||||||||| |||||||||||||| | |||    
T  22451084 atactatggggactgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcatt 22450985  T
Q  110 ctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||||| |||||||| ||||    
T  22450984 ctcatgacttcaccatagaattttcctt 22450957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 11466940 - 11466818
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| ||||| |||||||||||| || ||| ||||||||||||||||||||||||| ||   ||  |||||| ||||||||| ||||||||| |||    
T  11466940 atactatggggactaaacttttgatgccactgtacaaacagtggggtgttactcacaacacttgcgatgttatagtcttaacttcatcagaaaagtcatt 11466841  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||| ||||||||| ||||||||    
T  11466840 ctcaagacttcaccatagaattt 11466818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 46297822 - 46297944
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||| | ||||||||||||||| || |  ||| ||||||||| ||||||||||| | |||||| ||  |||||||||||||||||||||||||| |||    
T  46297822 atactacggggactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcatt 46297921  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     ||||||||||||| ||||||||    
T  46297922 ttcatgacttcaccatagaattt 46297944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 34133047 - 34132940
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||| ||| ||     
T  34133047 tatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcg 34132948  T
Q  114 tgacttca 121  Q
    ||||||||    
T  34132947 tgacttca 34132940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 40552323 - 40552441
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    ||||||||||||||||||||||  |  ||| |||| |||| ||||||||||  |||||||| ||  ||||||||||||||| ||| |||||| |||||||    
T  40552323 tatgaggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctca 40552422  T
Q  114 tgacttcaccgtagaattt 132  Q
    |||||||||| ||||||||    
T  40552423 tgacttcaccatagaattt 40552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 44186561 - 44186683
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||| |||||||||||||||||  || ||| |||||| |||||||||||||||||| |||| ||  ||||||||||||||||||| |||| | |||    
T  44186561 atactatggggactgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcatt 44186660  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    |||  ||||||| | ||||||||    
T  44186661 ctctcgacttcatcatagaattt 44186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 45174621 - 45174497
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcaca--acattttttataatatagtgttaacttcaccagaaaagtta 107  Q
    |||||||| |||||||||||||||||| || ||| ||||||||  ||||||||||||  ||| |||| ||  ||||||||||||||||||| ||||||||    
T  45174621 atactatggggactgaacttttgatgctactgtacaaacagtgaagtgttactcacacaacacttttgatgttatagtgttaacttcaccaaaaaagtta 45174522  T
Q  108 ttctcatgacttcaccgtagaattt 132  Q
    ||||||  |||||||| || |||||    
T  45174521 ttctcacaacttcaccataaaattt 45174497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 4761709 - 4761843
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc--agaaaagtta 107  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||  ||||||||||  |||||||| ||| |||||| |||||||||||  | |||||| |    
T  4761709 atactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcaccaaaaaaaagtca 4761808  T
Q  108 ttctcatgacttcaccgtagaatttcccttgttac 142  Q
     |||||||| |||||| |||||||| |||||||||    
T  4761809 atctcatgaattcaccatagaattttccttgttac 4761843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 52040982 - 52041105
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttat 108  Q
    ||||||||| ||||||||||||||||| ||  || ||||| | |||| ||||||||| ||| |||| ||  |||||| ||||||||||||||||||| ||    
T  52040982 atactatgatgactgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcat 52041081  T
Q  109 tctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||  |||||||    
T  52041082 tctcatgacttcacctcagaattt 52041105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 3655262 - 3655384
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| |||| |||||||||||||||  |||||||||||  |||||||||||||| | || |||||| |||    
T  3655262 atactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaactttatcaaaaaagtcatt 3655361  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
     | ||||||||||| || |||||    
T  3655362 tttatgacttcaccataaaattt 3655384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 44891585 - 44891501
Alignment:
Q  47 acagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||| |||||||||||||| |||| ||  ||||||||||||||||||| |||||| ||| |||||||||||||||| |||||    
T  44891585 acagtgggatgttactcacaacacttttgatgttatagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattt 44891501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 7327542 - 7327665
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtg-ttaacttcaccagaaaagttat 108  Q
    |||||||| |||||||||||||||||  || ||| ||| | ||| ||||||||||||||| |||| ||  ||||||| |||||||||| | |||||| ||    
T  7327542 atactatggggactgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagtgtttaacttcactaaaaaagtcat 7327641  T
Q  109 tctcatgacttcaccgtagaattt 132  Q
    |||||| |||||||| ||||||||    
T  7327642 tctcataacttcaccatagaattt 7327665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 24489057 - 24489152
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttgtt 140  Q
    |||||||||  ||||||||||||||||||| ||| |||||| |||||||||| | |||| | ||| || ||||||||||||||| ||||| |||||    
T  24489057 aaacagtggaatgttactcacaacatttttaatactatagtcttaacttcacaaaaaaaatcattttcgtgacttcaccgtagattttcctttgtt 24489152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 39282764 - 39282642
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||||| |||||||||||||||| || ||| |||||||||||| ||||||||| || |||| ||  ||||||||||| || | ||||||| | ||| |||    
T  39282764 tatgagaactgaacttttgatgccactgtataaacagtggggtattactcaca-cagttttgatgttatagtgttaattttatcagaaaaatcattttca 39282666  T
Q  114 tgacttcaccgtagaatttccctt 137  Q
    |||||||||| |||||||| ||||    
T  39282665 tgacttcaccatagaattttcctt 39282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 26941320 - 26941442
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||| |||||||||||||||||||||  |   || ||||||||||||||||||||  | | |||| ||  ||||||||||||||||||| |||| | |||    
T  26941320 ataccatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaacttcaccaaaaaaatcatt 26941419  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || ||||||||||| ||||||||    
T  26941420 cttatgacttcaccatagaattt 26941442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 3362369 - 3362249
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttat 108  Q
    |||| ||||||| |||||||||||||| || ||| ||| |||||| |||||||||| | |||| | ||  |||||||||||||||||| | |||||||||    
T  3362369 ataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctatagtgttaacttcaccaaaaaaagttat 3362270  T
Q  109 tctcatgacttcaccgtagaa 129  Q
    | |||| | ||||||||||||    
T  3362269 tttcataatttcaccgtagaa 3362249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 33698263 - 33698186
Alignment:
Q  51 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| ||| |    ||||||||||||||||| ||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaattt 33698186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 11835706 - 11835788
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||| |||||||||||||||| ||||      |||||||||||||||||| |||| | ||||||||||||||||| ||||||||    
T  11835706 aaacagtgaggtgttactcacaacactttt-----gatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattt 11835788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 53229216 - 53229335
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtg-gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctc 112  Q
    ||||| ||||||||||||||||| || ||| ||||| || ||||||| ||||| ||| |||| ||  ||||||||||| |||||||||||| | ||| ||    
T  53229216 tatgatgactgaacttttgatgcaactgtacaaacattgagggtgttgctcactacacttttgatgctatagtgttaatttcaccagaaaaataattttc 53229315  T
Q  113 atgacttcaccgtagaattt 132  Q
    ||||||||||| || |||||    
T  53229316 atgacttcaccttaaaattt 53229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 2008046 - 2007964
Alignment:
Q  14 ctatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttca 95  Q
    ||||| ||| |||||||||||||| || ||| ||||||||||||||||||||||||| |||| |   ||||||||||||||||    
T  2008046 ctatggggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttaacgctatagtgttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 32373572 - 32373461
Alignment:
Q  25 gaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcacc 123  Q
    ||||||||||||| || ||| ||||||||| ||  ||||||||||| |||| ||  |||||||||||||| |   ||||||| ||||||||||||||| |    
T  32373572 gaacttttgatgccactgtacaaacagtggagt--tactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttcatc 32373475  T
Q  124 gtagaatttccctt 137  Q
     |||||||||||||    
T  32373474 atagaatttccctt 32373461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 40640634 - 40640684
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 40640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 47481603 - 47481502
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttcccttgttacaa 144  Q
    ||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| |||  | ||||  ||||||||||| || ||||| |||| ||| ||    
T  47481603 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcaccataaaattttcctttttaaaa 47481504  T
Q  145 tt 146  Q
    ||    
T  47481503 tt 47481502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 53811976 - 53812021
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattt 53812021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 20373356 - 20373468
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||| ||||| |||||||||||||||  |  ||| |||||||||||||||||||   |||||||| ||  |||||| |||||||||||| |||| | |||    
T  20373356 ataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatcatt 20373455  T
Q  110 ctcatgacttcac 122  Q
    || ||||||||||    
T  20373456 cttatgacttcac 20373468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 55343403 - 55343471
Alignment:
Q  69 attttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||| ||| |||||||||||||||| ||||||||| ||| || |||||||||| |||||||| ||||    
T  55343403 atttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttcctt 55343471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 38392628 - 38392678
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||||||||| |||||| ||||||||||||||||| || ||||||||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataatttccctt 38392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 33378841 - 33378969
Alignment:
Q  7 gataatactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 105  Q
    |||||||||||| |||||||||||||||||  || ||| ||| | ||||||  ||||||| ||| |||| ||| ||||||||| |||||||   ||||||    
T  33378841 gataatactatggggactgaacttttgatgtcaccgtacaaatattggggtactactcactacacttttgatactatagtgttgacttcac---aaaagt 33378937  T
Q  106 tattctcatgacttcaccgtagaatttccctt 137  Q
     |||||||| ||||  || |||||||| ||||    
T  33378938 cattctcataactttgccatagaattttcctt 33378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 54828796 - 54828882
Alignment:
Q  45 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||| |||||||||||||||  |||||||| ||  |||||||||||||| |||| |||| ||||| | ||||||||||| || |||||    
T  54828796 aaacggtggggtgttactcattacattttt-atgttatagtgttaactttaccaaaaaaattatttttatgacttcaccataaaattt 54828882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 25579851 - 25579733
Alignment:
Q  15 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 113  Q
    |||| |||||||||||||||||  || ||| ||| ||| |  ||||| |||||||| |||| ||  |||||| ||||||||||||||||| | |||||||    
T  25579851 tatggggactgaacttttgatgtcactgtataaatagtagaatgttattcacaacacttttgatgctatagtattaacttcaccagaaaaatcattctca 25579752  T
Q  114 tgacttcaccgtagaattt 132  Q
    | |||| ||| || |||||    
T  25579751 taacttaaccataaaattt 25579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 4556587 - 4556542
Alignment:
Q  88 taacttcaccagaaaagttattctcatgacttcaccgtagaatttc 133  Q
    ||||||||| |||||||| ||| ||||||||||||| |||||||||    
T  4556587 taacttcacgagaaaagtcattttcatgacttcaccatagaatttc 4556542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 32180747 - 32180792
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||    
T  32180747 ttaacttcactagaaaagtcattctcataacttcaccgtacaattt 32180792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 45879498 - 45879543
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||| ||||||||||| ||||||||||||||| | ||||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaattt 45879543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 46994780 - 46994837
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    |||||| |||||||||||| |||| | ||||| | |||||||||||||||||| ||||    
T  46994780 tatagtattaacttcaccaaaaaaatcattcttacgacttcaccgtagaattttcctt 46994837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 47930666 - 47930711
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattt 47930711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 53818509 - 53818554
Alignment:
Q  87 ttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||| | ||||||||||||||||| || |||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattt 53818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 2613967 - 2613895
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttca 121  Q
    |||| |||||||||||||||| ||||  |  |||||||||||||||| || |||||| ||| | |||||||||    
T  2613967 agtgtggtgttactcacaacacttttggtgttatagtgttaacttcaacaaaaaagtcattttaatgacttca 2613895  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 11872366 - 11872322
Alignment:
Q  88 taacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||| ||| |||||||||||| |||| |||||||||||||||||    
T  11872366 taactgcactagaaaagttattttcataacttcaccgtagaattt 11872322  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 29163893 - 29163841
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||||||| | ||| | ||||||||||| || |||||    
T  29163893 tatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattt 29163841  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 54505883 - 54505823
Alignment:
Q  51 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 111  Q
    ||||||||||||||  |||||||| ||  |||||||||||||||| || |||||| |||||    
T  54505883 tggggtgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtcattct 54505823  T

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Target: scaffold0009 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 42434 - 42351
Alignment:
Q  49 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  42434 agtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattt 42351  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 100876 - 100819
Alignment:
Q  80 tatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaatttccctt 137  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||| |||||||| ||||    
T  100876 tatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcctt 100819  T

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Target: scaffold0291 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 8012 - 7890
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    ||||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  ||| |||| ||  |||||||||||||||| || |||||| |||    
T  8012 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcatt 7913  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || || |||||||| ||||||||    
T  7912 cttataacttcaccatagaattt 7890  T

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Target: scaffold0061 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 44082 - 43960
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||||||||||| |||| |  ||| |||||  |||||||||||||  |||||||| ||| ||||| ||||||||||||| ||||||  ||    
T  44082 atactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtcttt 43983  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || | ||||||||| ||||||||    
T  43982 cttacgacttcaccatagaattt 43960  T

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Target: scaffold0017 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 154705 - 154827
Alignment:
Q  11 atactatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttatt 109  Q
    |||||||||||||||||||||| |||| |  ||| |||||  |||||||||||||  |||||||| ||| ||||| ||||||||||||| ||||||  ||    
T  154705 atactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtcttt 154804  T
Q  110 ctcatgacttcaccgtagaattt 132  Q
    || | ||||||||| ||||||||    
T  154805 cttacgacttcaccatagaattt 154827  T

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Target: scaffold0318 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 11990 - 11909
Alignment:
Q  52 ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagtta-ttctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||| |||| ||  ||| ||||||| |||||||||||||| | |||||||||||||||| ||||||||    
T  11990 ggggtgttactcacaacacttttaatgttatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaattt 11909  T

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Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 146117 - 146198
Alignment:
Q  51 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    ||||||||||||||  |||||||||||  |||| ||||||||| |||| |||| | ||||| ||||||||||||||||||||    
T  146117 tggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcaccgtagaattt 146198  T

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Target: scaffold0262 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 12137 - 12183
Alignment:
Q  86 gttaacttcaccagaaaagttattctcatgacttcaccgtagaattt 132  Q
    |||||||||||||||||||| |||||||| |||||| | ||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattt 12183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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