View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4546_low_11 (Length: 359)

Name: NF4546_low_11
Description: NF4546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4546_low_11
NF4546_low_11
[»] chr7 (34 HSPs)
chr7 (18-350)||(24427144-24427477)
chr7 (51-106)||(24304297-24304352)
chr7 (39-122)||(35195853-35195936)
chr7 (44-122)||(1649162-1649240)
chr7 (49-122)||(11808048-11808121)
chr7 (49-126)||(43635594-43635671)
chr7 (39-126)||(7162670-7162757)
chr7 (55-126)||(43712331-43712402)
chr7 (73-126)||(23799306-23799359)
chr7 (69-122)||(37410513-37410566)
chr7 (49-121)||(10474524-10474596)
chr7 (148-191)||(31327356-31327399)
chr7 (140-191)||(34000376-34000427)
chr7 (39-126)||(44409207-44409293)
chr7 (44-126)||(1513493-1513575)
chr7 (49-106)||(21285365-21285422)
chr7 (49-106)||(29658284-29658341)
chr7 (49-106)||(29779007-29779064)
chr7 (39-106)||(10020471-10020538)
chr7 (60-122)||(41465847-41465909)
chr7 (140-191)||(47499900-47499951)
chr7 (44-106)||(7392313-7392375)
chr7 (60-122)||(7465476-7465538)
chr7 (52-122)||(32814837-32814907)
chr7 (69-122)||(35683131-35683184)
chr7 (73-122)||(41913772-41913821)
chr7 (49-106)||(2366383-2366440)
chr7 (49-126)||(3481181-3481257)
chr7 (49-106)||(27047727-27047784)
chr7 (64-116)||(35293570-35293622)
chr7 (73-126)||(38032891-38032944)
chr7 (44-105)||(41853532-41853593)
chr7 (73-125)||(48447759-48447811)
chr7 (73-109)||(47355832-47355868)
[»] chr3 (38 HSPs)
chr3 (44-143)||(28951856-28951954)
chr3 (51-126)||(24160542-24160617)
chr3 (44-122)||(4010025-4010103)
chr3 (49-106)||(32508806-32508863)
chr3 (44-109)||(42665932-42665997)
chr3 (44-122)||(3973312-3973390)
chr3 (44-122)||(3996486-3996564)
chr3 (44-126)||(24130565-24130647)
chr3 (49-103)||(27066639-27066693)
chr3 (60-126)||(41430804-41430870)
chr3 (51-125)||(49146091-49146165)
chr3 (50-126)||(28962970-28963046)
chr3 (49-106)||(31902217-31902274)
chr3 (49-98)||(38414917-38414966)
chr3 (49-106)||(42271025-42271082)
chr3 (49-106)||(43774211-43774268)
chr3 (146-187)||(54225963-54226004)
chr3 (57-125)||(29098702-29098770)
chr3 (53-121)||(51412006-51412074)
chr3 (49-97)||(54983717-54983765)
chr3 (51-106)||(362969-363024)
chr3 (52-126)||(3461738-3461813)
chr3 (39-106)||(4045636-4045703)
chr3 (51-106)||(14868711-14868766)
chr3 (51-106)||(36331740-36331795)
chr3 (51-126)||(36842168-36842243)
chr3 (49-95)||(45431664-45431710)
chr3 (44-106)||(51493624-51493686)
chr3 (49-98)||(9167283-9167332)
chr3 (49-106)||(16277963-16278020)
chr3 (49-106)||(20623789-20623846)
chr3 (73-126)||(33533209-33533262)
chr3 (49-106)||(35483295-35483352)
chr3 (73-122)||(35540992-35541041)
chr3 (150-191)||(37495649-37495690)
chr3 (77-122)||(44592010-44592055)
chr3 (54-106)||(27119302-27119354)
chr3 (49-101)||(46328936-46328988)
[»] chr4 (50 HSPs)
chr4 (44-126)||(56867-56949)
chr4 (39-122)||(35230297-35230380)
chr4 (44-126)||(4419693-4419775)
chr4 (44-124)||(18740923-18741004)
chr4 (49-122)||(20610749-20610822)
chr4 (49-106)||(36008301-36008358)
chr4 (69-121)||(37728950-37729002)
chr4 (62-126)||(42432014-42432078)
chr4 (140-191)||(23915559-23915610)
chr4 (51-106)||(36954163-36954218)
chr4 (140-191)||(50442932-50442983)
chr4 (52-106)||(1589172-1589226)
chr4 (51-108)||(11084266-11084323)
chr4 (49-106)||(35333000-35333057)
chr4 (51-106)||(8690240-8690295)
chr4 (51-98)||(22751043-22751090)
chr4 (73-112)||(26276909-26276948)
chr4 (52-126)||(33944378-33944452)
chr4 (39-122)||(49039447-49039530)
chr4 (55-106)||(56531254-56531305)
chr4 (49-122)||(12820417-12820491)
chr4 (44-122)||(20166326-20166404)
chr4 (52-106)||(23661373-23661427)
chr4 (44-106)||(49319419-49319481)
chr4 (52-106)||(50657906-50657960)
chr4 (44-106)||(54264954-54265016)
chr4 (49-126)||(3465589-3465666)
chr4 (73-126)||(9172407-9172460)
chr4 (74-122)||(12775248-12775296)
chr4 (150-187)||(13138640-13138677)
chr4 (69-106)||(18497418-18497455)
chr4 (73-122)||(27921906-27921955)
chr4 (49-106)||(33076556-33076613)
chr4 (49-106)||(37032191-37032248)
chr4 (57-121)||(38228451-38228515)
chr4 (49-106)||(41003184-41003240)
chr4 (49-106)||(47017958-47018015)
chr4 (49-106)||(48512225-48512282)
chr4 (73-106)||(56314787-56314820)
chr4 (49-98)||(56555582-56555631)
chr4 (54-106)||(2565287-2565339)
chr4 (70-126)||(3465879-3465935)
chr4 (51-122)||(9692971-9693043)
chr4 (78-118)||(15185092-15185132)
chr4 (60-112)||(15507566-15507618)
chr4 (62-106)||(30032840-30032884)
chr4 (49-105)||(35122071-35122127)
chr4 (163-191)||(40546359-40546387)
chr4 (51-119)||(44272949-44273017)
chr4 (73-124)||(47890706-47890757)
[»] chr1 (41 HSPs)
chr1 (39-125)||(50199478-50199564)
chr1 (53-122)||(42908781-42908850)
chr1 (39-122)||(9768811-9768894)
chr1 (44-126)||(2903034-2903116)
chr1 (39-122)||(18003826-18003909)
chr1 (39-122)||(41677070-41677153)
chr1 (49-106)||(11405482-11405539)
chr1 (39-122)||(23750160-23750243)
chr1 (49-108)||(31965536-31965595)
chr1 (72-126)||(28417313-28417367)
chr1 (49-102)||(1031617-1031670)
chr1 (49-126)||(15774324-15774401)
chr1 (49-106)||(27745183-27745240)
chr1 (49-126)||(42149474-42149551)
chr1 (49-122)||(43837413-43837486)
chr1 (49-126)||(49251407-49251484)
chr1 (49-121)||(538341-538413)
chr1 (86-122)||(33176152-33176188)
chr1 (74-122)||(47645833-47645881)
chr1 (39-122)||(3341738-3341821)
chr1 (74-121)||(3569055-3569102)
chr1 (140-191)||(10587970-10588021)
chr1 (51-106)||(29491496-29491551)
chr1 (51-106)||(44949526-44949581)
chr1 (52-106)||(24662008-24662062)
chr1 (49-122)||(1721150-1721223)
chr1 (77-126)||(3140364-3140413)
chr1 (49-126)||(4288594-4288671)
chr1 (49-106)||(4354117-4354174)
chr1 (60-97)||(8310689-8310726)
chr1 (49-126)||(8364420-8364497)
chr1 (49-98)||(19424080-19424129)
chr1 (49-106)||(23930556-23930613)
chr1 (69-106)||(25152756-25152793)
chr1 (52-105)||(35619023-35619076)
chr1 (51-108)||(41182798-41182855)
chr1 (73-126)||(47141842-47141895)
chr1 (49-106)||(47939211-47939267)
chr1 (86-126)||(4605891-4605931)
chr1 (73-121)||(7906362-7906410)
chr1 (51-122)||(12553203-12553275)
[»] chr2 (44 HSPs)
chr2 (51-122)||(14307708-14307779)
chr2 (44-122)||(34830597-34830674)
chr2 (50-126)||(41699108-41699184)
chr2 (49-122)||(11133085-11133159)
chr2 (52-122)||(44132578-44132648)
chr2 (51-112)||(4529777-4529838)
chr2 (49-122)||(44721716-44721789)
chr2 (73-125)||(917327-917379)
chr2 (53-125)||(39118400-39118472)
chr2 (140-191)||(15873585-15873636)
chr2 (44-122)||(18065264-18065342)
chr2 (84-122)||(36386160-36386198)
chr2 (140-186)||(38763502-38763548)
chr2 (49-122)||(2114447-2114520)
chr2 (49-106)||(3037634-3037691)
chr2 (49-122)||(7086263-7086336)
chr2 (49-106)||(9520834-9520891)
chr2 (49-126)||(10262745-10262822)
chr2 (138-191)||(30832247-30832300)
chr2 (52-103)||(10767016-10767067)
chr2 (148-191)||(23492819-23492862)
chr2 (39-121)||(1244580-1244662)
chr2 (52-106)||(9796923-9796977)
chr2 (57-122)||(33816408-33816473)
chr2 (52-106)||(36426871-36426925)
chr2 (68-106)||(37065465-37065503)
chr2 (73-122)||(40688647-40688696)
chr2 (52-109)||(407502-407558)
chr2 (49-106)||(580795-580852)
chr2 (73-126)||(3179330-3179383)
chr2 (73-118)||(10602019-10602064)
chr2 (51-100)||(13975161-13975210)
chr2 (73-106)||(16261358-16261391)
chr2 (49-106)||(17154675-17154732)
chr2 (81-126)||(19352872-19352917)
chr2 (49-106)||(22297464-22297521)
chr2 (73-126)||(26807120-26807173)
chr2 (73-125)||(38557231-38557283)
chr2 (74-122)||(43936714-43936762)
chr2 (70-122)||(6496449-6496501)
chr2 (70-126)||(16028141-16028197)
chr2 (49-125)||(22538546-22538622)
chr2 (70-126)||(34376548-34376604)
chr2 (70-118)||(38293200-38293248)
[»] chr6 (34 HSPs)
chr6 (44-126)||(24256922-24257004)
chr6 (49-122)||(1488098-1488171)
chr6 (49-126)||(20858395-20858472)
chr6 (49-126)||(30668196-30668273)
chr6 (39-122)||(34524885-34524968)
chr6 (44-121)||(30833028-30833105)
chr6 (49-122)||(35190773-35190846)
chr6 (53-125)||(5544283-5544355)
chr6 (39-126)||(14949021-14949109)
chr6 (36-126)||(17347261-17347350)
chr6 (49-126)||(5288357-5288434)
chr6 (49-106)||(7374062-7374119)
chr6 (49-122)||(8176006-8176079)
chr6 (49-122)||(11520727-11520800)
chr6 (49-106)||(22389762-22389819)
chr6 (78-126)||(4844149-4844197)
chr6 (74-126)||(10442891-10442943)
chr6 (51-103)||(18631501-18631553)
chr6 (49-97)||(20568269-20568317)
chr6 (140-191)||(12339901-12339952)
chr6 (44-126)||(17305522-17305605)
chr6 (87-126)||(22730752-22730791)
chr6 (51-106)||(23771059-23771114)
chr6 (141-183)||(10864806-10864848)
chr6 (49-106)||(7563588-7563645)
chr6 (49-126)||(9491747-9491824)
chr6 (73-126)||(10373601-10373654)
chr6 (49-106)||(25020540-25020597)
chr6 (49-126)||(26528573-26528650)
chr6 (49-106)||(34396109-34396166)
chr6 (71-123)||(7425390-7425442)
chr6 (69-125)||(12284131-12284187)
chr6 (44-108)||(15063574-15063638)
chr6 (49-121)||(32540963-32541035)
[»] chr5 (36 HSPs)
chr5 (39-122)||(39955010-39955094)
chr5 (140-191)||(39213285-39213336)
chr5 (49-106)||(18872547-18872604)
chr5 (49-125)||(17557037-17557112)
chr5 (39-106)||(27006366-27006433)
chr5 (51-125)||(29144149-29144223)
chr5 (44-106)||(31556844-31556906)
chr5 (44-106)||(31907677-31907739)
chr5 (73-126)||(4985765-4985818)
chr5 (140-191)||(15105359-15105407)
chr5 (69-122)||(19608623-19608676)
chr5 (49-106)||(32158426-32158483)
chr5 (54-106)||(3102144-3102196)
chr5 (49-104)||(1244739-1244794)
chr5 (51-106)||(4674829-4674884)
chr5 (52-126)||(9408965-9409040)
chr5 (51-106)||(36045148-36045203)
chr5 (39-122)||(37986869-37986952)
chr5 (71-122)||(38040276-38040327)
chr5 (52-106)||(23925569-23925623)
chr5 (49-98)||(2029140-2029189)
chr5 (73-122)||(7147055-7147104)
chr5 (49-106)||(7234884-7234941)
chr5 (49-106)||(9963442-9963499)
chr5 (73-125)||(18755996-18756048)
chr5 (49-106)||(20945903-20945960)
chr5 (73-122)||(25660922-25660971)
chr5 (49-126)||(33800899-33800976)
chr5 (73-122)||(36742003-36742052)
chr5 (49-106)||(42260732-42260789)
chr5 (73-122)||(42781630-42781679)
chr5 (49-121)||(3535948-3536020)
chr5 (140-184)||(5731716-5731760)
chr5 (51-122)||(6806654-6806726)
chr5 (73-109)||(13862148-13862184)
chr5 (44-104)||(38129020-38129080)
[»] scaffold0070 (1 HSPs)
scaffold0070 (51-106)||(12591-12646)
[»] chr8 (40 HSPs)
chr8 (44-126)||(17467284-17467365)
chr8 (49-126)||(7345434-7345511)
chr8 (49-106)||(43468717-43468774)
chr8 (39-122)||(220364-220447)
chr8 (39-122)||(689519-689602)
chr8 (39-122)||(733987-734070)
chr8 (39-122)||(857883-857966)
chr8 (52-102)||(11172365-11172415)
chr8 (140-193)||(5879113-5879166)
chr8 (49-106)||(30542790-30542847)
chr8 (51-106)||(14012638-14012693)
chr8 (51-106)||(35301177-35301232)
chr8 (49-122)||(4798553-4798626)
chr8 (52-106)||(25139902-25139956)
chr8 (49-126)||(27822076-27822153)
chr8 (149-187)||(27870813-27870851)
chr8 (73-126)||(45258078-45258131)
chr8 (49-106)||(1032973-1033029)
chr8 (49-106)||(6978846-6978903)
chr8 (49-106)||(8034556-8034613)
chr8 (69-98)||(8862130-8862159)
chr8 (49-106)||(10199754-10199811)
chr8 (49-106)||(13762524-13762581)
chr8 (49-106)||(15042377-15042434)
chr8 (73-122)||(16621554-16621603)
chr8 (73-122)||(26657866-26657915)
chr8 (49-126)||(26703902-26703979)
chr8 (141-182)||(27134490-27134531)
chr8 (49-106)||(30942611-30942668)
chr8 (49-106)||(33570441-33570498)
chr8 (73-125)||(36540297-36540349)
chr8 (74-122)||(216184-216232)
chr8 (74-122)||(692744-692792)
chr8 (74-122)||(696953-697001)
chr8 (74-122)||(729807-729855)
chr8 (74-122)||(853702-853750)
chr8 (51-126)||(2696538-2696614)
chr8 (151-191)||(12899911-12899951)
chr8 (70-98)||(30199728-30199756)
chr8 (140-184)||(41687637-41687681)
[»] scaffold0712 (1 HSPs)
scaffold0712 (54-122)||(4530-4598)
[»] scaffold0709 (1 HSPs)
scaffold0709 (54-122)||(4550-4618)
[»] scaffold0129 (1 HSPs)
scaffold0129 (73-109)||(7079-7115)
[»] scaffold0308 (1 HSPs)
scaffold0308 (51-106)||(7102-7157)
[»] scaffold0002 (1 HSPs)
scaffold0002 (52-106)||(451390-451444)
[»] scaffold0533 (1 HSPs)
scaffold0533 (49-106)||(9352-9409)
[»] scaffold0191 (1 HSPs)
scaffold0191 (49-106)||(16873-16929)
[»] scaffold0168 (1 HSPs)
scaffold0168 (69-122)||(34065-34118)
[»] scaffold0013 (1 HSPs)
scaffold0013 (54-126)||(245473-245545)


Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 350
Target Start/End: Complemental strand, 24427477 - 24427144
Alignment:
Q  18 agtctagtggttaaattttttacctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaa 117  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  24427477 agtctagtggctaaattttttacctatttcaaggtgaataaatggggtattcggggttcgaaccttgacccctgcatataacaatgcatgtctctgccaa 24427378  T
Q  118 ctgagttattatgcacggagactatttatcccttttataataccaatacaatatttatt----attcttttccactaaaactcaactggacacctaattt 213  Q
    |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||| ||  |||||||||||||    
T  24427377 ctgagttat---gcacggagactatttatcccttttataataccaatacaatatttatttattattcttttccactaaaacttaaaaggacacctaattt 24427281  T
Q  214 aaaatggagggagtaatacaaagcttacaaatgtacttgcatattatcctaaatgagatcatcatataagcaacaaaattcaaataaagtcgtcgtcgga 313  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  24427280 aaaacggagggagtaatacaaagcttacaaatgtacttgcatattatcctaaatgagatcatcatataagcaacaaaattcaaatcaagtcgccgtcgga 24427181  T
Q  314 tatgaaattaatctttacaaacttggccgacctatgc 350  Q
    |||||| ||||||||||| |||||||||||| |||||    
T  24427180 tatgaagttaatctttaccaacttggccgacatatgc 24427144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 24304297 - 24304352
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  24304297 gtgaataaatggggtgttcggagttcgaaccccgacccctgcatataataatgcat 24304352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 35195936 - 35195853
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| ||||||||||||||||| ||||| |||||||||| | ||||||||||||| ||||||| || || |||||||||    
T  35195936 acctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgag 35195853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 1649240 - 1649162
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||||||||| |||||| | | | |||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  1649240 tttcaaggtgaataagtggggtgtccagggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgag 1649162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 11808121 - 11808048
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| |||||| | ||| |||||||||| ||||||||||||||||||||||| || ||||||| ||||    
T  11808121 aggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctaccaattgag 11808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 43635671 - 43635594
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| | ||| |||||||||| |||| |||||||||||||||||| | ||| |||||||||||||    
T  43635671 aggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttctgccaactgagttat 43635594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 7162670 - 7162757
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||| || ||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||| || ||||  |||||||    
T  7162670 acctttttcaagatgaataagtggaatattcagagttcgaaccccgacccctgcatataacaatgcatatccctgccaatcgagttat 7162757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 43712331 - 43712402
Alignment:
Q  55 ataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||| ||  |||||||||| |||||||| |||||||||||||| || ||||||||||||||||    
T  43712331 ataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtccctaccaactgagttat 43712402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 23799359 - 23799306
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||| || ||||||||||||||||||||||| ||||| |||||||||||||    
T  23799359 gttcgaatcccgacccctgcatataacaatgcatgtctctgccaactgagttat 23799306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 37410513 - 37410566
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||||| |||||||||||||||||||||||| ||  |||||||||||    
T  37410513 cggagttcgaaccttgacccctgcatataacaatgcatgtccttaccaactgag 37410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 10474524 - 10474596
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||||||||| || ||| | ||| | |||||||| |||||||||||||||||||| || ||||||||||||||    
T  10474524 aggtgaataagtgaggtgtccgggggtcgaaccccgacccctgcatataacaatgtatgtctctaccaactga 10474596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 31327356 - 31327399
Alignment:
Q  148 ccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  31327356 ccttttataatacaaatacaacatttattattcttttccactaa 31327399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 34000376 - 34000427
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  34000376 tatttatcatttttataatatcaatacaacatttattattcttttccactaa 34000427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 44409293 - 44409207
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||| |||||||||| |||||| ||||| |||||||||| ||||| ||||||||| ||||||| || || | |||||||||||    
T  44409293 acctttttcaaggtgaataagtggggtgttcgg-gttcgaaccccgacccttgcatataataatgcatgtccctgctaactgagttat 44409207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 1513575 - 1513493
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||| |||||| ||||| |||||||||   |||||| ||||||||||||||| || || |||||||| ||||    
T  1513575 tttcaaggtgaataagtggggtgttcggtgttcgaacctcaacccctacatataacaatgcatgtccctgccaactgatttat 1513493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 21285365 - 21285422
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | |||||||||||||||||||||    
T  21285365 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcat 21285422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 29658284 - 29658341
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | |||||||||||||||||||||    
T  29658284 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcat 29658341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 29779064 - 29779007
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| ||  ||||||||||||||||| | ||||||||||||||| |||||||    
T  29779064 aggtgaataagtgaagtattcggagttcgaactccgacccctgcatataataatgcat 29779007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 10020471 - 10020538
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||| || ||||||| |||| | ||||| ||||||||||  ||||||||||||||||||||||    
T  10020471 acctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcat 10020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 41465909 - 41465847
Alignment:
Q  60 tggggtattcggagttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    |||||| | ||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  41465909 tggggtgtccggagttcgaaccctgacccctgcatataa-tatgcaatatccctaccaactgag 41465847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 47499951 - 47499900
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||||  ||||||||||| ||||||| |||||||||| |||||||||||    
T  47499951 tatttatcaattttataatacaaatacaacatttattatttttttccactaa 47499900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 7392313 - 7392375
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||| |||||| ||||| |||| |||||  ||| ||||||||||||||||||    
T  7392313 tttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcat 7392375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 7465538 - 7465476
Alignment:
Q  60 tggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||| | ||| |||||||||| | ||||||||||||| ||||||| ||||| |||||||||    
T  7465538 tggggtgtccggggttcgaaccccggcccctgcatataataatgcatgtctctgccaactgag 7465476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 32814907 - 32814837
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||| |||||| | |||  ||||||| | ||||||||||||||| ||||||| || ||||||||||||    
T  32814907 tgaataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccctaccaactgag 32814837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 35683131 - 35683184
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||    
T  35683131 cggagttcgaaccccgacccctgcatataa-aatgcgatatccctaccaactgag 35683184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 41913772 - 41913821
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  41913772 gttcgaaccctgacccctgcatataa-aatgcaatatctctatcaactgag 41913821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 2366440 - 2366383
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| |   |||||||||||| ||||||||||||||| |||||||    
T  2366440 aggtgaataagtggggtgtctagagttcgaaccccgacccctgcatataataatgcat 2366383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 3481181 - 3481257
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| || ||||| |||||||||||||| | | ||||||||||||||||||  ||  ||||| |||||||||    
T  3481181 aggtgaataagtgaggtat-cggagttcgaaccccggctcctgcatataacaatgcacgtccataccacctgagttat 3481257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 27047727 - 27047784
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||||| | ||  |||||||||| | ||||||||||||| |||||||    
T  27047727 aggtgaataaatggggtgtccgaggttcgaaccccggcccctgcatataataatgcat 27047784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 35293570 - 35293622
Alignment:
Q  64 gtattcggagttcgaaccctgacccctgcatataacaatgc-atatctctacca 116  Q
    ||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||    
T  35293570 gtattcggaattcgaaccctgacccttgcatataa-aatgcaatatctctacca 35293622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 38032891 - 38032944
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| | |||||| |||||||||||||| || || |||||||||||||    
T  38032891 gttcgaaccccggcccctgtatataacaatgcatgtccctgccaactgagttat 38032944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 41853532 - 41853593
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca 105  Q
    |||| ||| |||||| |||||||||||| |||||||| | | || |||||||||||||||||    
T  41853532 tttcaaggagaataagtggggtattcggggttcgaactccggcctctgcatataacaatgca 41853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 48447811 - 48447759
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgagtta 125  Q
    |||||||||| | ||||||||||||| ||||| |||||||||||||||||||||    
T  48447811 gttcgaaccccggcccctgcatataa-aatgcgatatctctaccaactgagtta 48447759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 47355868 - 47355832
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatc 109  Q
    |||||||||| | ||||||||||||||||||||||||    
T  47355868 gttcgaaccccggcccctgcatataacaatgcatatc 47355832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 28951954 - 28951856
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttattatgcacggagactatt 143  Q
    |||| |||||||||| |||||| ||||| |||||||||||||||||||||||||| ||||||| | ||| |||||||||||||  | |||||||||||||    
T  28951954 tttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatgct-cacggagactatt 28951856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 24160542 - 24160617
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||| ||| || | ||| |||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||    
T  24160542 gtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctctgccaactgagttat 24160617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 4010025 - 4010103
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||||||||||||||||| ||||| |||| |||   | ||||||||||||||||||||| || ||||||||||||    
T  4010025 tttcaaggtgaataaatggggtgttcggggttcaaactgcggcccctgcatataacaatgcatgtccctaccaactgag 4010103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 32508806 - 32508863
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||||||| |||||||    
T  32508806 aggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcat 32508863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 42665932 - 42665997
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatc 109  Q
    |||| |||||||||| |||||| | |||||||||||| | ||||||||||| ||||||||||||||    
T  42665932 tttcaaggtgaataagtggggtgtccggagttcgaactccgacccctgcatttaacaatgcatatc 42665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 3973390 - 3973312
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||||||||||||||||| | ||| |||| || |  | ||||||||||||||||||||| || ||||||||||||    
T  3973390 tttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgag 3973312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 3996486 - 3996564
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||||||||||||||||| | ||| |||| || |  | ||||||||||||||||||||| || ||||||||||||    
T  3996486 tttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgag 3996564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 24130647 - 24130565
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||| |||||| | ||| |||| ||||| | |||||||||||||||||| || || || |||||||||||||    
T  24130647 tttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtccctgccaactgagttat 24130565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 27066693 - 27066639
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatg 103  Q
    |||||||||| |||||| | ||| |||||||||||||||||||||||||| ||||    
T  27066693 aggtgaataagtggggtgtccggggttcgaaccctgacccctgcatataataatg 27066639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 41430804 - 41430870
Alignment:
Q  60 tggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||| ||||||||||| || | ||||  ||||||||| |||||||||| ||||||||||||||||    
T  41430804 tggggtgttcggagttcgtactccgacctttgcatataataatgcatatccctaccaactgagttat 41430870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 49146165 - 49146091
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    |||||||||||||||    
T  49146165 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagtta 49146091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 28963046 - 28962970
Alignment:
Q  50 ggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgagttat 126  Q
    ||||||||| |||| | |||||  ||||||||| |||||||| ||||||||||||| |||| ||||||||||||||||    
T  28963046 ggtgaataagtgggatgttcgggattcgaaccccgacccctgtatataacaatgcattatc-ctaccaactgagttat 28962970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 31902217 - 31902274
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | |||||||||||||| ||||||| ||||||| |||||||    
T  31902217 aggtgaataagtggggtgtccggagttcgaaccccgacccctacatataaaaatgcat 31902274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 38414966 - 38414917
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataa 98  Q
    |||||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  38414966 aggtgaataagtggggtgttcagagttcaaaccctgacccctgcatataa 38414917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 42271025 - 42271082
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| | |||| | |||||||||||||| | |||||||||||||||||||||    
T  42271025 aggtgaataagtagggtgtccggagttcgaaccccggcccctgcatataacaatgcat 42271082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 43774268 - 43774211
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| |  || |||||||||| |||||||||||||||||||||||    
T  43774268 aggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcat 43774211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 54226004 - 54225963
Alignment:
Q  146 tcccttttataataccaatacaatatttattattcttttcca 187  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  54226004 tcccttttacaataccaatacaacatttattattcttttcca 54225963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 29098770 - 29098702
Alignment:
Q  57 aaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    ||||||||| | ||| |||||||||| ||||||||||||||| |    |||||||||||||||||||||    
T  29098770 aaatggggtgtccggggttcgaaccccgacccctgcatataatatacaatatctctaccaactgagtta 29098702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 51412006 - 51412074
Alignment:
Q  53 gaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||||| |||||||| |||  ||||||||| ||| ||||||||||||||||||| || || ||||||||    
T  51412006 gaataagtggggtatccgggattcgaaccccgactcctgcatataacaatgcatgtccctgccaactga 51412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 54983717 - 54983765
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatata 97  Q
    ||||||||||||||||| | ||| |||||||||| ||||||||||||||    
T  54983717 aggtgaataaatggggtgtccggggttcgaaccccgacccctgcatata 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 363024 - 362969
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||||| ||| |||||||| | ||||||||||||||| |||||||    
T  363024 gtgaataagtggggtatccggggttcgaactccgacccctgcatataataatgcat 362969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 3461738 - 3461813
Alignment:
Q  52 tgaataaatgggg-tattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||||||||| | ||||| ||||||||||  |||||| ||||||||||||||| || ||  ||||||||||||    
T  3461738 tgaataaatgggggtgttcggggttcgaaccccaacccctacatataacaatgcatgtccctgtcaactgagttat 3461813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 4045636 - 4045703
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||| || ||||||| |||||| | || ||||||||||  |||||||||||||||||||||||    
T  4045636 acctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcat 4045703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 14868766 - 14868711
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| ||||| |||||||||| | ||||||||||||| |||||||    
T  14868766 gtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcat 14868711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 36331740 - 36331795
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  36331740 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 36331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 36842243 - 36842168
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||| |||| | | ||| |||||||||| |||||||| || ||| |||||||||| ||| ||||||||||||    
T  36842243 gtgaataagtgggatgtacggggttcgaaccccgacccctgaatttaaaaatgcatatccctatcaactgagttat 36842168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 45431710 - 45431664
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcata 95  Q
    |||||||||| |||||| | ||| |||||||||||||||||||||||    
T  45431710 aggtgaataagtggggtgtccggggttcgaaccctgacccctgcata 45431664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 51493686 - 51493624
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||| ||| |||||  ||||| |||||||||| ||||| |||||| ||||||||||    
T  51493686 tttcgaggtgattaagtggggcgttcggggttcgaaccccgacccttgcataaaacaatgcat 51493624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9167283 - 9167332
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataa 98  Q
    |||||||||| |||||| | || ||||||||||| |||||||||||||||    
T  9167283 aggtgaataactggggtgtccgaagttcgaaccccgacccctgcatataa 9167332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 16277963 - 16278020
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||| | | ||||||||||| || ||||||||||||||| |||||||    
T  16277963 aggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcat 16278020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 20623789 - 20623846
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | | ||||||||||||||| |||| ||||||| |||||||    
T  20623789 aggtgaataagtggggtgtcctgagttcgaaccctgatccctacatataataatgcat 20623846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 33533262 - 33533209
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||||||  ||| || ||||||||||||||| ||||| |||||||||||||    
T  33533262 gttcgaaccccaaccactacatataacaatgcatgtctctgccaactgagttat 33533209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 35483352 - 35483295
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | |||  ||||||||| ||||||||||||||| |||||||    
T  35483352 aggtgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcat 35483295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 35541041 - 35540992
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||  |||||| ||||||| |||||||||| ||||||||||||    
T  35541041 gttcgaaccccaacccctacatataaaaatgcatatccctaccaactgag 35540992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 37495690 - 37495649
Alignment:
Q  150 ttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||| || ||||||||||||||||||||||||| |||||    
T  37495690 ttttatagtatcaatacaatatttattattcttttcgactaa 37495649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 44592055 - 44592010
Alignment:
Q  77 gaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||||||||||||||||||||||||| |  ||||||||||||    
T  44592055 gaactctgacccctgcatataacaatgcatgttcctaccaactgag 44592010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 27119354 - 27119302
Alignment:
Q  54 aataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||| |||||| |||||  ||||||||| |||| ||||||||||||||||||    
T  27119354 aataagtggggtgttcgggattcgaaccccgacctctgcatataacaatgcat 27119302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 46328936 - 46328988
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaa 101  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||||||    
T  46328936 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaa 46328988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 56867 - 56949
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| ||||||||||||||||| |||||||||||||| | | ||| ||||||||||||||||| || || |||||||||||||    
T  56867 tttcaaggtgaataaatggggtgttcggagttcgaactccggcccttgcatataacaatgcatgtccctgccaactgagttat 56949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 35230297 - 35230380
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||| |||| ||||| |||||| | ||  |||||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  35230297 acctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatgcatatccctaccaactgag 35230380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 4419693 - 4419775
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| ||||||||||||| ||| ||| | ||| |||||| | ||||||||||||||||||||| |||||  ||||||||||||    
T  4419693 tttcaaggtgaataaatgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtctctgacaactgagttat 4419775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 18740923 - 18741004
Alignment:
Q  44 tttcgaggtgaataaatgggg-tattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtt 124  Q
    |||| |||||||||| ||||| | || || |||||||| | ||||||||||||||| ||||||||||||| |||||||||||    
T  18740923 tttcaaggtgaataagtgggggtgtttggggttcgaactccgacccctgcatataataatgcatatctctgccaactgagtt 18741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 20610822 - 20610749
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| |||| | | |||||||||||||| | ||||||||||||||||||||| || || |||||||||    
T  20610822 aggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgag 20610749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 36008358 - 36008301
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||||| | |||||||||||||||||||||    
T  36008358 aggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcat 36008301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 37729002 - 37728950
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||||||||||||  ||||||||||||||| |||||||||| |||||||||||    
T  37729002 cggagttcgaacctcgacccctgcatataataatgcatatccctaccaactga 37728950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 42432078 - 42432014
Alignment:
Q  62 gggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| ||||||||||||||||  | |||||||||||||||||||| || || |||||||||||||    
T  42432078 gggtgttcggagttcgaaccccaatccctgcatataacaatgcatgtccctgccaactgagttat 42432014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 23915610 - 23915559
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  23915610 tatttgtcccttttacaataccaatacaacatttattattcttttctactaa 23915559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 36954218 - 36954163
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  36954218 gtgaataaatggggtgtccggggttcgaaccccgacccctgcatataataatgcat 36954163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 50442932 - 50442983
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||| ||||||| |||||| |||||||| ||||||||||||||||||||||    
T  50442932 tatttgtccctttaataatatcaatacaacatttattattcttttccactaa 50442983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 1589172 - 1589226
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||| | | ||| ||||||| ||||||||||||||||||||||||||    
T  1589172 tgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatgcat 1589226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 11084266 - 11084323
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatat 108  Q
    ||||||||||||||| | | ||||||||| || ||||||||||||||| |||||||||    
T  11084266 gtgaataaatggggtgtcccgagttcgaatcccgacccctgcatataaaaatgcatat 11084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 35333000 - 35333057
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||||| |||||||||||||| | | || |||||||||| |||||||    
T  35333000 aggtgaataaatggggtgttcggagttcgaactccggccactgcatataataatgcat 35333057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 8690295 - 8690240
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  8690295 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 8690240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 22751090 - 22751043
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataa 98  Q
    ||||||||||||||| ||||| ||| |||||| |||||||||||||||    
T  22751090 gtgaataaatggggtgttcggggtttgaaccccgacccctgcatataa 22751043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 112
Target Start/End: Original strand, 26276909 - 26276948
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctct 112  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  26276909 gttcgaaccctgactcatgcatataacaatgcatatctct 26276948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 33944378 - 33944452
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgagttat 126  Q
    ||||||| ||| |||||||  |||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||    
T  33944378 tgaataagtggagtattcgaggttcgaaccccggcccctgcatataataatgcattatc-ctaccaactgagttat 33944452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 49039447 - 49039530
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | ||| ||||||||||    |||||||||||||||||||| || || |||||||||    
T  49039447 acctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgag 49039530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 56531254 - 56531305
Alignment:
Q  55 ataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||| | |||||||||||||| | |||||||||||||||||||||    
T  56531254 ataagtggggtgtccggagttcgaaccccggcccctgcatataacaatgcat 56531305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 12820417 - 12820491
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgag 122  Q
    |||||||||| |||||| | | | |||| ||||| |||||||||||||||||||||| | ||||| |||||||||    
T  12820417 aggtgaataagtggggtgtccagggttctaaccccgacccctgcatataacaatgcattgtctctgccaactgag 12820491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 20166404 - 20166326
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||| |||||| ||||||||  || |||||||||  | ||||||||||||||||||||| || || |||||||||    
T  20166404 tttcaaggagaataagtggggtatctggggttcgaacctcggcccctgcatataacaatgcatgtccctgccaactgag 20166326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 23661373 - 23661427
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||||| ||||| ||||||||||  |||||| |||||||||||||||    
T  23661373 tgaataagtggggtgttcggggttcgaacccctacccctacatataacaatgcat 23661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 49319481 - 49319419
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||| |||||| | ||| ||| |||||| ||||||||||||||| |||||||    
T  49319481 tttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcat 49319419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 50657960 - 50657906
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||| | || |||||||||||| |||||||||||||||| |||||||    
T  50657960 tgaataagtgggatgtttggagttcgaaccatgacccctgcatataataatgcat 50657906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 54265016 - 54264954
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||| || ||| ||||  ||| |||||||||||||| |||||||||||||||    
T  54265016 tttcaaggtgaataagtgaggtgttcgaggtttgaaccctgacccctacatataacaatgcat 54264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 3465666 - 3465589
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| | ||| |||||||| | | ||||||||||||| |||||||    ||||||||||||||||    
T  3465666 aggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagttat 3465589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 9172407 - 9172460
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| ||||||||||||||| |||||||    ||||||||||||||||    
T  9172407 gttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagttat 9172460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 12775248 - 12775296
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  12775248 ttcgaaccctgacccctgcatataa-aatgcaatatccctaccaactgag 12775296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 13138640 - 13138677
Alignment:
Q  150 ttttataataccaatacaatatttattattcttttcca 187  Q
    |||||||||||||||| || ||||||||||||||||||    
T  13138640 ttttataataccaatataacatttattattcttttcca 13138677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 18497455 - 18497418
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  18497455 cggagttcgaaccccaacccctgcatataacaatgcat 18497418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 27921955 - 27921906
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| | ||||||||||||| ||||||| || ||||||||||||    
T  27921955 gttcgaaccccggcccctgcatataataatgcatgtccctaccaactgag 27921906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 33076613 - 33076556
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| | |||| | ||| |||||||||| ||||||||||||||| |||||||    
T  33076613 aggtgaataagtagggtgtccggggttcgaaccccgacccctgcatataataatgcat 33076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 37032191 - 37032248
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| ||||||| || ||||||||||||||| |||||||    
T  37032191 aggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcat 37032248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 38228515 - 38228451
Alignment:
Q  57 aaatggggtattcggagttcgaaccctgacccctgcatataacaatgc-atatctctaccaactga 121  Q
    ||||||||| |||||||||||||||| | ||||| |||||||| |||| ||||| |||||||||||    
T  38228515 aaatggggtgttcggagttcgaaccccggcccctacatataac-atgcaatatccctaccaactga 38228451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 41003184 - 41003240
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | |||||||||||| |  ||||||||||||||||||||||    
T  41003184 aggtgaataagtggggtgtccggagttcgaactca-acccctgcatataacaatgcat 41003240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 47017958 - 47018015
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||||    
T  47017958 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcat 47018015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 48512282 - 48512225
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| || ||||||||  |||||||||||||||||||||    
T  48512282 aggtgaataagtggggtgtccggggtacgaaccctagcccctgcatataacaatgcat 48512225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 56314820 - 56314787
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||||||||||||||||| |||||||    
T  56314820 gttcgaaccctgacccctgcatataataatgcat 56314787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 56555631 - 56555582
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataa 98  Q
    |||||||||| |||||| ||||  |||||||||| |||||||||||||||    
T  56555631 aggtgaataagtggggtgttcgaggttcgaaccccgacccctgcatataa 56555582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 2565339 - 2565287
Alignment:
Q  54 aataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||| |||||| |||||  ||||||| | |||||||||||||||||||||||    
T  2565339 aataagtggggtgttcgggattcgaactccgacccctgcatataacaatgcat 2565287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 3465879 - 3465935
Alignment:
Q  70 ggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| ||||||| |||||||||| ||||||| ||| |  ||||||||||||    
T  3465879 ggagttcgaatcctgacctctgcatataataatgcatgtctttgtcaactgagttat 3465935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 9693043 - 9692971
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgag 122  Q
    |||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||| |||| || |||||||||    
T  9693043 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatccctgccaactgag 9692971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 15185132 - 15185092
Alignment:
Q  78 aaccctgacccctgcatataacaatgcatatctctaccaac 118  Q
    ||||| |||||||||||||||||||||||||| || |||||    
T  15185132 aaccccgacccctgcatataacaatgcatatccctgccaac 15185092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 15507618 - 15507566
Alignment:
Q  60 tggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctct 112  Q
    |||||| ||||| ||||||||||  |||||||||||||| |||| ||||||||    
T  15507618 tggggtgttcggggttcgaaccccaacccctgcatataataatgtatatctct 15507566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 30032884 - 30032840
Alignment:
Q  62 gggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||||||||| || || |||||||||||||||||    
T  30032884 gggtgttcggagttcgaaccccgatccatgcatataacaatgcat 30032840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 35122127 - 35122071
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca 105  Q
    ||||||||||||||||| |||||  |||||| |  ||||||| ||||||||||||||    
T  35122127 aggtgaataaatggggtgttcgggattcgaatctcgacccctacatataacaatgca 35122071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 40546387 - 40546359
Alignment:
Q  163 atacaatatttattattcttttccactaa 191  Q
    |||||||||||||||||||||||||||||    
T  40546387 atacaatatttattattcttttccactaa 40546359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 44273017 - 44272949
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaact 119  Q
    |||||||| |||||||| ||  |||||||| | ||||||||||||||| ||||||| ||  ||||||||    
T  44273017 gtgaataagtggggtatccgaggttcgaactccgacccctgcatataataatgcatgtccataccaact 44272949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 47890757 - 47890706
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgagtt 124  Q
    |||||||||| |||||||||||||||  |||| ||||||||||||||||||||    
T  47890757 gttcgaaccccgacccctgcatataa-tatgcaatatctctaccaactgagtt 47890706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 50199478 - 50199564
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||| |||| |||||||||| |||||| | ||| |||||||||| | ||||||||||||||||||||| || |||||||||||||||    
T  50199478 acctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgtccctaccaactgagtta 50199564  T

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Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 42908850 - 42908781
Alignment:
Q  53 gaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||||||| || || |||||||||    
T  42908850 gaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgag 42908781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 9768811 - 9768894
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | ||| |||||||||| ||||||||||||||||||||||| || || |||||||||    
T  9768811 acctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgag 9768894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 2903034 - 2903116
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||| |||||| ||||| |||||||||| |||| |||||||||||||||||| || ||  ||||||||||||    
T  2903034 tttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtccctggcaactgagttat 2903116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 18003909 - 18003826
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| ||||| | |||||||| | ||||||||||||||||||||| || || |||||||||    
T  18003909 acctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccctgccaactgag 18003826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 41677153 - 41677070
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | |||||||||||||| |||||| |||||||| |||| || ||||| |||||||||    
T  41677153 acctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgccaactgag 41677070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 11405539 - 11405482
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| |||||||||||||||||||||||    
T  11405539 aggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 11405482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 23750243 - 23750160
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| || ||||||| |||||| ||| | ||| |||||| ||||| || ||||||||||||||||| ||||||||||||    
T  23750243 acctttttcaagatgaataagtggggtgttcagggtttgaaccccgacccatgtatataacaatgcatatccctaccaactgag 23750160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 31965595 - 31965536
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatat 108  Q
    |||||||||| || ||| |||||||||||||||| || |||||||||||| |||||||||    
T  31965595 aggtgaataagtgaggtgttcggagttcgaaccccgatccctgcatataataatgcatat 31965536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 28417313 - 28417367
Alignment:
Q  72 agttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| ||||| |||||||||| ||||||| ||||| |||||||||||||    
T  28417313 agttcgaaccttgacctctgcatataagaatgcatgtctctgccaactgagttat 28417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 1031670 - 1031617
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaat 102  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| |||||||||||    
T  1031670 aggtgaataagtggggtgttcggggttcgaactctgacccctacatataacaat 1031617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 15774324 - 15774401
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| | ||| |||||||||| ||||||| ||||||| |||||||    ||||||||||||||||    
T  15774324 aggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactgagttat 15774401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 27745240 - 27745183
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||||| | ||| |||||||||| || |||||||||||| |||||||    
T  27745240 aggtgaataaatggggtgtccggggttcgaaccccgatccctgcatataataatgcat 27745183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 42149551 - 42149474
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||||| | || || |||||||||||   || ||||||||||||||||| ||||||||  ||||||||||||    
T  42149551 aggtgaataaatagagtgtttggagttcgaactacgatccctgcatataacaatgaatatctctgtcaactgagttat 42149474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 43837413 - 43837486
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||||||||| | | | |||||||||| |||||||||||| || ||||||| |  ||||||||||||    
T  43837413 aggtgaataaatggggtgtccagggttcgaaccccgacccctgcatagaagaatgcattttcctaccaactgag 43837486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 49251407 - 49251484
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| |  || |||||||||| ||||||||||||||| |||||||    ||||||||||||||||    
T  49251407 aggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagttat 49251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 538341 - 538413
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||||||||| |||||| ||||| |||||||| | | ||||||||||||| |||||||   ||||||||||||    
T  538341 aggtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatgcattgttctaccaactga 538413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 33176152 - 33176188
Alignment:
Q  86 cccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33176152 cccctgcatataacaatgcatatccctaccaactgag 33176188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 47645833 - 47645881
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||| |||| |||||||||||||||||| ||||| |||||||||    
T  47645833 ttcgaaccccgacctctgcatataacaatgcatgtctctgccaactgag 47645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 3341738 - 3341821
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | ||| |||||| ||| | ||||||||||||| ||||||| || || |||||||||    
T  3341738 acctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgccaactgag 3341821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 3569102 - 3569055
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    ||||||||||||||||| ||||||||||||||| || || ||||||||    
T  3569102 ttcgaaccctgacccctacatataacaatgcatgtccctgccaactga 3569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 10588021 - 10587970
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    |||| |||||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  10588021 tattgatcccttttaaaatactaatacaacatttattattctttttcactaa 10587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 29491551 - 29491496
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 29491496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 44949581 - 44949526
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||| ||| | |||||||||| ||||| | |||||||||||||||    
T  44949581 gtgaataaatggggtgttcagggttcgaaccccgacccgtacatataacaatgcat 44949526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 24662062 - 24662008
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||||| |  || ||||||| |||||||||||||||||| |||||||    
T  24662062 tgaataaatggggtgtctggggttcgaatcctgacccctgcatataataatgcat 24662008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 1721223 - 1721150
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| || ||| | ||| ||||||| || | ||||||||||||||||||||| |  ||||||||||||    
T  1721223 aggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgttcctaccaactgag 1721150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 3140413 - 3140364
Alignment:
Q  77 gaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||| ||||||| ||||||||||||||| |||||  ||||||||||||    
T  3140413 gaaccccgacccctacatataacaatgcatgtctctgtcaactgagttat 3140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 4288671 - 4288594
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||||||||| ||| |  || |||||||| ||||||||||||||||| |||| || ||  |||||| ||||||||    
T  4288671 aggtgaataaatgaggtgtctggggttcgaactctgacccctgcatataataatgtatgtccataccaattgagttat 4288594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 4354117 - 4354174
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | || ||||||||||| | ||||||||||||| |||||||    
T  4354117 aggtgaataagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcat 4354174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 8310726 - 8310689
Alignment:
Q  60 tggggtattcggagttcgaaccctgacccctgcatata 97  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  8310726 tggggtatccggggttcgaaccctgacccctgcatata 8310689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 8364420 - 8364497
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||  ||||| |||||||| | ||||| | ||||||| ||||||| |  ||||||||||||||||    
T  8364420 aggtgaataagtggggcgttcggggttcgaactccgacccatacatataataatgcattttcctaccaactgagttat 8364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 19424129 - 19424080
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataa 98  Q
    |||||||||| |||||| | ||| |||||||||| |||||||||||||||    
T  19424129 aggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataa 19424080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 23930556 - 23930613
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||||| | | | |||||||||| ||||||||||||||| |||||||    
T  23930556 aggtaaataaatggggtgtccagggttcgaaccccgacccctgcatataataatgcat 23930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 25152756 - 25152793
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||||||| || |||||||||||||||    
T  25152756 cggagttcgaaccctgacctctacatataacaatgcat 25152793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 35619023 - 35619076
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca 105  Q
    |||||||||||| | ||||| |||||||||| ||||||| ||||||| ||||||    
T  35619023 tgaataaatgggatgttcggggttcgaaccccgacccctacatataataatgca 35619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 41182855 - 41182798
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatat 108  Q
    |||||||| |||||| | ||| |||| ||||| |||||||||||||||||||| ||||    
T  41182855 gtgaataagtggggtgtccggggttcaaaccccgacccctgcatataacaatgtatat 41182798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 47141842 - 47141895
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||| | ||||||||||||||||||||||| || ||  ||||||||||||    
T  47141842 gttcgaactccgacccctgcatataacaatgcatgtccctgtcaactgagttat 47141895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 47939211 - 47939267
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||||||||||||||  | ||||||||||||||||||||    
T  47939211 aggtgaataagtggggtgtccggagttcgaaccc-caaccctgcatataacaatgcat 47939267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 4605891 - 4605931
Alignment:
Q  86 cccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  4605891 cccctgcatataacaatgcatgtctctgtcaactgagttat 4605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 7906362 - 7906410
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    ||||||||||   ||||||||||||||||||||| || |||||||||||    
T  7906362 gttcgaaccccagcccctgcatataacaatgcatgtccctaccaactga 7906410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 12553275 - 12553203
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccct-gacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||| |||||| | ||| ||||||||||  | ||||||||||||||||||||| |  ||||||||||||    
T  12553275 gtgaataagtggggtgtccggggttcgaacccccggcccctgcatataacaatgcatgttcctaccaactgag 12553203  T

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Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 14307708 - 14307779
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||| |||||| ||||| |||||||||  ||||||||||||||||||||||| || ||||||||||||    
T  14307708 gtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtccctaccaactgag 14307779  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 34830674 - 34830597
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||| ||||||||||||| | |||||||||||||| | ||| |||||||||||||||||||||||||||| ||||    
T  34830674 tttcaaggagaataaatggggtgtccggagttcgaaccccggccc-tgcatataacaatgcatatctctaccaagtgag 34830597  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 41699184 - 41699108
Alignment:
Q  50 ggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgagttat 126  Q
    ||||||||| |||||| ||||| |||||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||    
T  41699184 ggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcaatatc-ctaccaactgagttat 41699108  T

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Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 11133159 - 11133085
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgag 122  Q
    |||||||||| |||||| | ||| |||||||||| |||||||||||||||||||||| | || ||||||||||||    
T  11133159 aggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgag 11133085  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 44132578 - 44132648
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||| ||||| |  ||||||||||||| |||| |||||||||||||||||| ||||| |||||||||    
T  44132578 tgaataaacggggtgtctggagttcgaaccccgacctctgcatataacaatgcatgtctctgccaactgag 44132648  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 4529777 - 4529838
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctct 112  Q
    |||||||| |||||| |||||||||||||| | ||||||||||||||| ||||||| |||||    
T  4529777 gtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcatgtctct 4529838  T

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Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 44721716 - 44721789
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||||||||| | ||  |||||||||| ||||||||||||||| |||||||   |||||||||||||    
T  44721716 aggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatgcattgttctaccaactgag 44721789  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 917327 - 917379
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    ||||||| || ||||||||||||||| ||||||| ||||||||||||||||||    
T  917327 gttcgaatcccgacccctgcatataataatgcatgtctctaccaactgagtta 917379  T

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Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 39118472 - 39118400
Alignment:
Q  53 gaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||||| |||||| |||||  ||||||| ||| |||||||||||||||||| || || |||||||||||||||    
T  39118472 gaataagtggggtgttcgggattcgaactctggcccctgcatataacaatgtatgtccctaccaactgagtta 39118400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 15873585 - 15873636
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||| |||||||||||||| |||||||| |||||||| |||||||||||||    
T  15873585 tatttgtcccttttataatatcaatacaacatttattactcttttccactaa 15873636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 18065342 - 18065264
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||||||||| |  ||| ||||| |||||||||   ||||||||||||||||||||||  ||||||||||||||    
T  18065342 tttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgag 18065264  T

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Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 36386160 - 36386198
Alignment:
Q  84 gacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  36386160 gacccctgcatataacaatgcatatccctaccaactgag 36386198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 38763502 - 38763548
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttcc 186  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  38763502 tatttgtcccttttataataccaatacaacatttattatccttttcc 38763548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 2114447 - 2114520
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||||| ||| | ||| |||||||||| ||||||| ||||||| |||||||   |||||||||||||    
T  2114447 aggtgaataaatgaggtgtccggggttcgaaccccgacccctacatataataatgcattgttctaccaactgag 2114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 3037634 - 3037691
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | |||||||||||||||||||||    
T  3037634 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcat 3037691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 7086336 - 7086263
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| |||||| ||||| ||||||| || | ||||||||||||| |||||||  | ||||||||||||    
T  7086336 aggtgaataattggggtgttcggggttcgaatcccggcccctgcatataataatgcattgccctaccaactgag 7086263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 9520891 - 9520834
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||| || |||||| |||||||||||||||    
T  9520891 aggtgaataagtggggtgttcggggttcgaactctaacccctacatataacaatgcat 9520834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 10262822 - 10262745
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| |  || |||||||||| ||||||||||||||| |||||||    ||||||||||||||||    
T  10262822 aggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagttat 10262745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 30832300 - 30832247
Alignment:
Q  138 actatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||| ||| ||||||| || ||||||||||||||||||| |||||||||||    
T  30832300 actatttgtccattttatattatcaatacaatatttattattattttccactaa 30832247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 10767067 - 10767016
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatg 103  Q
    ||||||| || ||| |||||||||||||||| ||||||| ||||||||||||    
T  10767067 tgaataagtgaggtgttcggagttcgaaccccgacccctacatataacaatg 10767016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 23492819 - 23492862
Alignment:
Q  148 ccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  23492819 ccttttacaatacaaatacaacatttattattcttttccactaa 23492862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 1244662 - 1244580
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||| |||| |||||||||| |||||| | ||| ||||||||||  ||||||||||||| ||||| || || || ||||||||    
T  1244662 acctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaactga 1244580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 9796977 - 9796923
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  9796977 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 9796923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 33816408 - 33816473
Alignment:
Q  57 aaatggggtattcggagttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    ||||||||| ||||| ||||||| || |||||||||||||||  |||| ||||||||||||||||||    
T  33816408 aaatggggtgttcggggttcgaaacccgacccctgcatataa-tatgcaatatctctaccaactgag 33816473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 36426871 - 36426925
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||||| ||||||||||||||||  |||||| ||||||| |||||||    
T  36426871 tgaataagtggggtgttcggagttcgaaccccaacccctacatataataatgcat 36426925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 37065465 - 37065503
Alignment:
Q  68 tcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  37065465 tcggagttcgaaccccgaccactgcatataacaatgcat 37065503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 40688647 - 40688696
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  40688647 gttcgaaccctggcccctgcatataa-aatgcaatatctctaccaactgag 40688696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 407558 - 407502
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatc 109  Q
    |||||||||||||| | ||| |||||||| | ||||| ||||||||||||||||||||    
T  407558 tgaataaatggggtgt-cggggttcgaactccgacccttgcatataacaatgcatatc 407502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 580795 - 580852
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||||    
T  580795 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcat 580852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 3179383 - 3179330
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||  ||||||||||||||| |||||||   |||||||||||||||||    
T  3179383 gttcgaacctcgacccctgcatataataatgcattgttctaccaactgagttat 3179330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 10602064 - 10602019
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaac 118  Q
    |||||||||| | ||||||||||||||||||||| ||||| |||||    
T  10602064 gttcgaaccccgtcccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 13975210 - 13975161
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataaca 100  Q
    ||||| ||||||||| | |||||||||||| | |||||||||||||||||    
T  13975210 gtgaagaaatggggtgtccggagttcgaactccgacccctgcatataaca 13975161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 16261391 - 16261358
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||||||||||||||||||||||    
T  16261391 gttcgaactctgacccctgcatataacaatgcat 16261358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 17154732 - 17154675
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||||    
T  17154732 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcat 17154675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 19352917 - 19352872
Alignment:
Q  81 cctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||    
T  19352917 cctgacctctgcatataacaatgcatgtctctgtcaactgagttat 19352872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 22297464 - 22297521
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||||| | ||| ||||||||||   ||||||||||||| |||||||    
T  22297464 aggtgaataaatggggtgtccggggttcgaacccctgcccctgcatataataatgcat 22297521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 26807120 - 26807173
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||||| ||||||||||||| |||||||    ||||||||||||||||    
T  26807120 gttcgaaccctggcccctgcatataataatgcattgtcctaccaactgagttat 26807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 38557231 - 38557283
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatg-catatctctaccaactgagtta 125  Q
    |||||||||| ||||||||||||||| |||| |||||| |||||||||||||||    
T  38557231 gttcgaaccccgacccctgcatataa-aatgccatatccctaccaactgagtta 38557283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 43936762 - 43936714
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgag 122  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  43936762 ttcgaaccctgacccctgcatataa-aatgcgatatccctaccaactgag 43936714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 6496501 - 6496449
Alignment:
Q  70 ggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||| |||| |||| ||||||||||||||| || || |||||||||    
T  6496501 ggagttcgaacactgaaccctacatataacaatgcatgtcccttccaactgag 6496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 16028141 - 16028197
Alignment:
Q  70 ggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||||||||| |||| |||||||||| |||||||    ||||||||||||||||    
T  16028141 ggagttcgaaccccgaccactgcatataataatgcattgtcctaccaactgagttat 16028197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 22538622 - 22538546
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||||||||| || ||| |||||  |||||||||  |||||||||||||| |||||||    |||||||||||||||    
T  22538622 aggtgaataagtgaggtgttcgggattcgaaccccaacccctgcatataataatgcattgtcctaccaactgagtta 22538546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 34376604 - 34376548
Alignment:
Q  70 ggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||| |||||| || ||||||||||||||||||| || || |||||||| ||||    
T  34376604 ggagttcaaaccctaactcctgcatataacaatgcatgtccctgccaactgaattat 34376548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 38293248 - 38293200
Alignment:
Q  70 ggagttcgaaccctgacccctgcatataacaatgcatatctctaccaac 118  Q
    ||||||||||||||| ||||| ||||||| |||| ||||| ||||||||    
T  38293248 ggagttcgaaccctggcccctacatataataatgaatatccctaccaac 38293200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 24257004 - 24256922
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||| |||||||| ||| |||||||||  | ||||||||||||| ||||||| |||||||||||||| ||||    
T  24257004 tttcaaggtgaataagtggggtatccggggttcgaacctcggcccctgcatataataatgcatgtctctaccaactgacttat 24256922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 1488171 - 1488098
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||||||||||||| || || |||||||||| |||| |||||||||||||||||| ||||| |||| ||||    
T  1488171 aggtgaataaatggggtgtttggggttcgaaccccgacctctgcatataacaatgcatgtctctgccaattgag 1488098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 20858395 - 20858472
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||||| | |||| |||||||||  |||||||||||||||||||||| || || |||||||||||||    
T  20858395 aggtaaataaatggggtgtccggaattcgaaccccaacccctgcatataacaatgcatgtccctgccaactgagttat 20858472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 30668196 - 30668273
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| ||||  |||||||| ||||||||||||||||| ||||||| ||| | |||||||||||||    
T  30668196 aggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgccaactgagttat 30668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 34524968 - 34524885
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| ||||| | |||||||| | ||||||||||||||||||||| || || |||||||||    
T  34524968 acctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccctgccaactgag 34524885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 30833105 - 30833028
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||| ||| |||||| |||||| | ||| |||||||||| ||||||||||||||||||||||| || || ||||||||    
T  30833105 tttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactga 30833028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 35190846 - 35190773
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| |||||| ||||| |||||||| | ||||||||||||||| |||||||   |||||||||||||    
T  35190846 aggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcattgttctaccaactgag 35190773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 5544355 - 5544283
Alignment:
Q  53 gaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||||| ||||||||  || |||||||||| ||||||||||||||||||| ||| || ||| |||||||||||    
T  5544355 gaataagtggggtatctggggttcgaaccccgacccctgcatataacaatacatgtccctatcaactgagtta 5544283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 14949021 - 14949109
Alignment:
Q  39 acctatttcgaggtgaataaatgggg-tattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||| |||||||||||||||| | | |||||||||||||| |||| |||||||||| |||| || | ||| |||||||||||||    
T  14949021 acctttttcaaggtgaataaatgggggtgtccggagttcgaaccccgacctctgcatataataatgtatgtttctgccaactgagttat 14949109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 17347350 - 17347261
Alignment:
Q  36 tttacctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||||| |||  |||||||||| |||||| | |   |||||||||| ||||| |||||||||||||||||||| || |||||||||||||    
T  17347350 tttaccttttttaaggtgaataagtggggtgtccaaggttcgaaccc-gacccatgcatataacaatgcatatccctgccaactgagttat 17347261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 5288357 - 5288434
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| || ||| | ||||||||| |||| ||||||||||||||| |||||||    ||||||||||||||||    
T  5288357 aggtgaataattgaggtgtccggagttcggaccccgacccctgcatataataatgcattgtcctaccaactgagttat 5288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 7374062 - 7374119
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| |||||||||||||| | ||||| | |||||||||||||||    
T  7374062 aggtgaataagtggggtgttcggagttcgaactccgacccatacatataacaatgcat 7374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 8176079 - 8176006
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| |||||| |||||||||||||| |    |||||||||||||||||||| |||||  ||||||||    
T  8176079 aggtgaataagtggggtgttcggagttcgaacaccagtccctgcatataacaatgcatgtctctgtcaactgag 8176006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 11520800 - 11520727
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||  || |||||||||||||||| | || |||||||||| |||||||||| || |||| ||||    
T  11520800 aggtgaataaatgatgtgttcggagttcgaaccccggccactgcatataagaatgcatatccctgccaattgag 11520727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 22389762 - 22389819
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | |||  ||||||||||||||||||||||||| |||||||    
T  22389762 aggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcat 22389819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 4844197 - 4844149
Alignment:
Q  78 aaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||| ||||||||||||||||||||||| || || |||||||||||||    
T  4844197 aaccccgacccctgcatataacaatgcatgtccctgccaactgagttat 4844149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 10442943 - 10442891
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||  |||||| |||||||||||| ||||||||| ||||||||||||    
T  10442943 ttcgaaccccaacccctacatataacaatgtatatctctatcaactgagttat 10442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 18631553 - 18631501
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatg 103  Q
    |||||||| ||||||||| || ||||||| || ||||||||||||||||||||    
T  18631553 gtgaataagtggggtatttggggttcgaatcccgacccctgcatataacaatg 18631501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 20568269 - 20568317
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatata 97  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||||||    
T  20568269 aggtgaataagtggggtgttcggggttcgaaccccgacccctgcatata 20568317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 12339901 - 12339952
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||| ||||||||||||||| |||||||  ||||||||||||||| |||||    
T  12339901 tatttttcccttttataatacaaatacaacttttattattcttttctactaa 12339952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 17305605 - 17305522
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccc-tgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||| |||||| | | |  ||||||||| || ||||||||||||| ||||||| || ||||||||||||||||    
T  17305605 tttcaaggtgaataagtggggtgtccaggattcgaacccctgccccctgcatataataatgcatgtccctaccaactgagttat 17305522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 22730752 - 22730791
Alignment:
Q  87 ccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  22730752 ccctgcatataacaatgcatgtctctgccaactgagttat 22730791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 23771114 - 23771059
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||| | ||||||||||||||   ||||||||||||| |||||||    
T  23771114 gtgaataaatggggtgtccggagttcgaaccccttcccctgcatataataatgcat 23771059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 10864806 - 10864848
Alignment:
Q  141 atttatcccttttataataccaatacaatatttattattcttt 183  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||    
T  10864806 atttttccattttatactaccaatacaatatttattattcttt 10864848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 7563588 - 7563645
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| ||| |||||||||||||||||| ||| |||||||    
T  7563588 aggtgaataagtggggtgtccggggtttgaaccctgacccctgcatgtaataatgcat 7563645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 9491747 - 9491824
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| | ||| |||||||||| | ||||| ||||||| |||||||    ||||||||||||||||    
T  9491747 aggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagttat 9491824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 10373654 - 10373601
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| ||||||||||||||| |||||||   |||||||||| ||||||    
T  10373654 gttcgaaccccgacccctgcatataataatgcattgttctaccaactaagttat 10373601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 25020540 - 25020597
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||||    
T  25020540 aggtgaataagtggggtgtccggggttcgaacccaggcccctgcatataataatgcat 25020597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 26528650 - 26528573
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| | ||  ||| |||||| ||||||||||||||| |||||||   |||||||||| ||||||    
T  26528650 aggtgaataagtggggtgtccgaggtttgaaccccgacccctgcatataataatgcattgttctaccaactaagttat 26528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 34396166 - 34396109
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||| |||| | |||||||||||| | | ||||||||||||| |||||||    
T  34396166 aggtgaataaatagggtgtccggagttcgaactccggcccctgcatataataatgcat 34396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 7425442 - 7425390
Alignment:
Q  71 gagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagt 123  Q
    |||||||||||||||||||||||||||| |  | ||||| |||| ||||||||    
T  7425442 gagttcgaaccctgacccctgcatataatatggaatatccctacaaactgagt 7425390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 12284187 - 12284131
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||||||||||||| ||| ||||||||||| | |  ||||| |||||||||||||||    
T  12284187 cggagttcgaaccccgacacctgcatataatattcaatatccctaccaactgagtta 12284131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 15063574 - 15063638
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatat 108  Q
    |||| |||| |||||||||||| | ||||||  |||| | ||||||||||||||| |||||||||    
T  15063574 tttcaaggtaaataaatggggtgtccggagtgtgaactccgacccctgcatataataatgcatat 15063638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 32540963 - 32541035
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||||||||| ||||||||  ||||||||||| | |||| ||  |||||| ||||||| ||||| ||||||||    
T  32540963 aggtgaataagtggggtatctggagttcgaactccgacctctatatataataatgcatgtctctgccaactga 32541035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 39955094 - 39955010
Alignment:
Q  39 acctatttcgaggtgaataaatgggg-tattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| ||||| ||| | ||||| |||||||||||||||| ||||||||||||| || ||||||||||||    
T  39955094 acctttttcaaggtgaataagtgggggtatccagagtttgaaccctgacccctgcgtataacaatgcatgtccctaccaactgag 39955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 39213285 - 39213336
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  39213285 tatttgtcccttttataataccaatacaacatttattatttttttccactaa 39213336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 18872604 - 18872547
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||||||| |||||||    
T  18872604 aggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcat 18872547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 17557112 - 17557037
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    |||||||||| |||||| | ||| ||| |||||| ||||||| ||||||||||||||| ||||| ||||||||||||    
T  17557112 aggtgaataagtggggtgtccgg-gtttgaaccccgacccctacatataacaatgcatgtctctgccaactgagtta 17557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 27006433 - 27006366
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||| |||||||||| ||| || | |||||||||||||| |||||| ||||||||||||||||    
T  27006433 acctttttcaaggtgaataagtggagtgtccggagttcgaaccccgaccccagcatataacaatgcat 27006366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 29144223 - 29144149
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagtta 125  Q
    ||||||||||||||| |  ||||||| ||||| ||||||||||||||| |||||||    |||||||||||||||    
T  29144223 gtgaataaatggggtgtctggagttcaaaccccgacccctgcatataataatgcattgtcctaccaactgagtta 29144149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 31556906 - 31556844
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||| |||||| | ||| |||||||| | |||||||||||||||||||||||    
T  31556906 tttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcat 31556844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 31907739 - 31907677
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| |||||||||| |||||| ||||  ||| ||||| ||||||||||||||||||||||||    
T  31907739 tttcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcatataacaatgcat 31907677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 4985818 - 4985765
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||||  |||||||||||||| ||||||| |||||||||||    
T  4985818 gttcgaaccccgacccctatatataacaatgcatgtctctacaaactgagttat 4985765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 15105407 - 15105359
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaa 191  Q
    ||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  15105407 tatttatcccttttacaataccaata---tatttattattcttttccactaa 15105359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 19608676 - 19608623
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| |||||||||  ||| ||||||||    
T  19608676 cggagttcgaaccccgacccctgcatataataatgcatattcctatcaactgag 19608623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 32158426 - 32158483
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||||| | ||||||||||||| |||||||    
T  32158426 aggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcat 32158483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 3102144 - 3102196
Alignment:
Q  54 aataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||| ||||| |||||||||| ||| ||| |||||||||||||||    
T  3102144 aataaatggggtgttcggggttcgaaccccgactcctacatataacaatgcat 3102196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 1244739 - 1244794
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgc 104  Q
    |||||||||| |||||| |  || |||||||||||||||||||||||||| |||||    
T  1244739 aggtgaataagtggggtgtctggggttcgaaccctgacccctgcatataataatgc 1244794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 4674829 - 4674884
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  4674829 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 4674884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 9408965 - 9409040
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgagttat 126  Q
    |||||||||| ||| | ||| |||||||| | |||||||||||||||||||||| | || || |||||||||||||    
T  9408965 tgaataaatgaggtgtccggggttcgaactccgacccctgcatataacaatgcattgtccctgccaactgagttat 9409040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 36045148 - 36045203
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  36045148 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 36045203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 37986869 - 37986952
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||| | | ||| |||| ||| | |||| |||||||||| ||||||||||||||| |||||||    
T  37986869 acctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatgcatatctctactaactgag 37986952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 38040327 - 38040276
Alignment:
Q  71 gagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||  ||||||||||||||||||||||| || || |||||||||    
T  38040327 gagttcgaacctcgacccctgcatataacaatgcatgtccctgccaactgag 38040276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 23925623 - 23925569
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||||||| |||  ||||||||| ||||||||||||||| |||||||    
T  23925623 tgaataagtggggtatccgggattcgaacccagacccctgcatataataatgcat 23925569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 2029140 - 2029189
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataa 98  Q
    |||||||||| |||||| ||||| ||||||| || |||||||||||||||    
T  2029140 aggtgaataagtggggtgttcggggttcgaatcccgacccctgcatataa 2029189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 7147055 - 7147104
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| ||||||||||||||| ||||||| ||  |||||||||||    
T  7147055 gttcgaaccccgacccctgcatataataatgcatgtccttaccaactgag 7147104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 7234884 - 7234941
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||||||||||  || |||||||||| |||| || ||||||| |||||||    
T  7234884 aggtgaataaatggggtatctggggttcgaaccccgacctctacatataataatgcat 7234941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 9963499 - 9963442
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||  | || |||||||||||  ||||||||||||||||||||||    
T  9963499 aggtgaataagtggggggtccgaagttcgaaccccaacccctgcatataacaatgcat 9963442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 18756048 - 18755996
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgagtta 125  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||    
T  18756048 gttcgaaccccgactcctgcatataa-aatgcgatatctctaccaactgagtta 18755996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 20945903 - 20945960
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | |||| ||||||||| | ||||||||||||| |||||||    
T  20945903 aggtgaataagtggggtgtccggatttcgaaccccggcccctgcatataataatgcat 20945960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 25660971 - 25660922
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||||| || | |||||||||||||||||||||||| || |||||||||    
T  25660971 gttcgaatcccggcccctgcatataacaatgcatatccctgccaactgag 25660922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 33800976 - 33800899
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| |  || |||||||||| | ||||||||||||| |||||||    ||||||||||||||||    
T  33800976 aggtgaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagttat 33800899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 36742003 - 36742052
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| || |||||||||||||||| ||| ||||| |||||||||    
T  36742003 gttcgaaccccgatccctgcatataacaattcatgtctctgccaactgag 36742052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 42260732 - 42260789
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||| | | ||||||||||| || || ||||||||||||||||||||    
T  42260732 aggtgaataagtgggatgtccggagttcgaaacccgaaccctgcatataacaatgcat 42260789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 42781630 - 42781679
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| || |||||||||||||||||||| || || |||||||||    
T  42781630 gttcgaaccccgaaccctgcatataacaatgcatgtccctgccaactgag 42781679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 3535948 - 3536020
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactga 121  Q
    |||||||||| |||||| | ||| |||||||||| | | |||| |||||||||||||| || || ||||||||    
T  3535948 aggtgaataagtggggtgtccggggttcgaaccccggctcctgtatataacaatgcatgtccctgccaactga 3536020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 5731716 - 5731760
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattctttt 184  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||    
T  5731716 tatttgtcccttttacaatatcaatacaatatttattattttttt 5731760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 6806654 - 6806726
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgag 122  Q
    |||||||| ||| || | ||| ||||||| || |||||||||||||||||||||| | ||||| |||||||||    
T  6806654 gtgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcattgtctctgccaactgag 6806726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 13862184 - 13862148
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatc 109  Q
    |||||||| | ||||||||||||||||||||||||||    
T  13862184 gttcgaactccgacccctgcatataacaatgcatatc 13862148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 38129020 - 38129080
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgc 104  Q
    |||| |||||||||| ||| || | | | |||||||||| |||||||||||||||||||||    
T  38129020 tttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcatataacaatgc 38129080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 12646 - 12591
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||    
T  12646 gtgaataaatggggtatccgaggttcgaaccctgacccctgcatataataatgcat 12591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 17467365 - 17467284
Alignment:
Q  44 tttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||| |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||| ||||| ||||||||||||||||    
T  17467365 tttcaaggtgaataagtggggtgtccggggttcgaacccgg-cccctgcatataataatgtatatccctaccaactgagttat 17467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 7345511 - 7345434
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| |||||| || |||||| ||| || ||||||||||||||| ||||||| || || |||||||||||||    
T  7345511 aggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtccctgccaactgagttat 7345434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 43468717 - 43468774
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | |||||||||||||| ||||||| |||||||||||||||    
T  43468717 aggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcat 43468774  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 220364 - 220447
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | |||  |||||||||||||| |||||||||||| ||||| || || |||||||||    
T  220364 acctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgag 220447  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 689519 - 689602
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | |||  |||||||||||||| |||||||||||| ||||| || || |||||||||    
T  689519 acctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgag 689602  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 733987 - 734070
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | |||  |||||||||||||| |||||||||||| ||||| || || |||||||||    
T  733987 acctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgag 734070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 857883 - 857966
Alignment:
Q  39 acctatttcgaggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| |||| |||||||||| |||||| | |||  |||||||||||||| |||||||||||| ||||| || || |||||||||    
T  857883 acctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgag 857966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 11172415 - 11172365
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaat 102  Q
    |||||||||||||| ||| | |||||||||||||||||| |||||||||||    
T  11172415 tgaataaatggggtgttcagggttcgaaccctgacccctacatataacaat 11172365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 5879166 - 5879113
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattcttttccactaaaa 193  Q
    ||||| |||||||||||||||||||| ||||||||||| | ||||| |||||||    
T  5879166 tatttgtcccttttataataccaatataatatttattacttttttcgactaaaa 5879113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 30542847 - 30542790
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||  | ||||| |||||||||| || ||||||||||||||||||||    
T  30542847 aggtgaataaatggaatgttcggggttcgaaccccgatccctgcatataacaatgcat 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 14012693 - 14012638
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| |||||| | |||| ||||||||| | |||||||||||||||||||||    
T  14012693 gtgaataagtggggtgtccggacttcgaaccccggcccctgcatataacaatgcat 14012638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 35301177 - 35301232
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||| | |||| | |||||||||||||| ||||||||||||||| |||||||    
T  35301177 gtgaataagtagggtgtccggagttcgaaccccgacccctgcatataataatgcat 35301232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 4798553 - 4798626
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgag 122  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||| |||| ||||||||||||    
T  4798553 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatc-ctaccaactgag 4798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 25139902 - 25139956
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||| | ||||| |||||||||| ||||||||||||||| |||||||    
T  25139902 tgaataagtgggatgttcggggttcgaaccccgacccctgcatataataatgcat 25139956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 27822153 - 27822076
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgagttat 126  Q
    |||||||||| |||||| || || |||| || || ||||||||||||||| |||||| |||| ||||||||||||||||    
T  27822153 aggtgaataagtggggtgtttggggttcaaatccggacccctgcatataataatgcattatc-ctaccaactgagttat 27822076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 27870813 - 27870851
Alignment:
Q  149 cttttataataccaatacaatatttattattcttttcca 187  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  27870813 cttttataatatcaatacaatattttttattcttttcca 27870851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 45258078 - 45258131
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgagttat 126  Q
    ||||||||||||| || |||||||||||||||| |||| ||||||||||||||||    
T  45258078 gttcgaaccctgaaccttgcatataacaatgcattatc-ctaccaactgagttat 45258131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 1032973 - 1033029
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||| | ||||||||||||||| |||||||    
T  1032973 aggtgaataagtggggtgttcgg-gttcgaactccgacccctgcatataataatgcat 1033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 6978903 - 6978846
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||||||| || ||||  ||||||||||  |||||||||||||| |||||||    
T  6978903 aggtgaataaatggagtgttcgtggttcgaaccccaacccctgcatataataatgcat 6978846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 8034613 - 8034556
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| ||||| |||||||||| | | ||||||||||| |||||||    
T  8034613 aggtgaataagtggggtgttcggggttcgaaccccggctcctgcatataataatgcat 8034556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 8862130 - 8862159
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataa 98  Q
    ||||||||||||||||||||||||||||||    
T  8862130 cggagttcgaaccctgacccctgcatataa 8862159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 10199754 - 10199811
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| || || |||||||||| | ||||||||||||| |||||||    
T  10199754 aggtgaataagtggggtgtttggggttcgaaccccggcccctgcatataataatgcat 10199811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 13762524 - 13762581
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||  |||||||| ||||||||||||||||| |||||||    
T  13762524 aggtgaataagtggggtgtccgtggttcgaacactgacccctgcatataataatgcat 13762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 15042377 - 15042434
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||||    
T  15042377 aggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcat 15042434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 16621603 - 16621554
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||| | || |||||||||||| ||||||||||||| |||||||||    
T  16621603 gttcgaactccgatccctgcatataataatgcatatctctgccaactgag 16621554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 26657915 - 26657866
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||| |  |||||||||||||||||||| || ||||||||||||    
T  26657915 gttcgaaccccggtccctgcatataacaatgcatgtccctaccaactgag 26657866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 26703902 - 26703979
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    |||||||||| || ||| |||||  ||||||||| ||||| ||||||||| |||||||    ||||||||||||||||    
T  26703902 aggtgaataagtgaggtgttcgggattcgaaccccgacccttgcatataataatgcattgtcctaccaactgagttat 26703979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 27134490 - 27134531
Alignment:
Q  141 atttatcccttttataataccaatacaatatttattattctt 182  Q
    |||| ||||||| ||||||||||||||| |||||||||||||    
T  27134490 atttgtccctttaataataccaatacaacatttattattctt 27134531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 30942611 - 30942668
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||| ||||| |||||| ||||| |||||||||| | ||||||||||||| |||||||    
T  30942611 aggtaaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcat 30942668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 33570441 - 33570498
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| |||||| | ||  |||||||||| ||||| |||||||||||||||||    
T  33570441 aggtgaataagtggggtgtccgaggttcgaaccccgacccatgcatataacaatgcat 33570498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 36540349 - 36540297
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgc-atatctctaccaactgagtta 125  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||    
T  36540349 gttcgaaccccgacccctgcatataa-aatgcaatatccctaccaactgagtta 36540297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 216184 - 216232
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| || || || |||||||||    
T  216184 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgag 216232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 692744 - 692792
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| || || || |||||||||    
T  692744 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgag 692792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 696953 - 697001
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| || || || |||||||||    
T  696953 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgag 697001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 729807 - 729855
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| || || || |||||||||    
T  729807 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgag 729855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 853702 - 853750
Alignment:
Q  74 ttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||||||||||||| ||||||||||||||| || || || |||||||||    
T  853702 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgag 853750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 2696614 - 2696538
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgca-tatctctaccaactgagttat 126  Q
    |||||||| |||||| | ||| |||||||||| | ||||||||||||| |||||| | || || |||||||||||||    
T  2696614 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttat 2696538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 12899951 - 12899911
Alignment:
Q  151 tttataataccaatacaatatttattattcttttccactaa 191  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  12899951 tttataatacaaatacaatatttattattaatttccactaa 12899911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 30199756 - 30199728
Alignment:
Q  70 ggagttcgaaccctgacccctgcatataa 98  Q
    |||||||||||||||||||||||||||||    
T  30199756 ggagttcgaaccctgacccctgcatataa 30199728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 41687681 - 41687637
Alignment:
Q  140 tatttatcccttttataataccaatacaatatttattattctttt 184  Q
    |||||||| |||||||||||| |||||||| | ||||||||||||    
T  41687681 tatttatctcttttataatactaatacaatgtatattattctttt 41687637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 4598 - 4530
Alignment:
Q  54 aataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||| |||||||| || ||||| ||  ||||||||||||||||||||||||| || || |||||||||    
T  4598 aataagtggggtatccgaagttcaaattctgacccctgcatataacaatgcatgtccctgccaactgag 4530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 4618 - 4550
Alignment:
Q  54 aataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    ||||| |||||||| || ||||| ||  ||||||||||||||||||||||||| || || |||||||||    
T  4618 aataagtggggtatccgaagttcaaattctgacccctgcatataacaatgcatgtccctgccaactgag 4550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 7115 - 7079
Alignment:
Q  73 gttcgaaccctgacccctgcatataacaatgcatatc 109  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7115 gttcgaaacctgacccctgcatataacaatgcatatc 7079  T

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Target: scaffold0308 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 7157 - 7102
Alignment:
Q  51 gtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||||||||||| | ||| |||||||||| | ||||||||||||| |||||||    
T  7157 gtgaataaatggggtgtccggggttcgaaccccggcccctgcatataataatgcat 7102  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 451390 - 451444
Alignment:
Q  52 tgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    ||||||| |||||| | |||||||||||||| | ||||| |||||||||||||||    
T  451390 tgaataagtggggtgtccggagttcgaaccccggcccctacatataacaatgcat 451444  T

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Target: scaffold0533 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 9409 - 9352
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| ||| || |||||| ||||||||| ||||||||||| ||| |||||||    
T  9409 aggtgaataagtggagtgttcggaattcgaaccccgacccctgcatgtaataatgcat 9352  T

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Target: scaffold0191 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 16929 - 16873
Alignment:
Q  49 aggtgaataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcat 106  Q
    |||||||||| | |||| ||||| |||||||||| ||||||||||||||| |||||||    
T  16929 aggtgaataagtagggtgttcggggttcgaaccc-gacccctgcatataataatgcat 16873  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 34065 - 34118
Alignment:
Q  69 cggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgag 122  Q
    |||| ||||||||| | ||||||||||||||||||||| || || |||||||||    
T  34065 cggaattcgaaccccggcccctgcatataacaatgcatgtccctgccaactgag 34118  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 245473 - 245545
Alignment:
Q  54 aataaatggggtattcggagttcgaaccctgacccctgcatataacaatgcatatctctaccaactgagttat 126  Q
    ||||| |||||| |||||  ||||||||| ||||||||||||||||| ||||  |  || |||||||||||||    
T  245473 aataagtggggtgttcgggtttcgaaccccgacccctgcatataacagtgcacgttcctgccaactgagttat 245545  T

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