View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4546_low_19 (Length: 266)
Name: NF4546_low_19
Description: NF4546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4546_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 45557263 - 45557521
Alignment:
| Q |
1 |
tcaccaattttgttgagagacttaatttcccatactttgttaacatcactaaaatccatgctagcagcagctggtatgaaaaaactaccaaatcaaaagt |
100 |
Q |
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| T |
45557263 |
tcaccaattttgttgagagacttaatttcccatactttgttaacatcactaaaatccatgctagcagcagctggtatgaaaaaactaccaaatcaaaagt |
45557362 |
T |
|
| Q |
101 |
caagaatcacgttgtgatgtgttagcaaatatttgcaagcttataaaataaatcatgtaatacaaaatcaatttattataaacctaagaatgagttatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45557363 |
caagaatcacgttgtgatgtgttagcaaatatttgcaagcttataaaataaatcatgtaatacaaaatcaatttattataaacctaagaatgagttatca |
45557462 |
T |
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| Q |
201 |
tagtataagtttgattctattctatttctatgactacaaagcacaaacccttcttctca |
259 |
Q |
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| T |
45557463 |
tagtataagtttgattctattctatttctatgactacaaagcacaaacccttcttctca |
45557521 |
T |
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