View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4546_low_21 (Length: 250)

Name: NF4546_low_21
Description: NF4546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4546_low_21
NF4546_low_21
[»] chr3 (19 HSPs)
chr3 (18-167)||(19849541-19849686)
chr3 (19-167)||(26653694-26653838)
chr3 (68-162)||(20033767-20033861)
chr3 (67-167)||(19838983-19839083)
chr3 (19-167)||(19819106-19819250)
chr3 (19-167)||(19956630-19956774)
chr3 (68-161)||(19812874-19812967)
chr3 (19-157)||(19990071-19990205)
chr3 (19-167)||(19832416-19832560)
chr3 (19-167)||(24839402-24839546)
chr3 (19-167)||(26647550-26647694)
chr3 (68-161)||(19951715-19951808)
chr3 (19-146)||(20036052-20036175)
chr3 (164-241)||(19850874-19850950)
chr3 (19-160)||(20015636-20015773)
chr3 (35-146)||(20046682-20046789)
chr3 (19-153)||(19858618-19858748)
chr3 (21-139)||(19854048-19854162)
chr3 (19-129)||(19944263-19944369)
[»] chr5 (3 HSPs)
chr5 (19-160)||(26354362-26354499)
chr5 (21-160)||(38435024-38435159)
chr5 (68-160)||(9815625-9815717)
[»] chr1 (1 HSPs)
chr1 (68-160)||(1717811-1717903)
[»] chr8 (3 HSPs)
chr8 (19-167)||(22655744-22655888)
chr8 (19-138)||(22689130-22689245)
chr8 (67-155)||(11544660-11544748)
[»] chr2 (1 HSPs)
chr2 (34-157)||(39191414-39191533)


Alignment Details
Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 19849541 - 19849686
Alignment:
Q  18 ttcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatgga 117  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  19849541 ttcatttgttacatgtttgagagtttctgagctcattggatttgagtct----atagagcaatatctcccacatagagtctctttgcaattcggaatgga 19849636  T
Q  118 tcaagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  19849637 tcaagatgttccaagttatgtgccgaggttaaatgatactaaagacattg 19849686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26653694 - 26653838
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||| ||||||||| |||||  ||||||||||||||||    || ||||||||||| |||||||||||  || |||||||  |||| ||     
T  26653694 tcatttgttatatgcttgagagttgctgagctagttggatttgagtct----attgagcaatatcttccacatagagttgctatgcaatttggaattgac 26653789  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  26653790 caagatgttccaagttatgtggctaggttcaatgagactaaatacattg 26653838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 20033861 - 20033767
Alignment:
Q  68 tctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgagactaaaga 162  Q
    ||||||||||||||||| |||||||||||  || |||||||  ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  20033861 tctatagagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgttccaagttatgtgcctaggttcaacgagactaaaga 20033767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 19838983 - 19839083
Alignment:
Q  67 gtctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgagactaaagacatt 166  Q
    |||||||||||||||||| |||||||||||  || |||||||| |||||||||||||||||||| |||||||| ||||||| |||| ||||||| |||||    
T  19838983 gtctatagagcaatatcttccacatagagttgctatgcaattcggaatggatcaagatgttccaggttatgtggctaggttcaatgtgactaaatacatt 19839082  T
Q  167 g 167  Q
    |    
T  19839083 g 19839083  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 19819106 - 19819250
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| |||||||||||||||||||   ||||| ||||||||     |||||||||||||| |||||||||||  || |||| ||  |||| |||    
T  19819106 tcatttgttatatgtttgagagtttctgagcttgttggttttgagtcc----atagagcaatatcttccacatagagttgctatgcagtttggaattgat 19819201  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    |||||||||||  |||||||| ||||||| |||||||||||| ||||||    
T  19819202 caagatgttcctggttatgtggctaggttcaatgagactaaatacattg 19819250  T

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Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 19956630 - 19956774
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||| ||||||||||| |||   |||||||||||||||    |||||||||||||| |||||||||||  || |||||||  |||| |||    
T  19956630 tcatttgttatatgcttgagagtttccgagctggttggatttgagtct----atagagcaatatcttccacatagagttgctatgcaatttggaattgat 19956725  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    |||||||||||  |||||||  ||||||| |||||||||||| ||||||    
T  19956726 caagatgttccgggttatgtagctaggttcaatgagactaaatacattg 19956774  T

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Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 19812874 - 19812967
Alignment:
Q  68 tctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgagactaaag 161  Q
    ||||||||||||||||| |||||||||||  || |||||||  |||| |||||||||||||||||||||||||||||||| ||| | |||||||    
T  19812874 tctatagagcaatatcttccacatagagttgctatgcaatttggaattgatcaagatgttccaagttatgtgcctaggttcaataaaactaaag 19812967  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 19990071 - 19990205
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| |||| ||||||||||||||   |||||| |||| | |||    ||  ||||||||||||||||||||  ||||||||||  ||||||||    
T  19990071 tcatttgttagatgtatgagagtttctgagcttgttggaattgactttgt----agttcaatatctcccacatagagttgctttgcaatttggaatggat 19990166  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagact 157  Q
    |||||| |||||||||| ||||||||||| |||||||||    
T  19990167 caagatattccaagttacgtgcctaggttcaatgagact 19990205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 19832416 - 19832560
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| |||||||||||||||||||   ||||| ||||||||     |||||||||||||| |||||||||||  || ||||  |  |||| |||    
T  19832416 tcatttgttatatgtttgagagtttctgagcttgttggttttgagtcc----atagagcaatatcttccacatagagttgctatgcagattggaattgat 19832511  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    |||||||||||  |||||||| ||||||| |||||||||||| ||||||    
T  19832512 caagatgttcctggttatgtggctaggttcaatgagactaaatacattg 19832560  T

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Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 24839546 - 24839402
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||  |||||||||||||||  ||||||||||||||||    ||||| |||||||| |||||||||||  || |||||||| || | |||    
T  24839546 tcatttgttatattcttgagagtttctgagctagttggatttgagtct----atagaacaatatctaccacatagagttgctatgcaattcggatttgat 24839451  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    |||||||||||  |||||||| ||||  | ||||||||||||| |||||    
T  24839450 caagatgttcctggttatgtgtctagactcaatgagactaaagccattg 24839402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26647550 - 26647694
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||| |||||||||||||||   |||||||| ||     |||||||| || ||||| |||||||||||  || |||||||  ||||||||    
T  26647550 tcatttgttatatgcttgagagtttctgagcttgttggattcga----ctctatagaacagtatctgccacatagagttgctatgcaatttggaatggat 26647645  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    ||||||||||| ||| |||||||| | || |||||||||||||||||||    
T  26647646 caagatgttccgagtgatgtgcctcgattcaatgagactaaagacattg 26647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 19951715 - 19951808
Alignment:
Q  68 tctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgagactaaag 161  Q
    ||||||||||||||||| |||||||||||  || |||||||   |||||||||||||||||| ||||||||||||||||| ||| | |||||||    
T  19951715 tctatagagcaatatcttccacatagagttgctatgcaatttgcaatggatcaagatgttccgagttatgtgcctaggttcaataaaactaaag 19951808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 20036175 - 20036052
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||| ||||| |||||||||   |||||||||||||||    |||||||||||||| |||||||||||  || |||||||  |||| |||    
T  20036175 tcatttgttatatgcttgagggtttctgagctggttggatttgagtct----atagagcaatatcttccacatagagttgctatgcaatttggaattgat 20036080  T
Q  119 caagatgttccaagttatgtgcctaggt 146  Q
    ||||||||||| ||||| ||| ||||||    
T  20036079 caagatgttccgagttacgtggctaggt 20036052  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 19850874 - 19850950
Alignment:
Q  164 attgattgatgaataacttctacttcatttacttgcatgtaaatgaaacataacatttttagacacaagtagtataat 241  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||||| || |||||| | | ||||||||||    
T  19850874 attgattgttgaataacttctacttcatttacctg-atgtaaatgaaacataatatctttagagagaggtagtataat 19850950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 20015773 - 20015636
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||| || |||||||| |||   |||||||||||     ||||||||||| ||| | ||||| |||||  || |||||||  ||||||||    
T  20015773 tcatttgttatatgcttaagagtttccgagcttgttggatttga----ctctatagagcagtatttgccacacagagttgctatgcaatttggaatggat 20015678  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaa 160  Q
    |||||||||||| || |||||||||| || ||||||||||||    
T  20015677 caagatgttccaggtgatgtgcctagattcaatgagactaaa 20015636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 20046682 - 20046789
Alignment:
Q  35 tgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagtt 134  Q
    ||||||||||||||   |||||||||||||||    |||||||| ||||| ||||||||||| ||| |||||||  || | || ||||||||||| ||||    
T  20046682 tgagagtttctgagcttgttggatttgagtct----atagagcagtatcttccacatagagtttctatgcaatttggacttgaccaagatgttccgagtt 20046777  T
Q  135 atgtgcctaggt 146  Q
    ||||||| ||||    
T  20046778 atgtgccaaggt 20046789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 19858618 - 19858748
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||| ||| |||||||||||||||||||  |||||| |||||    || ||||||||||||||| |||||||||||  || |||||||   | | |||    
T  19858618 tcatttattatatgtttgagagtttctgagctagttgggtttga----gtttatagagcaatatctaccacatagagttgctatgcaatttgaatttgat 19858713  T
Q  119 caagatgttccaagttatgtgcctaggtttaatga 153  Q
    |||||||||||  |||||||| |||| || |||||    
T  19858714 caagatgttcctggttatgtgtctagattcaatga 19858748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 19854048 - 19854162
Alignment:
Q  21 atttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggatca 120  Q
    |||||| ||||| |||||||||||||||  |||||| |||||    || ||||||||||||||| |||||||||||  ||  ||||||  || | |||||    
T  19854048 atttgtcacatgcttgagagtttctgagctagttgggtttga----gtttatagagcaatatctaccacatagagttgctaggcaatttggatttgatca 19854143  T
Q  121 agatgttccaagttatgtg 139  Q
    |||||||||  ||||||||    
T  19854144 agatgttcctggttatgtg 19854162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 19944263 - 19944369
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||  ||||||||||| |||  ||||||||||||||||    ||||| |||||||| ||| |||||||  || |||||||| || | |||    
T  19944263 tcatttgttatattcttgagagtttccgagctagttggatttgagtct----atagaacaatatctaccatatagagttgctatgcaattcggatttgat 19944358  T
Q  119 caagatgttcc 129  Q
    |||||||||||    
T  19944359 caagatgttcc 19944369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 26354499 - 26354362
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| |||  ||||||||||||||   |||||||||||     ||||||||||| ||| | |||||||||||  || |||||||  ||||||||    
T  26354499 tcatttgttatatgcctgagagtttctgagcttgttggatttga----ctctatagagcagtatttgccacatagagttgctatgcaatttggaatggat 26354404  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaa 160  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  26354403 caagatgttccaagttatgtgcctagatttaatgagactaaa 26354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 38435159 - 38435024
Alignment:
Q  21 atttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggatca 120  Q
    |||||||||||| |||||||||||  ||  | |||||||||| |||    || || |||||||| ||||||||||   || || |||| ||||| |||||    
T  38435159 atttgttacatgcttgagagtttcctagctaattggatttgactct----attgaacaatatctaccacatagagatgctatgtaatttagaattgatca 38435064  T
Q  121 agatgttccaagttatgtgcctaggtttaatgagactaaa 160  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  38435063 agatgttccaagttatgtgcttaggttaaatgagactaaa 38435024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 9815625 - 9815717
Alignment:
Q  68 tctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgagactaaa 160  Q
    ||||||||||| ||| | |||||||||||  || |||||||   |||||||||||||||||||| |||||||||||| || ||||||||||||    
T  9815625 tctatagagcagtatttgccacatagagttgctatgcaatttgaaatggatcaagatgttccaacttatgtgcctagattcaatgagactaaa 9815717  T

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Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 1717811 - 1717903
Alignment:
Q  68 tctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgagactaaa 160  Q
    ||||||||||| ||||| |||||||||||  || |||||||  ||||||||||||||||||||||| |||||||||| || |||||| |||||    
T  1717811 tctatagagcagtatctgccacatagagttgctatgcaatttggaatggatcaagatgttccaagtgatgtgcctagattcaatgaggctaaa 1717903  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 22655888 - 22655744
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||  ||||||||| |||||||||   |||||||||||||||    |||||  ||||||| |||| |||||| ||| |||||||  |||| |||    
T  22655888 tcatttgttgtatgtttgagggtttctgagcttgttggatttgagtct----atagaaaaatatcttccacgtagagtttctatgcaatttggaattgat 22655793  T
Q  119 caagatgttccaagttatgtgcctaggtttaatgagactaaagacattg 167  Q
    |||||||||||  |||||||  ||||||| |||||||||||| ||||||    
T  22655792 caagatgttccgggttatgtagctaggttcaatgagactaaatacattg 22655744  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 22689245 - 22689130
Alignment:
Q  19 tcatttgttacatgtttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggat 118  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||    |||||||||||||||||| |||||||||||  ||  ||| ||  ||||||||    
T  22689245 tcatttgttatatgcttgagagtttctgagctagttggatttga----gtctatagagcaatatctaccacatagagttgctaggcagtttggaatggat 22689150  T
Q  119 caagatgttccaagttatgt 138  Q
    |||||||||||  |||||||    
T  22689149 caagatgttcctggttatgt 22689130  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 11544660 - 11544748
Alignment:
Q  67 gtctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagttatgtgcctaggtttaatgaga 155  Q
    |||||| ||||||||||| |||||||||||  || |||||||  ||||||||||||||||||||  || ||||||||| || |||||||    
T  11544660 gtctattgagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgttccagcttgtgtgcctagattcaatgaga 11544748  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 39191533 - 39191414
Alignment:
Q  34 ttgagagtttctgagtaagttggatttgagtctgtctatagagcaatatctcccacatagagtctctttgcaattcagaatggatcaagatgttccaagt 133  Q
    ||||||||||| |||  |||||| |||||    |||||| ||||||||||| |||||||||||  || |||||||  ||||||||||||||||||||  |    
T  39191533 ttgagagtttcggagctagttggttttga----gtctattgagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgttccagat 39191438  T
Q  134 tatgtgcctaggtttaatgagact 157  Q
    | ||||||||| || |||||||||    
T  39191437 tgtgtgcctagattcaatgagact 39191414  T

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