View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4551_high_2 (Length: 399)

Name: NF4551_high_2
Description: NF4551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4551_high_2
NF4551_high_2
[»] chr5 (52 HSPs)
chr5 (69-389)||(8673538-8673858)
chr5 (69-187)||(14744712-14744830)
chr5 (83-188)||(21260879-21260984)
chr5 (69-146)||(31107931-31108008)
chr5 (72-173)||(36476768-36476869)
chr5 (69-187)||(8654107-8654225)
chr5 (74-188)||(25253091-25253205)
chr5 (74-188)||(25316881-25316995)
chr5 (83-188)||(14745462-14745567)
chr5 (69-150)||(22870481-22870562)
chr5 (72-173)||(36477372-36477473)
chr5 (69-173)||(20072865-20072969)
chr5 (69-176)||(20856932-20857039)
chr5 (69-188)||(32052489-32052608)
chr5 (69-187)||(25253352-25253470)
chr5 (69-187)||(25317143-25317261)
chr5 (69-146)||(21978994-21979071)
chr5 (83-188)||(33735578-33735683)
chr5 (72-188)||(21977998-21978114)
chr5 (74-173)||(18934718-18934817)
chr5 (76-150)||(22869612-22869686)
chr5 (69-187)||(32052224-32052342)
chr5 (83-188)||(8323070-8323175)
chr5 (83-188)||(22533655-22533760)
chr5 (83-136)||(25253210-25253263)
chr5 (95-188)||(37945020-37945113)
chr5 (68-173)||(39181792-39181897)
chr5 (73-173)||(16532897-16532997)
chr5 (69-173)||(39181057-39181161)
chr5 (68-187)||(12991054-12991173)
chr5 (69-187)||(37945260-37945377)
chr5 (83-136)||(6421829-6421882)
chr5 (83-136)||(12990912-12990965)
chr5 (83-136)||(13064533-13064586)
chr5 (83-136)||(18013736-18013789)
chr5 (87-136)||(25317000-25317049)
chr5 (83-136)||(33735520-33735573)
chr5 (83-187)||(7015522-7015626)
chr5 (74-146)||(31108361-31108432)
chr5 (68-187)||(13064675-13064794)
chr5 (69-176)||(20857540-20857647)
chr5 (83-126)||(22024077-22024120)
chr5 (114-185)||(39402132-39402203)
chr5 (89-187)||(8323322-8323420)
chr5 (83-184)||(14745582-14745683)
chr5 (68-173)||(16533621-16533726)
chr5 (68-121)||(18934852-18934905)
chr5 (91-188)||(22024135-22024232)
chr5 (68-117)||(27753671-27753720)
chr5 (83-136)||(32052431-32052484)
chr5 (95-188)||(41339618-41339711)
chr5 (72-188)||(21972093-21972208)
[»] chr8 (59 HSPs)
chr8 (69-185)||(29574742-29574858)
chr8 (69-187)||(4463408-4463526)
chr8 (72-188)||(29575866-29575982)
chr8 (68-188)||(4970124-4970244)
chr8 (69-187)||(38598964-38599082)
chr8 (69-171)||(25288074-25288176)
chr8 (81-303)||(7393011-7393233)
chr8 (69-142)||(36574817-36574890)
chr8 (76-156)||(24379009-24379089)
chr8 (68-187)||(27436562-27436681)
chr8 (69-188)||(33497597-33497716)
chr8 (68-156)||(24377180-24377268)
chr8 (98-188)||(33497045-33497135)
chr8 (68-185)||(27437503-27437620)
chr8 (68-138)||(38600265-38600335)
chr8 (69-185)||(4462139-4462241)
chr8 (72-141)||(36576029-36576098)
chr8 (69-173)||(34213764-34213868)
chr8 (69-173)||(34665770-34665874)
chr8 (74-188)||(1231531-1231645)
chr8 (92-173)||(9632351-9632432)
chr8 (83-188)||(11478159-11478264)
chr8 (74-187)||(27857008-27857121)
chr8 (83-136)||(36623560-36623613)
chr8 (83-136)||(37342989-37343042)
chr8 (83-188)||(40422425-40422530)
chr8 (74-187)||(41801821-41801934)
chr8 (83-136)||(43866835-43866888)
chr8 (69-188)||(36623618-36623737)
chr8 (89-188)||(37343047-37343146)
chr8 (69-188)||(43866711-43866830)
chr8 (69-150)||(1232818-1232897)
chr8 (88-138)||(9632618-9632668)
chr8 (83-188)||(7658-7763)
chr8 (83-136)||(547642-547695)
chr8 (83-188)||(20096034-20096139)
chr8 (83-188)||(23424526-23424631)
chr8 (83-136)||(25287916-25287969)
chr8 (69-173)||(34214524-34214629)
chr8 (74-138)||(26740033-26740097)
chr8 (114-185)||(7392253-7392324)
chr8 (68-187)||(23424778-23424897)
chr8 (83-126)||(41251257-41251300)
chr8 (109-188)||(41802081-41802160)
chr8 (68-187)||(43866977-43867096)
chr8 (83-117)||(11478288-11478322)
chr8 (83-117)||(29190366-29190400)
chr8 (73-151)||(34666558-34666636)
chr8 (69-187)||(36623352-36623470)
chr8 (90-188)||(40525528-40525626)
chr8 (69-187)||(41182162-41182280)
chr8 (74-135)||(7398-7459)
chr8 (83-136)||(13566534-13566587)
chr8 (83-136)||(20096144-20096197)
chr8 (83-156)||(20096321-20096394)
chr8 (83-136)||(23424636-23424689)
chr8 (83-136)||(40525631-40525684)
chr8 (74-126)||(7591-7643)
chr8 (88-136)||(40422372-40422420)
[»] chr7 (44 HSPs)
chr7 (69-185)||(31695598-31695714)
chr7 (72-188)||(31694474-31694590)
chr7 (69-187)||(12929287-12929405)
chr7 (69-187)||(12930772-12930890)
chr7 (68-149)||(40021490-40021571)
chr7 (69-148)||(38643550-38643629)
chr7 (69-147)||(40022551-40022628)
chr7 (83-187)||(27558118-27558222)
chr7 (69-188)||(37284109-37284228)
chr7 (69-147)||(4227194-4227272)
chr7 (69-171)||(7158231-7158333)
chr7 (73-173)||(22661361-22661461)
chr7 (69-188)||(37289291-37289410)
chr7 (69-156)||(12643100-12643187)
chr7 (83-173)||(27557862-27557952)
chr7 (84-185)||(7159197-7159297)
chr7 (83-188)||(12931003-12931108)
chr7 (88-188)||(5636045-5636144)
chr7 (69-173)||(27479987-27480091)
chr7 (82-136)||(26825836-26825890)
chr7 (69-171)||(43937894-43937996)
chr7 (68-126)||(47121411-47121469)
chr7 (69-150)||(4226125-4226206)
chr7 (83-136)||(12929461-12929514)
chr7 (83-136)||(12930945-12930998)
chr7 (83-136)||(27557972-27558025)
chr7 (83-136)||(34454687-34454740)
chr7 (69-146)||(45915831-45915908)
chr7 (74-146)||(12644156-12644228)
chr7 (97-173)||(19979979-19980054)
chr7 (69-173)||(27480743-27480847)
chr7 (88-180)||(34454503-34454595)
chr7 (131-187)||(47738979-47739035)
chr7 (69-188)||(12929519-12929638)
chr7 (88-187)||(37563373-37563472)
chr7 (89-136)||(45586584-45586631)
chr7 (82-136)||(20947317-20947371)
chr7 (82-136)||(43938100-43938154)
chr7 (83-188)||(34454745-34454850)
chr7 (83-136)||(37563561-37563614)
chr7 (68-153)||(38644676-38644761)
chr7 (69-150)||(47558030-47558111)
chr7 (68-136)||(15827913-15827981)
chr7 (131-187)||(47733082-47733138)
[»] chr4 (50 HSPs)
chr4 (69-187)||(13336820-13336938)
chr4 (69-185)||(9254406-9254522)
chr4 (69-177)||(22882319-22882427)
chr4 (69-177)||(22933983-22934091)
chr4 (68-188)||(22881166-22881286)
chr4 (68-188)||(22932830-22932950)
chr4 (69-185)||(53477064-53477180)
chr4 (68-156)||(54591591-54591679)
chr4 (74-187)||(54590148-54590261)
chr4 (72-173)||(38982592-38982693)
chr4 (69-149)||(23455709-23455789)
chr4 (126-187)||(13232671-13232732)
chr4 (69-150)||(23454954-23455035)
chr4 (69-173)||(56556582-56556686)
chr4 (83-173)||(35730941-35731031)
chr4 (68-150)||(38813553-38813635)
chr4 (83-136)||(22249940-22249993)
chr4 (69-173)||(52815663-52815767)
chr4 (83-138)||(50246173-50246228)
chr4 (74-173)||(56557321-56557420)
chr4 (69-187)||(13872069-13872187)
chr4 (69-187)||(22249733-22249851)
chr4 (69-187)||(53559653-53559771)
chr4 (83-188)||(8286946-8287051)
chr4 (83-136)||(12691530-12691583)
chr4 (74-187)||(12691671-12691784)
chr4 (83-136)||(13872276-13872329)
chr4 (83-136)||(47862276-47862329)
chr4 (83-136)||(53559511-53559564)
chr4 (83-188)||(54961445-54961550)
chr4 (69-173)||(38814323-38814427)
chr4 (69-173)||(52816419-52816523)
chr4 (69-188)||(22249998-22250117)
chr4 (74-117)||(33294287-33294330)
chr4 (83-138)||(37677862-37677917)
chr4 (69-188)||(55013070-55013188)
chr4 (69-187)||(33294409-33294527)
chr4 (83-136)||(20086644-20086697)
chr4 (88-173)||(27813068-27813153)
chr4 (92-173)||(32846385-32846466)
chr4 (83-136)||(34238594-34238647)
chr4 (83-136)||(35730868-35730921)
chr4 (83-136)||(37678055-37678108)
chr4 (83-156)||(47862166-47862239)
chr4 (83-136)||(47980809-47980862)
chr4 (83-136)||(50245871-50245924)
chr4 (83-187)||(19916670-19916774)
chr4 (95-171)||(20086463-20086539)
chr4 (5-45)||(28560160-28560200)
chr4 (74-138)||(54961746-54961810)
[»] chr1 (59 HSPs)
chr1 (69-189)||(52563651-52563771)
chr1 (72-187)||(6344258-6344373)
chr1 (69-149)||(32238699-32238779)
chr1 (69-188)||(6345618-6345737)
chr1 (72-177)||(36381414-36381519)
chr1 (83-188)||(33347681-33347786)
chr1 (68-187)||(51935181-51935300)
chr1 (68-188)||(2953729-2953849)
chr1 (72-188)||(32619387-32619503)
chr1 (74-144)||(25064938-25065008)
chr1 (69-187)||(52564933-52565051)
chr1 (68-173)||(46282070-46282175)
chr1 (83-188)||(46849923-46850028)
chr1 (74-187)||(49002881-49002994)
chr1 (97-173)||(10019653-10019729)
chr1 (69-153)||(13295135-13295219)
chr1 (83-187)||(19755671-19755775)
chr1 (73-173)||(46282789-46282889)
chr1 (69-172)||(2828193-2828296)
chr1 (74-172)||(2829536-2829641)
chr1 (69-187)||(1047470-1047588)
chr1 (74-188)||(36380189-36380300)
chr1 (87-173)||(46545011-46545097)
chr1 (83-188)||(739233-739338)
chr1 (83-188)||(24701534-24701639)
chr1 (69-146)||(28534820-28534896)
chr1 (83-188)||(49003140-49003245)
chr1 (88-188)||(5183771-5183871)
chr1 (92-188)||(29980903-29980999)
chr1 (83-187)||(37152552-37152656)
chr1 (69-173)||(49093041-49093145)
chr1 (73-149)||(50062968-50063044)
chr1 (68-187)||(29043021-29043140)
chr1 (89-188)||(46364840-46364939)
chr1 (74-156)||(5926524-5926606)
chr1 (72-150)||(32622375-32622453)
chr1 (83-136)||(6056500-6056553)
chr1 (83-136)||(12577219-12577272)
chr1 (83-188)||(12577277-12577382)
chr1 (83-136)||(29042879-29042932)
chr1 (83-136)||(46364782-46364835)
chr1 (68-136)||(10019565-10019633)
chr1 (88-188)||(33030353-33030453)
chr1 (69-188)||(6056376-6056495)
chr1 (83-126)||(33347623-33347666)
chr1 (69-136)||(46364574-46364641)
chr1 (69-187)||(739484-739602)
chr1 (82-136)||(1040422-1040476)
chr1 (82-136)||(1047328-1047382)
chr1 (83-117)||(26953308-26953342)
chr1 (83-117)||(29980845-29980879)
chr1 (69-187)||(33347416-33347534)
chr1 (90-187)||(5183527-5183624)
chr1 (83-136)||(5183713-5183766)
chr1 (83-136)||(19755612-19755665)
chr1 (83-112)||(49003082-49003111)
chr1 (68-121)||(52454947-52455000)
chr1 (69-141)||(13295608-13295680)
chr1 (74-146)||(25065981-25066053)
[»] chr2 (51 HSPs)
chr2 (76-185)||(19620777-19620886)
chr2 (69-142)||(43236504-43236577)
chr2 (71-189)||(33882854-33882970)
chr2 (69-142)||(7983837-7983910)
chr2 (69-187)||(20101770-20101888)
chr2 (72-189)||(33881578-33881695)
chr2 (69-142)||(43237747-43237820)
chr2 (69-149)||(23206428-23206508)
chr2 (69-149)||(23678032-23678112)
chr2 (68-146)||(25624456-25624534)
chr2 (69-188)||(24387351-24387470)
chr2 (81-187)||(855379-855484)
chr2 (69-187)||(20103126-20103244)
chr2 (68-150)||(25623287-25623369)
chr2 (69-142)||(7981048-7981120)
chr2 (83-188)||(9694007-9694112)
chr2 (83-188)||(28599441-28599546)
chr2 (69-173)||(20982524-20982628)
chr2 (69-173)||(29957817-29957921)
chr2 (69-188)||(1149937-1150056)
chr2 (69-187)||(16366963-16367081)
chr2 (83-188)||(16367228-16367333)
chr2 (83-188)||(20911144-20911249)
chr2 (68-173)||(20983257-20983362)
chr2 (69-149)||(24388276-24388356)
chr2 (69-149)||(23183595-23183679)
chr2 (69-149)||(23594852-23594936)
chr2 (69-188)||(32519155-32519274)
chr2 (69-187)||(1150203-1150321)
chr2 (68-166)||(10446831-10446929)
chr2 (69-171)||(43681856-43681958)
chr2 (83-136)||(8089576-8089629)
chr2 (126-187)||(13646137-13646198)
chr2 (126-187)||(13652075-13652136)
chr2 (83-136)||(32519279-32519332)
chr2 (69-136)||(45663701-45663768)
chr2 (83-117)||(22731739-22731773)
chr2 (68-150)||(29958566-29958648)
chr2 (69-187)||(32519421-32519539)
chr2 (69-187)||(37984993-37985111)
chr2 (81-123)||(43682183-43682225)
chr2 (83-136)||(1150061-1150114)
chr2 (91-188)||(8089474-8089571)
chr2 (83-136)||(9959032-9959085)
chr2 (83-136)||(16367170-16367223)
chr2 (83-188)||(17366640-17366745)
chr2 (74-187)||(18476912-18477025)
chr2 (87-136)||(20911254-20911303)
chr2 (68-117)||(22309623-22309672)
chr2 (83-136)||(41846599-41846652)
chr2 (83-135)||(22309749-22309801)
[»] scaffold0009 (2 HSPs)
scaffold0009 (69-172)||(261001-261104)
scaffold0009 (69-185)||(262425-262541)
[»] scaffold1493 (2 HSPs)
scaffold1493 (69-171)||(593-695)
scaffold1493 (83-136)||(800-853)
[»] chr6 (40 HSPs)
chr6 (75-156)||(8427378-8427459)
chr6 (69-187)||(17784367-17784485)
chr6 (68-185)||(8427199-8427316)
chr6 (74-173)||(3299839-3299938)
chr6 (69-172)||(33401123-33401226)
chr6 (83-188)||(31386813-31386918)
chr6 (69-187)||(5064335-5064453)
chr6 (68-173)||(33399965-33400070)
chr6 (68-188)||(737962-738082)
chr6 (69-188)||(13480208-13480327)
chr6 (69-187)||(15819756-15819874)
chr6 (74-136)||(20561125-20561187)
chr6 (88-186)||(22494147-22494245)
chr6 (69-173)||(4116799-4116903)
chr6 (69-173)||(4117543-4117647)
chr6 (69-173)||(14656480-14656584)
chr6 (68-187)||(23292010-23292129)
chr6 (83-181)||(9607588-9607686)
chr6 (69-171)||(30234874-30234976)
chr6 (83-136)||(23291868-23291921)
chr6 (91-187)||(3299581-3299677)
chr6 (83-135)||(13480333-13480385)
chr6 (88-136)||(16706968-16707016)
chr6 (88-136)||(19296439-19296487)
chr6 (74-173)||(1661426-1661525)
chr6 (83-138)||(16704624-16704679)
chr6 (82-136)||(3299765-3299819)
chr6 (74-188)||(5064600-5064714)
chr6 (69-187)||(13480474-13480592)
chr6 (83-117)||(32337707-32337741)
chr6 (83-136)||(737904-737957)
chr6 (83-188)||(7612562-7612667)
chr6 (83-136)||(21880571-21880624)
chr6 (83-136)||(22494004-22494057)
chr6 (83-188)||(31879472-31879576)
chr6 (83-188)||(32337578-32337683)
chr6 (90-171)||(32337849-32337930)
chr6 (83-135)||(5064542-5064594)
chr6 (69-173)||(14657205-14657309)
chr6 (69-117)||(20560928-20560976)
[»] scaffold0279 (3 HSPs)
scaffold0279 (83-187)||(10867-10971)
scaffold0279 (83-173)||(11137-11227)
scaffold0279 (83-136)||(11064-11117)
[»] chr3 (36 HSPs)
chr3 (69-188)||(22736671-22736790)
chr3 (69-187)||(1741387-1741505)
chr3 (69-150)||(32717124-32717205)
chr3 (72-188)||(44481934-44482050)
chr3 (69-150)||(29193012-29193093)
chr3 (72-173)||(37249202-37249303)
chr3 (68-173)||(45279280-45279385)
chr3 (74-187)||(55036935-55037048)
chr3 (72-188)||(44476052-44476168)
chr3 (68-173)||(11026628-11026733)
chr3 (83-136)||(21300340-21300393)
chr3 (72-173)||(37249794-37249894)
chr3 (83-188)||(40256888-40256993)
chr3 (83-188)||(53037041-53037146)
chr3 (69-173)||(1757300-1757404)
chr3 (69-173)||(2944662-2944766)
chr3 (73-173)||(45278548-45278648)
chr3 (73-173)||(48188382-48188482)
chr3 (83-187)||(55036683-55036787)
chr3 (74-171)||(10998155-10998252)
chr3 (69-150)||(29192035-29192116)
chr3 (83-136)||(40256998-40257051)
chr3 (83-136)||(55036793-55036846)
chr3 (83-135)||(30654498-30654550)
chr3 (90-166)||(46670542-46670618)
chr3 (69-173)||(48189095-48189199)
chr3 (83-173)||(1756564-1756654)
chr3 (90-188)||(21255796-21255894)
chr3 (83-173)||(43105830-43105920)
chr3 (88-138)||(46670267-46670317)
chr3 (83-136)||(10749442-10749495)
chr3 (83-136)||(10997998-10998051)
chr3 (83-136)||(11312942-11312995)
chr3 (83-136)||(21255738-21255791)
chr3 (83-136)||(22129130-22129183)
chr3 (83-136)||(53037151-53037204)
[»] scaffold0347 (2 HSPs)
scaffold0347 (68-150)||(13608-13690)
scaffold0347 (74-150)||(14612-14688)
[»] scaffold0182 (2 HSPs)
scaffold0182 (69-187)||(14359-14477)
scaffold0182 (69-187)||(13134-13252)
[»] scaffold0018 (1 HSPs)
scaffold0018 (68-188)||(73108-73228)
[»] scaffold0206 (1 HSPs)
scaffold0206 (83-188)||(10339-10444)
[»] scaffold0321 (2 HSPs)
scaffold0321 (83-136)||(10786-10839)
scaffold0321 (69-136)||(10979-11046)
[»] scaffold0201 (1 HSPs)
scaffold0201 (83-126)||(14100-14143)
[»] scaffold0202 (2 HSPs)
scaffold0202 (83-149)||(14249-14315)
scaffold0202 (88-138)||(14549-14599)
[»] scaffold0233 (1 HSPs)
scaffold0233 (95-188)||(8459-8552)


Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 69 - 389
Target Start/End: Complemental strand, 8673858 - 8673538
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  8673858 ggctaaaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttgcaattgttaatcatt 8673759  T
Q  169 tgaaatttgatcctaattacgnnnnnnngatgaggtggaggatgattagatacatggcgtctaagtggcaagtggtgactaggtattactcaagccacat 268  Q
    |||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8673758 tgaaatttcatcctaattacgtttttttgatgaggtggaggatgattagatacatggcgtctaagtggcaagtggtgactgggtattactcaagccacat 8673659  T
Q  269 cagccaaacagatatcaaatgacttttttgcccttgattaacacatacacaagtgaaatgacaattttgccctcctatcttcttccctcattgtcacgct 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8673658 cagccaaacagatatcaaatgacttttttgcccttgattaacacatacacaagtgaaatgacaattttgccctcctatcttcttccctcattgtcacgct 8673559  T
Q  369 tttccttcttcgtcatctgtg 389  Q
    || ||||||||||||||||||    
T  8673558 ttcccttcttcgtcatctgtg 8673538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 14744830 - 14744712
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||| |||| |||||||||  |||||||| ||||||| |||||||||||||||||||| ||||| | ||||||| |    
T  14744830 ggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 14744731  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||| |||  |||||||||    
T  14744730 tgaattttcgtcctaatta 14744712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 21260879 - 21260984
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| |||||||||| |||||| | ||||||| ||||||  ||||| |    
T  21260879 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatgatcat 21260978  T
Q  183 aattac 188  Q
    ||||||    
T  21260979 aattac 21260984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 31107931 - 31108008
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    |||| ||||||||||||||||||||||| |||||| |||||||  |||||||| ||||||| ||||||||||||||||    
T  31107931 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 31108008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 36476768 - 36476869
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| |||||||||||||| |||||| | |||||  |||||||| ||| ||| ||||||||||||||||||||||| ||||  |||||| ||||    
T  36476768 taaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttga 36476867  T
Q  172 aa 173  Q
    ||    
T  36476868 aa 36476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 8654107 - 8654225
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || ||||||||||||||  |||||||| ||| ||| ||||||||||||||||| || |||||||  |||||| |    
T  8654107 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgcaattactaatcatt 8654206  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||| ||  |||||||||    
T  8654207 tgaaaattcgtcctaatta 8654225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 25253091 - 25253205
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||| ||| ||||||| ||||| | ||||||| ||||      
T  25253091 aaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgact 25253190  T
Q  174 tttgatcctaattac 188  Q
    |||| ||||||||||    
T  25253191 tttggtcctaattac 25253205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 25316881 - 25316995
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||| ||| ||||||| ||||| | ||||||| ||||      
T  25316881 aaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgact 25316980  T
Q  174 tttgatcctaattac 188  Q
    |||| ||||||||||    
T  25316981 tttggtcctaattac 25316995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 14745462 - 14745567
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||||||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| ||||    
T  14745462 tttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 14745561  T
Q  183 aattac 188  Q
    ||||||    
T  14745562 aattac 14745567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 22870562 - 22870481
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||| ||| ||| ||||||||||||||||||||    
T  22870562 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 22870481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 36477473 - 36477372
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| |||||||||||||| |||||| | |||||  |||||||| ||| ||| |||||||||||||||||||| || ||||  |||||| ||||    
T  36477473 taaaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttga 36477374  T
Q  172 aa 173  Q
    ||    
T  36477373 aa 36477372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 20072969 - 20072865
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||||| |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  20072969 ggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20072870  T
Q  169 tgaaa 173  Q
    |||||    
T  20072869 tgaaa 20072865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 20856932 - 20857039
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||| ||| |||||||||||||||||||| || ||  |||||||| |    
T  20856932 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857031  T
Q  169 tgaaattt 176  Q
    ||||||||    
T  20857032 tgaaattt 20857039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 32052608 - 32052489
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| |    
T  32052608 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 32052509  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  32052508 tgacttttggtcctaattac 32052489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 25253470 - 25253352
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||||||||| |  |||||| |    
T  25253470 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatt 25253371  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  25253370 tgacttttggtcctaatta 25253352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 25317261 - 25317143
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||||||||| |  |||||| |    
T  25317261 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatt 25317162  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  25317161 tgacttttggtcctaatta 25317143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 21979071 - 21978994
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    |||| ||||||||||||||||||||||| |||| | |||||||  ||||||||| |||||| |||||||||| |||||    
T  21979071 ggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctatttt 21978994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 33735683 - 33735578
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| ||||    
T  33735683 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 33735584  T
Q  183 aattac 188  Q
    ||||||    
T  33735583 aattac 33735578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 21978114 - 21977998
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| ||||||||||| || ||| || |||||||  |||||||| ||| ||| |||||||||||| ||||||| || ||||  |||||| ||||    
T  21978114 taaaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcatttga 21978015  T
Q  172 aatttgatcctaattac 188  Q
    || ||  ||||||||||    
T  21978014 aaattcgtcctaattac 21977998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 18934718 - 18934817
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  ||||||||||||||||||| |||||||||| |||| ||| |||| || ||||||||  ||||||||| |||||| | ||| ||| ||||||    
T  18934718 aaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcatttgaaa 18934817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 22869612 - 22869686
Alignment:
Q  76 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    ||||||||||||||| || || |||||| |||||||  |||||||| ||| ||| ||||||||||||||||||||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 22869686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 32052224 - 32052342
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||| |||||||||||||||||| |||| ||| |||| || |||||||| ||| |  |||| ||||| | ||||||| |    
T  32052224 ggcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatt 32052323  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  ||||||||||||||    
T  32052324 tgacttttgatcctaatta 32052342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 8323070 - 8323175
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    ||||||||||  |||||||||||||||||| |||| ||| |||| || |||||||| |||||||||| ||| |  | ||||||| ||||||  ||||| |    
T  8323070 tttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcatttgaaaaatgatcat 8323169  T
Q  183 aattac 188  Q
    ||||||    
T  8323170 aattac 8323175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 22533760 - 22533655
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| |||  ||| || |||||||| | || ||||| |||||| | ||||||| ||||||  || ||||    
T  22533760 tttcgtccctgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatttgaaaaatggtcct 22533661  T
Q  183 aattac 188  Q
    ||||||    
T  22533660 aattac 22533655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 25253263 - 25253210
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  25253263 tttcatccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 25253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 37945020 - 37945113
Alignment:
Q  95 aaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||||||||||||||||| |||| ||| |||| || |||||||| ||| ||||||| ||||| | ||||||| ||||  |||| ||||||||||    
T  37945020 aaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaattac 37945113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 39181897 - 39181792
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  ||| ||||||| || |||||||| |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  ||||||     
T  39181897 tggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 39181798  T
Q  168 ttgaaa 173  Q
    ||||||    
T  39181797 ttgaaa 39181792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 16532897 - 16532997
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaa 172  Q
    ||||||||| ||||||||||| || |||||| | |||||  |||||||| |||||||  ||||||| ||||||||||| || ||||  |||||| |||||    
T  16532897 aaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaa 16532996  T
Q  173 a 173  Q
    |    
T  16532997 a 16532997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 39181057 - 39181161
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||| | | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  39181057 ggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 39181156  T
Q  169 tgaaa 173  Q
    |||||    
T  39181157 tgaaa 39181161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 12991173 - 12991054
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| |||||||||||||| |||||||||| |||| ||  |||| || |||||||| ||| | | ||| ||||| | |||||||     
T  12991173 tggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatcat 12991074  T
Q  168 ttgaaatttgatcctaatta 187  Q
    ||||  ||||||||||||||    
T  12991073 ttgacttttgatcctaatta 12991054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 37945377 - 37945260
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||| ||||| |||| ||| |||| || ||||||||  || | ||||||||||| | ||||||| |    
T  37945377 ggcttaaatatgtctttcgtccctgcaaatataggtca-ttgaattttcgtccctgaagttactaatcctttcaatctgcccttgcaaatattaatcatt 37945279  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  ||||||| ||||||    
T  37945278 tgacttttgatcataatta 37945260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 6421829 - 6421882
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  6421829 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 6421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 12990965 - 12990912
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  12990965 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 13064586 - 13064533
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  13064586 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 13064533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 18013789 - 18013736
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  18013789 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 18013736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 25317049 - 25317000
Alignment:
Q  87 atccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  25317049 atccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 25317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 33735520 - 33735573
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  33735520 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 33735573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 7015522 - 7015626
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||| |||||||| |||||||| |||| || |||||| | ||| | ||||  ||||| | ||||||| ||||  |||| ||||    
T  7015522 tttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttgacttttggtcct 7015621  T
Q  183 aatta 187  Q
    |||||    
T  7015622 aatta 7015626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 31108432 - 31108361
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    ||||||| |||||||||||||||||||| | |||||||  |||||||| ||||||| |||||| | |||||||    
T  31108432 aaatatgtatttcatccctgcaaatata-gacatttgatttttcatccatgaacttactaatctttccatttt 31108361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 13064794 - 13064675
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| |||||||||||||| |||||||||| |||| ||  | || || |||||||| ||| | ||||| ||||| | |||||||     
T  13064794 tggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatcat 13064695  T
Q  168 ttgaaatttgatcctaatta 187  Q
    ||||  |||| |||||||||    
T  13064694 ttgacttttggtcctaatta 13064675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 20857647 - 20857540
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||| || || |||||| | |||||  |||||| | | | ||| |||||||||||||||||||| || ||  |||||||| |    
T  20857647 ggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857548  T
Q  169 tgaaattt 176  Q
    ||||||||    
T  20857547 tgaaattt 20857540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 22024077 - 22024120
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaa 126  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||    
T  22024077 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaa 22024120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 39402203 - 39402132
Alignment:
Q  114 tttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaat 185  Q
    |||||||| || |||| |||||||||||||||||||| ||||| | ||||||| ||||  |||| |||||||    
T  39402203 tttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcatttgagttttggtcctaat 39402132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 8323420 - 8323322
Alignment:
Q  89 ccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    ||||||||||||| |  ||||||| |||| |||||||| || ||||| ||  ||||||||| |||||| | ||||||| ||||  |||| |||||||||    
T  8323420 ccctgcaaatatatgctatttgaattttcgtccttgaagttactaattctttcattttgccattgcaaatattaatcatttgacttttggtcctaatta 8323322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 14745683 - 14745582
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||| |||||||||| |||||||| |||| ||  |||| || |||||||| ||| | ||||||||||| | ||||||| ||||  |||| ||||    
T  14745683 tttcgtccctacaaatataggccatttgaattttcgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcct 14745584  T
Q  183 aa 184  Q
    ||    
T  14745583 aa 14745582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 16533726 - 16533621
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| ||||||||||  || |||||| | |||||  |||||||  |||||||  ||||||| ||||||||||| || ||||  ||||||     
T  16533726 tggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcat 16533627  T
Q  168 ttgaaa 173  Q
    ||||||    
T  16533626 ttgaaa 16533621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 18934905 - 18934852
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatcc 121  Q
    ||||| ||||| | ||||| |||||| |||||||||||||||||| ||||||||    
T  18934905 tggcttaaataggtatttcgtccctgtaaatataggtcatttgaattttcatcc 18934852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 22024232 - 22024135
Alignment:
Q  91 ctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||||||||||||||||||||| |||| ||  | || || |||||||| ||| ||||||  ||||| | ||||||| ||||||  || ||||||||||    
T  22024232 ctgcaaatataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatattaatcatttgaaaaatggtcctaattac 22024135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 27753671 - 27753720
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttc 117  Q
    ||||| |||||||  |||| ||||||||||||||||||||||||| ||||    
T  27753671 tggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttc 27753720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 32052431 - 32052484
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||| ||||||||| |||| ||| |||| || ||||||    
T  32052431 tttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatc 32052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 41339711 - 41339618
Alignment:
Q  95 aaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||||||||||||||||| |||| ||| | || || |||||| | |||||||||| | |||| | ||||||| ||||||  || ||||||||||    
T  41339711 aaatataggtcatttgaattttcgtccataaagttactaatcattccattttgccatcgcaaatattaatcatttgaaaaatggtcctaattac 41339618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 21972093 - 21972208
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||  ||||||||||| || ||| || |||||||  |||||||||  | ||| |||||||||||||||||| | || ||||  |||||| ||||    
T  21972093 taaaatatgtttttcatccctgtaattatgggccatttgatttttcatcctc-agcttactaatcctcccattttgctcctgtaattactaatcatttga 21972191  T
Q  172 aatttgatcctaattac 188  Q
    || ||  ||||||||||    
T  21972192 aaattcgtcctaattac 21972208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 29574742 - 29574858
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||  || |||||||||||||||||    
T  29574742 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcact 29574841  T
Q  169 tgaaatttgatcctaat 185  Q
    ||||||||| |||||||    
T  29574842 tgaaatttggtcctaat 29574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 4463526 - 4463408
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||||| ||| |  || |||||||||||||||||    
T  4463526 ggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcctattctttccctgcaattgttaatcact 4463427  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||||||| |||||||||    
T  4463426 tgaaatttggtcctaatta 4463408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 29575982 - 29575866
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | || || |||||||||||||| |  || ||||||||||||||||||||    
T  29575982 taaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcacttga 29575883  T
Q  172 aatttgatcctaattac 188  Q
    |||||| ||||||||||    
T  29575882 aatttggtcctaattac 29575866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 4970124 - 4970244
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||| | |||| ||     
T  4970124 tggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcat 4970223  T
Q  168 ttgaaatttgatcctaattac 188  Q
    |||||||||  ||||||||||    
T  4970224 ttgaaatttagtcctaattac 4970244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 38598964 - 38599082
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||| |||||| |||||||  |||||||| ||||||| ||||||||| |||||||||| ||||| | ||||||| |    
T  38598964 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 38599063  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||| ||  |||||||||    
T  38599064 tgaaaattcgtcctaatta 38599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 25288176 - 25288074
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||||||||||| |||||| ||||||||||||||  |||||||| ||||||| ||||||||| |||||||||| ||||| | ||||||| |    
T  25288176 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 25288077  T
Q  169 tga 171  Q
    |||    
T  25288076 tga 25288074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 303
Target Start/End: Complemental strand, 7393233 - 7393011
Alignment:
Q  81 catttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatc 180  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||||| ||||||||||||||||  || ||||| | ||||||| |||||||||  ||    
T  7393233 catttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtc 7393134  T
Q  181 ctaattacgnnnnnnngatgaggtggaggatgattagatacatggcgtctaagtggcaagtggtgactaggtattactcaagccacatcagccaaacaga 280  Q
    ||||| ||        | ||||||||||  |||||||  || |||||  |  |||||||||  ||| | ||||| ||||||||||| | ||| || | ||    
T  7393133 ctaatcacaattgtttgctgaggtggagagtgattagcaacgtggcgcatccgtggcaagtactgattgggtatgactcaagccaccttagcaaagctga 7393034  T
Q  281 tatcaaatgacttttttgccctt 303  Q
    ||| ||||||| |||||||||||    
T  7393033 tatgaaatgacatttttgccctt 7393011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 36574817 - 36574890
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccca 142  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  36574817 ggctaaaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 24379089 - 24379009
Alignment:
Q  76 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctgcaa 24379009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 27436562 - 27436681
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |||| ||| |||| || |||||| |  |||||||||  |||||||  ||||||     
T  27436562 tggcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcat 27436661  T
Q  168 ttgaaatttgatcctaatta 187  Q
    |||||||||  |||||||||    
T  27436662 ttgaaatttagtcctaatta 27436681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 33497716 - 33497597
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| |||||||  |||||||| ||| ||| |||||||||||||||||||| |||||||  |||||| |    
T  33497716 ggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctgcaattactaatcatt 33497617  T
Q  169 tgaaatttgatcctaattac 188  Q
    ||||| ||  ||||||||||    
T  33497616 tgaaaattcgtcctaattac 33497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 24377180 - 24377268
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    ||||||||||||||||||||| | ||||| ||  ||||||||||| |||||||| ||||||| |||||||||||||||| ||| |||||    
T  24377180 tggctaaaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaa 24377268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 33497045 - 33497135
Alignment:
Q  98 tataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    ||||||||||||||  |||||| ||||||||| |||||||| |||||||||||||||||||  |||||| |||||| ||  ||||||||||    
T  33497045 tataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttgcaattactaatcatttgaaaattcgtcctaattac 33497135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 27437620 - 27437503
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||| ||| |||| || |||||| |  |||||||||  |||||||  ||||||     
T  27437620 tggcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcat 27437521  T
Q  168 ttgaaatttgatcctaat 185  Q
    |||||||||  |||||||    
T  27437520 ttgaaatttagtcctaat 27437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 38600335 - 38600265
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||||||    
T  38600335 tggcttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagttactaatcct 38600265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 4462139 - 4462241
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||| |||              |||||||| |||||||||||||| |  || |||||||||||||||||    
T  4462139 ggctaaaatatgcatttcatccctgcaaatataggccat--------------ttgaacttactaatcctcccattctttccctgcaattgttaatcact 4462224  T
Q  169 tgaaatttgatcctaat 185  Q
    ||||||||| |||||||    
T  4462225 tgaaatttggtcctaat 4462241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 36576098 - 36576029
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccc 141  Q
    ||||||||| |||||||||||| ||||||| | ||||||||||||||||| ||||||| | |||||||||    
T  36576098 taaaatatgtatttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatcctccc 36576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 34213764 - 34213868
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||||||||| |||||| | |||||  |||||||| ||| ||| |||||||||| ||||||||| || ||  |||||||| |    
T  34213764 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 34213863  T
Q  169 tgaaa 173  Q
    |||||    
T  34213864 tgaaa 34213868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 34665770 - 34665874
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  34665770 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 34665869  T
Q  169 tgaaa 173  Q
    |||||    
T  34665870 tgaaa 34665874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 1231531 - 1231645
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||||||||||||||||| ||| |||||| | |||||  |||||||| ||| ||| |||||||||||||||| ||| || ||   ||||||| ||||||    
T  1231531 aaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcatttgaaa 1231630  T
Q  174 tttgatcctaattac 188  Q
     ||  ||||||||||    
T  1231631 attcgtcctaattac 1231645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 9632351 - 9632432
Alignment:
Q  92 tgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||||||||||||||||||| |||| ||| |||| || |||||||| |||||||| | |||||| | ||||||| ||||||    
T  9632351 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaa 9632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 11478159 - 11478264
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| || ||||||||  || | ||||| ||||| | ||||||| ||||  ||||  |||    
T  11478159 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggccct 11478258  T
Q  183 aattac 188  Q
    ||||||    
T  11478259 aattac 11478264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 27857121 - 27857008
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||| | ||| | ||||||||||| | ||||||| ||||      
T  27857121 aaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatttgact 27857022  T
Q  174 tttgatcctaatta 187  Q
    |||| |||||||||    
T  27857021 tttggtcctaatta 27857008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 37342989 - 37343042
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  37342989 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 40422530 - 40422425
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || |||||||| | | | ||||  ||||| | ||||||| ||||||  || ||||    
T  40422530 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatttgaaaaatggtcct 40422431  T
Q  183 aattac 188  Q
    ||||||    
T  40422430 aattac 40422425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 41801821 - 41801934
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||| ||||||||||||||||||||||||| |||| | | |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||      
T  41801821 aaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgact 41801920  T
Q  174 tttgatcctaatta 187  Q
    ||||||| ||||||    
T  41801921 tttgatcataatta 41801934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 43866888 - 43866835
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  43866888 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 36623737 - 36623618
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || ||||| || ||| | ||||| ||||| | ||||||| |    
T  36623737 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatt 36623638  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  36623637 tgacttttggtcctaattac 36623618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 37343146 - 37343047
Alignment:
Q  89 ccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||||||||||||||||||||||| |||| ||| |||| || ||||| || ||| | ||||| ||||| | ||||||| ||||  |||| ||||||||||    
T  37343146 ccctgcaaatataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttgacttttggtcctaattac 37343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 43866711 - 43866830
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || ||||| || ||| | ||||| ||||| | ||||||| |    
T  43866711 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatt 43866810  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  43866811 tgacttttggtcctaattac 43866830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 1232897 - 1232818
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||| ||| ||||   |||||||||||||||||    
T  1232897 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttg--tatcctcccattttgccc 1232818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 9632668 - 9632618
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    ||||||||||||||||||||||||| |||| |||||||| || ||||||||    
T  9632668 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcct 9632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 7763 - 7658
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| || |    
T  7763 tttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcat 7664  T
Q  183 aattac 188  Q
    ||||||    
T  7663 aattac 7658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 547642 - 547695
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||| ||||||||||||||| |||| |||||||| || ||||||    
T  547642 tttcatccctgcaattataggtcatttgaattttcgtccttgaagttactaatc 547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 20096034 - 20096139
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||| |||||||||| |||  ||| |||| || |||||||| ||| ||||||  ||||| | ||||||| ||||  |||| ||||    
T  20096034 tttcgtccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaatcatttgacttttggtcct 20096133  T
Q  183 aattac 188  Q
    ||||||    
T  20096134 aattac 20096139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 23424526 - 23424631
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    ||||||||||| |||||||||||||||||| |||  ||| |||| || ||||| ||  || | ||||| ||||| | ||||||| ||||  |||||||||    
T  23424526 tttcatccctgtaaatataggtcatttgaatttttgtccctgaagttactaattctaacaatctgcccctgcaaatattaatcatttgacttttgatcct 23424625  T
Q  183 aattac 188  Q
    ||||||    
T  23424626 aattac 23424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 25287969 - 25287916
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  25287969 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 25287916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 34214629 - 34214524
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttca-tccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  ||||| ||| ||||||| |||||||| ||||||||||| || ||||  ||||||     
T  34214629 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcat 34214530  T
Q  168 ttgaaa 173  Q
    ||||||    
T  34214529 ttgaaa 34214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 26740097 - 26740033
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || ||||||||    
T  26740097 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 26740033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 7392253 - 7392324
Alignment:
Q  114 tttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaat 185  Q
    |||||||| ||||||| ||||||||||||||||  || ||||| | ||||||| |||||||||  |||||||    
T  7392253 tttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcctaat 7392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 23424897 - 23424778
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| | |||||||||||||| |||||||| |||| ||| |||| || |||||| | ||| | ||||| ||||| | |||||||     
T  23424897 tggcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcat 23424798  T
Q  168 ttgaaatttgatcctaatta 187  Q
    ||||  |||| |||||||||    
T  23424797 ttgatttttggtcctaatta 23424778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 41251300 - 41251257
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaa 126  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||    
T  41251300 tttcatccctgcaaatataggtcatttgaattttcgtccatgaa 41251257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 41802160 - 41802081
Alignment:
Q  109 tgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||| ||||||||||||| || |||||| | ||| ||||||| ||||| | || |||| |||| ||||||||||||||||    
T  41802160 tgaattttcatccttgaagttactaatcattccaatttgcccctgcaaatatttatcatttgacatttgatcctaattac 41802081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 43867096 - 43866977
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| |||||||||||||||  |||||||| |||| ||| |||| || ||||||||  || | ||||| ||||| | |||||||     
T  43867096 tggcttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcat 43866997  T
Q  168 ttgaaatttgatcctaatta 187  Q
    ||||  |||| |||||||||    
T  43866996 ttgacttttggtcctaatta 43866977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 11478322 - 11478288
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||||||||||||||||||||||||| ||||    
T  11478322 tttcatccctgcaaatataggtcatttgaattttc 11478288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 29190366 - 29190400
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||||||||||||||||||||||||| ||||    
T  29190366 tttcatccctgcaaatataggtcatttgaattttc 29190400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 34666636 - 34666558
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccct 151  Q
    ||||||||  ||||||| ||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||||    
T  34666636 aaaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccct 34666558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 36623352 - 36623470
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || ||||||||  || | ||| | ||||| | ||||||| |    
T  36623352 ggcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatcatt 36623451  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  36623452 tgacttttggtcctaatta 36623470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 40525528 - 40525626
Alignment:
Q  90 cctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||||||||||| |||||||||| |||| ||| |||| || |||||||| ||| | ||||  ||||| | ||||||| ||||  |||| ||||||||||    
T  40525528 cctgcaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaattac 40525626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 41182280 - 41182162
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||| |||||||||| |||| ||| |||| || |||||| |  || | ||||| ||||| | ||||||| |    
T  41182280 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatcatt 41182181  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  41182180 tgacttttggtcctaatta 41182162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 7398 - 7459
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaat 135  Q
    |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||    
T  7398 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcttccctgaagttactaat 7459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 13566587 - 13566534
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||| ||||||||| |||||||||||| |||| |||||||| || ||||||    
T  13566587 tttcatcactgcaaatacaggtcatttgaattttcgtccttgaatttactaatc 13566534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 20096197 - 20096144
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  20096197 tttcatccctacaaatataggtcatttgaattttcttccctgaagttactaatc 20096144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 20096394 - 20096321
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||||| ||| | ||||| |||||    
T  20096394 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaa 20096321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 23424689 - 23424636
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||| ||||||||| |||| ||| |||| || ||||||    
T  23424689 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaatc 23424636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 40525684 - 40525631
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||| || ||||||    
T  40525684 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 40525631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 7591 - 7643
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaa 126  Q
    ||||| || ||||||||||| |||||||||||||||||| |||| ||| ||||    
T  7591 aaataggcctttcatccctgtaaatataggtcatttgaattttcgtccctgaa 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 40422372 - 40422420
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  40422372 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 40422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 31695714 - 31695598
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||  || |||||||||||||||||    
T  31695714 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcact 31695615  T
Q  169 tgaaatttgatcctaat 185  Q
    ||||||||| |||||||    
T  31695614 tgaaatttggtcctaat 31695598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 31694474 - 31694590
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | || || |||||||||||||| |  || ||||||||||||||||||||    
T  31694474 taaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcacttga 31694573  T
Q  172 aatttgatcctaattac 188  Q
    |||||| ||||||||||    
T  31694574 aatttggtcctaattac 31694590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 12929287 - 12929405
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||||||||||  ||||||  |||||||| ||||||| |||||||||||||||||||| ||||| | ||||||| |    
T  12929287 ggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 12929386  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  12929387 tgacttttggtcctaatta 12929405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 12930772 - 12930890
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||| |||||||| ||||||||||| ||||| | ||||||| |    
T  12930772 ggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatt 12930871  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  12930872 tgacttttggtcctaatta 12930890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 40021490 - 40021571
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| || | ||||||||    
T  40021490 tggctaaaatatgcatttcatccctgtaaatataggtcatttgaaatttcatccataaacttgctaattcttctattttgcc 40021571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 38643550 - 38643629
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgc 148  Q
    |||| ||||||||||||||||||||||| |||||| |||||||  |||||||||||| ||| ||||||||||||||||||    
T  38643550 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgc 38643629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 40022628 - 40022551
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttg 147  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  40022628 ggctaaaatatgtatttcatccctgcaaatata-gtcatttgaaatttcatccctgatcttactaatccttccattttg 40022551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 27558222 - 27558118
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| |||  ||| || |||||||| |||||||||| |||||| | ||||||| ||||  |||||||||    
T  27558222 tttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttgacttttgatcct 27558123  T
Q  183 aatta 187  Q
    |||||    
T  27558122 aatta 27558118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 37284109 - 37284228
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| |||||||  |||||||| ||| ||| |||||||||||||||||||| |||||||  |||||| |    
T  37284109 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatt 37284208  T
Q  169 tgaaatttgatcctaattac 188  Q
    | ||| ||  ||||||||||    
T  37284209 ttaaaattcgtcctaattac 37284228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 4227272 - 4227194
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttg 147  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||||||| ||| |||||||||||||||||    
T  4227272 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttg 4227194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 7158231 - 7158333
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||| ||| |||||| |||||||  |||||||| ||||||| |||||||| ||||||||||| || || | ||||||| |    
T  7158231 ggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatt 7158330  T
Q  169 tga 171  Q
    |||    
T  7158331 tga 7158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 22661361 - 22661461
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaa 172  Q
    ||||||||| ||||||||||| || |||||| | |||||  |||||||||||||||| |||||||| ||||||||||| || ||||  |||||| |||||    
T  22661361 aaaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaa 22661460  T
Q  173 a 173  Q
    |    
T  22661461 a 22661461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 37289410 - 37289291
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| ||||||   |||||||| ||| ||| |||||||||||||||||||| |||||||  |||||| |    
T  37289410 ggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatt 37289311  T
Q  169 tgaaatttgatcctaattac 188  Q
    | ||| ||  ||||||||||    
T  37289310 ttaaaattcgtcctaattac 37289291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 12643100 - 12643187
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||  ||| ||| |||||||||||||||| ||| |||||    
T  12643100 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaa 12643187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 27557862 - 27557952
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||| |||||| |||||||||||||||||| |||| |||||||| ||  |||| || |||||||||| |||||| | ||||||| ||||||    
T  27557862 tttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaaa 27557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 7159297 - 7159197
Alignment:
Q  84 ttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatccta 183  Q
    ||||||||||||||||||| ||||||||| |||| | | |||| || |||||||||||||||| ||| ||||| | ||||||| ||||| |||  |||||    
T  7159297 ttcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccattttaccc-tgcaaatattaatcatttgaattttcgtccta 7159199  T
Q  184 at 185  Q
    ||    
T  7159198 at 7159197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 12931108 - 12931003
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||| ||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| ||||    
T  12931108 tttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttttggtcct 12931009  T
Q  183 aattac 188  Q
    ||||||    
T  12931008 aattac 12931003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 5636045 - 5636144
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    ||||||||||||||||||||||||| |||| ||| | || || |||||||| ||| |||||| |||||| | ||||||| ||||||  || |||||||||    
T  5636045 tccctgcaaatataggtcatttgaattttcgtccctaaagttactaatccttcca-tttgccattgcaaatattaatcatttgaaaaatggtcctaatta 5636143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 27479987 - 27480091
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||||||||| |||||| |  ||||  |||||||| ||| ||| |||||||||| ||||||||| || ||||  |||||| |    
T  27479987 ggcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatt 27480086  T
Q  169 tgaaa 173  Q
    |||||    
T  27480087 tgaaa 27480091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 26825836 - 26825890
Alignment:
Q  82 atttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  26825836 atttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 26825890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 43937894 - 43937996
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||| || |||||||||||||||||| |||||||| |||| || |||||||| ||| | ||||| ||||| | ||||||| |    
T  43937894 ggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 43937993  T
Q  169 tga 171  Q
    |||    
T  43937994 tga 43937996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 47121469 - 47121411
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaa 126  Q
    ||||| ||||| || |||||||||||||||||||||||||||||| |||| ||| ||||    
T  47121469 tggcttaaataggcctttcatccctgcaaatataggtcatttgaattttcgtccctgaa 47121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 4226125 - 4226206
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || |||||| |||||||   |||| || ||| ||| |||||||| |||||||||||    
T  4226125 ggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgccc 4226206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 12929461 - 12929514
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  12929461 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12929514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 12930945 - 12930998
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  12930945 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagtttctaatc 12930998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 27558025 - 27557972
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  27558025 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 27557972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 34454687 - 34454740
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  34454687 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 34454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 45915908 - 45915831
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||| | | ||| |||||||||| |||||    
T  45915908 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctatttt 45915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 12644228 - 12644156
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    |||||||||||||||||||  || || ||| |||||||  |||||||| ||| ||| ||||||||||||||||    
T  12644228 aaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccatttt 12644156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 19979979 - 19980054
Alignment:
Q  97 atataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||||||||||| |||||||| |||| || |||||| | |||||||||| |||||| | ||||||| ||||||    
T  19979979 atataggtcatttgaattttcatcc-tgaagttactaatcattccattttgccgttgcaaatattaatcatttgaaa 19980054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 27480847 - 27480743
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || |||||| | |||||  ||||||||||||  || |||||||| ||||||||||| || ||||  |||||| |    
T  27480847 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatt 27480748  T
Q  169 tgaaa 173  Q
    |||||    
T  27480747 tgaaa 27480743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 34454503 - 34454595
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatc 180  Q
    ||||||||||||||||||||||||| |||| || ||||| || |||||||| ||| | | ||| ||||| | ||||||| ||||  |||||||    
T  34454503 tccctgcaaatataggtcatttgaattttcgtctttgaagttactaatccttccaatctacccctgcaaatattaatcatttgacttttgatc 34454595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 47739035 - 47738979
Alignment:
Q  131 ctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||||||||||| ||||||| ||||| | |||||||||| ||||||| |||||||||    
T  47739035 ctaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 47738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 12929638 - 12929519
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||| ||||||||||| || | ||| |||| |  |||||||| ||| | ||||| ||||| | ||||||| |    
T  12929638 ggcttaaatatgtctttcgtccctgcaaatattggtcatttgaatttccgtccctgaagtgactaatccttccaatctgcccgtgcaaatattaatcatt 12929539  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  12929538 tgacttttggtcctaattac 12929519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 37563373 - 37563472
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||||||||||||||| |||||||| |||| ||| |||| || |||||||| | | | ||||| ||||| | ||||||| ||||  |||| |||||||||    
T  37563373 tccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 37563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 45586584 - 45586631
Alignment:
Q  89 ccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||| |||| |||||||| || ||||||    
T  45586584 ccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 45586631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 20947371 - 20947317
Alignment:
Q  82 atttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||| ||||| ||||||||||||||||||| |||| |||||||| || ||||||    
T  20947371 atttcgtcccttcaaatataggtcatttgaattttcgtccttgaagttactaatc 20947317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 43938100 - 43938154
Alignment:
Q  82 atttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  43938100 atttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 43938154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 34454850 - 34454745
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||||||||||||||||||| ||||||||| |||| ||| |||| || ||||| ||  || | ||||| ||||| | ||||||| ||||  |||| | ||    
T  34454850 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaattctttcaatctgcccctgcaaatattaatcatttgacttttggttct 34454751  T
Q  183 aattac 188  Q
    ||||||    
T  34454750 aattac 34454745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 37563561 - 37563614
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||| |||||||| |||| ||| |||| || ||||||    
T  37563561 tttcatccctgcaaatatagggcatttgaattttcgtccctgaagttactaatc 37563614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 38644761 - 38644676
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttg 153  Q
    ||||| ||||||||||||||| | ||||| ||||||||||||||  ||| |||| | | |||  ||||||| |||||||| |||||    
T  38644761 tggcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttg 38644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 47558030 - 47558111
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||| ||  || ||||||  ||||||  |||||||| |||  || ||||||||||||||||||||    
T  47558030 ggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgccc 47558111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 15827913 - 15827981
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || ||||||    
T  15827913 tggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 15827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 47733082 - 47733138
Alignment:
Q  131 ctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||||||||||| ||| ||| ||||| | |||||||||| ||||||| |||||||||    
T  47733082 ctaatcctcccaatttacccctgcaaatattaatcacttaaaatttggtcctaatta 47733138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 13336938 - 13336820
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  || |||||||||||||||||    
T  13336938 ggcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccattctttccctgcaattgttaatcact 13336839  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||||||| |||| ||||    
T  13336838 tgaaatttggtccttatta 13336820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 9254406 - 9254522
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||  ||| |  || |||||||||||||||||    
T  9254406 ggctaaaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctcttattatttccctgcaattgttaatcact 9254505  T
Q  169 tgaaatttgatcctaat 185  Q
    ||||||||| |||||||    
T  9254506 tgaaatttggtcctaat 9254522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 22882427 - 22882319
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |  || |||||||||||||||||    
T  22882427 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcact 22882328  T
Q  169 tgaaatttg 177  Q
    | |||||||    
T  22882327 tcaaatttg 22882319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 22934091 - 22933983
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |  || |||||||||||||||||    
T  22934091 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcact 22933992  T
Q  169 tgaaatttg 177  Q
    | |||||||    
T  22933991 tcaaatttg 22933983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 22881166 - 22881286
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||  || | || |||||||||||||| |   | | ||||||||||||||    
T  22881166 tggctaaaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcac 22881265  T
Q  168 ttgaaatttgatcctaattac 188  Q
    |||||||||| ||||||||||    
T  22881266 ttgaaatttggtcctaattac 22881286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 22932830 - 22932950
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||  || | || |||||||||||||| |   | | ||||||||||||||    
T  22932830 tggctaaaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcac 22932929  T
Q  168 ttgaaatttgatcctaattac 188  Q
    |||||||||| ||||||||||    
T  22932930 ttgaaatttggtcctaattac 22932950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 53477180 - 53477064
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||||||||||| |||||| ||||||||||||||  |||||||  ||||||| |||||||||||||||||||| ||||| | ||||||| |    
T  53477180 ggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 53477081  T
Q  169 tgaaatttgatcctaat 185  Q
    ||||||||| |||||||    
T  53477080 tgaaatttgttcctaat 53477064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 54591679 - 54591591
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||  |||||||| ||||||| |||| ||||||||||||||| |||||    
T  54591679 tggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaa 54591591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 54590148 - 54590261
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||| ||||| || ||||||||||  | ||| | ||||||| |||||     
T  54590148 aaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcatttgaat 54590247  T
Q  174 tttgatcctaatta 187  Q
    |||  |||||||||    
T  54590248 tttcgtcctaatta 54590261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 38982693 - 38982592
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| |||||||||||||| |||||| | |||||  |||||||| ||| ||| |||||||||||||||||||| || ||||  |||||| ||||    
T  38982693 taaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttga 38982594  T
Q  172 aa 173  Q
    ||    
T  38982593 aa 38982592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 23455789 - 23455709
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||| |||||||||||||||||||| || ||||||||||||||  |||||| | ||| ||| |||||||||||||||||||    
T  23455789 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgcc 23455709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 13232732 - 13232671
Alignment:
Q  126 acttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||||||  ||||||||    
T  13232732 acttgctaatcctaccattttttccttgcaattgttaatcacttgaaatttggccctaatta 13232671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 23454954 - 23455035
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||| ||| ||| |||||| |||||||||||||    
T  23454954 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgccc 23455035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 56556582 - 56556686
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  56556582 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 56556681  T
Q  169 tgaaa 173  Q
    |||||    
T  56556682 tgaaa 56556686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 35731031 - 35730941
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||||| || | |||||| | ||||||| ||||||    
T  35731031 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttgaaa 35730941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 38813553 - 38813635
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    ||||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| |||||||||||    
T  38813553 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 38813635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 22249940 - 22249993
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  22249940 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 52815663 - 52815767
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  ||| |||| ||||||| ||||||||  |||||||||| || ||||  ||||||||    
T  52815663 ggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatcact 52815762  T
Q  169 tgaaa 173  Q
    |||||    
T  52815763 tgaaa 52815767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 50246228 - 50246173
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||||    
T  50246228 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 50246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 56557420 - 56557321
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||| ||||||||||  || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| ||||||    
T  56557420 aaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 56557321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 13872069 - 13872187
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||| ||||||| |||| ||| |||| ||  ||||||| ||| | ||||||||||| |  |||||| |    
T  13872069 ggcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcatt 13872168  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  13872169 tgacttttggtcctaatta 13872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 22249733 - 22249851
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||| ||||||||| |||| ||| |||| || ||||||||  || | ||||| ||||| | ||||||| |    
T  22249733 ggcttaaatatgtttttcgtccctgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 22249832  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  22249833 tgacttttggtcctaatta 22249851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 53559771 - 53559653
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||| | ||| | ||||| ||||| | ||||||| |    
T  53559771 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcatt 53559672  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  53559671 tgacttttggtcctaatta 53559653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 8286946 - 8287051
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||| | |||||||| |||| ||  |||| ||  ||||||| |||||||||| |||||| | ||||||| ||||||  || ||||    
T  8286946 tttcgtccctgcaaatataagccatttgaattttcgtctctgaagttaataatccttccattttgccattgcaaatattaatcatttgaaaaatggtcct 8287045  T
Q  183 aattac 188  Q
    ||||||    
T  8287046 aattac 8287051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 12691583 - 12691530
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  12691583 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 12691530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 12691784 - 12691671
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||| ||||||||||||||||||||||||| |||  ||| |||| || |||||||| ||| |  |||| ||||| | ||||||| ||||      
T  12691784 aaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttgact 12691685  T
Q  174 tttgatcctaatta 187  Q
    |||| |||||||||    
T  12691684 tttggtcctaatta 12691671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 13872276 - 13872329
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||| || ||||||    
T  13872276 tttcatccctgcaaatatatgtcatttgaatttttatccttgaagttactaatc 13872329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 47862329 - 47862276
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  47862329 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 47862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 53559564 - 53559511
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  53559564 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53559511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 54961445 - 54961550
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||  |||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  ||||||| |    
T  54961445 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttgatcat 54961544  T
Q  183 aattac 188  Q
    ||||||    
T  54961545 aattac 54961550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 38814427 - 38814323
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||| || || | |||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  38814427 ggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 38814328  T
Q  169 tgaaa 173  Q
    |||||    
T  38814327 tgaaa 38814323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 52816523 - 52816419
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || |||||| | |||||  |||||||  ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  52816523 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatt 52816424  T
Q  169 tgaaa 173  Q
    |||||    
T  52816423 tgaaa 52816419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 22250117 - 22249998
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || ||||| || ||| | ||||| ||||| | ||||||| |    
T  22250117 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatt 22250018  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||  ||||||||||    
T  22250017 tgacttttagtcctaattac 22249998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 33294330 - 33294287
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||  |||||||||||||||||||||||||||||| ||||    
T  33294330 aaatatgtctttcatccctgcaaatataggtcatttgaattttc 33294287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 37677862 - 37677917
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || ||||||||    
T  37677862 tttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 37677917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 55013188 - 55013070
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||| || || ||||||  ||||||  ||||||||| || ||| |||||||||||| ||||||| || ||||  |||||| |    
T  55013188 ggcttaaatatgcttttcatccatgtaattataggctatttgatttttcatcct-gagcttactaatcctcccagtttgcccctgtaattactaatcatt 55013090  T
Q  169 tgaaatttgatcctaattac 188  Q
    ||||| ||  ||||||||||    
T  55013089 tgaaaattcgtcctaattac 55013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 33294527 - 33294409
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||  ||||||| |||| ||| |||| || |||||||| ||  | ||||| ||||| | ||||||| |    
T  33294527 ggcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcatt 33294428  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  33294427 tgatttttggtcctaatta 33294409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 20086644 - 20086697
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||| || ||||||    
T  20086644 tttcatccctgcaaatataggtcctttgaattttcgtccctgaagttactaatc 20086697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 27813068 - 27813153
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||||||||| |||||||||| ||| |||| |||| || || ||||| |||||||| | |||||| |  |||||| ||||||    
T  27813068 tccctgcaaatataagtcatttgaatttttatccatgaagttactgatccttccattttgtcattgcaaatactaatcatttgaaa 27813153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 32846385 - 32846466
Alignment:
Q  92 tgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||||||| |||||||| |||| | | |||| ||  ||||||| |||||||||| |||||| | ||||||| ||||||    
T  32846385 tgcaaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatttgaaa 32846466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 34238647 - 34238594
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||| ||||||||||||| |||| ||| |||| || ||||||    
T  34238647 tttcatccctgcaaatttaggtcatttgaattttcgtccctgaagttactaatc 34238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 35730868 - 35730921
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||| || ||||||    
T  35730868 tttcgtccatgcaaatataggtcatttgaattttcgtccttgaagttactaatc 35730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 37678055 - 37678108
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  37678055 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 37678108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 47862166 - 47862239
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    ||||||||||||||||||| |||||||||| |||| ||  |||| || |||||||| ||| | ||||| |||||    
T  47862166 tttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaa 47862239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 47980862 - 47980809
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||| |||||||||||| |||| ||| |||| || ||||||    
T  47980862 tttcatccctgcaaatacaggtcatttgaattttcgtccatgaagttactaatc 47980809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 50245871 - 50245924
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| |||||| |||||||||||||||||| |||||||| |||| || ||||||    
T  50245871 tttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatc 50245924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 19916670 - 19916774
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||||||||| || ||||  || |||| || |||||||| ||| | ||||  ||||| | ||||||| ||||  |||| ||||    
T  19916670 tttcgtccctgcaaatataggtcatttaaattttcgcccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcct 19916769  T
Q  183 aatta 187  Q
    |||||    
T  19916770 aatta 19916774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 20086463 - 20086539
Alignment:
Q  95 aaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||    
T  20086463 aaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20086539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 28560160 - 28560200
Alignment:
Q  5 caatcagaacatcgatgcagatttttcttttaataataacc 45  Q
    |||||||||||| | ||| ||||||||||||||||||||||    
T  28560160 caatcagaacattgttgcggatttttcttttaataataacc 28560200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 54961810 - 54961746
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    |||||||  |||| ||||||||||||||||||||||||| |||  ||| |||| || ||||||||    
T  54961810 aaatatgtctttcgtccctgcaaatataggtcatttgaattttagtccctgaagttactaatcct 54961746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 52563651 - 52563771
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||  || |||||||||||||||||||  ||||| | |||||||||    
T  52563651 ggctaaaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgccactgcaaatattaatcact 52563750  T
Q  169 tgaaatttgatcctaattacg 189  Q
    |||  |||| |||||||||||    
T  52563751 tgagttttggtcctaattacg 52563771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 6344258 - 6344373
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||||||||||||||| || ||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | |||| || ||||    
T  6344258 taaaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacatttga 6344357  T
Q  172 aatttgatcctaatta 187  Q
    |||||| || ||||||    
T  6344358 aatttggtcataatta 6344373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 32238699 - 32238779
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||    
T  32238699 ggctaaaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcc 32238779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 6345737 - 6345618
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||| | |||| || |    
T  6345737 ggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatt 6345638  T
Q  169 tgaaatttgatcctaattac 188  Q
    | ||||||  ||||||||||    
T  6345637 taaaatttagtcctaattac 6345618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 36381519 - 36381414
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||| ||| |  || | ||||||||||||||||||    
T  36381519 taaaatatgtatttcatccctgcaaatataggctatttgaaattttatccttgaacttactaatcctcctattctttccctacaattgttaatcacttga 36381420  T
Q  172 aatttg 177  Q
    ||||||    
T  36381419 aatttg 36381414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 33347786 - 33347681
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| || |||||||| ||| | ||||||||||| | ||||||| ||||  |||| ||||    
T  33347786 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcct 33347687  T
Q  183 aattac 188  Q
    ||||||    
T  33347686 aattac 33347681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 51935300 - 51935181
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| |||||||| || || |||| |||||||||  |||||||| ||| ||| |||||||||||||||||||| |||||||  ||||||     
T  51935300 tggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctgcaattactaatcat 51935201  T
Q  168 ttgaaatttgatcctaatta 187  Q
    |||||| ||  |||||||||    
T  51935200 ttgaaaattcgtcctaatta 51935181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 2953849 - 2953729
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | |||||||     
T  2953849 tggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 2953750  T
Q  168 ttgaaatttgatcctaattac 188  Q
    ||||  |||| ||||||||||    
T  2953749 ttgatttttggtcctaattac 2953729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 32619387 - 32619503
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| ||||||||||| || ||| || |||||||  |||||||| ||| ||| |||||||||||||||||||| || ||||  |||||| ||||    
T  32619387 taaaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttga 32619486  T
Q  172 aatttgatcctaattac 188  Q
    || ||  ||||||||||    
T  32619487 aaattcgtcctaattac 32619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 25064938 - 25065008
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatt 144  Q
    ||||||||||||||||||||||| ||||||| ||||||  |||||||| ||| ||| ||||||||||||||    
T  25064938 aaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccatt 25065008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 52565051 - 52564933
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||||| ||| | |  || ||||| || ||||||||||  | ||| | |||||||||    
T  52565051 ggctaaaatatgcatgtcatccctgcaaatatagggcgtttgaaatttcttccctaagattactaattcttccattttgccactacaaatattaatcact 52564952  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  52564951 tgagttttggtcctaatta 52564933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 46282070 - 46282175
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  ||||||||||| || |||||||| |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  ||||||     
T  46282070 tggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 46282169  T
Q  168 ttgaaa 173  Q
    ||||||    
T  46282170 ttgaaa 46282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 46850028 - 46849923
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || || ||||| ||| ||||||| ||||| | ||||||| ||||  |||| ||||    
T  46850028 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 46849929  T
Q  183 aattac 188  Q
    ||||||    
T  46849928 aattac 46849923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 49002881 - 49002994
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||      
T  49002881 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttgact 49002980  T
Q  174 tttgatcctaatta 187  Q
    |||| |||||||||    
T  49002981 tttggtcctaatta 49002994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 10019729 - 10019653
Alignment:
Q  97 atataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||||||||||| |||||||| |||| || |||||||| |||||||||| |||||| | ||||||| ||||||    
T  10019729 atataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaa 10019653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 13295135 - 13295219
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttg 153  Q
    |||| |||||||||||||| ||||| || ||||||||||||||  ||||| || ||| ||| |||||||| ||||||||||||||    
T  13295135 ggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttg 13295219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 19755775 - 19755671
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| ||| |||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| ||||    
T  19755775 tttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 19755676  T
Q  183 aatta 187  Q
    |||||    
T  19755675 aatta 19755671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 46282889 - 46282789
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaa 172  Q
    ||||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |||||    
T  46282889 aaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaa 46282790  T
Q  173 a 173  Q
    |    
T  46282789 a 46282789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 2828193 - 2828296
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||| ||||| ||||| ||||||||  |||||||| | ||||| |||||||| | ||||||||  ||||| | ||||||| |    
T  2828193 ggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatt 2828292  T
Q  169 tgaa 172  Q
    ||||    
T  2828293 tgaa 2828296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 2829641 - 2829536
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaattt-------catccttgaacttgctaatcctcccattttgcccttgcaattgttaatca 166  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||       ||||||||| ||| |||||||||||||||| ||| ||||| | |||||||    
T  2829641 aaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatattaatca 2829542  T
Q  167 cttgaa 172  Q
     |||||    
T  2829541 tttgaa 2829536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 1047588 - 1047470
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| |||||||||||||||||| |||| ||  |||| || |||||||| ||| | ||||| ||||| | ||||||| |    
T  1047588 ggcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 1047489  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  1047488 tgacttttggtcctaatta 1047470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 36380189 - 36380300
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcat-ccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaa 172  Q
    ||||||||||||||||||||||||||||||  |||||||||||| | || | ||||| |||||    ||||| |  || ||||||||||||| |||||||    
T  36380189 aaatatgcatttcatccctgcaaatataggcaatttgaaatttcttccccttaacttactaat----ccattgtttccctgcaattgttaataacttgaa 36380284  T
Q  173 atttgatcctaattac 188  Q
    ||||  ||||||||||    
T  36380285 atttagtcctaattac 36380300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 46545097 - 46545011
Alignment:
Q  87 atccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||||| |||||||||||||||||| |||| ||| |||| || |||||||| ||||||||||  ||||| | ||||||| ||||||    
T  46545097 atccctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaa 46545011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 739233 - 739338
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||  |||||||| |||| |||||||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| ||||    
T  739233 tttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcct 739332  T
Q  183 aattac 188  Q
    ||||||    
T  739333 aattac 739338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 24701639 - 24701534
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    ||||||||||||||||||| | |||||||| |||| ||| |||| || |||||||| |||||||||| || ||| | |||| || ||||||  || ||||    
T  24701639 tttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaaccatttgaaaaatggtcct 24701540  T
Q  183 aattac 188  Q
    ||||||    
T  24701539 aattac 24701534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 28534896 - 28534820
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    |||| ||||||||||||| | | || ||||||||| ||||||||||||||||| ||||||| |||||||| |||||||    
T  28534896 ggcttaaatatgcatttcgttc-tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccatttt 28534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 49003245 - 49003140
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||  ||||| | ||||||| ||||  |||| ||||    
T  49003245 tttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcatttgatttttggtcct 49003146  T
Q  183 aattac 188  Q
    ||||||    
T  49003145 aattac 49003140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 5183871 - 5183771
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||||||||||||||| |||||||| |||| ||| |||| || | |||||| ||| ||||||| ||||| | ||||||| ||||  |||| |||||||||    
T  5183871 tccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 5183772  T
Q  188 c 188  Q
    |    
T  5183771 c 5183771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 29980999 - 29980903
Alignment:
Q  92 tgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    ||||||||||||||||||||| |||| |||  ||| || |||||||| ||| ||||||| ||||| | ||||||| ||||  |||| ||||||||||    
T  29980999 tgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatttgatttttggtcctaattac 29980903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 37152552 - 37152656
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||| ||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| |  |||||| ||||  |||||||||    
T  37152552 tttcgtccctacaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttgacttttgatcct 37152651  T
Q  183 aatta 187  Q
    |||||    
T  37152652 aatta 37152656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 49093041 - 49093145
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||| |||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  49093041 ggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatt 49093140  T
Q  169 tgaaa 173  Q
    |||||    
T  49093141 tgaaa 49093145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 50063044 - 50062968
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    ||||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||    
T  50063044 aaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcc 50062968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 29043140 - 29043021
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| || ||||||||||||| |||||||| |||| ||| |||| || ||||||||  || | ||||| ||||| | |||||||     
T  29043140 tggcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcat 29043041  T
Q  168 ttgaaatttgatcctaatta 187  Q
    ||||  ||||||||||||||    
T  29043040 ttgacttttgatcctaatta 29043021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 46364939 - 46364840
Alignment:
Q  89 ccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    ||||||||||||| || ||||||| |||| |||||||| || ||||||||  || | ||||| ||||| | ||||||| ||||  |||||||||||||||    
T  46364939 ccctgcaaatataagttatttgaattttcgtccttgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttttgatcctaattac 46364840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 5926524 - 5926606
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| |||||    
T  5926524 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaa 5926606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 32622453 - 32622375
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||||||||  ||||||||||| || ||| || |||||||  |||||||| ||| ||| ||||||||||||||||||||    
T  32622453 taaaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgccc 32622375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 6056553 - 6056500
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  6056553 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 6056500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 12577219 - 12577272
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  12577219 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 12577272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 12577382 - 12577277
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||| ||||||| || |||| |||||||| || ||||||||  || | ||||| ||||| | ||||||| ||||  |||| ||||    
T  12577382 tttcgtccctgcaaatataagtcatttaaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcct 12577283  T
Q  183 aattac 188  Q
    ||||||    
T  12577282 aattac 12577277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 29042932 - 29042879
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||| ||||||||||||||||||||| |||||||| |||| || ||||||    
T  29042932 tttcatccttgcaaatataggtcatttgaattttcatccctgaagttactaatc 29042879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 46364782 - 46364835
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  46364782 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 46364835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 10019565 - 10019633
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||| ||||| | ||||| |||||||||||||| |||||||||| |||| ||| |||| |||||||||    
T  10019565 tggcttaaataggtatttcgtccctgcaaatataagtcatttgaattttcgtccctgaagttgctaatc 10019633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 33030353 - 33030453
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    ||||||||||||||||||||||||| |||| ||| |||| || ||||| || ||| | ||||  ||||| | | ||||| ||||||  ||||||||||||    
T  33030353 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaattcttccaatctgccactgcaaatatgaatcatttgaaaaatgatcctaatta 33030452  T
Q  188 c 188  Q
    |    
T  33030453 c 33030453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 6056376 - 6056495
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| | || || || ||||| ||| | || || ||||| | ||||||| |    
T  6056376 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatt 6056475  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  6056476 tgacttttggtcctaattac 6056495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 33347623 - 33347666
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaa 126  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||    
T  33347623 tttcatccctgcaaatataggtcatttgaattttcgtccctgaa 33347666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 46364574 - 46364641
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  46364574 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 46364641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 739602 - 739484
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| || |||||||||||||||||||||| |||| | | |||| || ||||||||  || | || || ||||| | ||||||| |    
T  739602 ggcttaaatatgattttcgtctctgcaaatataggtcatttgaattttcgtacatgaagttactaatcctttcaatctgtccctgcaaatattaatcatt 739503  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  ||||||||||||||    
T  739502 tgacttttgatcctaatta 739484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 1040476 - 1040422
Alignment:
Q  82 atttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  1040476 atttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1040422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 1047382 - 1047328
Alignment:
Q  82 atttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  1047382 atttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1047328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 26953308 - 26953342
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||||||||||||||||||||||||| ||||    
T  26953308 tttcatccctgcaaatataggtcatttgaattttc 26953342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 29980845 - 29980879
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||||||||||||||||||||||||| ||||    
T  29980845 tttcatccctgcaaatataggtcatttgaattttc 29980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 33347416 - 33347534
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||| |||||||||| |||| ||| |||| || ||||| || ||| | ||||| | ||| | ||||||| |    
T  33347416 ggcttaaatatgtctttcgtccctgcaaatataagtcatttgaactttcgtccctgaagttactaattcttccaatctgcccctacaaatattaatcatt 33347515  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  33347516 tgacttttggtcctaatta 33347534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 5183527 - 5183624
Alignment:
Q  90 cctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||| |||||||||||||||||| |||| ||| | || || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| |||||||||    
T  5183527 cctgaaaatataggtcatttgaattttcgtccataaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 5183624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 5183713 - 5183766
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  5183713 tttcatccctacaaatataggtcatttgaattttcgtccatgaagttactaatc 5183766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 19755612 - 19755665
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  19755612 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 19755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 49003082 - 49003111
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaa 112  Q
    ||||||||||||||||||||||||||||||    
T  49003082 tttcatccctgcaaatataggtcatttgaa 49003111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 52454947 - 52455000
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatcc 121  Q
    ||||| ||||| | ||||| |||||||||| |||||||||||||| ||||||||    
T  52454947 tggcttaaataggtatttcgtccctgcaaaaataggtcatttgaattttcatcc 52455000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 13295680 - 13295608
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccc 141  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||  ||| ||| |||| ||||||    
T  13295680 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 25066053 - 25065981
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    |||||||||||||||||||  || |||| | |||||||  |||||||| ||| ||| |||||||| |||||||    
T  25066053 aaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccatttt 25065981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 19620886 - 19620777
Alignment:
Q  76 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatt 175  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||| | ||||||| ||||| ||    
T  19620886 atatgcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaattt 19620787  T
Q  176 tgatcctaat 185  Q
    | ||||||||    
T  19620786 tcatcctaat 19620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 43236504 - 43236577
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccca 142  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  43236504 ggctaaaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 33882970 - 33882854
Alignment:
Q  71 ctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttg 170  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||   |||  || |||||||||||||||||||   |||| | |||||||||||    
T  33882970 ctaaaatatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccattttgcc--agcaaatattaatcacttg 33882873  T
Q  171 aaatttgatcctaattacg 189  Q
    || |||| |||||||||||    
T  33882872 aattttggtcctaattacg 33882854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 7983910 - 7983837
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccca 142  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  7983910 ggctaaaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 20101770 - 20101888
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| |||||||  |||||||| ||| ||| |||||||||||||||||||| |||||||  |||||| |    
T  20101770 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattaataatcatt 20101869  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||| ||  |||||||||    
T  20101870 tgaaaattcgtcctaatta 20101888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 33881578 - 33881695
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| | |  ||  |||| |||||||||||||  ||||| | |||||||||| |    
T  33881578 taaaatatgcatttcatccctgtaaatatagggcatttgaaatttcatccctaaggttattaattctcccattttgccactgcaaatattaatcacttca 33881677  T
Q  172 aatttgatcctaattacg 189  Q
      |||| |||||||||||    
T  33881678 gttttggtcctaattacg 33881695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 43237820 - 43237747
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccca 142  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||    
T  43237820 ggctaaaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctccca 43237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 23206508 - 23206428
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    ||||||||||  |||||||||  |||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||    
T  23206508 ggctaaaatagacatttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgcc 23206428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 23678112 - 23678032
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    ||||||||||  |||||||||  |||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||    
T  23678112 ggctaaaatagacatttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgcc 23678032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 25624534 - 25624456
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccatttt 146  Q
    ||||| |||||||||||||||||||| || ||||||||||||||  |||||||| ||| ||| ||||||||||||||||    
T  25624534 tggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttt 25624456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 24387351 - 24387470
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||| |||||| ||||| |  |||||||| ||| ||| ||||||||||||||||| || || ||   ||||||| |    
T  24387351 ggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatt 24387450  T
Q  169 tgaaatttgatcctaattac 188  Q
    ||||| ||  ||||||||||    
T  24387451 tgaaaattcgtcctaattac 24387470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 855484 - 855379
Alignment:
Q  81 catttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatc 180  Q
    ||||||||||||||||||| || || ||||||||||||||| |||| || |||||| | |||||||||  |||||| | ||||| | || ||||||||||    
T  855484 catttcatccctgcaaatagagttc-tttgaaatttcatccatgaagttactaatctttccattttgctattgcaaatattaattattttaaatttgatc 855386  T
Q  181 ctaatta 187  Q
    |||||||    
T  855385 ctaatta 855379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 20103244 - 20103126
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||| ||||||| || |||||| |||| ||  |||||||| ||| ||| |||||||||||||||||||| |||||||  |||||| |    
T  20103244 ggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccatgcaattactaatcatt 20103145  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||| ||  |||||||||    
T  20103144 tgaaaattcgtcctaatta 20103126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 25623287 - 25623369
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    ||||| |||||||||||||||||||  || |||||| |||||||  |||||||| ||| ||| ||||||||||||||||||||    
T  25623287 tggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 25623369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 7981048 - 7981120
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctccca 142  Q
    |||||||| ||||||||  ||||||||| ||||||||||||||||||||||||  |||||| ||||||||||||    
T  7981048 ggctaaaa-atgcattttctccctgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 9694112 - 9694007
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||| ||||||||||||||||||||| |||| ||| |||| || |||||||| |||||||| | |||||| | ||||||| ||||||  || ||||    
T  9694112 tttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaaaatggtcct 9694013  T
Q  183 aattac 188  Q
    ||||||    
T  9694012 aattac 9694007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 28599441 - 28599546
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||| ||||||||||| ||||||||| |||| ||| |||| || |||||||| |||||||||| |||||| | ||||||| ||||||  || ||||    
T  28599441 tttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcct 28599540  T
Q  183 aattac 188  Q
    ||||||    
T  28599541 aattac 28599546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 20982524 - 20982628
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  20982524 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20982623  T
Q  169 tgaaa 173  Q
    |||||    
T  20982624 tgaaa 20982628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 29957817 - 29957921
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  29957817 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 29957916  T
Q  169 tgaaa 173  Q
    |||||    
T  29957917 tgaaa 29957921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 1149937 - 1150056
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||| | ||||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| |  |||| ||||| | ||||||| |    
T  1149937 ggcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatt 1150036  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  1150037 tgacttttggtcctaattac 1150056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 16366963 - 16367081
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||| |||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| |    
T  16366963 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 16367062  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  16367063 tgacttttggtcctaatta 16367081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 16367333 - 16367228
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| ||||    
T  16367333 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcct 16367234  T
Q  183 aattac 188  Q
    ||||||    
T  16367233 aattac 16367228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 20911144 - 20911249
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  |||| || |    
T  20911144 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcat 20911243  T
Q  183 aattac 188  Q
    ||||||    
T  20911244 aattac 20911249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 20983362 - 20983257
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| ||||||||||| || |||||  | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  ||||||     
T  20983362 tggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 20983263  T
Q  168 ttgaaa 173  Q
    ||||||    
T  20983262 ttgaaa 20983257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 24388356 - 24388276
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||| ||||||||||||||||||||||| |||| |  ||||||  |||||||| ||| ||| |||||||| ||||||||||    
T  24388356 ggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgcc 24388276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 23183595 - 23183679
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggt----catttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||||||||| ||||||||||||||||||||||  |    |||||||||||||||||  ||| || |||||||||| ||||||||    
T  23183595 ggctaaaataggcatttcatccctgcaaatatatatagagcatttgaaatttcatccaagaagttactaatcctcctattttgcc 23183679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 23594852 - 23594936
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggt----catttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||||||||| ||||||||||||||||||||||  |    |||||||||||||||||  ||| || |||||||||| ||||||||    
T  23594852 ggctaaaataggcatttcatccctgcaaatatatatagagcatttgaaatttcatccaagaagttactaatcctcctattttgcc 23594936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 32519155 - 32519274
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||| | ||||| | ||||||| |    
T  32519155 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatt 32519254  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| | ||||||||    
T  32519255 tgacttttggttctaattac 32519274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 1150321 - 1150203
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| | ||||||||||||||||||||||| |||| ||| |||| || ||||||||  || | ||||| ||||| | ||||||| |    
T  1150321 ggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatcatt 1150222  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  1150221 tgacttttggtcctaatta 1150203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 10446831 - 10446929
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatca 166  Q
    ||||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | |||||||    
T  10446831 tggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 10446929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 43681856 - 43681958
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||| |||||||||| |||| ||| | || || |||||| | |||||||||| |||||| | ||||||| |    
T  43681856 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccataaagttactaatcattccattttgccattgcaaatattaatcatt 43681955  T
Q  169 tga 171  Q
    |||    
T  43681956 tga 43681958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 8089629 - 8089576
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||| |||||| |||| |||||||| || ||||||    
T  8089629 tttcatccctgcaaatataggtcgtttgaattttcgtccttgaagttactaatc 8089576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 13646137 - 13646198
Alignment:
Q  126 acttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||| |||||||||||| ||||||| ||||| | |||||||||| ||||||| |||||||||    
T  13646137 acttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 13646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 13652136 - 13652075
Alignment:
Q  126 acttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    |||| |||||||||||| ||||||| ||||| | |||||||||| ||||||| |||||||||    
T  13652136 acttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 13652075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 32519332 - 32519279
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  32519332 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 32519279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 45663701 - 45663768
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| | |||||| || ||||||    
T  45663701 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatc 45663768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 22731739 - 22731773
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||||||||||||||||||||||||| ||||    
T  22731739 tttcatccctgcaaatataggtcatttgaattttc 22731773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 29958648 - 29958566
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    ||||| |||||||  ||||||||||| || ||||||   |||||  |||||||| ||||||| |||||||| |||||||||||    
T  29958648 tggcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgccc 29958566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 32519539 - 32519421
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||| |||||||||| |||| | | |||| || ||||||||  || | ||||| ||||| | ||||||| |    
T  32519539 ggcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 32519440  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  32519439 tgacttttggtcctaatta 32519421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 37985111 - 37984993
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||||||||| | ||||| |||||||||||||| |||||||||  |||| ||  |||| || |||||||| ||| ||||||  |||||   ||||||| |    
T  37985111 ggctaaaataagtatttcgtccctgcaaatatatgtcatttgatttttcgtctctgaaattactaatccttccaatttgccactgcaaaatttaatcatt 37985012  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  ||||||| ||||||    
T  37985011 tgacttttgatcttaatta 37984993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 43682225 - 43682183
Alignment:
Q  81 catttcatccctgcaaatataggtcatttgaaatttcatcctt 123  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||    
T  43682225 catttcgtccctccaaatataggtcatttgaattttcatcctt 43682183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 1150114 - 1150061
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  1150114 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1150061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 8089474 - 8089571
Alignment:
Q  91 ctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    ||||||||||| |||||||||| |||| || ||||| || |||||||| ||| | ||||| ||||| | | ||||| ||||  |||| ||||||||||    
T  8089474 ctgcaaatatatgtcatttgaattttcgtctttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttgacttttggtcctaattac 8089571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9959032 - 9959085
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||||||||||||||||||||||||| ||| ||| ||||| || ||||||    
T  9959032 tttcgtccctgcaaatataggtcatttgaatttttatctttgaagttactaatc 9959085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 16367170 - 16367223
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  16367170 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 16367223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 17366640 - 17366745
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||||||| ||||||||||||||||||||| |||| ||| |||| ||  ||||||| ||| | ||||  ||||| | ||||||| || |||  || ||||    
T  17366640 tttcatccatgcaaatataggtcatttgaattttcttccctgaatttaataatccttccaatctgccactgcaaatattaatcatttaaaaaatggtcct 17366739  T
Q  183 aattac 188  Q
    ||||||    
T  17366740 aattac 17366745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 18476912 - 18477025
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||| || |||| ||||||||| ||||||||||||||| |||  ||| |||| || |||||||| ||| | ||||  |||||   ||||||| ||||      
T  18476912 aaataggcctttcgtccctgcaactataggtcatttgaatttttgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttgact 18477011  T
Q  174 tttgatcctaatta 187  Q
    ||||||||||||||    
T  18477012 tttgatcctaatta 18477025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 20911303 - 20911254
Alignment:
Q  87 atccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  20911303 atccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 20911254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 22309623 - 22309672
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttc 117  Q
    ||||| ||||| ||||||  ||||||||||||||||||||||||| ||||    
T  22309623 tggcttaaataggcattttgtccctgcaaatataggtcatttgaattttc 22309672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 41846599 - 41846652
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  41846599 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 41846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 22309801 - 22309749
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaat 135  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||    
T  22309801 tttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaat 22309749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 261001 - 261104
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| ||||||||||||||||||||||| ||||||||||||||  |||||||| |||| || |||||||||||||||||||| ||||| | ||||||| |    
T  261001 ggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcatt 261100  T
Q  169 tgaa 172  Q
    ||||    
T  261101 tgaa 261104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 262541 - 262425
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||||||||||||||| || ||||||||||||||  |||||||| ||||||| |||||||||||||||| ||| ||||| | ||||||| |    
T  262541 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcatt 262442  T
Q  169 tgaaatttgatcctaat 185  Q
    | || ||| ||||||||    
T  262441 taaattttcatcctaat 262425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 593 - 695
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||||||||||| |||||| ||||||||||||||  |||||||| ||||||| ||||||||| |||||||||| ||||| | ||||||| |    
T  593 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 692  T
Q  169 tga 171  Q
    |||    
T  693 tga 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 800 - 853
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  800 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 8427459 - 8427378
Alignment:
Q  75 aatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaa 156  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||| || |||| |||||||||||||||||||| |||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctgcaa 8427378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 17784485 - 17784367
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||||||  ||||| |||||||  |||||||| ||||||| |||||||||||||||||||| ||||| | ||||||| |    
T  17784485 ggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatt 17784386  T
Q  169 tgaaatttgatcctaatta 187  Q
    | ||| ||  |||||||||    
T  17784385 ttaaaattcgtcctaatta 17784367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 8427199 - 8427316
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||||||| ||||||||||||||||||||| |||| ||  | || || |||||||||||||||||||| ||||| | |||||||     
T  8427199 tggcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcag 8427298  T
Q  168 ttgaaatttgatcctaat 185  Q
    ||||| ||| ||||||||    
T  8427299 ttgaattttcatcctaat 8427316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 3299938 - 3299839
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||| |||||||| || |||||||| ||| | |||| |||||| | ||||||| ||||||    
T  3299938 aaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcatttgaaa 3299839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 33401226 - 33401123
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||||||||| |||||| | |||||  |||||||| ||||||| |||||||||||||||||||| || ||  |||||||| |    
T  33401226 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatt 33401127  T
Q  169 tgaa 172  Q
    ||||    
T  33401126 tgaa 33401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 31386813 - 31386918
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    ||||||||||| |||||||||  |||||||  ||| |||||||| ||||||||||| |||||||||  |||||| | ||||||| ||||||  |||||||    
T  31386813 tttcatccctgtaaatataggatatttgaatattcgtccttgaagttgctaatccttccattttgcaattgcaaatattaatcatttgaaaaatgatcct 31386912  T
Q  183 aattac 188  Q
    ||||||    
T  31386913 aattac 31386918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 5064335 - 5064453
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||| ||||||| |||||||||| |||| ||| |||| || |||||||||||| ||||||| ||||| | ||||||| |    
T  5064335 ggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatt 5064434  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  5064435 tgacttttggtcctaatta 5064453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 33399965 - 33400070
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  ||||||     
T  33399965 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 33400064  T
Q  168 ttgaaa 173  Q
    ||||||    
T  33400065 ttgaaa 33400070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 738082 - 737962
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| | ||| | |||||||     
T  738082 tggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcat 737983  T
Q  168 ttgaaatttgatcctaattac 188  Q
    ||||  |||| ||||||||||    
T  737982 ttgacttttggtcctaattac 737962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 13480208 - 13480327
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||| |||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| |    
T  13480208 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 13480307  T
Q  169 tgaaatttgatcctaattac 188  Q
    |||  |||| ||||||||||    
T  13480308 tgacttttggtcctaattac 13480327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 15819874 - 15819756
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | | ||||||||| |  |||||| |    
T  15819874 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcatt 15819775  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  15819774 tgacttttggtcctaatta 15819756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 20561125 - 20561187
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||  |||||||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  20561125 aaatatgtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 20561187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 22494245 - 22494147
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatt 186  Q
    ||||||||||||||||||||||||| |||| |||||||| || |||||||| ||| | ||||| ||||| | | ||||| ||||  |||| ||||||||    
T  22494245 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttgacttttggtcctaatt 22494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 4116799 - 4116903
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || |||||| | |||||  |||||||| ||| ||| |||||||||||||||||||| || ||  |||||||| |    
T  4116799 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4116898  T
Q  169 tgaaa 173  Q
    |||||    
T  4116899 tgaaa 4116903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 4117647 - 4117543
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || |||||| | |||||  |||||||| ||| ||| |||||||||||||||||||| || ||  |||||||| |    
T  4117647 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4117548  T
Q  169 tgaaa 173  Q
    |||||    
T  4117547 tgaaa 4117543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 14656480 - 14656584
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||||||||| ||||||   |||||  |||||||| ||| ||| |||||||||| ||||||||| || ||  |||||||| |    
T  14656480 ggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 14656579  T
Q  169 tgaaa 173  Q
    |||||    
T  14656580 tgaaa 14656584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 23292129 - 23292010
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||  |||| ||| ||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | |  || ||||| | |||||||     
T  23292129 tggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcat 23292030  T
Q  168 ttgaaatttgatcctaatta 187  Q
    ||||  ||||||||||||||    
T  23292029 ttgacttttgatcctaatta 23292010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 9607686 - 9607588
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcc 181  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| | | | ||||| ||||| | ||||||| ||||  ||||||||    
T  9607686 tttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttctaatatgcccctgcaaatattaatcatttgacttttgatcc 9607588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 30234976 - 30234874
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| |||||||||||||||||  |||||| |||||||| |||| || |||||||| ||| | ||||| ||||| | ||||||| |    
T  30234976 ggcttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 30234877  T
Q  169 tga 171  Q
    |||    
T  30234876 tga 30234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 23291921 - 23291868
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  23291921 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 23291868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 3299581 - 3299677
Alignment:
Q  91 ctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaatta 187  Q
    ||||||||||| |||||||||| |||| ||| |||| || |||||| | ||| |||||| |||||| | ||||||| || |  ||||||||||||||    
T  3299581 ctgcaaatataagtcatttgaattttcgtccatgaagttactaatcattccaatttgccattgcaaatattaatcatttcacttttgatcctaatta 3299677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 13480385 - 13480333
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaat 135  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || |||||    
T  13480385 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaat 13480333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 16707016 - 16706968
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  16707016 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 16706968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 19296439 - 19296487
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  19296439 tccctgcaaatataggtcatttgaattttcatccatgaagttactaatc 19296487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 1661525 - 1661426
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||| ||| || ||||  |||||| ||||||    
T  1661525 aaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttgaaa 1661426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 16704679 - 16704624
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    |||| |||||||||||||||| |||||||| |||| |||||||| || ||||||||    
T  16704679 tttcgtccctgcaaatataggccatttgaattttcgtccttgaagttactaatcct 16704624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 3299765 - 3299819
Alignment:
Q  82 atttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||| || ||||||    
T  3299765 atttcgtccctgcaaacataggtcatttgaattttcatccatgaagttactaatc 3299819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 5064714 - 5064600
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||| || ||||||||||||| |||||||| |||| ||| |||  || |||||||| ||| | ||||| ||||| | ||||||| ||||      
T  5064714 aaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttgact 5064615  T
Q  174 tttgatcctaattac 188  Q
    |||| ||||||||||    
T  5064614 tttggtcctaattac 5064600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 13480592 - 13480474
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||| || |||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| | ||| | ||||||| |    
T  13480592 ggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcatt 13480493  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  13480492 tgacttttggtcctaatta 13480474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 32337741 - 32337707
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||||||||||||||||||||||||||||| ||||    
T  32337741 tttcatccctgcaaatataggtcatttgaattttc 32337707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 737904 - 737957
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||||||||||||||||||||||||| |||||| | |||| || ||||||    
T  737904 tttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatc 737957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 7612562 - 7612667
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||  |||||||| |||| ||| |||| || ||||| ||  ||||||| | |||||| | ||||||| ||||||  || ||||    
T  7612562 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaattctttcattttgtcattgcaaatattaatcatttgaaaaatggtcct 7612661  T
Q  183 aattac 188  Q
    ||||||    
T  7612662 aattac 7612667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 21880571 - 21880624
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||| || ||||||    
T  21880571 tttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 21880624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 22494057 - 22494004
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||| ||||||| |||| ||| |||| || ||||||    
T  22494057 tttcatccctgcaaatataggttatttgaattttcgtccctgaagttactaatc 22494004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 31879472 - 31879576
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||| ||||||||||| |||| |||  ||| || |||||| | |||||||||| |||||| | ||||| | ||||||  || ||||    
T  31879472 tttcgtccctgcaaatat-ggtcatttgaattttcgtccccgaagttactaatctttccattttgccattgcaaatattaataatttgaaaaatggtcct 31879570  T
Q  183 aattac 188  Q
    ||||||    
T  31879571 aattac 31879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 32337578 - 32337683
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| |||||||||||||||  |||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||  ||||  |||    
T  32337578 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttgggcct 32337677  T
Q  183 aattac 188  Q
    ||||||    
T  32337678 aattac 32337683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 32337930 - 32337849
Alignment:
Q  90 cctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    ||||||||||||||||||||||| |||| ||| |||| || || ||||| ||| | ||||| ||||| | ||||||| ||||    
T  32337930 cctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcatttga 32337849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 5064542 - 5064594
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaat 135  Q
    |||||||||||||||||||| ||||||||| |||| ||| |||| || |||||    
T  5064542 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaat 5064594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 14657309 - 14657205
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||  || |||||| | |||||  ||| |||| ||| ||| |||||||| ||||||||||| || ||||  |||||| |    
T  14657309 ggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatt 14657210  T
Q  169 tgaaa 173  Q
    |||||    
T  14657209 tgaaa 14657205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 20560928 - 20560976
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttc 117  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||||    
T  20560928 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttc 20560976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 10867 - 10971
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||| |||  ||| || |||||||| |||||||||| |||||| | ||||||| ||||  |||||||||    
T  10867 tttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttgacttttgatcct 10966  T
Q  183 aatta 187  Q
    |||||    
T  10967 aatta 10971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 11227 - 11137
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||| |||||| |||||||||||||||||| |||| |||||||| ||  |||| || |||||||||| |||||| | ||||||| ||||||    
T  11227 tttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaaa 11137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 11064 - 11117
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  11064 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 11117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 22736790 - 22736671
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || ||||||||||||||  |||||||| ||| ||| |||||||||||||||||||| || ||||  |||||| |    
T  22736790 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatt 22736691  T
Q  169 tgaaatttgatcctaattac 188  Q
    ||||| ||  ||||||||||    
T  22736690 tgaaaattcgtcctaattac 22736671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 1741387 - 1741505
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||||||||| | ||||||| |    
T  1741387 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatt 1741486  T
Q  169 tgaaatttgatcctaatta 187  Q
    |||  |||| |||||||||    
T  1741487 tgacttttggtcctaatta 1741505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 32717205 - 32717124
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || ||||||||||||||  |||||||| | ||||| |||||||| |||||||||||    
T  32717205 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgccc 32717124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 44482050 - 44481934
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| ||||||||||| || ||| || |||||||  |||||||| ||| ||| |||||||||||||||||||| || ||||  |||||| ||||    
T  44482050 taaaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttga 44481951  T
Q  172 aatttgatcctaattac 188  Q
    || ||  ||||||||||    
T  44481950 aaattcgtcctaattac 44481934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 29193093 - 29193012
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||||| ||| ||| ||||||||||||||| ||||    
T  29193093 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgccc 29193012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 37249202 - 37249303
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| |||||||||||||| |||||| | |||||  |||||||| ||| |||  ||||||||||||||||||| || ||||  |||||| ||||    
T  37249202 taaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttga 37249301  T
Q  172 aa 173  Q
    ||    
T  37249302 aa 37249303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 45279385 - 45279280
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  ||||||     
T  45279385 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 45279286  T
Q  168 ttgaaa 173  Q
    ||||||    
T  45279285 ttgaaa 45279280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 55037048 - 55036935
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||  |||| ||||||||||||||||||||||||| |||| | |||||| || |||||||| ||| | ||||| ||||| | ||||||| ||||      
T  55037048 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcatttgatt 55036949  T
Q  174 tttgatcctaatta 187  Q
    |||| |||||||||    
T  55036948 tttggtcctaatta 55036935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 44476052 - 44476168
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||  ||||||||||| || ||| || |||||||  |||||||| ||||||| ||||||||||||||||||||  | ||||  |||||| ||||    
T  44476052 taaaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcatttga 44476151  T
Q  172 aatttgatcctaattac 188  Q
    || ||  ||||||||||    
T  44476152 aaattcgtcctaattac 44476168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 11026733 - 11026628
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| | |||||| ||||||||||| || ||||  ||||||     
T  11026733 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcat 11026634  T
Q  168 ttgaaa 173  Q
    ||||||    
T  11026633 ttgaaa 11026628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 21300340 - 21300393
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  21300340 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 37249894 - 37249794
Alignment:
Q  72 taaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||||| |||||||| ||||| |||||| | |||||  |||||||| ||| ||| |||||||||||||| |||||||| ||||  |||||| ||||    
T  37249894 taaaatatgcttttcatcc-tgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttga 37249796  T
Q  172 aa 173  Q
    ||    
T  37249795 aa 37249794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 40256888 - 40256993
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||| ||||||||||||| ||||||| |||| ||| |||| || |||||||| ||| | ||||||||||| | ||||||| ||||  |||| ||||    
T  40256888 tttcgtccatgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgacttttggtcct 40256987  T
Q  183 aattac 188  Q
    ||||||    
T  40256988 aattac 40256993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 53037041 - 53037146
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||| || |||||||| ||| | | ||| ||||| | ||| ||| |||| |||||||| |    
T  53037041 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatacccctgcaaatattagtcatttgacatttgatcat 53037140  T
Q  183 aattac 188  Q
    ||||||    
T  53037141 aattac 53037146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 1757404 - 1757300
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||  ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |    
T  1757404 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 1757305  T
Q  169 tgaaa 173  Q
    |||||    
T  1757304 tgaaa 1757300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 2944766 - 2944662
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||  ||||||||||| || ||||  |||||| |    
T  2944766 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatt 2944667  T
Q  169 tgaaa 173  Q
    |||||    
T  2944666 tgaaa 2944662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 45278548 - 45278648
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaa 172  Q
    ||||||||| ||||||||||| || |||||| | |||||  |||||||| |||| || |||||||| ||||||||||| || ||||  |||||| |||||    
T  45278548 aaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaa 45278647  T
Q  173 a 173  Q
    |    
T  45278648 a 45278648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 48188382 - 48188482
Alignment:
Q  73 aaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaa 172  Q
    ||||||||  ||||||||||| || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| |||||    
T  48188382 aaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaa 48188481  T
Q  173 a 173  Q
    |    
T  48188482 a 48188482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 55036683 - 55036787
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||||||||||||| |||||| | |||| || |||||||| ||| | ||||| ||||| | ||||||| || |  |||| ||||    
T  55036683 tttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaacctttggtcct 55036782  T
Q  183 aatta 187  Q
    |||||    
T  55036783 aatta 55036787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 10998252 - 10998155
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttga 171  Q
    |||||||  |||| || |||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||| ||||| | ||||||| ||||    
T  10998252 aaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 10998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 29192035 - 29192116
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    |||| |||||||||||||||||||| || |||||| |||||||  |||||| | ||| ||| |||||||| || ||||||||    
T  29192035 ggctgaaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgccc 29192116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 40257051 - 40256998
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| | | |||| |||||||||    
T  40257051 tttcatccctgcaaatataggtcatttgaattttcgttcctgaagttgctaatc 40256998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 55036846 - 55036793
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  55036846 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 55036793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 30654498 - 30654550
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaat 135  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||| || |||||    
T  30654498 tttcatccctgcaaatataagtcgtttgaaatttcgtccttgaagttactaat 30654550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 46670618 - 46670542
Alignment:
Q  90 cctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatca 166  Q
    |||| |||||||||||||||||| |||||||| |||| || ||||| || |||||||| | |||||| | |||||||    
T  46670618 cctgtaaatataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatca 46670542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 48189199 - 48189095
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| |||||||| || || |||||| | |||||  |||||||| ||| ||| |||||||| ||||||||||| || ||||  |||||| |    
T  48189199 ggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatcatt 48189100  T
Q  169 tgaaa 173  Q
    |||||    
T  48189099 tgaaa 48189095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 1756564 - 1756654
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    |||||||| || || |||||| | |||||  |||||||| ||||||| |||||||| ||||||||||| || ||||  |||||| ||||||    
T  1756564 tttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 1756654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 21255894 - 21255796
Alignment:
Q  90 cctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    ||||||||||||| ||||||||| |||| ||| | || || ||||| || |||||||||| ||| || | ||||||| ||||||  || ||||||||||    
T  21255894 cctgcaaatatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcatttgaaaaatggtcctaattac 21255796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 43105920 - 43105830
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaa 173  Q
    ||||||||||| || |||||| | |||||  |||||||| ||||||| ||||||||  |||||||||| || ||||  |||||| ||||||    
T  43105920 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaa 43105830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 46670267 - 46670317
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    ||||||||||||||||||||||||| || | |||||||| || ||||||||    
T  46670267 tccctgcaaatataggtcatttgaatttccgtccttgaatttactaatcct 46670317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 10749495 - 10749442
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||||||||||| || |||| ||| |||| || ||||||    
T  10749495 tttcatccctgcaaatataggtcatttaaattttcgtccctgaagttactaatc 10749442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 10998051 - 10997998
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||| |||||||||| |||| ||| |||| || ||||||    
T  10998051 tttcatccctgcaaatatatgtcatttgaattttcgtccatgaagttactaatc 10997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 11312942 - 11312995
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||| ||||||||||||||||||||| |||| ||| |||| || ||||||    
T  11312942 tttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 11312995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 21255738 - 21255791
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||||||||||| |||||||||| |||||| | |||| || ||||||    
T  21255738 tttcatccctgcaaatataagtcatttgaattttcattcctgaagttactaatc 21255791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 22129183 - 22129130
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||| || ||||||    
T  22129183 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 22129130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 53037204 - 53037151
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||| ||||||||||||||||||||| |||| ||| |||| || ||||||    
T  53037204 tttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53037151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 13608 - 13690
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||  |||||||| ||| ||| |||||||| |||||||||||    
T  13608 tggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgccc 13690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 14688 - 14612
Alignment:
Q  74 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgccc 150  Q
    ||||||||||||||| ||| ||| |||||| |||||||  |||||||| ||| ||| ||||||||||||||||||||    
T  14688 aaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 14612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 14477 - 14359
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||| ||||| || |||||| |||||||  |||||||| ||| ||| |||||||||||||||| ||| |||||||  |||||| |    
T  14477 ggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctgcaattactaatcatt 14378  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||| || ||||||||||    
T  14377 tgaaaattcatcctaatta 14359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 13134 - 13252
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcact 168  Q
    |||| |||||||| ||||||||||| ||||||||  |||||||  |||||||  |||  ||  ||||||||||||||||||| |||||||  |||||| |    
T  13134 ggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaattactaatcatt 13233  T
Q  169 tgaaatttgatcctaatta 187  Q
    ||||| ||  |||||||||    
T  13234 tgaaaattcgtcctaatta 13252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 73108 - 73228
Alignment:
Q  68 tggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcac 167  Q
    ||||| |||||||| ||||||||||| || ||| || |||||||  |||||||| ||| ||| |||||||||||||||||||| || ||||  ||||||     
T  73108 tggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcat 73207  T
Q  168 ttgaaatttgatcctaattac 188  Q
    |||||| ||  ||||||||||    
T  73208 ttgaaaatttgtcctaattac 73228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 10339 - 10444
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcct 182  Q
    |||| ||||||||||||||| ||||||||| |||| ||| |||| || |||||||| ||| ||||||| ||||| | ||||||| ||||  |||| ||||    
T  10339 tttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 10438  T
Q  183 aattac 188  Q
    ||||||    
T  10439 aattac 10444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 10839 - 10786
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  10839 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 10786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 11046 - 10979
Alignment:
Q  69 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatc 136  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| |||| ||| |||| || ||||||    
T  11046 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 10979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 14100 - 14143
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaa 126  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||    
T  14100 tttcatccctgcaaatataggtcatttgaattttcgtccatgaa 14143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 14249 - 14315
Alignment:
Q  83 tttcatccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcc 149  Q
    |||| |||||||||||||| |||||||||| |||| |||||||  || |||||||| ||| ||||||    
T  14249 tttcgtccctgcaaatataagtcatttgaattttcgtccttgaggttactaatccttccaatttgcc 14315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 14599 - 14549
Alignment:
Q  88 tccctgcaaatataggtcatttgaaatttcatccttgaacttgctaatcct 138  Q
    |||||| |||||||||||||||||| |||| |||||||| || ||||||||    
T  14599 tccctgtaaatataggtcatttgaattttcgtccttgaagttactaatcct 14549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 8459 - 8552
Alignment:
Q  95 aaatataggtcatttgaaatttcatccttgaacttgctaatcctcccattttgcccttgcaattgttaatcacttgaaatttgatcctaattac 188  Q
    |||||||||||||||||| |||| ||| |||| || |||||||| ||| | ||||  ||||| | ||||||| ||||||  || ||||||||||    
T  8459 aaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatggtcctaattac 8552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University