View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4553-Insertion-5 (Length: 550)
Name: NF4553-Insertion-5
Description: NF4553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4553-Insertion-5 |
 | |
|
| [»] chr6 (1 HSPs) |
| |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] chr3 (3 HSPs) |
| |
|
| [»] scaffold0135 (14 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 498; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 8 - 550
Target Start/End: Complemental strand, 22082739 - 22082193
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22082739 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt |
22082640 |
T |
|
| Q |
108 |
tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22082639 |
tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata |
22082540 |
T |
|
| Q |
208 |
tcattataagtatttcatgttatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacagt |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22082539 |
tcattataagtatttcatgttatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctaccccatattctaaatgattcaacacacagt |
22082440 |
T |
|
| Q |
308 |
tatagatgtaaatatttgaaagaaactctttataatataagtaaaatt----nnnnnnnntaaaaggatcttcaaattgagatggtaagcataaatataa |
403 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22082439 |
tatacatgtaaatatttgaaagaaactctttataatataagtaaaattaaaaaaataaaataaaaggatcttcaaattgagatggtaagcataaatataa |
22082340 |
T |
|
| Q |
404 |
gaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttat |
503 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22082339 |
gaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttat |
22082240 |
T |
|
| Q |
504 |
tttcaacattggaacaaaaatcaaacaaagaagaaaaacacactata |
550 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22082239 |
tttcaacattggaacaaaaatcaaacaaagaagaaaaacacactata |
22082193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 476; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 8 - 550
Target Start/End: Original strand, 37617236 - 37617779
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
37617236 |
actatatagcaatttgaaaatgagatacataacaccatctatcaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggctgc |
37617335 |
T |
|
| Q |
108 |
tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37617336 |
tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcaaaaaataatataattgagttagatctgctcaaata |
37617435 |
T |
|
| Q |
208 |
tcattat-aagtatttcatgttatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacag |
306 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37617436 |
tcattataaagtatttcatgctatactatcaataaaaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacag |
37617535 |
T |
|
| Q |
307 |
ttatagatgtaaatatttgaaagaaactctttataatataagtaaaattnnnnnnnntaaaaggatcttcaaattgagatggtaagcataaatataagaa |
406 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37617536 |
ttatacatgtaaaaatttgaaagaaactctttataatataagtaaaattaaaaaaaataaaaggatcttcaaattgagatggtaagcataaatataagaa |
37617635 |
T |
|
| Q |
407 |
atcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttatttt |
506 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37617636 |
atcaaactattcaaagtctctcccatcaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttatttt |
37617735 |
T |
|
| Q |
507 |
caacattggaacaaaaatcaaacaaagaagaaaaacacactata |
550 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37617736 |
caacattggaacaaaaatcaaacaaagaagaaaaacacactata |
37617779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 9203996 - 9203896
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
9203996 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
9203897 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
9203896 |
a |
9203896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 9208215 - 9208115
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
9208215 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
9208116 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
9208115 |
a |
9208115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 9203823 - 9203736
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
9203823 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
9203736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 364; Significance: 0; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 101 - 550
Target Start/End: Complemental strand, 19767617 - 19767170
Alignment:
| Q |
101 |
aggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgc |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19767617 |
aggttgctttaagatccaaatgtgtcgtacattttttgttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgc |
19767518 |
T |
|
| Q |
201 |
tcaaatatcattat-aagtatttcatgttatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaa |
299 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19767517 |
tcaaatatcattataaagtatttcatgctatactatcaataaaaaaaccaaagttgcaatgtaagctatctaaggctactccatattctaaatgattcaa |
19767418 |
T |
|
| Q |
300 |
cacacagttatagatgtaaatatttgaaagaaactctttataatataagtaaaattnnnnnnnntaaaaggatcttcaaattgagatggtaagcataaat |
399 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19767417 |
cacacagttatacatgtaaa-atttgaaagaaactc--tataatataagtaaaattaaaaaaaataaaaggatcttcaaattgagatggtaagcataaat |
19767321 |
T |
|
| Q |
400 |
ataagaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgt |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
19767320 |
ataagaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttaaattttcaaccaatgtaaacttcaaactaccaggaaatttgt |
19767221 |
T |
|
| Q |
500 |
ttattttcaacattggaacaaaaatcaaacaaagaagaaaaacacactata |
550 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19767220 |
ttattttcaacattggaacaaaaatcaaacaaagaagaaaaacacactata |
19767170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 45456419 - 45456604
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||| |
|
|
| T |
45456419 |
actatatagcaatttgaaaatgagatacataacaccatctgcaaagatacattctcaacataaaatatcatgctaaataaccttttgggttataggttgc |
45456518 |
T |
|
| Q |
108 |
tttaagatccaaatgtgtc-gtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagtt |
192 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
45456519 |
tttaagatccaaatgtgtcaatacatttttggttcatgcctaaagattttatgaagaatcctttcagaaaatgatataattgagtt |
45456604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 19768046 - 19767948
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19768046 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctgaacataaaatatcatgctaaatag-tttttgagttataggttgt |
19767948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 9 - 543
Target Start/End: Complemental strand, 40164848 - 40164310
Alignment:
| Q |
9 |
ctatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgtt |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
40164848 |
ctatatagcaatttgaaaatgagatacataacaccatcttccaagacacattatcaacataaaatatcatgctaaataactttttgagttataggttgct |
40164749 |
T |
|
| Q |
109 |
ttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaatat |
208 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
40164748 |
ttaagatccaaatgtgtcgtacatttttagttcaagcctaaag-ttttatgaagaatcctttcagaaaataatctaattgagttagatctgctcaaatat |
40164650 |
T |
|
| Q |
209 |
cattat-aagtatttcatgttatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacagt |
307 |
Q |
| |
|
|||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||| |
|
|
| T |
40164649 |
cattataaagcatttcatactatactatcaataaaaaaaccaaagttgcaatgtatgctatctaaggctattccatgttctaaattattca--acacagt |
40164552 |
T |
|
| Q |
308 |
tatagatgtaaatatttgaaagaaactctttataatataagtaaaattnnnnnnnntaaaaggatcttcaaattgagatggtaagcataaatataagaaa |
407 |
Q |
| |
|
|||| ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| ||| |
|
|
| T |
40164551 |
tatacatgtaaaaatttgaaagaaactc--tataatataagtaaaataaaaaaaaataaaaggatcttcaaattgagacggtaagcatatatataaaaaa |
40164454 |
T |
|
| Q |
408 |
tcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaacta------ccagc--aaatttgt |
499 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| | |||||||| |
|
|
| T |
40164453 |
acaaactattcaaagtctctcccaccaaataagtcaacacatttcgtttcaattttcaaccaatataaacttcaaactaaaatatccaccagaaatttgt |
40164354 |
T |
|
| Q |
500 |
ttattttcaacattggaacaaaaatcaaacaaagaagaaaaaca |
543 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||| ||||| |
|
|
| T |
40164353 |
ttattttcaacgttggaacaaaaattaaacaaagaagacaaaca |
40164310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 7e-69; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 6921690 - 6921503
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaat-agctttttgagttataggttg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| |
|
|
| T |
6921690 |
actatatagcaatttgaaaatgagatacataacaccatctgcaaagacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttg |
6921591 |
T |
|
| Q |
107 |
ttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcc--tttcagaaaataatataattgagtt |
192 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
6921590 |
ctttaagatccaaatgtgtcatacatttttggttcatgcctaaagattttatgaagaatcctttttcagaaaatgatataattgagtt |
6921503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 38238188 - 38238375
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaat-agctttttgagttataggttg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| |
|
|
| T |
38238188 |
actatatagcaatttgaaaatgagatacataacaccatctgcaaagacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttg |
38238287 |
T |
|
| Q |
107 |
ttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcc--tttcagaaaataatataattgagtt |
192 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
38238288 |
ctttaagatccaaatgtgtcatacatttttggttcatgcctaaagattttatgaagaatcctttttcagaaaatgatataattgagtt |
38238375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 216
Target Start/End: Original strand, 7827672 - 7827880
Alignment:
| Q |
8 |
actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| || |||||||||| |||||||||||| |||| |
|
|
| T |
7827672 |
actatatagcaatttgaaaatgagatacataacaacatctgccaagacacattctcagcataaaagataatgctaaataactttttgagttacttgttgc |
7827771 |
T |
|
| Q |
108 |
tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata |
207 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||| |||||||| |||| || |||| |
|
|
| T |
7827772 |
attaagattcaaatgtgtaatacatttttggttaaggcctaaagttgatataaagaatcctttcagaaaataatataactgagttaggtctgttcgaata |
7827871 |
T |
|
| Q |
208 |
tcattataa |
216 |
Q |
| |
|
||||||||| |
|
|
| T |
7827872 |
tcattataa |
7827880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 7827905 - 7827964
Alignment:
| Q |
492 |
aaatttgtttattttcaacattggaacaaaaatcaaaca-aagaagaaaaacacactata |
550 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |
|
|
| T |
7827905 |
aaatttgtttattttcaacattggaacataaatcaaacagaagaagaaaaacacattata |
7827964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: scaffold0135
Description:
Target: scaffold0135; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 2079 - 1979
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
2079 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
1980 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
1979 |
a |
1979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 6294 - 6194
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
6294 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
6195 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
6194 |
a |
6194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 10509 - 10409
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
10509 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
10410 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
10409 |
a |
10409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 14724 - 14624
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
14724 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
14625 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
14624 |
a |
14624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 18939 - 18839
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
18939 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
18840 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
18839 |
a |
18839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 23154 - 23054
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
23154 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
23055 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
23054 |
a |
23054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 27369 - 27269
Alignment:
| Q |
77 |
atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa |
176 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| | |||||| |||||| || || | |||||||||||||||||||||| |||| |||||| ||||| ||| |
|
|
| T |
27369 |
atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa |
27270 |
T |
|
| Q |
177 |
a |
177 |
Q |
| |
|
| |
|
|
| T |
27269 |
a |
27269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 1906 - 1819
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
1906 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
1819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 6121 - 6034
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
6121 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
6034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 10336 - 10249
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
10336 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
10249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 14551 - 14464
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
14551 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
14464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 18766 - 18679
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
18766 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
18679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 22981 - 22894
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
22981 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
22894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 27196 - 27109
Alignment:
| Q |
253 |
ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaatatttgaaagaaactcttt |
338 |
Q |
| |
|
||||| ||||||||| ||||||||| || | |||||||||| | |||||||| ||||| ||||||| ||| |||||||||||||| |
|
|
| T |
27196 |
ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt |
27109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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