View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4559_high_5 (Length: 509)

Name: NF4559_high_5
Description: NF4559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4559_high_5
NF4559_high_5
[»] chr3 (50 HSPs)
chr3 (142-505)||(52824040-52824403)
chr3 (83-144)||(33644324-33644385)
chr3 (1-53)||(33644242-33644294)
chr3 (1-53)||(53982053-53982105)
chr3 (83-137)||(53982135-53982189)
chr3 (83-144)||(48587016-48587077)
chr3 (1-53)||(8076435-8076487)
chr3 (83-143)||(11095283-11095343)
chr3 (1-53)||(27714897-27714949)
chr3 (1-53)||(31456731-31456783)
chr3 (1-53)||(52629342-52629394)
chr3 (3-53)||(17470449-17470499)
chr3 (83-137)||(31456813-31456867)
chr3 (83-137)||(49607538-49607592)
chr3 (83-144)||(52629424-52629485)
chr3 (83-144)||(54868810-54868871)
chr3 (1-53)||(49607456-49607508)
chr3 (1-53)||(54868901-54868953)
chr3 (83-137)||(11347844-11347898)
chr3 (83-137)||(9563123-9563177)
chr3 (83-137)||(20764837-20764891)
chr3 (83-137)||(26141452-26141506)
chr3 (3-53)||(26141538-26141588)
chr3 (87-137)||(33118772-33118822)
chr3 (83-137)||(36707350-36707404)
chr3 (89-137)||(30801655-30801703)
chr3 (1-49)||(48587101-48587149)
chr3 (2-53)||(26754738-26754789)
chr3 (1-35)||(11095377-11095411)
chr3 (3-53)||(20764921-20764971)
chr3 (87-137)||(35536754-35536804)
chr3 (83-137)||(41189686-41189740)
chr3 (83-137)||(51419282-51419336)
chr3 (3-53)||(51419366-51419416)
chr3 (1-38)||(33118872-33118909)
chr3 (84-137)||(35965704-35965757)
chr3 (89-137)||(27714825-27714873)
chr3 (1-53)||(41189770-41189822)
chr3 (83-142)||(17470529-17470588)
chr3 (1-44)||(36707439-36707482)
chr3 (87-137)||(8076521-8076571)
chr3 (3-53)||(11907415-11907465)
chr3 (83-137)||(47531989-47532043)
chr3 (13-53)||(9563053-9563093)
chr3 (1-53)||(11347928-11347980)
chr3 (1-53)||(13898061-13898113)
chr3 (93-137)||(26754829-26754873)
chr3 (5-53)||(30801739-30801787)
chr3 (1-49)||(36331339-36331387)
chr3 (93-137)||(48375628-48375672)
[»] chr7 (49 HSPs)
chr7 (83-144)||(19329966-19330027)
chr7 (1-53)||(7389431-7389483)
chr7 (1-53)||(38267082-38267134)
chr7 (87-142)||(8080300-8080355)
chr7 (83-137)||(3434676-3434730)
chr7 (83-144)||(38837341-38837402)
chr7 (1-53)||(3784037-3784089)
chr7 (1-53)||(19329884-19329936)
chr7 (1-53)||(36361919-36361971)
chr7 (1-53)||(36362068-36362120)
chr7 (83-142)||(4999431-4999490)
chr7 (3-53)||(38837261-38837311)
chr7 (1-53)||(3434604-3434656)
chr7 (1-53)||(4999520-4999572)
chr7 (1-53)||(8080389-8080441)
chr7 (1-53)||(19436193-19436245)
chr7 (1-53)||(35137575-35137627)
chr7 (83-143)||(36362138-36362198)
chr7 (83-143)||(40957831-40957891)
chr7 (83-142)||(32951410-32951469)
chr7 (3-53)||(3694411-3694461)
chr7 (7-53)||(32951499-32951545)
chr7 (83-137)||(46374746-46374800)
chr7 (83-132)||(19436114-19436163)
chr7 (83-143)||(7389513-7389572)
chr7 (5-53)||(40957753-40957801)
chr7 (83-142)||(36361842-36361901)
chr7 (83-137)||(35523000-35523054)
chr7 (83-137)||(46033723-46033777)
chr7 (3-53)||(46374808-46374858)
chr7 (1-49)||(8238255-8238303)
chr7 (1-53)||(36208215-36208267)
chr7 (83-142)||(11044302-11044361)
chr7 (83-137)||(2318163-2318217)
chr7 (83-137)||(16374746-16374800)
chr7 (83-137)||(21234525-21234579)
chr7 (83-129)||(31736001-31736047)
chr7 (87-137)||(41423810-41423860)
chr7 (1-53)||(16374830-16374882)
chr7 (1-53)||(21234443-21234495)
chr7 (83-142)||(35137657-35137716)
chr7 (19-49)||(11044238-11044268)
chr7 (3-53)||(35522920-35522970)
chr7 (83-137)||(38044321-38044375)
chr7 (96-137)||(12311041-12311082)
chr7 (96-137)||(39255846-39255887)
chr7 (1-41)||(2318261-2318301)
chr7 (1-49)||(38044239-38044287)
chr7 (3-51)||(46033809-46033857)
[»] chr4 (43 HSPs)
chr4 (83-142)||(41236471-41236530)
chr4 (1-53)||(48183055-48183107)
chr4 (1-53)||(50052434-50052486)
chr4 (84-142)||(24995024-24995082)
chr4 (3-53)||(42044373-42044423)
chr4 (83-144)||(42044282-42044343)
chr4 (84-137)||(48182971-48183024)
chr4 (1-53)||(480453-480505)
chr4 (1-53)||(11511468-11511520)
chr4 (1-53)||(41236389-41236441)
chr4 (1-53)||(54473539-54473591)
chr4 (83-137)||(6034168-6034222)
chr4 (3-53)||(41823926-41823976)
chr4 (1-53)||(3481696-3481748)
chr4 (1-53)||(6034086-6034138)
chr4 (1-53)||(24995113-24995165)
chr4 (10-53)||(29234251-29234294)
chr4 (87-137)||(29240014-29240064)
chr4 (1-53)||(23608277-23608329)
chr4 (83-143)||(23608359-23608419)
chr4 (1-53)||(29239928-29239980)
chr4 (1-53)||(31910234-31910286)
chr4 (1-52)||(50526178-50526229)
chr4 (3-53)||(29977929-29977979)
chr4 (83-137)||(54473455-54473509)
chr4 (3-51)||(53352574-53352622)
chr4 (94-137)||(50052350-50052393)
chr4 (94-137)||(53352496-53352539)
chr4 (84-142)||(11511380-11511437)
chr4 (83-137)||(31910316-31910370)
chr4 (83-137)||(41824006-41824060)
chr4 (3-53)||(48647732-48647782)
chr4 (87-137)||(50526093-50526143)
chr4 (90-129)||(40574910-40574949)
chr4 (83-137)||(19670638-19670692)
chr4 (3-53)||(28480274-28480324)
chr4 (3-53)||(28481149-28481199)
chr4 (3-53)||(28482024-28482074)
chr4 (83-137)||(29547881-29547935)
chr4 (83-137)||(55475315-55475369)
chr4 (83-124)||(480382-480423)
chr4 (1-49)||(17983753-17983801)
chr4 (1-49)||(50813902-50813950)
[»] chr1 (48 HSPs)
chr1 (83-142)||(27564652-27564711)
chr1 (83-137)||(37649322-37649376)
chr1 (83-137)||(48716204-48716258)
chr1 (1-53)||(2581957-2582009)
chr1 (83-137)||(41758929-41758983)
chr1 (1-53)||(43174-43226)
chr1 (1-53)||(3000361-3000413)
chr1 (1-53)||(8346394-8346446)
chr1 (1-53)||(9474882-9474934)
chr1 (1-53)||(27564741-27564793)
chr1 (1-53)||(38595196-38595248)
chr1 (5-53)||(44548382-44548430)
chr1 (1-53)||(48716288-48716340)
chr1 (5-53)||(50630504-50630552)
chr1 (1-53)||(51898689-51898741)
chr1 (7-53)||(38632327-38632373)
chr1 (83-143)||(9474792-9474852)
chr1 (1-53)||(13414803-13414855)
chr1 (83-127)||(38632253-38632297)
chr1 (1-53)||(47452326-47452378)
chr1 (83-142)||(26274553-26274612)
chr1 (3-53)||(32813291-32813341)
chr1 (83-137)||(32813371-32813425)
chr1 (87-137)||(47452242-47452292)
chr1 (1-53)||(41758847-41758899)
chr1 (83-142)||(43256-43315)
chr1 (2-52)||(11152385-11152435)
chr1 (83-137)||(50630582-50630636)
chr1 (1-53)||(37649240-37649292)
chr1 (90-142)||(38595285-38595337)
chr1 (83-142)||(2582039-2582098)
chr1 (90-137)||(3000450-3000497)
chr1 (2-53)||(48489343-48489394)
chr1 (83-137)||(49811449-49811503)
chr1 (87-137)||(51898605-51898655)
chr1 (1-49)||(5959010-5959058)
chr1 (1-53)||(44334176-44334228)
chr1 (1-53)||(45044566-45044618)
chr1 (2-53)||(3302539-3302590)
chr1 (3-53)||(6260914-6260964)
chr1 (83-137)||(8346309-8346363)
chr1 (3-53)||(26440778-26440828)
chr1 (83-129)||(37926368-37926414)
chr1 (83-137)||(45044482-45044536)
chr1 (1-49)||(26274474-26274522)
chr1 (5-53)||(44454025-44454073)
chr1 (1-53)||(49811533-49811585)
chr1 (1-49)||(50591010-50591058)
[»] chr6 (28 HSPs)
chr6 (83-153)||(29857951-29858021)
chr6 (83-149)||(32869802-32869868)
chr6 (1-53)||(32869720-32869772)
chr6 (83-142)||(11427742-11427801)
chr6 (83-145)||(17598678-17598740)
chr6 (1-53)||(11427660-11427712)
chr6 (1-53)||(17598596-17598648)
chr6 (1-53)||(22880664-22880716)
chr6 (83-137)||(15832701-15832755)
chr6 (83-143)||(22880574-22880634)
chr6 (1-53)||(23128133-23128185)
chr6 (1-53)||(6209471-6209523)
chr6 (3-53)||(29857871-29857921)
chr6 (3-53)||(31976292-31976342)
chr6 (83-137)||(31976372-31976426)
chr6 (1-45)||(31109414-31109458)
chr6 (1-48)||(15832619-15832666)
chr6 (83-137)||(31110683-31110737)
chr6 (1-53)||(28536494-28536544)
chr6 (83-142)||(23128043-23128103)
chr6 (83-142)||(6209383-6209441)
chr6 (83-137)||(4231672-4231726)
chr6 (95-137)||(22422001-22422043)
chr6 (87-137)||(31952952-31953002)
chr6 (4-49)||(4231593-4231638)
chr6 (1-49)||(15508034-15508082)
chr6 (1-49)||(15990052-15990100)
chr6 (1-49)||(30341370-30341418)
[»] chr2 (52 HSPs)
chr2 (83-145)||(7465649-7465711)
chr2 (1-53)||(10249388-10249440)
chr2 (1-53)||(13438385-13438437)
chr2 (1-53)||(28863497-28863549)
chr2 (1-53)||(32505654-32505706)
chr2 (83-137)||(5574422-5574476)
chr2 (83-137)||(10249304-10249358)
chr2 (83-137)||(13438467-13438521)
chr2 (83-137)||(17473144-17473198)
chr2 (83-137)||(28863579-28863633)
chr2 (83-144)||(19930735-19930796)
chr2 (1-53)||(7465741-7465793)
chr2 (1-53)||(9058522-9058574)
chr2 (1-53)||(17473062-17473114)
chr2 (1-53)||(33436106-33436158)
chr2 (87-137)||(20700943-20700993)
chr2 (83-137)||(38882733-38882787)
chr2 (84-137)||(32505570-32505623)
chr2 (84-137)||(40613824-40613877)
chr2 (1-53)||(5574494-5574546)
chr2 (90-142)||(28381572-28381624)
chr2 (1-53)||(40701520-40701572)
chr2 (2-53)||(28381661-28381712)
chr2 (83-142)||(40701602-40701661)
chr2 (1-53)||(19930826-19930878)
chr2 (9-53)||(20700865-20700909)
chr2 (1-53)||(27864746-27864798)
chr2 (1-53)||(30915505-30915557)
chr2 (1-53)||(40613908-40613960)
chr2 (2-53)||(3737986-3738037)
chr2 (83-142)||(4060809-4060868)
chr2 (83-142)||(27864815-27864874)
chr2 (83-137)||(9058604-9058658)
chr2 (83-137)||(30915587-30915641)
chr2 (83-137)||(33436022-33436076)
chr2 (3-53)||(38273148-38273198)
chr2 (1-42)||(38882831-38882872)
chr2 (85-125)||(2533249-2533289)
chr2 (1-53)||(4060727-4060779)
chr2 (1-53)||(42257235-42257287)
chr2 (2-53)||(26891510-26891561)
chr2 (7-53)||(2533171-2533217)
chr2 (83-137)||(36168960-36169014)
chr2 (83-132)||(42257317-42257366)
chr2 (93-137)||(3440113-3440157)
chr2 (1-53)||(17820010-17820062)
chr2 (1-49)||(38732396-38732444)
chr2 (2-53)||(3440022-3440073)
chr2 (90-137)||(17823919-17823966)
chr2 (6-51)||(36168883-36168928)
chr2 (1-49)||(2997497-2997545)
chr2 (1-49)||(43490163-43490211)
[»] scaffold0237 (2 HSPs)
scaffold0237 (83-144)||(4153-4214)
scaffold0237 (3-53)||(4073-4123)
[»] chr8 (46 HSPs)
chr8 (83-144)||(14548046-14548107)
chr8 (83-152)||(34012203-34012272)
chr8 (1-53)||(504127-504179)
chr8 (1-53)||(12831089-12831141)
chr8 (1-53)||(14547964-14548016)
chr8 (1-53)||(15197375-15197427)
chr8 (83-137)||(504043-504097)
chr8 (83-137)||(23122519-23122573)
chr8 (1-53)||(8841438-8841490)
chr8 (1-53)||(10284637-10284689)
chr8 (1-53)||(23122603-23122655)
chr8 (1-53)||(37038521-37038573)
chr8 (83-143)||(42710210-42710270)
chr8 (83-137)||(12831171-12831225)
chr8 (1-53)||(5957872-5957924)
chr8 (1-53)||(34012302-34012354)
chr8 (1-53)||(40423949-40424001)
chr8 (3-51)||(44507095-44507143)
chr8 (3-53)||(9122229-9122279)
chr8 (83-137)||(9122309-9122363)
chr8 (83-137)||(40423865-40423919)
chr8 (83-137)||(43414503-43414557)
chr8 (85-146)||(15197459-15197520)
chr8 (1-53)||(1179946-1179998)
chr8 (83-137)||(1179862-1179916)
chr8 (7-53)||(15048188-15048234)
chr8 (1-53)||(10621093-10621145)
chr8 (1-53)||(43414587-43414639)
chr8 (87-137)||(5957958-5958008)
chr8 (87-137)||(8841354-8841404)
chr8 (83-129)||(15048111-15048157)
chr8 (87-137)||(37038607-37038657)
chr8 (87-137)||(42354510-42354560)
chr8 (83-137)||(44507010-44507063)
chr8 (2-53)||(15258935-15258986)
chr8 (2-53)||(42221558-42221609)
chr8 (83-137)||(4854785-4854839)
chr8 (87-137)||(10284553-10284603)
chr8 (83-137)||(16056323-16056377)
chr8 (83-137)||(24307715-24307769)
chr8 (83-137)||(32707925-32707979)
chr8 (1-42)||(14055609-14055650)
chr8 (3-48)||(17443869-17443914)
chr8 (1-38)||(38229470-38229507)
chr8 (1-49)||(16056411-16056459)
chr8 (1-49)||(16383419-16383467)
[»] chr5 (32 HSPs)
chr5 (83-151)||(2740398-2740467)
chr5 (83-152)||(33149545-33149614)
chr5 (1-53)||(13811694-13811746)
chr5 (1-53)||(18520890-18520942)
chr5 (83-146)||(14831938-14832001)
chr5 (1-53)||(2740316-2740368)
chr5 (1-53)||(36732948-36733000)
chr5 (1-53)||(42414308-42414360)
chr5 (3-53)||(31009032-31009082)
chr5 (83-137)||(35785323-35785377)
chr5 (7-53)||(40145455-40145501)
chr5 (1-53)||(14831856-14831908)
chr5 (1-53)||(15409616-15409668)
chr5 (83-143)||(18520800-18520860)
chr5 (1-53)||(33149644-33149696)
chr5 (83-129)||(36732872-36732918)
chr5 (83-144)||(40145531-40145592)
chr5 (1-53)||(6679740-6679792)
chr5 (1-53)||(28177817-28177869)
chr5 (7-51)||(31132392-31132436)
chr5 (1-53)||(35785241-35785293)
chr5 (1-53)||(35943898-35943950)
chr5 (83-133)||(13811776-13811826)
chr5 (83-137)||(15409532-15409586)
chr5 (87-137)||(31009116-31009166)
chr5 (83-137)||(31132458-31132512)
chr5 (95-144)||(16115247-16115296)
chr5 (13-50)||(41470425-41470462)
chr5 (3-53)||(21370048-21370098)
chr5 (87-137)||(35943814-35943864)
chr5 (1-49)||(2252178-2252226)
chr5 (1-49)||(3921275-3921323)
[»] scaffold0321 (2 HSPs)
scaffold0321 (83-143)||(10025-10085)
scaffold0321 (1-53)||(10115-10167)
[»] scaffold1268 (2 HSPs)
scaffold1268 (87-137)||(851-901)
scaffold1268 (7-53)||(935-981)
[»] scaffold1267 (2 HSPs)
scaffold1267 (87-137)||(851-901)
scaffold1267 (7-53)||(935-981)
[»] scaffold0316 (2 HSPs)
scaffold0316 (2-53)||(17097-17148)
scaffold0316 (94-137)||(17238-17281)
[»] scaffold0110 (2 HSPs)
scaffold0110 (90-137)||(8785-8832)
scaffold0110 (9-49)||(8873-8913)


Alignment Details
Target: chr3 (Bit Score: 352; Significance: 0; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 142 - 505
Target Start/End: Original strand, 52824040 - 52824403
Alignment:
Q  142 tttgtttattgtcaggaagatagagcgattgtgtgcaaagagtgtgatttgaaggttcatggtgtcaacgaacacaccaagaagcataataggtttcttc 241  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52824040 tttgttttttgtcaggaagatagagcgattgtgtgcaaagagtgtgatttgaaggttcacggtgtcaacgaacacaccaagaagcataataggtttcttc 52824139  T
Q  242 taagtgggatcaagctgcactctcctgctcctcctcccactcttcatgaagaaactggtaattttactatatctgagtacttgataaacactatcccagg 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824140 taagtgggatcaagctgcactctcctgctcctcctcccactcttcatgaagaaactggtaattttactatatctgagtacttgataaacactatcccagg 52824239  T
Q  342 ttggaagtttgaagatttccttgattccccttcttcttctgttccctctcatgaactacaacaccagaatcatatagtgcatgatgatgctaattatcat 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824240 ttggaagtttgaagatttccttgattccccttcttcttctgttccctctcatgaactacaacaccagaatcatatagtgcatgatgatgctaattatcat 52824339  T
Q  442 attcatgaggaaaatattctggtttctttctctagcgagagcatgcgtaggatctgtgctcctc 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52824340 attcatgaggaaaatattctggtttctttctctagcgagagcatgcgtaggatctgtgttcctc 52824403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 33644324 - 33644385
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  33644324 ctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcattactcttt 33644385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33644242 - 33644294
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33644242 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53982053 - 53982105
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53982053 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 53982135 - 53982189
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53982135 ctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 48587077 - 48587016
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  48587077 ctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcattactcttt 48587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8076435 - 8076487
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8076435 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 11095343 - 11095283
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  11095343 ctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactctt 11095283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27714949 - 27714897
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27714949 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31456731 - 31456783
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31456731 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52629342 - 52629394
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52629342 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 17470449 - 17470499
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17470449 acacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 31456813 - 31456867
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  31456813 ctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcatt 31456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 49607538 - 49607592
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  49607538 ctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 49607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 52629424 - 52629485
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  52629424 ctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcattactcttt 52629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 54868871 - 54868810
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  54868871 ctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactcttt 54868810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49607456 - 49607508
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  49607456 tgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54868953 - 54868901
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  54868953 tgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 11347898 - 11347844
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  11347898 ctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccatt 11347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 9563123 - 9563177
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| | ||||||| |||||||||||||||||||| |||||||||||||    
T  9563123 ctaatgcatgagttgtacaaaggtgtatgggaataaagggtatctatgtatcatt 9563177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 20764891 - 20764837
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  20764891 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 20764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 26141506 - 26141452
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  26141506 ctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 26141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 26141588 - 26141538
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  26141588 acacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 33118822 - 33118772
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  33118822 tgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacatt 33118772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 36707404 - 36707350
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||||  |||||||||||||| |||||||||||||||||    
T  36707404 ctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatt 36707350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 30801703 - 30801655
Alignment:
Q  89 catggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  30801703 catggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 30801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48587149 - 48587101
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  48587149 tgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26754738 - 26754789
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||||||    
T  26754738 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11095411 - 11095377
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  11095411 tgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 20764971 - 20764921
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| ||||||||| |||||||||    
T  20764971 acacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 35536754 - 35536804
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  35536754 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 41189740 - 41189686
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||| ||||||||| |||||||| ||||||||||||||||||| ||||    
T  41189740 ctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 41189686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 51419336 - 51419282
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  51419336 ctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacatt 51419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 51419416 - 51419366
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| | |||||||||||||||||    
T  51419416 acacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33118909 - 33118872
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtgga 38  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33118909 tgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 35965757 - 35965704
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||    
T  35965757 taattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 35965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 27714873 - 27714825
Alignment:
Q  89 catggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||| | |||||||| |||| |||||||||||    
T  27714873 catggggtgtacaagggtgtacgagaataaagagtgtatatgtatcatt 27714825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41189822 - 41189770
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||| |||||||| | ||| |||||||||||||||||||    
T  41189822 tgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 17470529 - 17470588
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    |||||||||||| |||||||   |||||| ||||||| ||||||||||||||||| ||||    
T  17470529 ctaatgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcattactct 17470588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36707482 - 36707439
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgc 44  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||    
T  36707482 tgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 8076521 - 8076571
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||  ||||||| ||||||| |||||||||||| ||||    
T  8076521 tgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacatt 8076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 11907415 - 11907465
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| || ||||  |||||||||||||||||||    
T  11907415 acactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 47531989 - 47532043
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| |||||| ||||    
T  47531989 ctaatgtatggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacatt 47532043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 9563053 - 9563093
Alignment:
Q  13 aaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  9563053 aaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11347980 - 11347928
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||| | ||| ||||||| ||| |||||||    
T  11347980 tgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13898113 - 13898061
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||  ||| ||||||| | ||||||||||    
T  13898113 tgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 26754829 - 26754873
Alignment:
Q  93 gggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  26754829 gggtgtacaaaggtgtatggaaataaagagtgtctatgtaacatt 26754873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30801787 - 30801739
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||| ||||| |||||||  |||||||| ||||||||||    
T  30801787 acccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36331387 - 36331339
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  36331387 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 48375672 - 48375628
Alignment:
Q  93 gggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  48375672 gggtgtacaaagatgtatggaaataaagggtgtctatgtaacatt 48375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 19329966 - 19330027
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19329966 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcttt 19330027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7389431 - 7389483
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7389431 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38267082 - 38267134
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38267082 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 8080355 - 8080300
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8080355 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 8080300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 3434676 - 3434730
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3434676 ctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcatt 3434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 38837341 - 38837402
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  38837341 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactcttt 38837402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3784037 - 3784089
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3784037 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19329884 - 19329936
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19329884 tgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36361971 - 36361919
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36361971 tgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36362068 - 36362120
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36362068 tgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 4999490 - 4999431
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  4999490 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactct 4999431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 38837261 - 38837311
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38837261 acacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3434604 - 3434656
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  3434604 tgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4999572 - 4999520
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4999572 tgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8080441 - 8080389
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  8080441 tgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19436245 - 19436193
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  19436245 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35137575 - 35137627
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  35137575 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 36362138 - 36362198
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  36362138 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcattactctt 36362198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 40957831 - 40957891
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||    
T  40957831 ctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcattactctt 40957891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 32951469 - 32951410
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  32951469 ctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattactct 32951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 3694411 - 3694461
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  3694411 acacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 32951545 - 32951499
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32951545 ccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 46374800 - 46374746
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 46374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 19436163 - 19436114
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgta 132  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19436163 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 7389513 - 7389572
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  7389513 ctaatacatggggtgtaca-gggtgtatgggaataaaggatgtctatgtatcattactctt 7389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 40957753 - 40957801
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40957753 acccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 36361901 - 36361842
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36361901 ctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 36361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 35523000 - 35523054
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  35523000 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacatt 35523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 46033777 - 46033723
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  46033777 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 46374858 - 46374808
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  46374858 acacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8238255 - 8238303
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||    
T  8238255 tgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36208215 - 36208267
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||| |||||| || ||||||||||||| |||||||||||    
T  36208215 tgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 11044302 - 11044361
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    |||||||||| ||||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  11044302 ctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcattactct 11044361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 2318217 - 2318163
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||    
T  2318217 ctaatgcatggagtgtacaaaggtgtatggaaataaagtgtgtctatgtaacatt 2318163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 16374800 - 16374746
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||| ||||    
T  16374800 ctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 21234525 - 21234579
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||||||||| ||||    
T  21234525 ctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacatt 21234579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 31736001 - 31736047
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 129  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||    
T  31736001 ctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctat 31736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 41423810 - 41423860
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||| ||||    
T  41423810 tgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacatt 41423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16374882 - 16374830
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||| |||||||||| | | ||||||||||    
T  16374882 tgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21234443 - 21234495
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||| ||||||||||| |||||||||| ||| || ||||||||||||||||    
T  21234443 tgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 35137657 - 35137716
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    |||||||||||| |||||||||||||||| ||| ||| ||| |||||| |||||| ||||    
T  35137657 ctaatgcatgggatgtacaagggtgtatgagaacaaatggtatctatggatcattactct 35137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 11044238 - 11044268
Alignment:
Q  19 ctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||||||||||    
T  11044238 ctgacacgtagtcacgtggaccccgcacaag 11044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 35522920 - 35522970
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||  |||| ||||||||||||||    
T  35522920 acacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 38044321 - 38044375
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  38044321 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 38044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 12311041 - 12311082
Alignment:
Q  96 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||    
T  12311041 tgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 12311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 39255887 - 39255846
Alignment:
Q  96 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||  ||||||||||||||||||| ||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgtaacatt 39255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2318301 - 2318261
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccc 41  Q
    |||||||||||||||||||||||  || |||||||||||||    
T  2318301 tgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38044239 - 38044287
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    ||||| |||||||||||||||||| |||| ||  |||||||||||||||    
T  38044239 tgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 46033857 - 46033809
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||||||| ||||||||||||||| ||||| || || |||||||||||    
T  46033857 acacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 41236471 - 41236530
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41236471 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 41236530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48183107 - 48183055
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48183107 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50052486 - 50052434
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50052486 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 24995082 - 24995024
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24995082 taatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcattactct 24995024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 42044423 - 42044373
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42044423 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 42044343 - 42044282
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  42044343 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactcttt 42044282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 48183024 - 48182971
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48183024 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 480505 - 480453
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  480505 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11511520 - 11511468
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11511520 tgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41236389 - 41236441
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41236389 tgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54473591 - 54473539
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54473591 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 6034168 - 6034222
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  6034168 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 41823926 - 41823976
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3481696 - 3481748
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  3481696 tgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6034086 - 6034138
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6034086 tgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24995165 - 24995113
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  24995165 tgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 29234294 - 29234251
Alignment:
Q  10 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29234294 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 29240014 - 29240064
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29240014 tgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23608277 - 23608329
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  23608277 tgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 23608359 - 23608419
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||||||||||| |||||    
T  23608359 ctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactctt 23608419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29239928 - 29239980
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  29239928 tgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31910234 - 31910286
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  31910234 tgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 50526229 - 50526178
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 52  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  50526229 tgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 29977929 - 29977979
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  29977929 acacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 54473509 - 54473455
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  54473509 ctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcatt 54473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 53352622 - 53352574
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  53352622 acacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 50052393 - 50052350
Alignment:
Q  94 ggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  50052393 ggtgtacaaaggtgtatgggaataaagggtgtctatgtaacatt 50052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 53352539 - 53352496
Alignment:
Q  94 ggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  53352539 ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 53352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 11511437 - 11511380
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||| ||||||||||||||||||| ||||||  |||||||||||||||| ||||    
T  11511437 taatgcatgaggtgtacaagggtgtatggaaataaa-tgtgtctatgtatcattactct 11511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 31910316 - 31910370
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  31910316 ctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacatt 31910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 41824006 - 41824060
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||| |||||||| ||||||| |||||||||||| ||||    
T  41824006 ctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacatt 41824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 48647782 - 48647732
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||| |||||||| |||||| ||||||||||| |||||||||||||    
T  48647782 acacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 50526143 - 50526093
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||    
T  50526143 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 50526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 40574910 - 40574949
Alignment:
Q  90 atggggtgtacaagggtgtatgggaataaagggtgtctat 129  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  40574910 atggggtgtacaagggtgtatgagaataaaaggtgtctat 40574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 19670692 - 19670638
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  19670692 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 19670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28480324 - 28480274
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28480324 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28481199 - 28481149
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28481199 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28482074 - 28482024
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28482074 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 29547935 - 29547881
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  29547935 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 29547881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 55475315 - 55475369
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  55475315 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 55475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 480423 - 480382
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtg 124  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  480423 ctaatgcatggggtgtacaaaggtgtatggaaataatgggtg 480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17983801 - 17983753
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  17983801 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50813950 - 50813902
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || ||||  || ||||||||||||    
T  50813950 tgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 27564711 - 27564652
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27564711 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 27564652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 37649322 - 37649376
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37649322 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 48716258 - 48716204
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48716258 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2581957 - 2582009
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2581957 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 41758929 - 41758983
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41758929 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43174 - 43226
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43174 tgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3000361 - 3000413
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3000361 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8346446 - 8346394
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8346446 tgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9474934 - 9474882
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9474934 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27564793 - 27564741
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27564793 tgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38595196 - 38595248
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38595196 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 44548430 - 44548382
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44548430 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48716340 - 48716288
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48716340 tgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 50630504 - 50630552
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50630504 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51898741 - 51898689
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51898741 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 38632373 - 38632327
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  38632373 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 9474852 - 9474792
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||    
T  9474852 ctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcattactctt 9474792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13414803 - 13414855
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  13414803 tgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 38632297 - 38632253
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38632297 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47452378 - 47452326
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  47452378 tgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 26274553 - 26274612
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    |||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||||    
T  26274553 ctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcattactct 26274612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 32813291 - 32813341
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32813291 acacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 32813371 - 32813425
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  32813371 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 47452292 - 47452242
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  47452292 tgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcatt 47452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41758847 - 41758899
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  41758847 tgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 43256 - 43315
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||| ||||    
T  43256 ctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcattactct 43315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 11152435 - 11152385
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 52  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  11152435 gacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 50630582 - 50630636
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||    
T  50630582 ctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatgcatcatt 50630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37649240 - 37649292
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||||||| |  |||||||||||||    
T  37649240 tgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 38595285 - 38595337
Alignment:
Q  90 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||| ||||    
T  38595285 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactct 38595337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 2582039 - 2582098
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||| |||| |||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  2582039 ctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcattactct 2582098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 3000450 - 3000497
Alignment:
Q  90 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||    
T  3000450 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 3000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 48489343 - 48489394
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||||||||||||||| || |||||||||| ||||||||||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 49811503 - 49811449
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||| ||||    
T  49811503 ctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 51898655 - 51898605
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||    
T  51898655 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 51898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5959058 - 5959010
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || ||||  |||||||||||||||    
T  5959058 tgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44334228 - 44334176
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| |||||| ||||    
T  44334228 tgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45044618 - 45044566
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||| |||||||||||||| |||| ||| |||||||||||||| ||||    
T  45044618 tgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 3302590 - 3302539
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||  ||||||||  |||||||||    
T  3302590 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 3302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 6260914 - 6260964
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||| |||||||| ||| || ||||||||||||||||| |||||||    
T  6260914 acacccacataaaaatctaacatgtggtcacgtggaccccgcataagcaca 6260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 8346363 - 8346309
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||| |||||||| |||||||| ||||||| ||| | |||||||||||    
T  8346363 ctaatgcatggagtgtacaaaggtgtatgagaataaatggtatttatgtatcatt 8346309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 26440778 - 26440828
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| |||| |||||| |||||||    
T  26440778 acacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 37926414 - 37926368
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 129  Q
    |||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  37926414 ctaatgtatggggtgtacaaggatgtatgtgaataaatggtgtctat 37926368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 45044536 - 45044482
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||| ||||||| | |||||| ||| ||||    
T  45044536 ctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacatt 45044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26274474 - 26274522
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    ||||| ||||| ||||||||||||| |||||||||||| || |||||||    
T  26274474 tgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44454025 - 44454073
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| || || ||||||| ||| ||||||||||    
T  44454025 acccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49811585 - 49811533
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||||| ||  | ||| |||||||||||||    
T  49811585 tgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50591058 - 50591010
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  50591058 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 29857951 - 29858021
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgtttattgt 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||    
T  29857951 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactcttttttttttgt 29858021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 32869802 - 32869868
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgttta 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  32869802 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcttttttta 32869868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32869720 - 32869772
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32869720 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 11427742 - 11427801
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11427742 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 11427801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 17598678 - 17598740
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttg 145  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  17598678 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactctttg 17598740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11427660 - 11427712
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11427660 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17598596 - 17598648
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17598596 tgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22880716 - 22880664
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22880716 tgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 15832701 - 15832755
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  15832701 ctaatgcatggggtgtacaagggtgtattggaataaagggtgtctacgtatcatt 15832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 22880634 - 22880574
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  22880634 ctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcattactctt 22880574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23128185 - 23128133
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  23128185 tgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6209523 - 6209471
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  6209523 tgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 29857871 - 29857921
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  29857871 acacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31976292 - 31976342
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  31976292 acacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 31976372 - 31976426
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  31976372 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 31976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31109458 - 31109414
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgca 45  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  31109458 tgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15832619 - 15832666
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 48  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||||    
T  15832619 tgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 31110737 - 31110683
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  31110737 ctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacatt 31110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28536544 - 28536494
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||  |||| ||||||||| ||||||||||    
T  28536544 tgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 23128103 - 23128043
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaat-aaagggtgtctatgtatcattcctct 142  Q
    |||||||||||| ||||||||||||||||| ||| ||||| | ||||||||||||| ||||    
T  23128103 ctaatgcatgggatgtacaagggtgtatggaaataaaaggttctctatgtatcattactct 23128043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 6209441 - 6209383
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    |||||||||||| ||||||| | |||| ||||||||||||| ||||||||||||| ||||    
T  6209441 ctaatgcatgggatgtacaaagatgta-gggaataaagggtatctatgtatcattactct 6209383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 4231672 - 4231726
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  4231672 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 4231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 22422043 - 22422001
Alignment:
Q  95 gtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 22422001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 31953002 - 31952952
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||| |||| |||||| ||||||| |||||||||||| ||||    
T  31953002 tgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 31952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4231593 - 4231638
Alignment:
Q  4 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| | ||  |||||||||||||||    
T  4231593 cacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15508082 - 15508034
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  15508082 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15990100 - 15990052
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  15990100 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30341418 - 30341370
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  30341418 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 7465711 - 7465649
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttg 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7465711 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactctttg 7465649  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10249440 - 10249388
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10249440 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

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Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13438385 - 13438437
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13438385 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

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Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28863497 - 28863549
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28863497 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

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Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32505706 - 32505654
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32505706 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 5574476 - 5574422
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5574476 ctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 5574422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 10249358 - 10249304
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10249358 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 13438467 - 13438521
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13438467 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 17473144 - 17473198
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17473144 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 28863579 - 28863633
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28863579 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 19930796 - 19930735
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  19930796 ctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattactcttt 19930735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7465793 - 7465741
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7465793 tgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9058522 - 9058574
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9058522 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17473062 - 17473114
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17473062 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33436158 - 33436106
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33436158 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 20700943 - 20700993
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20700943 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 20700993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 38882787 - 38882733
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38882787 ctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcatt 38882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 32505623 - 32505570
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcatt 32505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 40613877 - 40613824
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 40613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5574546 - 5574494
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  5574546 tgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 28381624 - 28381572
Alignment:
Q  90 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  28381624 atggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 28381572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40701520 - 40701572
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  40701520 tgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 28381712 - 28381661
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  28381712 gacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 40701602 - 40701661
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  40701602 ctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 40701661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19930878 - 19930826
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  19930878 tgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 20700865 - 20700909
Alignment:
Q  9 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  20700865 acacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27864746 - 27864798
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||    
T  27864746 tgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30915505 - 30915557
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  30915505 tgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40613960 - 40613908
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  40613960 tgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 4060809 - 4060868
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||| ||||    
T  4060809 ctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcattactct 4060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 27864815 - 27864874
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 142  Q
    ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||| ||||    
T  27864815 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcattactct 27864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 9058604 - 9058658
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||    
T  9058604 ctaatgcatggggtgtacaagagtgtatgggaataaagggtatttatatatcatt 9058658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 30915587 - 30915641
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||| ||||| || |||||||||||||||    
T  30915587 ctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 30915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 33436076 - 33436022
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  33436076 ctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcatt 33436022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 38273198 - 38273148
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  38273198 acacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38882872 - 38882831
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggacccc 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  38882872 tgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 2533249 - 2533289
Alignment:
Q  85 aatgcatggggtgtacaagggtgtatgggaataaagggtgt 125  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagggtgt 2533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4060727 - 4060779
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||| |||||||    
T  4060727 tgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42257235 - 42257287
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||||||||||    
T  42257235 tgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 26891561 - 26891510
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| || |||||||||||| || |||||||||    
T  26891561 gacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 2533171 - 2533217
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||    
T  2533171 ccacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 36168960 - 36169014
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| |||||| ||||    
T  36168960 ctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacatt 36169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 42257317 - 42257366
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgta 132  Q
    |||||| |||||||||||||| |||||| | |||||||||||||||||||    
T  42257317 ctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 3440113 - 3440157
Alignment:
Q  93 gggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||    
T  3440113 gggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 3440157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17820062 - 17820010
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||| || || ||||||||||| ||||| ||||    
T  17820062 tgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38732396 - 38732444
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || ||||  |||||||||||||||    
T  38732396 tgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3440022 - 3440073
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||| ||| ||  | ||||||||||||||||||||||    
T  3440022 gacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 17823919 - 17823966
Alignment:
Q  90 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||  |||||||| |||||||||| ||||    
T  17823919 atggggtgtacaagggtgtatgtaaataaaggatgtctatgtaacatt 17823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 36168883 - 36168928
Alignment:
Q  6 cccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||||||||||| |||||||| | ||| |||||||||||||||||    
T  36168883 cccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2997545 - 2997497
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  2997545 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43490163 - 43490211
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  43490163 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 4153 - 4214
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4153 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactcttt 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 4073 - 4123
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  4073 acacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 14548046 - 14548107
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  14548046 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcttt 14548107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 34012272 - 34012203
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgtttattg 152  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||    
T  34012272 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactctttttttattg 34012203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 504179 - 504127
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  504179 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12831089 - 12831141
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12831089 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14547964 - 14548016
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14547964 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15197375 - 15197427
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15197375 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 504097 - 504043
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  504097 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 23122573 - 23122519
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23122573 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8841490 - 8841438
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8841490 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10284689 - 10284637
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10284689 tgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23122655 - 23122603
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23122655 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37038521 - 37038573
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37038521 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 42710270 - 42710210
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  42710270 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcattactctt 42710210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 12831171 - 12831225
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12831171 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5957872 - 5957924
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  5957872 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34012354 - 34012302
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  34012354 tgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40424001 - 40423949
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  40424001 tgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 44507143 - 44507095
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44507143 acacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 9122229 - 9122279
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 9122309 - 9122363
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  9122309 ctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcatt 9122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 40423919 - 40423865
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  40423919 ctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 40423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 43414557 - 43414503
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43414557 ctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacatt 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 15197459 - 15197520
Alignment:
Q  85 aatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgt 146  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||| ||||    
T  15197459 aatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcattactcgttgt 15197520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1179998 - 1179946
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  1179998 tgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 1179916 - 1179862
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||| |||||||    
T  1179916 ctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcatt 1179862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 15048234 - 15048188
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15048234 ccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10621145 - 10621093
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||    
T  10621145 tgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43414639 - 43414587
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||||||||||    
T  43414639 tgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 5957958 - 5958008
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||| ||||    
T  5957958 tgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacatt 5958008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 8841404 - 8841354
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  8841404 tgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacatt 8841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 15048157 - 15048111
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 129  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  15048157 ctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctat 15048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 37038607 - 37038657
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||    
T  37038607 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 37038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 42354560 - 42354510
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  42354560 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 42354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 44507063 - 44507010
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||||||    
T  44507063 ctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcatt 44507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 15258986 - 15258935
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||| |||||||||||| || ||||||||||||| |||||||||||    
T  15258986 gacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 42221558 - 42221609
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||  ||||||||  |||||||||    
T  42221558 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 4854839 - 4854785
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| ||||| ||||||||||| |||| |||||||| ||||||||||| ||||    
T  4854839 ctaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacatt 4854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 10284603 - 10284553
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||| ||||    
T  10284603 tgcatggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatt 10284553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 16056377 - 16056323
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  16056377 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 16056323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 24307769 - 24307715
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  24307769 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 24307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 32707979 - 32707925
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  32707979 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 32707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14055650 - 14055609
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggacccc 42  Q
    ||||| |||||||||||||| ||| |||||||||||||||||    
T  14055650 tgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 17443869 - 17443914
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 48  Q
    |||| ||||||||||||||||| ||||||| ||||||||| |||||    
T  17443869 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38229470 - 38229507
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtgga 38  Q
    |||||||||||||||||||||||| || ||||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtgga 38229507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16056459 - 16056411
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  16056459 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16383419 - 16383467
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  16383419 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 2740398 - 2740467
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt-tgtttatt 151  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  2740398 ctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcattactcttctgtttatt 2740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 33149614 - 33149545
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgtttattg 152  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||    
T  33149614 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactctttttttattg 33149545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13811694 - 13811746
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13811694 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18520942 - 18520890
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520942 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 14831938 - 14832001
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgt 146  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  14831938 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcgttgt 14832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2740316 - 2740368
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2740316 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36733000 - 36732948
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36733000 tgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42414360 - 42414308
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42414360 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31009032 - 31009082
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 35785323 - 35785377
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  35785323 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 35785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 40145455 - 40145501
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40145455 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14831856 - 14831908
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  14831856 tgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15409668 - 15409616
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15409668 tgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 18520860 - 18520800
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  18520860 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactctt 18520800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33149696 - 33149644
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33149696 tgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 36732918 - 36732872
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 129  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  36732918 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 40145531 - 40145592
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    |||||||| | ||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  40145531 ctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcattactcttt 40145592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6679740 - 6679792
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  6679740 tgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28177817 - 28177869
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  28177817 tgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35785241 - 35785293
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  35785241 tgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35943950 - 35943898
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  35943950 tgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 13811776 - 13811826
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtat 133  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  13811776 ctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgtat 13811826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 15409586 - 15409532
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  15409586 ctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacatt 15409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 31009116 - 31009166
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  31009116 tgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 31009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 31132458 - 31132512
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||| ||||||||||||||||||  |||||||||||| |||||||||||    
T  31132458 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcatt 31132512  T

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Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 16115296 - 16115247
Alignment:
Q  95 gtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 144  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcattactcttt 16115247  T

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Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 41470462 - 41470425
Alignment:
Q  13 aaaaatctgacacgtagtcacgtggaccccgcacaagc 50  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41470462 aaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

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Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 21370048 - 21370098
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||| ||||||||||||| || |||||||||||||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

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Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 35943864 - 35943814
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  35943864 tgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatt 35943814  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2252226 - 2252178
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  2252226 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3921323 - 3921275
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  3921323 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

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Target: scaffold0321 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 10085 - 10025
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 143  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  10085 ctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcattactctt 10025  T

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Target: scaffold0321; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10167 - 10115
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||| |||||||||||||||||||||||||||| || |||||||||    
T  10167 tgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

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Target: scaffold1268 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 901 - 851
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

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Target: scaffold1268; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 981 - 935
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  981 ccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold1267 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 901 - 851
Alignment:
Q  87 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 981 - 935
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  981 ccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 17097 - 17148
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 17238 - 17281
Alignment:
Q  94 ggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||    
T  17238 ggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 17281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 8832 - 8785
Alignment:
Q  90 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 137  Q
    |||||||||||||||||||||  ||||||| |||||||||||| ||||    
T  8832 atggggtgtacaagggtgtataagaataaaaggtgtctatgtaacatt 8785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8913 - 8873
Alignment:
Q  9 acacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  8913 acacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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