View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4559_low_10 (Length: 377)
Name: NF4559_low_10
Description: NF4559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4559_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 128 - 361
Target Start/End: Original strand, 2672208 - 2672442
Alignment:
| Q |
128 |
tggatcgtcgtaggc-aagacattgttggttgaaagtctttcttttctttgtctgactagacgaaccgtatactgaagatgcagtaatcgatgaatcatc |
226 |
Q |
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| T |
2672208 |
tggattgtcgtaggctaatacattgttggttgaaagtctttcttttctttgtctgactagacgaaccgtatagtgaagatgcagtaatcgatgaatcatc |
2672307 |
T |
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| Q |
227 |
catttatctgcttaaacaaaacagtaaatgtcaaaagtgataatataaataacaacattaaggctctttatggtaaatataccctatatgacagtgagat |
326 |
Q |
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|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
2672308 |
catttatctgtttagacaaaacagtaaatgtcaaaagtgataatataaataacaacattaaggctctttatggtaaatatactctatatgacagtgagat |
2672407 |
T |
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| Q |
327 |
aaggttgttatcaaacacatttcatttttatcaaa |
361 |
Q |
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|||||||||| |||||| ||||||||||||||||| |
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| T |
2672408 |
aaggttgttaccaaacagatttcatttttatcaaa |
2672442 |
T |
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