View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4559_low_25 (Length: 250)
Name: NF4559_low_25
Description: NF4559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4559_low_25 |
 | |
|
| [»] scaffold0513 (1 HSPs) |
| | |
|
| [»] scaffold0177 (1 HSPs) |
| | |
|
| [»] scaffold1407 (1 HSPs) |
| | |
|
| [»] scaffold0226 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0035 (2 HSPs) |
| | |
|
| [»] scaffold0158 (2 HSPs) |
| | |
|
| [»] scaffold0029 (2 HSPs) |
| | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0453 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0513 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0513
Description:
Target: scaffold0513; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 6081 - 6325
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
6081 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttataataataaaatacaatttagcaagcaccaacg |
6180 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6181 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaaatcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
6280 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6281 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
6325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0177 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0177
Description:
Target: scaffold0177; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 33255 - 33499
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
33255 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttataataataaaatacaatttagcaagcaccaacg |
33354 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33355 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaaatcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
33454 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33455 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
33499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18487032 - 18486788
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18487032 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
18486933 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18486932 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaaaacaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
18486833 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18486832 |
aaacaacgtaacaattaattacgatacttgacattggtctctgtg |
18486788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 18476930 - 18476693
Alignment:
| Q |
7 |
tacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgac |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18476930 |
tacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcaagttacaataataaaatacaatttagcaagcatcaacggacgac |
18476831 |
T |
|
| Q |
107 |
acgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaa |
206 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
18476830 |
acgaattatatttcgggctctcgtcatttaaaagtaattaaaaacaagttattatcccaa-tttgcaaccaaattaatctgcgtcgccttagataaacaa |
18476732 |
T |
|
| Q |
207 |
cttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18476731 |
cgtaacaattaattacggtacttgacattggtgtctgtg |
18476693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1407 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold1407
Description:
Target: scaffold1407; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 577 - 333
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
577 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgataatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
478 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
477 |
gacgacacgaattatattccggactctcgtcatttaaaagtaattaaaatcaagttattttcccatttttgcaaccaaattaattggcatcgccttagat |
378 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
377 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 15933715 - 15933958
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15933715 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
15933814 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
15933815 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaaaacaagttattttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
15933913 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15933914 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
15933958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 15942058 - 15942301
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15942058 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
15942157 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
15942158 |
gacgacacgaattatatttcgggctctcgtcatttaaaagtaattaaaaacaagttattttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
15942256 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15942257 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
15942301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 7159951 - 7160159
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| || ||||||||| || ||||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||||| |
|
|
| T |
7159951 |
ttctttttacgcgcgaaaatattatcttgttacaataataaaatgcaatttagcaagcatcaacggtcgacacaaaatatattccgggctctcgtcattt |
7160050 |
T |
|
| Q |
136 |
aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacatt |
235 |
Q |
| |
|
||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||| |
|
|
| T |
7160051 |
aaa-gtaattaaaaacaagttatttttccaattttgcaaccaaattaatttgcatcgccttagataaacaacgtgacaatagttaacggtacttgacatt |
7160149 |
T |
|
| Q |
236 |
ggtctctgtg |
245 |
Q |
| |
|
|||||||||| |
|
|
| T |
7160150 |
ggtctctgtg |
7160159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 245
Target Start/End: Complemental strand, 47921256 - 47921036
Alignment:
| Q |
24 |
cctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccggg |
123 |
Q |
| |
|
|||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| || ||| |||| | || | |||| |||||||||||||| |
|
|
| T |
47921256 |
cctttaaattaattctttttaaacgcgaaaatattgtcctgttacaataataaaatataacttaacaagtactcactgtcgacttgaattatattccggt |
47921157 |
T |
|
| Q |
124 |
ctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacg |
223 |
Q |
| |
|
|||| |||||| | || ||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||| || ||| |
|
|
| T |
47921156 |
ctcttgtcatt-agaattaatttaaaacaagttattttcccaattttacaaccaaattaattagcatcgccttagataaacaacgtgacaatagataacg |
47921058 |
T |
|
| Q |
224 |
gtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
47921057 |
gtacttgacattgatctctgtg |
47921036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 22075679 - 22075846
Alignment:
| Q |
39 |
tttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaa |
138 |
Q |
| |
|
||||||| || |||| |||| || |||||||||| ||| ||||||||||||||||||||| |||| |||||||||| |||| ||||| | ||||| |
|
|
| T |
22075679 |
tttttacgcgcgaaagtattttcctgttacaatattaagatacaatttagcaagcatcaaaaatcgacgcgaattatatcccggtctctcaac-gttaaa |
22075777 |
T |
|
| Q |
139 |
agtaattaaactc-aagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaa |
206 |
Q |
| |
|
| |||||||| | ||||||||||| |||||||||||| ||| ||||| | ||||| |||||||||||| |
|
|
| T |
22075778 |
attaattaaaaacaaagttattttctcaattttgcaacaaaactaattaggatcgcattagataaacaa |
22075846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 3845076 - 3844936
Alignment:
| Q |
64 |
gttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcc |
163 |
Q |
| |
|
|||| |||||||||||| || ||| |||| || | || | ||||||||||||||| || | |||||||| |||||||||||| ||||||| ||||| |
|
|
| T |
3845076 |
gttataataataaaatataacttaacaagtatacatggtccacacgaattatattctggtatgtcgtcatt--aaagtaattaaaaacaagttaatttcc |
3844979 |
T |
|
| Q |
164 |
caattttgcaaccaaattaatttgcatcgccttagataaacaa |
206 |
Q |
| |
|
|||||||||| |||| ||||| ||| |||||||||||||||| |
|
|
| T |
3844978 |
taattttgcaatcaaactaattagcaccgccttagataaacaa |
3844936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0226 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0226
Description:
Target: scaffold0226; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 4625 - 4869
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4625 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
4724 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4725 |
gacgacacgaattatattacaggctctcgtcatttaaaagtaattaaaaacaagttattttcccaattttgcaaccaaattaatttgcaccgccttagat |
4824 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4825 |
aaacaacgtaacaattaattacgatacttgacattggtctctgtg |
4869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 187180 - 187423
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
187180 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgcaaaaatattgtcatgttacaataataaaatacaatttaacaagcatcaacg |
187279 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
187280 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaaagcaagttattttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
187378 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
187379 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
187423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 87081 - 86838
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
87081 |
cggacgtacgaaagtcgacggtgcctttagatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
86982 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
86981 |
gacgacacaaattatattccgtgctctcgtcatttaaaagtaattaaaaacaagttattttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
86883 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
86882 |
aaacaacgtaacaattaattacggtacttgacattggtctatgtg |
86838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 96775 - 96532
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
96775 |
cggacgtacgaaagtcgacggtgcctttagatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
96676 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
96675 |
gacgacacaaattatattccgagctctcgtcatttaaaagtaattaaaaacaagttattttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
96577 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
96576 |
aaacaacgtaacaattaattatggtacttgacactggtctctgtg |
96532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14224537 - 14224780
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14224537 |
cggacgtacgaaagtcgacggtgcctttaaatttgcaatatttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
14224636 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
14224637 |
gacgatacgaattatattccgggctctcgtcattcaaaagtaattaaaaacaagttaatttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
14224735 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14224736 |
aaacaacgtaacaattaattacgatacttgacattggtctctgtg |
14224780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14234632 - 14234875
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14234632 |
cggacgtacgaaagtcgacggtgcctttaaatttgcaatatttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
14234731 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
14234732 |
gacgatacgaattatattccgggctctcgtcattcaaaagtaattaaaaacaagttaatttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
14234830 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14234831 |
aaacaacgtaacaattaattacgatacttgacattggtctctgtg |
14234875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 39372514 - 39372758
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaa-taataaaatacaatttagcaagcatcaac |
99 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||| || ||| |||| | || |
|
|
| T |
39372514 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgcgaaaatattgtcctgttgcaaataataaaatataacttaacaagtactcac |
39372613 |
T |
|
| Q |
100 |
ggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttaga |
199 |
Q |
| |
|
|| |||| ||||||||||||| |||| |||||| | | ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39372614 |
ggtcgacgtaaattatattccggtctcttgtcatt-agtattaatttaaagcaacttattttcccaattttgcaaccaaattaatttgcatcgccttaga |
39372712 |
T |
|
| Q |
200 |
taaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39372713 |
taaacaacgtaacaattaattacggtacttgacattggtctctgtg |
39372758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 11165342 - 11165552
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
||||| |||| || ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11165342 |
ttcttcttacgcgcgaaaatattatcctgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattacattccgggctctcgtcattt |
11165441 |
T |
|
| Q |
136 |
-aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacat |
234 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||||||| ||| | | || | ||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
11165442 |
aaaaattaattaaaaacaagttatttttccaattttgcacccatgtcatttacaaacgccttagataaacaacgtaacaattaactacggtacttgacat |
11165541 |
T |
|
| Q |
235 |
tggtctctgtg |
245 |
Q |
| |
|
||||||||||| |
|
|
| T |
11165542 |
tggtctctgtg |
11165552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 240
Target Start/End: Original strand, 25157403 - 25157585
Alignment:
| Q |
51 |
aaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaact |
150 |
Q |
| |
|
|||||||| || |||||||||||||||||| || ||| |||| | |||| |||| ||||||||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
25157403 |
aaaatattttcctgttacaataataaaatataacttaacaagtactcacggtcgacgcgaattatattccggtctcttgtc-tttaaaagtaattaaaaa |
25157501 |
T |
|
| Q |
151 |
caagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacattggtct |
240 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||| ||| |||||||||||||||| |
|
|
| T |
25157502 |
caagttattttcccaattttgcaaccaaa------agcatcgccttagataaacaacatgacaataaataacgatacttgacattggtct |
25157585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 50878962 - 50878827
Alignment:
| Q |
50 |
gaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaac |
149 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||| |||| |||||||||| |||| ||||||||||| ||||||||||||| ||||| || |||| |
|
|
| T |
50878962 |
gaaaatattttcatgttataataataaaatacaatgtagctagcatcaacgatcgacgtgaattatattcgaggctctcgtcattaaaaagaaactaaaa |
50878863 |
T |
|
| Q |
150 |
tcaagttattttcccaattttgcaaccaaattaatt |
185 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
50878862 |
acaagttatttttccatttttgcaaccaaattaatt |
50878827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 207
Target Start/End: Complemental strand, 50884117 - 50883960
Alignment:
| Q |
50 |
gaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaac |
149 |
Q |
| |
|
|||| |||| || ||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||||||| | | ||||| |
|
|
| T |
50884117 |
gaaagtattttcctgttataataataaaatacaatttagctagcatcaacgatcgacgtgaattatattccatgctctcgtcattaatttttttttaaaa |
50884018 |
T |
|
| Q |
150 |
tcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaac |
207 |
Q |
| |
|
|||||| |||| || ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
50884017 |
acaagttgttttttcatttttgcaaccaaattaattagcatcgccttagataaacaac |
50883960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 35975950 - 35976046
Alignment:
| Q |
108 |
cgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaaca |
205 |
Q |
| |
|
|||||||||||| || |||||||| | ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35975950 |
cgaattatattctggtctctcgtcctc-aaaagtaattaaaaacaacttatgttcccaattttgcaaccaaattaattagcatcgccttagataaaca |
35976046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 16636949 - 16637017
Alignment:
| Q |
177 |
aaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||| ||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||| |
|
|
| T |
16636949 |
aaattaattagcatcgccttagataaacaacgtgacaatagataacggtacttgacattggtctctgtg |
16637017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 16636849 - 16636947
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatt |
134 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| ||||||||||||| || ||| |||| | | || |||| |||||||||||| || |||| |||||| |
|
|
| T |
16636849 |
ttctttttacgcgtgaaaatattgtcttgttgcaataataaaatataacttaacaagtactcagggtcgacgcgaattatattctggtctcttgtcatt |
16636947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 27079162 - 27078999
Alignment:
| Q |
38 |
ctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaa |
137 |
Q |
| |
|
|||||||| || || |||||| || ||||| |||||||||||| || ||| | || | | || |||| |||||||||||||| |||| |||||| || |
|
|
| T |
27079162 |
ctttttacgcgcgagaatattttcttgttataataataaaatataacttaactagtactcatggtcgacgcgaattatattccgatctcttgtcatt-aa |
27079064 |
T |
|
| Q |
138 |
aagtaattaaactcaa-gttattttcccaattttgcaaccaaattaatttgcatcgccttagataaa |
203 |
Q |
| |
|
|| |||||||| ||| |||||||||||||||||||||| ||| || || |||| ||||||||||| |
|
|
| T |
27079063 |
aactaattaaaaacaaagttattttcccaattttgcaactaaactatttagcat--ccttagataaa |
27078999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 28387092 - 28387335
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28387092 |
cggacgtacgaaagtcgacagtgcctttaaatttgaaatatttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
28387191 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
28387192 |
gacgatacaaattatattccgggctctcgtcatttaaaagtaattaaaaacaagttaatttcccaa-tttgcaaccaaattaatctgcatcgccttagat |
28387290 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28387291 |
aaacaacgtaacaattaattacgatacttgacattggtctctgtg |
28387335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0158
Description:
Target: scaffold0158; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 24 - 245
Target Start/End: Complemental strand, 28122 - 27900
Alignment:
| Q |
24 |
cctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccggg |
123 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28122 |
cctttaaattaattctttttacacgcgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatatttcggg |
28023 |
T |
|
| Q |
124 |
ctctcgtcatttaaaagtaattaaactcaagttattttcccaa-ttttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattac |
222 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| || ||||||| ||| || | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
28022 |
ctctcgtcatttaaaagtaattaaaaacaagttattttcctaatttttgcacccatatcatttacaaacgccttagataaacaacttaacaattaattac |
27923 |
T |
|
| Q |
223 |
ggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
27922 |
ggtacttgacattggtctctgtg |
27900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 35525 - 35306
Alignment:
| Q |
24 |
cctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccggg |
123 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| |
|
|
| T |
35525 |
cctttaaattaattctttttacacgcgaaaatattgtcttgttacaataataaaatacaatttagcaagtatcaacggacaacacgaattatatttcggg |
35426 |
T |
|
| Q |
124 |
ctctcgtcatttaaaagtaattaaactcaagttattttcccaatttt-gcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattac |
222 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| ||| ||| || | || | |||||| |||||||||| |||||||||||||| |
|
|
| T |
35425 |
ctctcgtcatttaaaagtaattaaaaacaagttattttcccaatttttgcacccatatcatttacaaacgcctttgataaacaacgtaacaattaattac |
35326 |
T |
|
| Q |
223 |
ggtacttgacattggtctct |
242 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
35325 |
tgtacttgacattggtctct |
35306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 75890 - 75681
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
75890 |
ttctttttacgtgcgaaaatattatcctgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattacattccgggctctcgtcattt |
75791 |
T |
|
| Q |
136 |
-aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacat |
234 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
75790 |
aaaaagtaattaaaaacaagttattttcccaa-tttgcaacaaaattaatctgcatcgccttagataaacaacgtaacaattaattacggtacttgacat |
75692 |
T |
|
| Q |
235 |
tggtctctgtg |
245 |
Q |
| |
|
||||||||||| |
|
|
| T |
75691 |
tggtctctgtg |
75681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 87615 - 87406
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| || ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
87615 |
ttctttttacgcgcgaaaatattatcctgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattacattccgggctctcgtcattt |
87516 |
T |
|
| Q |
136 |
-aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacat |
234 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
87515 |
aaaaagtaattaaaaacaagttattttcccaa-tttgcaacgaaattaatctgcatcgcctttgataaacaacgtaacaattaattacggtacttgacat |
87417 |
T |
|
| Q |
235 |
tggtctctgtg |
245 |
Q |
| |
|
||||||||||| |
|
|
| T |
87416 |
tggtctctgtg |
87406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 38035 - 37827
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| || ||||||||| || ||||||||||||||||| |||||||| |||||||||||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
38035 |
ttctttttacgcgcgaaaatattatcctgttacaataataaaatgcaatttagtaagcatcaacggtcgacacaaattatatttcgggctctcgtcattt |
37936 |
T |
|
| Q |
136 |
aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacatt |
235 |
Q |
| |
|
||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37935 |
aaa-gtaattaaaaacaagttattttcccaattttgcaaccaaattaatctgcatcgccttagataaacaacgtaacaattaattacggtacttgacatt |
37837 |
T |
|
| Q |
236 |
ggtctctgtg |
245 |
Q |
| |
|
|||||||||| |
|
|
| T |
37836 |
ggtctctgtg |
37827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 20928957 - 20929200
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| |||| | ||| |
|
|
| T |
20928957 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgcgaaaatattgtcatgttacaataataaaatataacttaacaagtactcacg |
20929056 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
| |||| |||||||||||||| |||| |||||| | | ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20929057 |
gtcgacgtgaattatattccggtctcttgtcatt-agtattaatttaaagcaagttattttcccaattttgcaaccaagttaatttgcatcgccttagat |
20929155 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20929156 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
20929200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 20933314 - 20933071
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| || ||| |||| | ||| |
|
|
| T |
20933314 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgcgaaaatattgtcctgttacaataataaaatataacttaacaagtactcacg |
20933215 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
| |||| |||||||||||||| |||| |||||| | | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20933214 |
gtcgacgtgaattatattccggtctcttgtcatt-agtattaatttaaagcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
20933116 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20933115 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
20933071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 65 - 245
Target Start/End: Original strand, 19185635 - 19185814
Alignment:
| Q |
65 |
ttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttccc |
164 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| || |||||| |||| ||| || |||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
19185635 |
ttacaataataaaatgcaatttagcaagcatcaatggtcgacacaaattgcattacgcgctctcgtcatttaaa-gtaattaaaaacaagttattttccc |
19185733 |
T |
|
| Q |
165 |
aattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||| | ||||| || || |||||||||||||||||||||| |
|
|
| T |
19185734 |
aattttgcaaccaaaataatttgtttcgccttagataaacaacgtgacaatagataacagtacttgacattggtctctgtg |
19185814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 34658298 - 34658517
Alignment:
| Q |
24 |
cctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccggg |
123 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||| |||||||||||||||||| || ||| |||| | |||| | || |||||||||||||| |
|
|
| T |
34658298 |
cctttaaattaattctttttacgcgcaaaaatattgtcctgttacaataataaaatataacttaacaagtactcacggtcaacgtgaattatattccggt |
34658397 |
T |
|
| Q |
124 |
ctctcgtcatttaaaagtaat-taaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattac |
222 |
Q |
| |
|
|||| |||||| | || |||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| || || |
|
|
| T |
34658398 |
ctcttgtcatt-agaattaatctaaaa--aagttattttcccaattttgtagccaaattaatttgcatcgccttagataaacaacgtgacaatagataac |
34658494 |
T |
|
| Q |
223 |
ggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
34658495 |
ggtacttgacattggtctctgtg |
34658517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 19184559 - 19184596
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataa |
73 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
19184559 |
ttctttttacacgcgaaaatattgtcttgttacaataa |
19184596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 19900845 - 19900602
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacg |
100 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| || ||| |||| | ||| |
|
|
| T |
19900845 |
cggacgtacgaaagtcgatggtgcctttaaatttgttctttttacacgcgaaaatattgtcctgttacaataataaaatataacttaacaagtactcacg |
19900746 |
T |
|
| Q |
101 |
gacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
200 |
Q |
| |
|
| |||| |||||||||||||| |||| |||||| | | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19900745 |
gtcgacgtgaattatattccggtctcttgtcatt-agtattaatttaaagcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagat |
19900647 |
T |
|
| Q |
201 |
aaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19900646 |
aaacaacgtaacaattaattacggtacttgacattggtctctgtg |
19900602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 139; Significance: 8e-73; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 11176636 - 11176427
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
11176636 |
ttctttttacgctcgaaaatattatcctgttacaataataaaatacaatttagcaagcatcaacggacgacacaaattacattccggactctcgtcattt |
11176537 |
T |
|
| Q |
136 |
-aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacat |
234 |
Q |
| |
|
||||||||||||| |||||||||||| ||| ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11176536 |
aaaaagtaattaaaaacaagttattttctcaa-tttgcaaccaaattaatctgcgtcgccttagataaacaacgtaacaattaattacggtacttgacat |
11176438 |
T |
|
| Q |
235 |
tggtctctgtg |
245 |
Q |
| |
|
||||||||||| |
|
|
| T |
11176437 |
tggtctctgtg |
11176427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 11295956 - 11295786
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| || |||||| ||||| ||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
11295956 |
ttctttttacgcgcgaaaatgttgtccagttacaacaataaaatgcaatttagcaagcatcaacggtcgacataaattatattccgggctctcgtcattt |
11295857 |
T |
|
| Q |
136 |
aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaac |
207 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11295856 |
-aaagtaattaaaaacaaattattttcccaattttgcaaccaaattaatttacatcgccttagataaacaac |
11295786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 23047796 - 23047991
Alignment:
| Q |
50 |
gaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagt-aattaaa |
148 |
Q |
| |
|
|||||||||||| ||||||||| || ||||| || ||| |||| || || | ||| |||||||||||||| |||| ||| || |||| | ||||| | |
|
|
| T |
23047796 |
gaaaatattgtc-tgttacaattattaaatataacttaacaagtattcaccgttgacgcgaattatattccgacctcttgtctttaaaaaattaattaga |
23047894 |
T |
|
| Q |
149 |
ctcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| || ||| |||||||||||||||| |||| |
|
|
| T |
23047895 |
aacaagttattttcccaattttgcaaccaaattaattagcatcgccttagataaacaacgtgacaatagataacgatacttgacattggtctttgtg |
23047991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 245
Target Start/End: Complemental strand, 3791366 - 3791173
Alignment:
| Q |
50 |
gaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaac |
149 |
Q |
| |
|
||||||||| || ||||| |||||||| ||| || ||| ||| || ||| |||||||||||||||||||| ||||||||| ||||| |||||| | |
|
|
| T |
3791366 |
gaaaatattttcttgttataataataagatataacttaagaagtattcacgatcgacacgaattatattccggtctctcgtca--taaaaataattagaa |
3791269 |
T |
|
| Q |
150 |
tcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||| ||||| ||||| ||| |||| ||||| ||||| |||||||||||||| | ||||| || | ||||||||||||||||||||||| |
|
|
| T |
3791268 |
acaagttaatttcctaatttcacaatcaaactaattagcatcaccttagataaacaatgtgacaatagataatggtacttgacattggtctctgtg |
3791173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 3829091 - 3828990
Alignment:
| Q |
103 |
cgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataa |
202 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| |||||| | ||||||| ||||| ||||| ||| |||| ||||| ||||| |||||||||| |
|
|
| T |
3829091 |
cgacacgaattatattccggtctctcgtca--taaaaataattagaaacaagttaatttcctaatttcacaatcaaactaattagcatcaccttagataa |
3828994 |
T |
|
| Q |
203 |
acaa |
206 |
Q |
| |
|
|||| |
|
|
| T |
3828993 |
acaa |
3828990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 3780057 - 3780212
Alignment:
| Q |
50 |
gaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaac |
149 |
Q |
| |
|
||||||||| || |||||||||||||||||| || ||| |||| || || |||||| |||||||||| | |||| |||| ||||| |||||||| |
|
|
| T |
3780057 |
gaaaatattttcctgttacaataataaaatataacttaacaagtattcgcgatcgacacaaattatattcttgtctcttgtca--taaaaataattaaaa |
3780154 |
T |
|
| Q |
150 |
tcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaac |
207 |
Q |
| |
|
||||||| ||| | ||||| |||| |||| ||||| ||| ||||||||||||||| |
|
|
| T |
3780155 |
acaagttaattttctaatttcgcaatcaaactaattagcactaccttagataaacaac |
3780212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 117077 - 117321
Alignment:
| Q |
1 |
cggacttacgaaagtcgacggtgcctttaaatttgttctttttacacgtgaaaatattgtcatgttacaa-taataaaatacaatttagcaagcatcaac |
99 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| || ||| |||| | || |
|
|
| T |
117077 |
cggacgtacgaaagtcgacggtgcctttaaatttgttctttttacacgcgaaaatattgtcctgttacaaataataaaatataacttaacaagtactcac |
117176 |
T |
|
| Q |
100 |
ggacgacacgaattatattccgggctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttaga |
199 |
Q |
| |
|
| |||| |||||||||||||| |||| |||||| | | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
117177 |
gatcgacgtgaattatattccggtctcttgtcatt-agtattaatttaaagcaagttattttcccaattttgcaaccaaattaatttgcatcgccttaga |
117275 |
T |
|
| Q |
200 |
taaacaacttaacaattaattacggtacttgacattggtctctgtg |
245 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
117276 |
taaacaacgtaacaattaattacggtacttgacattggtctctgtg |
117321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0453 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0453
Description:
Target: scaffold0453; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 12783 - 12992
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
12783 |
ttctttttactcgcgaaaatatcatcctgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattacattctaggctttcgtcattt |
12882 |
T |
|
| Q |
136 |
-aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacat |
234 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12883 |
aaaaagtaattaaaaacaagttattttcccaa-tttgcaaccaaattaatctgcgtcgccttagataaacaacataacaattaattacggtacttgacat |
12981 |
T |
|
| Q |
235 |
tggtctctgtg |
245 |
Q |
| |
|
|||||| |||| |
|
|
| T |
12982 |
tggtctatgtg |
12992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 7845826 - 7846034
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||| ||| || ||| |||||| || | || ||| ||||||||| |||||||||||||||| |
|
|
| T |
7845826 |
ttctttttacgcgtgaaaatattgtcctgttacaataataatatataacttaacaagcactcacagtcggcacaaattatatttcgggctctcgtcattt |
7845925 |
T |
|
| Q |
136 |
aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacatt |
235 |
Q |
| |
|
||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||| || |
|
|
| T |
7845926 |
aaa-gtaattaaaaacaagttattttccaaattttgcaaccaaattaatttgcatcgccttagataaacaatgtgacaatatataacggtacttgacgtt |
7846024 |
T |
|
| Q |
236 |
ggtctctgtg |
245 |
Q |
| |
|
|||||||||| |
|
|
| T |
7846025 |
ggtctctgtg |
7846034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 7839842 - 7840050
Alignment:
| Q |
36 |
ttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccgggctctcgtcattt |
135 |
Q |
| |
|
|||||||||| | |||||||||||| |||||||||||||||||| || ||| |||||| | || ||||| ||||||||||||| |||||||||||| |
|
|
| T |
7839842 |
ttctttttacgtgcgaaaatattgtcctgttacaataataaaatataacttaacaagcactcatggttgacacaaattatattccggactctcgtcattt |
7839941 |
T |
|
| Q |
136 |
aaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacggtacttgacatt |
235 |
Q |
| |
|
||| ||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||| || | | ||| || |||||||||||| || |
|
|
| T |
7839942 |
aaa-gtaattaaaaacaagttatttttcaaattttgcaaccaaattaatttgtatcgccttagataaacgacgtgataatagataacggtacttgacgtt |
7840040 |
T |
|
| Q |
236 |
ggtctctgtg |
245 |
Q |
| |
|
|||| ||||| |
|
|
| T |
7840041 |
ggtccctgtg |
7840050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 7960739 - 7960959
Alignment:
| Q |
24 |
cctttaaatttgttctttttacacgtgaaaatattgtcatgttacaataataaaatacaatttagcaagcatcaacggacgacacgaattatattccggg |
123 |
Q |
| |
|
|||||||||| |||||||||| || |||||||||||| |||| |||| ||||||| || ||| |||| | | || |||| |||||||||||||| |
|
|
| T |
7960739 |
cctttaaattaattctttttacgcgcgaaaatattgtcccgttagaatattaaaatataacttaacaagtacttatggtcgacgggaattatattccggt |
7960838 |
T |
|
| Q |
124 |
ctctcgtcatttaaaagtaattaaactcaagttattttcccaattttgcaaccaaattaatttgcatcgccttagataaacaacttaacaattaattacg |
223 |
Q |
| |
|
|||| |||||| | || ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| || ||| |
|
|
| T |
7960839 |
ctcttgtcatt-agaattaatttaaaacaagttattttcccaattttgcaaccaaactaatttgcatcgccttagataaacaacgtgacaatagataacg |
7960937 |
T |
|
| Q |
224 |
gtacttgacattggtctctgtg |
245 |
Q |
| |
|
||||||||||||| ||| |||| |
|
|
| T |
7960938 |
gtacttgacattgatctatgtg |
7960959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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