View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4559_low_35 (Length: 208)

Name: NF4559_low_35
Description: NF4559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4559_low_35
NF4559_low_35
[»] chr8 (48 HSPs)
chr8 (1-53)||(504127-504179)
chr8 (1-53)||(12831089-12831141)
chr8 (1-53)||(14547964-14548016)
chr8 (1-53)||(15197375-15197427)
chr8 (1-53)||(8841438-8841490)
chr8 (1-53)||(10284637-10284689)
chr8 (1-53)||(23122603-23122655)
chr8 (1-53)||(37038521-37038573)
chr8 (83-136)||(504044-504097)
chr8 (83-136)||(14548046-14548099)
chr8 (83-136)||(23122520-23122573)
chr8 (1-53)||(5957872-5957924)
chr8 (1-53)||(34012302-34012354)
chr8 (1-53)||(40423949-40424001)
chr8 (3-51)||(44507095-44507143)
chr8 (3-53)||(9122229-9122279)
chr8 (83-136)||(12831171-12831224)
chr8 (83-136)||(34012219-34012272)
chr8 (83-136)||(42710217-42710270)
chr8 (83-132)||(43414508-43414557)
chr8 (1-53)||(1179946-1179998)
chr8 (7-53)||(15048188-15048234)
chr8 (83-136)||(9122309-9122362)
chr8 (87-132)||(37038607-37038652)
chr8 (83-136)||(40423866-40423919)
chr8 (1-53)||(10621093-10621145)
chr8 (1-53)||(43414587-43414639)
chr8 (85-136)||(15197459-15197510)
chr8 (83-136)||(1179863-1179916)
chr8 (83-132)||(16056328-16056377)
chr8 (83-132)||(24307720-24307769)
chr8 (83-132)||(32707930-32707979)
chr8 (2-53)||(15258935-15258986)
chr8 (2-53)||(42221558-42221609)
chr8 (83-129)||(15048111-15048157)
chr8 (90-132)||(34307347-34307389)
chr8 (87-132)||(5957958-5958003)
chr8 (87-132)||(8841359-8841404)
chr8 (1-42)||(14055609-14055650)
chr8 (3-48)||(17443869-17443914)
chr8 (83-132)||(30479401-30479450)
chr8 (83-132)||(32032848-32032897)
chr8 (1-38)||(38229470-38229507)
chr8 (87-132)||(42354515-42354560)
chr8 (83-136)||(44507011-44507063)
chr8 (96-132)||(15258856-15258892)
chr8 (1-49)||(16056411-16056459)
chr8 (1-49)||(16383419-16383467)
[»] chr7 (54 HSPs)
chr7 (1-53)||(7389431-7389483)
chr7 (1-53)||(38267082-38267134)
chr7 (83-136)||(19329966-19330019)
chr7 (83-136)||(38837341-38837394)
chr7 (1-53)||(3784037-3784089)
chr7 (1-53)||(19329884-19329936)
chr7 (1-53)||(36361919-36361971)
chr7 (1-53)||(36362068-36362120)
chr7 (3-53)||(38837261-38837311)
chr7 (83-136)||(3434676-3434729)
chr7 (87-136)||(8080306-8080355)
chr7 (83-136)||(40957831-40957884)
chr7 (1-53)||(3434604-3434656)
chr7 (1-53)||(4999520-4999572)
chr7 (1-53)||(8080389-8080441)
chr7 (1-53)||(19436193-19436245)
chr7 (1-53)||(35137575-35137627)
chr7 (3-53)||(3694411-3694461)
chr7 (7-53)||(32951499-32951545)
chr7 (83-136)||(4999437-4999490)
chr7 (5-53)||(40957753-40957801)
chr7 (140-191)||(26042297-26042348)
chr7 (3-53)||(46374808-46374858)
chr7 (83-132)||(2318168-2318217)
chr7 (83-136)||(11044302-11044355)
chr7 (83-132)||(19436114-19436163)
chr7 (83-136)||(32951416-32951469)
chr7 (83-136)||(36362138-36362191)
chr7 (83-132)||(46374751-46374800)
chr7 (1-49)||(8238255-8238303)
chr7 (1-53)||(36208215-36208267)
chr7 (83-136)||(7389513-7389565)
chr7 (83-132)||(35523000-35523049)
chr7 (83-136)||(36361848-36361901)
chr7 (83-132)||(38044321-38044370)
chr7 (83-132)||(46033728-46033777)
chr7 (96-132)||(12311041-12311077)
chr7 (1-53)||(16374830-16374882)
chr7 (1-53)||(21234443-21234495)
chr7 (19-49)||(11044238-11044268)
chr7 (83-129)||(31736001-31736047)
chr7 (3-53)||(35522920-35522970)
chr7 (90-132)||(41915872-41915914)
chr7 (83-132)||(8238337-8238386)
chr7 (83-132)||(16374751-16374800)
chr7 (83-132)||(21234525-21234574)
chr7 (83-132)||(22343485-22343534)
chr7 (83-136)||(38267164-38267217)
chr7 (87-132)||(41423810-41423855)
chr7 (1-41)||(2318261-2318301)
chr7 (84-128)||(26296769-26296813)
chr7 (1-49)||(38044239-38044287)
chr7 (96-132)||(39255851-39255887)
chr7 (3-51)||(46033809-46033857)
[»] chr6 (29 HSPs)
chr6 (1-53)||(32869720-32869772)
chr6 (83-136)||(17598678-17598731)
chr6 (1-53)||(11427660-11427712)
chr6 (1-53)||(17598596-17598648)
chr6 (1-53)||(22880664-22880716)
chr6 (83-136)||(11427742-11427795)
chr6 (83-136)||(29857951-29858004)
chr6 (83-136)||(32869802-32869855)
chr6 (1-53)||(23128133-23128185)
chr6 (83-136)||(15832701-15832754)
chr6 (1-53)||(6209471-6209523)
chr6 (3-53)||(29857871-29857921)
chr6 (3-53)||(31976292-31976342)
chr6 (83-136)||(22880581-22880634)
chr6 (83-132)||(31110688-31110737)
chr6 (1-45)||(31109414-31109458)
chr6 (1-48)||(15832619-15832666)
chr6 (83-136)||(23128049-23128103)
chr6 (83-132)||(4231672-4231721)
chr6 (1-53)||(28536494-28536544)
chr6 (83-132)||(31976372-31976421)
chr6 (90-132)||(15989969-15990011)
chr6 (90-132)||(30341287-30341329)
chr6 (4-49)||(4231593-4231638)
chr6 (87-132)||(28536415-28536460)
chr6 (1-49)||(15508034-15508082)
chr6 (1-49)||(15990052-15990100)
chr6 (1-49)||(30341370-30341418)
chr6 (93-129)||(30870148-30870184)
[»] chr5 (35 HSPs)
chr5 (1-53)||(13811694-13811746)
chr5 (1-53)||(18520890-18520942)
chr5 (83-136)||(35785323-35785376)
chr5 (1-53)||(2740316-2740368)
chr5 (1-53)||(36732948-36733000)
chr5 (1-53)||(42414308-42414360)
chr5 (3-53)||(31009032-31009082)
chr5 (7-53)||(40145455-40145501)
chr5 (83-136)||(2740398-2740451)
chr5 (83-136)||(14831938-14831991)
chr5 (83-136)||(18520807-18520860)
chr5 (1-53)||(14831856-14831908)
chr5 (1-53)||(15409616-15409668)
chr5 (1-53)||(33149644-33149696)
chr5 (83-136)||(31132458-31132511)
chr5 (83-136)||(33149561-33149614)
chr5 (1-53)||(6679740-6679792)
chr5 (1-53)||(28177817-28177869)
chr5 (7-51)||(31132392-31132436)
chr5 (1-53)||(35785241-35785293)
chr5 (1-53)||(35943898-35943950)
chr5 (83-129)||(36732872-36732918)
chr5 (87-132)||(35943819-35943864)
chr5 (13-50)||(41470425-41470462)
chr5 (83-133)||(13811776-13811826)
chr5 (3-53)||(21370048-21370098)
chr5 (83-132)||(15409537-15409586)
chr5 (87-132)||(31009116-31009161)
chr5 (83-136)||(40145531-40145584)
chr5 (90-132)||(2252095-2252137)
chr5 (90-132)||(3921192-3921234)
chr5 (95-136)||(16115255-16115296)
chr5 (1-49)||(2252178-2252226)
chr5 (1-49)||(3921275-3921323)
chr5 (144-184)||(40753051-40753091)
[»] chr4 (43 HSPs)
chr4 (1-53)||(48183055-48183107)
chr4 (1-53)||(50052434-50052486)
chr4 (3-53)||(42044373-42044423)
chr4 (83-136)||(41236471-41236524)
chr4 (83-136)||(42044290-42044343)
chr4 (1-53)||(480453-480505)
chr4 (1-53)||(11511468-11511520)
chr4 (1-53)||(41236389-41236441)
chr4 (1-53)||(54473539-54473591)
chr4 (3-53)||(41823926-41823976)
chr4 (1-53)||(3481696-3481748)
chr4 (1-53)||(6034086-6034138)
chr4 (84-136)||(24995030-24995082)
chr4 (1-53)||(24995113-24995165)
chr4 (84-136)||(48182972-48183024)
chr4 (10-53)||(29234251-29234294)
chr4 (83-136)||(6034168-6034221)
chr4 (1-53)||(23608277-23608329)
chr4 (1-53)||(29239928-29239980)
chr4 (1-53)||(31910234-31910286)
chr4 (1-52)||(50526178-50526229)
chr4 (3-53)||(29977929-29977979)
chr4 (94-136)||(53352497-53352539)
chr4 (87-132)||(29240014-29240059)
chr4 (87-132)||(50526098-50526143)
chr4 (84-136)||(11511386-11511437)
chr4 (3-51)||(53352574-53352622)
chr4 (3-53)||(48647732-48647782)
chr4 (83-124)||(480382-480423)
chr4 (83-132)||(19670643-19670692)
chr4 (83-136)||(23608359-23608412)
chr4 (83-132)||(29547886-29547935)
chr4 (83-136)||(54473456-54473509)
chr4 (83-132)||(55475315-55475364)
chr4 (3-53)||(28480274-28480324)
chr4 (3-53)||(28481149-28481199)
chr4 (3-53)||(28482024-28482074)
chr4 (94-132)||(30036994-30037032)
chr4 (94-132)||(50052355-50052393)
chr4 (83-132)||(31910316-31910365)
chr4 (83-132)||(41824006-41824055)
chr4 (1-49)||(17983753-17983801)
chr4 (1-49)||(50813902-50813950)
[»] chr3 (47 HSPs)
chr3 (1-53)||(33644242-33644294)
chr3 (1-53)||(53982053-53982105)
chr3 (1-53)||(8076435-8076487)
chr3 (1-53)||(27714897-27714949)
chr3 (1-53)||(31456731-31456783)
chr3 (1-53)||(52629342-52629394)
chr3 (3-53)||(17470449-17470499)
chr3 (83-136)||(33644324-33644377)
chr3 (83-136)||(52629424-52629477)
chr3 (83-136)||(53982135-53982188)
chr3 (83-136)||(54868818-54868871)
chr3 (1-53)||(49607456-49607508)
chr3 (1-53)||(54868901-54868953)
chr3 (83-136)||(11095290-11095343)
chr3 (83-132)||(26141457-26141506)
chr3 (83-136)||(31456813-31456866)
chr3 (87-128)||(33118781-33118822)
chr3 (83-136)||(48587024-48587077)
chr3 (83-136)||(49607538-49607591)
chr3 (3-53)||(26141538-26141588)
chr3 (83-132)||(11347849-11347898)
chr3 (83-132)||(41189691-41189740)
chr3 (83-132)||(51419287-51419336)
chr3 (1-49)||(48587101-48587149)
chr3 (2-53)||(26754738-26754789)
chr3 (1-35)||(11095377-11095411)
chr3 (3-53)||(20764921-20764971)
chr3 (3-53)||(51419366-51419416)
chr3 (83-136)||(9563123-9563176)
chr3 (83-132)||(20764842-20764891)
chr3 (1-38)||(33118872-33118909)
chr3 (83-136)||(36707351-36707404)
chr3 (1-53)||(41189770-41189822)
chr3 (93-132)||(26754829-26754868)
chr3 (89-132)||(30801660-30801703)
chr3 (1-44)||(36707439-36707482)
chr3 (93-132)||(48375633-48375672)
chr3 (3-53)||(11907415-11907465)
chr3 (87-132)||(35536754-35536799)
chr3 (83-132)||(42823235-42823284)
chr3 (83-132)||(45058480-45058529)
chr3 (13-53)||(9563053-9563093)
chr3 (1-53)||(11347928-11347980)
chr3 (1-53)||(13898061-13898113)
chr3 (5-53)||(30801739-30801787)
chr3 (84-132)||(35965709-35965757)
chr3 (1-49)||(36331339-36331387)
[»] chr2 (54 HSPs)
chr2 (1-53)||(10249388-10249440)
chr2 (1-53)||(13438385-13438437)
chr2 (1-53)||(28863497-28863549)
chr2 (1-53)||(32505654-32505706)
chr2 (1-53)||(7465741-7465793)
chr2 (1-53)||(9058522-9058574)
chr2 (1-53)||(17473062-17473114)
chr2 (1-53)||(33436106-33436158)
chr2 (83-136)||(5574423-5574476)
chr2 (83-136)||(7465658-7465711)
chr2 (83-136)||(10249305-10249358)
chr2 (83-136)||(13438467-13438520)
chr2 (83-136)||(17473144-17473197)
chr2 (83-136)||(28863579-28863632)
chr2 (83-136)||(40701602-40701655)
chr2 (1-53)||(5574494-5574546)
chr2 (1-53)||(40701520-40701572)
chr2 (2-53)||(28381661-28381712)
chr2 (83-136)||(4060809-4060862)
chr2 (83-136)||(19930743-19930796)
chr2 (87-132)||(20700943-20700988)
chr2 (83-136)||(30915587-30915640)
chr2 (83-136)||(38882734-38882787)
chr2 (1-53)||(19930826-19930878)
chr2 (9-53)||(20700865-20700909)
chr2 (1-53)||(27864746-27864798)
chr2 (1-53)||(30915505-30915557)
chr2 (84-136)||(32505571-32505623)
chr2 (84-132)||(40613829-40613877)
chr2 (1-53)||(40613908-40613960)
chr2 (2-53)||(3737986-3738037)
chr2 (90-136)||(28381578-28381624)
chr2 (3-53)||(38273148-38273198)
chr2 (1-42)||(38882831-38882872)
chr2 (83-132)||(42257317-42257366)
chr2 (1-53)||(4060727-4060779)
chr2 (1-53)||(42257235-42257287)
chr2 (93-132)||(3440113-3440152)
chr2 (2-53)||(26891510-26891561)
chr2 (7-53)||(2533171-2533217)
chr2 (90-132)||(17823919-17823961)
chr2 (83-136)||(9058604-9058657)
chr2 (83-136)||(27864815-27864868)
chr2 (83-136)||(33436023-33436076)
chr2 (85-125)||(2533249-2533289)
chr2 (1-53)||(17820010-17820062)
chr2 (1-49)||(38732396-38732444)
chr2 (2-53)||(3440022-3440073)
chr2 (83-132)||(13365477-13365526)
chr2 (6-51)||(36168883-36168928)
chr2 (83-132)||(36168960-36169009)
chr2 (83-132)||(43490245-43490294)
chr2 (1-49)||(2997497-2997545)
chr2 (1-49)||(43490163-43490211)
[»] chr1 (48 HSPs)
chr1 (1-53)||(2581957-2582009)
chr1 (83-136)||(27564658-27564711)
chr1 (83-136)||(37649322-37649375)
chr1 (83-136)||(48716205-48716258)
chr1 (1-53)||(43174-43226)
chr1 (1-53)||(3000361-3000413)
chr1 (1-53)||(8346394-8346446)
chr1 (1-53)||(9474882-9474934)
chr1 (1-53)||(27564741-27564793)
chr1 (1-53)||(38595196-38595248)
chr1 (5-53)||(44548382-44548430)
chr1 (1-53)||(48716288-48716340)
chr1 (5-53)||(50630504-50630552)
chr1 (1-53)||(51898689-51898741)
chr1 (7-53)||(38632327-38632373)
chr1 (83-136)||(41758929-41758982)
chr1 (1-53)||(13414803-13414855)
chr1 (1-53)||(47452326-47452378)
chr1 (3-53)||(32813291-32813341)
chr1 (83-127)||(38632253-38632297)
chr1 (1-53)||(41758847-41758899)
chr1 (90-136)||(3000450-3000496)
chr1 (2-52)||(11152385-11152435)
chr1 (90-136)||(38595285-38595331)
chr1 (83-136)||(9474799-9474852)
chr1 (83-136)||(26274553-26274606)
chr1 (83-132)||(32813371-32813420)
chr1 (87-136)||(47452243-47452292)
chr1 (87-132)||(51898610-51898655)
chr1 (1-53)||(37649240-37649292)
chr1 (2-53)||(48489343-48489394)
chr1 (83-136)||(43256-43309)
chr1 (83-136)||(50630582-50630635)
chr1 (1-49)||(5959010-5959058)
chr1 (1-53)||(44334176-44334228)
chr1 (1-53)||(45044566-45044618)
chr1 (2-53)||(3302539-3302590)
chr1 (3-53)||(6260914-6260964)
chr1 (3-53)||(26440778-26440828)
chr1 (83-136)||(2582039-2582092)
chr1 (83-132)||(5958927-5958976)
chr1 (83-132)||(47748566-47748615)
chr1 (83-132)||(49811454-49811503)
chr1 (83-132)||(50590927-50590976)
chr1 (1-49)||(26274474-26274522)
chr1 (5-53)||(44454025-44454073)
chr1 (1-53)||(49811533-49811585)
chr1 (1-49)||(50591010-50591058)
[»] scaffold0321 (2 HSPs)
scaffold0321 (83-136)||(10032-10085)
scaffold0321 (1-53)||(10115-10167)
[»] scaffold0237 (2 HSPs)
scaffold0237 (83-136)||(4153-4206)
scaffold0237 (3-53)||(4073-4123)
[»] scaffold0316 (2 HSPs)
scaffold0316 (2-53)||(17097-17148)
scaffold0316 (94-132)||(17238-17276)
[»] scaffold1268 (2 HSPs)
scaffold1268 (7-53)||(935-981)
scaffold1268 (87-132)||(856-901)
[»] scaffold1267 (2 HSPs)
scaffold1267 (7-53)||(935-981)
scaffold1267 (87-132)||(856-901)
[»] scaffold0018 (1 HSPs)
scaffold0018 (83-132)||(152622-152671)
[»] scaffold0110 (1 HSPs)
scaffold0110 (9-49)||(8873-8913)


Alignment Details
Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 504179 - 504127
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  504179 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12831089 - 12831141
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12831089 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14547964 - 14548016
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14547964 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15197375 - 15197427
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15197375 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8841490 - 8841438
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8841490 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10284689 - 10284637
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10284689 tgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23122655 - 23122603
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23122655 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37038521 - 37038573
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37038521 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 504097 - 504044
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  504097 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 504044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 14548046 - 14548099
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  14548046 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 14548099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 23122573 - 23122520
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23122573 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 23122520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5957872 - 5957924
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  5957872 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34012354 - 34012302
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  34012354 tgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40424001 - 40423949
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  40424001 tgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 44507143 - 44507095
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44507143 acacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 9122229 - 9122279
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 12831171 - 12831224
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  12831171 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcat 12831224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 34012272 - 34012219
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  34012272 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcat 34012219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 42710270 - 42710217
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42710270 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcat 42710217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 43414557 - 43414508
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  43414557 ctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgta 43414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1179998 - 1179946
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  1179998 tgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 15048234 - 15048188
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15048234 ccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9122309 - 9122362
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||| |||||||| |||||||  ||||||||||||||    
T  9122309 ctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcat 9122362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 37038607 - 37038652
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  37038607 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgta 37038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 40423919 - 40423866
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  40423919 ctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcat 40423866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10621145 - 10621093
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||    
T  10621145 tgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43414639 - 43414587
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||||||||||    
T  43414639 tgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 15197459 - 15197510
Alignment:
Q  85 aatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||| ||||||||||||||||||| ||||||  |||||||||||||||    
T  15197459 aatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcat 15197510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 1179916 - 1179863
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| | ||||| |||||||| ||||||| ||||||    
T  1179916 ctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcat 1179863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 16056377 - 16056328
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  16056377 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 16056328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 24307769 - 24307720
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  24307769 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 24307720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 32707979 - 32707930
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  32707979 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 32707930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 15258986 - 15258935
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||| |||||||||||| || ||||||||||||| |||||||||||    
T  15258986 gacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 42221558 - 42221609
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||  ||||||||  |||||||||    
T  42221558 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 15048157 - 15048111
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctat 129  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||    
T  15048157 ctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctat 15048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 34307347 - 34307389
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  34307347 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 34307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 5957958 - 5958003
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||    
T  5957958 tgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgta 5958003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 8841404 - 8841359
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||||    
T  8841404 tgcatggggtgtacaagagtgtatgagaataaatggtgtctatgta 8841359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14055650 - 14055609
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggacccc 42  Q
    ||||| |||||||||||||| ||| |||||||||||||||||    
T  14055650 tgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 17443869 - 17443914
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 48  Q
    |||| ||||||||||||||||| ||||||| ||||||||| |||||    
T  17443869 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 30479450 - 30479401
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  30479450 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 30479401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 32032848 - 32032897
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  32032848 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 32032897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38229470 - 38229507
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtgga 38  Q
    |||||||||||||||||||||||| || ||||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtgga 38229507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 42354560 - 42354515
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||| |||||||||||  |||||| ||||||||||||    
T  42354560 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgta 42354515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 44507063 - 44507011
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  ||||||   ||||||||||||||    
T  44507063 ctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcat 44507011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 15258892 - 15258856
Alignment:
Q  96 tgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||  ||||||||||||||||||||||||||||    
T  15258892 tgtacaaaagtgtatggaaataaagggtgtctatgta 15258856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16056459 - 16056411
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  16056459 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16383419 - 16383467
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  16383419 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7389431 - 7389483
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7389431 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38267082 - 38267134
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38267082 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 19329966 - 19330019
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19329966 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 19330019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 38837341 - 38837394
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38837341 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcat 38837394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3784037 - 3784089
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3784037 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19329884 - 19329936
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19329884 tgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36361971 - 36361919
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36361971 tgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36362068 - 36362120
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36362068 tgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 38837261 - 38837311
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38837261 acacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 3434676 - 3434729
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  3434676 ctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcat 3434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 8080355 - 8080306
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8080355 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 8080306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 40957831 - 40957884
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  40957831 ctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcat 40957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3434604 - 3434656
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  3434604 tgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4999572 - 4999520
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4999572 tgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8080441 - 8080389
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  8080441 tgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19436245 - 19436193
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  19436245 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35137575 - 35137627
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  35137575 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 3694411 - 3694461
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  3694411 acacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 32951545 - 32951499
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32951545 ccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 4999490 - 4999437
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  4999490 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcat 4999437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 40957753 - 40957801
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40957753 acccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 26042297 - 26042348
Alignment:
Q  140 gtttggttgggaggtgttccgtatatatgcggcgctggttgtattactcttt 191  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  26042297 gtttggttggtaggtgttccgtatatatgcggcgccggttgtattgctcttt 26042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 46374858 - 46374808
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  46374858 acacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 2318217 - 2318168
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  2318217 ctaatgcatggagtgtacaaaggtgtatggaaataaagtgtgtctatgta 2318168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 11044302 - 11044355
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||| |||||||| |||||||| |||||||||||||||    
T  11044302 ctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcat 11044355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 19436163 - 19436114
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  19436163 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 32951469 - 32951416
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||||||||||    
T  32951469 ctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcat 32951416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 36362138 - 36362191
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||||| ||||||||||||||||  |||||||||||||||||||||||    
T  36362138 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcat 36362191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 46374800 - 46374751
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgta 46374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8238255 - 8238303
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||    
T  8238255 tgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36208215 - 36208267
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||| |||||| || ||||||||||||| |||||||||||    
T  36208215 tgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 7389513 - 7389565
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  7389513 ctaatacatggggtgtaca-gggtgtatgggaataaaggatgtctatgtatcat 7389565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 35523000 - 35523049
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| ||||||    
T  35523000 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgta 35523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 36361901 - 36361848
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||||  ||||||||||||||||  |||||||||||||||||||||||    
T  36361901 ctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcat 36361848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 38044321 - 38044370
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  38044321 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 38044370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 46033777 - 46033728
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  46033777 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgta 46033728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 12311041 - 12311077
Alignment:
Q  96 tgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12311041 tgtacaaaggtgtatggaaataaagggtgtctatgta 12311077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16374882 - 16374830
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||| |||||||||| | | ||||||||||    
T  16374882 tgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21234443 - 21234495
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||| ||||||||||| |||||||||| ||| || ||||||||||||||||    
T  21234443 tgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 11044238 - 11044268
Alignment:
Q  19 ctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||||||||||    
T  11044238 ctgacacgtagtcacgtggaccccgcacaag 11044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 31736001 - 31736047
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctat 129  Q
    |||||| ||||||||||||||||||||||| |||||| ||| |||||    
T  31736001 ctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctat 31736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 35522920 - 35522970
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||  |||| ||||||||||||||    
T  35522920 acacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 41915872 - 41915914
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  41915872 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 41915914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 8238337 - 8238386
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| || |||||||||    
T  8238337 ctaatacatggggtgtacaagggtgtatgcaattaaaaggcgtctatgta 8238386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 16374800 - 16374751
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||| |||||||| ||||||||  |||||||||||||||||||    
T  16374800 ctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgta 16374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 21234525 - 21234574
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||| ||||||||  |||||| ||||||||||||    
T  21234525 ctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgta 21234574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 22343485 - 22343534
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  22343485 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 22343534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 38267164 - 38267217
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| ||||| | |||||||||||||||| | | ||||||||||||    
T  38267164 ctaatgcatgggatgtacgaaggtgtatggaaataaatgatatctatgtatcat 38267217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 41423810 - 41423855
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||    
T  41423810 tgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgta 41423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2318301 - 2318261
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccc 41  Q
    |||||||||||||||||||||||  || |||||||||||||    
T  2318301 tgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 26296769 - 26296813
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtcta 128  Q
    ||||| ||| |||||||||||||||||||||||| | ||||||||    
T  26296769 taatgtatgaggtgtacaagggtgtatggaaatatatggtgtcta 26296813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38044239 - 38044287
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    ||||| |||||||||||||||||| |||| ||  |||||||||||||||    
T  38044239 tgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 39255887 - 39255851
Alignment:
Q  96 tgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||||||  |||||||||||||||||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgta 39255851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 46033857 - 46033809
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||||||| ||||||||||||||| ||||| || || |||||||||||    
T  46033857 acacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32869720 - 32869772
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32869720 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 17598678 - 17598731
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17598678 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 17598731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11427660 - 11427712
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11427660 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17598596 - 17598648
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17598596 tgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22880716 - 22880664
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22880716 tgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 11427742 - 11427795
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11427742 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 11427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 29857951 - 29858004
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29857951 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcat 29858004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 32869802 - 32869855
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  32869802 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 32869855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23128185 - 23128133
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  23128185 tgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 15832701 - 15832754
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  15832701 ctaatgcatggggtgtacaagggtgtattggaataaagggtgtctacgtatcat 15832754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6209523 - 6209471
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  6209523 tgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 29857871 - 29857921
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  29857871 acacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31976292 - 31976342
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  31976292 acacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 22880634 - 22880581
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  22880634 ctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcat 22880581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 31110737 - 31110688
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  31110737 ctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgta 31110688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31109458 - 31109414
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgca 45  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  31109458 tgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15832619 - 15832666
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 48  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||||    
T  15832619 tgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 23128103 - 23128049
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaat-aaagggtgtctatgtatcat 136  Q
    |||||||||||| ||||||||||||||||||||| ||||| | ||||||||||||    
T  23128103 ctaatgcatgggatgtacaagggtgtatggaaataaaaggttctctatgtatcat 23128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 4231672 - 4231721
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  4231672 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 4231721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28536544 - 28536494
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||  |||| ||||||||| ||||||||||    
T  28536544 tgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 31976372 - 31976421
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  31976372 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgta 31976421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 15990011 - 15989969
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  15990011 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 15989969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 30341329 - 30341287
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  30341329 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 30341287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4231593 - 4231638
Alignment:
Q  4 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| | ||  |||||||||||||||    
T  4231593 cacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 28536460 - 28536415
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||||||||||||||| ||||||| | |||| |||||    
T  28536460 tgcatggggtgtacaagggtgtatgaaaataaatgatgtcgatgta 28536415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15508082 - 15508034
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  15508082 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15990100 - 15990052
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  15990100 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30341418 - 30341370
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  30341418 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 30870148 - 30870184
Alignment:
Q  93 gggtgtacaagggtgtatggaaataaagggtgtctat 129  Q
    |||||||||| |||||||| |||||||||||||||||    
T  30870148 gggtgtacaaaggtgtatgaaaataaagggtgtctat 30870184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13811694 - 13811746
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13811694 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18520942 - 18520890
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520942 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 35785323 - 35785376
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35785323 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 35785376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2740316 - 2740368
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2740316 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36733000 - 36732948
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36733000 tgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42414360 - 42414308
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42414360 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31009032 - 31009082
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 40145455 - 40145501
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40145455 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 2740398 - 2740451
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2740398 ctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcat 2740451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 14831938 - 14831991
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  14831938 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 14831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 18520860 - 18520807
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  18520860 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcat 18520807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14831856 - 14831908
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  14831856 tgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15409668 - 15409616
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15409668 tgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33149696 - 33149644
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33149696 tgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 31132458 - 31132511
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  31132458 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcat 31132511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 33149614 - 33149561
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  33149614 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcat 33149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6679740 - 6679792
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  6679740 tgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28177817 - 28177869
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  28177817 tgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35785241 - 35785293
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  35785241 tgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35943950 - 35943898
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  35943950 tgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 36732918 - 36732872
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctat 129  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  36732918 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 35943864 - 35943819
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  35943864 tgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgta 35943819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 41470462 - 41470425
Alignment:
Q  13 aaaaatctgacacgtagtcacgtggaccccgcacaagc 50  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41470462 aaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 13811776 - 13811826
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtat 133  Q
    |||||||||||| ||||||||| ||||||| |||||| |||||||||||||    
T  13811776 ctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgtat 13811826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 21370048 - 21370098
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||| ||||||||||||| || |||||||||||||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 15409586 - 15409537
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||  |||||||||||| ||||||    
T  15409586 ctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgta 15409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 31009116 - 31009161
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||    
T  31009116 tgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgta 31009161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 40145531 - 40145584
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||| | ||||||||||||| ||||  |||||||||||||||||||||||    
T  40145531 ctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcat 40145584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 2252137 - 2252095
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  2252137 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 2252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 3921234 - 3921192
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  3921234 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 3921192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 16115296 - 16115255
Alignment:
Q  95 gtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcat 16115255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2252226 - 2252178
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  2252226 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3921323 - 3921275
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  3921323 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 40753091 - 40753051
Alignment:
Q  144 ggttgggaggtgttccgtatatatgcggcgctggttgtatt 184  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  40753091 ggttgagaggtgttccgtatatttgcggcgccggttgtatt 40753051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48183107 - 48183055
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48183107 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50052486 - 50052434
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50052486 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 42044423 - 42044373
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42044423 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 41236471 - 41236524
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41236471 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 41236524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 42044343 - 42044290
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42044343 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcat 42044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 480505 - 480453
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  480505 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11511520 - 11511468
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11511520 tgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41236389 - 41236441
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41236389 tgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54473591 - 54473539
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54473591 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 41823926 - 41823976
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3481696 - 3481748
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  3481696 tgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6034086 - 6034138
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6034086 tgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 24995082 - 24995030
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24995082 taatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcat 24995030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24995165 - 24995113
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  24995165 tgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 48183024 - 48182972
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  48183024 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 48182972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 29234294 - 29234251
Alignment:
Q  10 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29234294 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 6034168 - 6034221
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  6034168 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcat 6034221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23608277 - 23608329
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  23608277 tgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29239928 - 29239980
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  29239928 tgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31910234 - 31910286
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  31910234 tgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 50526229 - 50526178
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 52  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  50526229 tgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 29977929 - 29977979
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  29977929 acacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 53352539 - 53352497
Alignment:
Q  94 ggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  53352539 ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcat 53352497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 29240014 - 29240059
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  29240014 tgcatggggtgtacaagagtgtatgggaataaagggtgtctatgta 29240059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 50526143 - 50526098
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  50526143 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgta 50526098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 11511437 - 11511386
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  11511437 taatgcatgaggtgtacaagggtgtatggaaataaa-tgtgtctatgtatcat 11511386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 53352622 - 53352574
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  53352622 acacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 48647782 - 48647732
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||| |||||||| |||||| ||||||||||| |||||||||||||    
T  48647782 acacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 480423 - 480382
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtg 124  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  480423 ctaatgcatggggtgtacaaaggtgtatggaaataatgggtg 480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 19670692 - 19670643
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  19670692 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 19670643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 23608359 - 23608412
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| |||||||| || ||||||| |||||||| ||||||||||||||    
T  23608359 ctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcat 23608412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 29547935 - 29547886
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  29547935 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 29547886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 54473509 - 54473456
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||  |||||||||    
T  54473509 ctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcat 54473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 55475315 - 55475364
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  55475315 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 55475364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28480324 - 28480274
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28480324 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28481199 - 28481149
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28481199 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28482074 - 28482024
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28482074 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 30036994 - 30037032
Alignment:
Q  94 ggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  30036994 ggtgtacaaggatgtatgaaaataaagggtgtctatgta 30037032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 50052393 - 50052355
Alignment:
Q  94 ggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  50052393 ggtgtacaaaggtgtatgggaataaagggtgtctatgta 50052355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 31910316 - 31910365
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||| |||||||| |||||||| |||||| ||||||||||||    
T  31910316 ctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgta 31910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 41824006 - 41824055
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||| ||||||||| ||||||||  |||||| ||||||||||||    
T  41824006 ctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgta 41824055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17983801 - 17983753
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  17983801 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50813950 - 50813902
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || ||||  || ||||||||||||    
T  50813950 tgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33644242 - 33644294
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33644242 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53982053 - 53982105
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53982053 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8076435 - 8076487
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8076435 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27714949 - 27714897
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27714949 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31456731 - 31456783
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31456731 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52629342 - 52629394
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52629342 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 17470449 - 17470499
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17470449 acacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 33644324 - 33644377
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33644324 ctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcat 33644377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 52629424 - 52629477
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  52629424 ctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcat 52629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 53982135 - 53982188
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  53982135 ctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcat 53982188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 54868871 - 54868818
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  54868871 ctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 54868818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49607456 - 49607508
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  49607456 tgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54868953 - 54868901
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  54868953 tgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 11095343 - 11095290
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  11095343 ctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 11095290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 26141506 - 26141457
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  26141506 ctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgta 26141457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 31456813 - 31456866
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  31456813 ctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcat 31456866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 33118822 - 33118781
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtcta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33118822 tgcatggggtgtacaagggtgtatggaaataaagggtgtcta 33118781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 48587077 - 48587024
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  48587077 ctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcat 48587024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 49607538 - 49607591
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  49607538 ctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcat 49607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 26141588 - 26141538
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  26141588 acacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 11347898 - 11347849
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  11347898 ctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgta 11347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 41189740 - 41189691
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  41189740 ctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgta 41189691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 51419336 - 51419287
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  51419336 ctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgta 51419287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48587149 - 48587101
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  48587149 tgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26754738 - 26754789
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||||||    
T  26754738 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11095411 - 11095377
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  11095411 tgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 20764971 - 20764921
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| ||||||||| |||||||||    
T  20764971 acacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 51419416 - 51419366
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| | |||||||||||||||||    
T  51419416 acacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9563123 - 9563176
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| | ||||||| ||||||||| |||||||||| ||||||||||||    
T  9563123 ctaatgcatgagttgtacaaaggtgtatgggaataaagggtatctatgtatcat 9563176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 20764891 - 20764842
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  20764891 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgta 20764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33118909 - 33118872
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtgga 38  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33118909 tgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 36707404 - 36707351
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||||  ||||||| |||||| ||||||||||||||||    
T  36707404 ctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcat 36707351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41189822 - 41189770
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||| |||||||| | ||| |||||||||||||||||||    
T  41189822 tgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 26754829 - 26754868
Alignment:
Q  93 gggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  26754829 gggtgtacaaaggtgtatggaaataaagagtgtctatgta 26754868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 30801703 - 30801660
Alignment:
Q  89 catggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||  |||||| ||||||||||||    
T  30801703 catggggtgtacaagggtgtatgagaataaaaggtgtctatgta 30801660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36707482 - 36707439
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgc 44  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||    
T  36707482 tgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 48375672 - 48375633
Alignment:
Q  93 gggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  48375672 gggtgtacaaagatgtatggaaataaagggtgtctatgta 48375633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 11907415 - 11907465
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| ||||||||||||||||| || ||||  |||||||||||||||||||    
T  11907415 acactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 35536754 - 35536799
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||| |||||||||||  |||||| ||||||||||||    
T  35536754 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgta 35536799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 42823235 - 42823284
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  42823235 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 42823284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 45058529 - 45058480
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| |||||||||||||| |||||||| || |||| ||||||||||||    
T  45058529 ctaatacatggggtgtacaatggtgtatgcaattaaaaggtgtctatgta 45058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 9563053 - 9563093
Alignment:
Q  13 aaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  9563053 aaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11347980 - 11347928
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||| | ||| ||||||| ||| |||||||    
T  11347980 tgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13898113 - 13898061
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||  ||| ||||||| | ||||||||||    
T  13898113 tgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30801787 - 30801739
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||| ||||| |||||||  |||||||| ||||||||||    
T  30801787 acccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 35965757 - 35965709
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||| |||| ||||||||||||||||||  |||||| ||||||||||||    
T  35965757 taattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgta 35965709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36331387 - 36331339
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  36331387 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10249440 - 10249388
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10249440 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13438385 - 13438437
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13438385 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28863497 - 28863549
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28863497 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32505706 - 32505654
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32505706 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7465793 - 7465741
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7465793 tgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9058522 - 9058574
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9058522 tgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17473062 - 17473114
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17473062 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33436158 - 33436106
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33436158 tgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 5574476 - 5574423
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5574476 ctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcat 5574423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 7465711 - 7465658
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7465711 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 7465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 10249358 - 10249305
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10249358 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 10249305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 13438467 - 13438520
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  13438467 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 13438520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 17473144 - 17473197
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  17473144 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 17473197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 28863579 - 28863632
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28863579 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 28863632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 40701602 - 40701655
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  40701602 ctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 40701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5574546 - 5574494
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  5574546 tgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40701520 - 40701572
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  40701520 tgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 28381712 - 28381661
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  28381712 gacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 4060809 - 4060862
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  4060809 ctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcat 4060862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 19930796 - 19930743
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  19930796 ctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcat 19930743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 20700943 - 20700988
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  20700943 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgta 20700988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 30915587 - 30915640
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  30915587 ctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcat 30915640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 38882787 - 38882734
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  38882787 ctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcat 38882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19930878 - 19930826
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  19930878 tgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 20700865 - 20700909
Alignment:
Q  9 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  20700865 acacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27864746 - 27864798
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||    
T  27864746 tgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30915505 - 30915557
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  30915505 tgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 32505623 - 32505571
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcat 32505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 40613877 - 40613829
Alignment:
Q  84 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgta 40613829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40613960 - 40613908
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  40613960 tgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 28381624 - 28381578
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  28381624 atggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 28381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 38273198 - 38273148
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  38273198 acacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38882872 - 38882831
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggacccc 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  38882872 tgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 42257317 - 42257366
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  42257317 ctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4060727 - 4060779
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||| |||||||    
T  4060727 tgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42257235 - 42257287
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||||||||||    
T  42257235 tgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 3440113 - 3440152
Alignment:
Q  93 gggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  3440113 gggtgtacaaaggtgtatggaaataaagggtgtctatgta 3440152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 26891561 - 26891510
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| || |||||||||||| || |||||||||    
T  26891561 gacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 2533171 - 2533217
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||    
T  2533171 ccacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 17823919 - 17823961
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  17823919 atggggtgtacaagggtgtatgtaaataaaggatgtctatgta 17823961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9058604 - 9058657
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||| |||||||| |||||||||| | ||| ||||||    
T  9058604 ctaatgcatggggtgtacaagagtgtatgggaataaagggtatttatatatcat 9058657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 27864815 - 27864868
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||| |||||||||    
T  27864815 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcat 27864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 33436076 - 33436023
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| ||||||||||||||||||  |||||| |||||||||| |||||    
T  33436076 ctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcat 33436023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 2533249 - 2533289
Alignment:
Q  85 aatgcatggggtgtacaagggtgtatggaaataaagggtgt 125  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagggtgt 2533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17820062 - 17820010
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||| || || ||||||||||| ||||| ||||    
T  17820062 tgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38732396 - 38732444
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || ||||  |||||||||||||||    
T  38732396 tgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3440022 - 3440073
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||| ||| ||  | ||||||||||||||||||||||    
T  3440022 gacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 13365477 - 13365526
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||| ||| || |||| ||||||||||||    
T  13365477 ctaatacatggggtgtacaagggtgaatgcaattaaaaggtgtctatgta 13365526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 36168883 - 36168928
Alignment:
Q  6 cccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 51  Q
    ||||||||||||| |||||||| | ||| |||||||||||||||||    
T  36168883 cccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 36168960 - 36169009
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| |||||||||||||| |||||||  |||||||||||| ||||||    
T  36168960 ctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgta 36169009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 43490245 - 43490294
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||| ||||||||||||||||||| || |||| ||||||||||||    
T  43490245 ctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgta 43490294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2997545 - 2997497
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  2997545 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43490163 - 43490211
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  43490163 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2581957 - 2582009
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2581957 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 27564711 - 27564658
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27564711 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 27564658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 37649322 - 37649375
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37649322 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 37649375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 48716258 - 48716205
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48716258 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 48716205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43174 - 43226
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43174 tgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3000361 - 3000413
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3000361 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8346446 - 8346394
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8346446 tgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9474934 - 9474882
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9474934 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27564793 - 27564741
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27564793 tgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38595196 - 38595248
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38595196 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 44548430 - 44548382
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44548430 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48716340 - 48716288
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48716340 tgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 50630504 - 50630552
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50630504 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51898741 - 51898689
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51898741 tgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 38632373 - 38632327
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  38632373 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 41758929 - 41758982
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  41758929 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 41758982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13414803 - 13414855
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  13414803 tgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47452378 - 47452326
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  47452378 tgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 32813291 - 32813341
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32813291 acacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 38632297 - 38632253
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtct 127  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  38632297 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41758847 - 41758899
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  41758847 tgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 3000450 - 3000496
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  3000450 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcat 3000496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 11152435 - 11152385
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 52  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  11152435 gacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 38595285 - 38595331
Alignment:
Q  90 atggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  38595285 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcat 38595331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 9474852 - 9474799
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||| ||||||||||||||||  ||||||| |||||||||||||||    
T  9474852 ctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcat 9474799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 26274553 - 26274606
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||| | || |||||||||||||| |||||||||||||||||||||||    
T  26274553 ctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcat 26274606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 32813371 - 32813420
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  32813371 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgta 32813420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 47452292 - 47452243
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  47452292 tgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcat 47452243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 51898655 - 51898610
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  51898655 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgta 51898610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37649240 - 37649292
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||||||| |  |||||||||||||    
T  37649240 tgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 48489343 - 48489394
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||||||||||||||| || |||||||||| ||||||||||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 43256 - 43309
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||||||||||||||| ||||||   |||||||||| ||||||||||||    
T  43256 ctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcat 43309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 50630582 - 50630635
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| |||||||||||||||||||  |||||| |||||||||| |||||    
T  50630582 ctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatgcatcat 50630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5959058 - 5959010
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || ||||  |||||||||||||||    
T  5959058 tgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44334228 - 44334176
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| |||||| ||||    
T  44334228 tgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45044618 - 45044566
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||| |||||||||||||| |||| ||| |||||||||||||| ||||    
T  45044618 tgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 3302590 - 3302539
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||||| |||  ||||||||  |||||||||    
T  3302590 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 3302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 6260914 - 6260964
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||| |||||||| ||| || ||||||||||||||||| |||||||    
T  6260914 acacccacataaaaatctaacatgtggtcacgtggaccccgcataagcaca 6260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 26440778 - 26440828
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||||||||||||||||| | ||| |||| |||||| |||||||    
T  26440778 acacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 2582039 - 2582092
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||| |||| |||||||||||||||||   |||||||||||| ||||||||||    
T  2582039 ctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcat 2582092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 5958976 - 5958927
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || ||||  |||||||||||    
T  5958976 ctaatacatggggtgtacaagggtgtatgcaattaaaatgtgtctatgta 5958927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 47748566 - 47748615
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||| ||||||| || |||| ||||||||||||    
T  47748566 ctaatacatggggtgtacaagagtgtatgcaattaaaaggtgtctatgta 47748615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 49811503 - 49811454
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    |||||| ||| |||| |||||||||||||  |||||||||||||||||||    
T  49811503 ctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgta 49811454  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 50590976 - 50590927
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| ||||||||||||||||||||||| || |||| ||| ||||||||    
T  50590976 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtatctatgta 50590927  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26274474 - 26274522
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    ||||| ||||| ||||||||||||| |||||||||||| || |||||||    
T  26274474 tgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44454025 - 44454073
Alignment:
Q  5 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||| || || ||||||| ||| ||||||||||    
T  44454025 acccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49811585 - 49811533
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||||||||||||||||||||| ||  | ||| |||||||||||||    
T  49811585 tgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50591058 - 50591010
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||||||||||||||||| || | ||  |||||||||||||||    
T  50591058 tgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

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Target: scaffold0321 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 10085 - 10032
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  10085 ctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcat 10032  T

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Target: scaffold0321; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10167 - 10115
Alignment:
Q  1 tgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||| ||||| |||||||||||||||||||||||||||| || |||||||||    
T  10167 tgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

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Target: scaffold0237 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 4153 - 4206
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 136  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  4153 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcat 4206  T

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Target: scaffold0237; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 4073 - 4123
Alignment:
Q  3 acacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  4073 acacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 17097 - 17148
Alignment:
Q  2 gacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

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Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 17238 - 17276
Alignment:
Q  94 ggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  17238 ggtgtacaaaggtgtatggaaataaagggtgtctatgta 17276  T

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Target: scaffold1268 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 981 - 935
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  981 ccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold1268; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 901 - 856
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgta 856  T

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Target: scaffold1267 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 981 - 935
Alignment:
Q  7 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  981 ccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold1267; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 901 - 856
Alignment:
Q  87 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgta 856  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 152622 - 152671
Alignment:
Q  83 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 132  Q
    ||||| |||||| |||||||||||||||| || |||| ||||||||||||    
T  152622 ctaatacatgggatgtacaagggtgtatgcaattaaaaggtgtctatgta 152671  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8913 - 8873
Alignment:
Q  9 acacaaaaatctgacacgtagtcacgtggaccccgcacaag 49  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  8913 acacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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