View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4561-Insertion-11 (Length: 176)
Name: NF4561-Insertion-11
Description: NF4561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4561-Insertion-11 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 38589308 - 38589479
Alignment:
| Q |
5 |
acagcctcaagatgaatgagtgttcagaattgtatttgataattaagccactgttatttcttcctataattagcgagaattagcattttcaggataaaat |
104 |
Q |
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| T |
38589308 |
acagccttaagatgaatgagtgttcagaattgtatttgataattaagccactgttatttcttcctataattagcgagaattagcattttcaggataaaat |
38589407 |
T |
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| Q |
105 |
tgacaaggtcagcttgcattgtgatggctaataatagttaaggcatatggagcatttttcagtccttagaca |
176 |
Q |
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| T |
38589408 |
tgacaaggtcagcttgcattgtgatggctaataatagttaaggcatatggagcatttttcagtccttagaca |
38589479 |
T |
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