View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4561-Insertion-2 (Length: 632)

Name: NF4561-Insertion-2
Description: NF4561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4561-Insertion-2
NF4561-Insertion-2
[»] scaffold0157 (3 HSPs)
scaffold0157 (8-539)||(16040-16563)
scaffold0157 (528-628)||(16924-17024)
scaffold0157 (579-631)||(16564-16616)
[»] chr4 (56 HSPs)
chr4 (8-539)||(12503914-12504437)
chr4 (510-628)||(25447246-25447364)
chr4 (507-629)||(11153574-11153696)
chr4 (513-631)||(38962244-38962362)
chr4 (511-627)||(23494872-23494988)
chr4 (510-628)||(12234757-12234875)
chr4 (513-631)||(33109686-33109804)
chr4 (514-628)||(48526609-48526723)
chr4 (507-628)||(22434175-22434296)
chr4 (511-631)||(15523659-15523779)
chr4 (505-632)||(22434601-22434727)
chr4 (513-631)||(4219559-4219677)
chr4 (513-631)||(23494445-23494563)
chr4 (511-629)||(25447663-25447781)
chr4 (511-625)||(25937670-25937784)
chr4 (510-628)||(45082852-45082970)
chr4 (510-628)||(46193404-46193522)
chr4 (513-631)||(46193830-46193948)
chr4 (511-628)||(15523235-15523352)
chr4 (511-632)||(48526196-48526317)
chr4 (514-624)||(18751602-18751712)
chr4 (511-631)||(12234329-12234449)
chr4 (514-628)||(54995072-54995186)
chr4 (511-628)||(11153146-11153263)
chr4 (511-628)||(20470939-20471056)
chr4 (511-628)||(25938099-25938216)
chr4 (511-628)||(33109892-33110009)
chr4 (513-625)||(18763951-18764063)
chr4 (514-632)||(2118719-2118837)
chr4 (514-628)||(4219987-4220101)
chr4 (514-631)||(16690939-16691056)
chr4 (512-629)||(44892575-44892692)
chr4 (514-631)||(54995493-54995609)
chr4 (511-631)||(22170362-22170481)
chr4 (524-632)||(45082445-45082552)
chr4 (513-628)||(2118295-2118410)
chr4 (511-628)||(51021224-51021340)
chr4 (511-631)||(51020797-51020917)
chr4 (509-631)||(48294967-48295090)
chr4 (508-628)||(35363028-35363149)
chr4 (512-632)||(20958284-20958403)
chr4 (529-632)||(43243704-43243807)
chr4 (528-628)||(12503453-12503553)
chr4 (529-631)||(43281216-43281317)
chr4 (532-625)||(48713777-48713870)
chr4 (511-625)||(48293594-48293708)
chr4 (511-631)||(10258312-10258432)
chr4 (566-628)||(43242325-43242387)
chr4 (511-617)||(48708295-48708401)
chr4 (579-631)||(12503861-12503913)
chr4 (522-623)||(20957200-20957301)
chr4 (510-619)||(55189527-55189636)
chr4 (509-628)||(16691500-16691618)
chr4 (512-631)||(44890518-44890637)
chr4 (511-581)||(16318251-16318321)
chr4 (572-630)||(44220803-44220861)
[»] chr1 (40 HSPs)
chr1 (507-628)||(29870047-29870168)
chr1 (511-631)||(18984119-18984239)
chr1 (509-627)||(21856472-21856590)
chr1 (511-631)||(50970703-50970823)
chr1 (511-632)||(15646619-15646740)
chr1 (506-631)||(17433211-17433336)
chr1 (507-628)||(26859055-26859176)
chr1 (511-631)||(5540243-5540363)
chr1 (512-628)||(8678542-8678658)
chr1 (507-631)||(33144344-33144468)
chr1 (506-628)||(8678969-8679091)
chr1 (510-628)||(29307370-29307488)
chr1 (511-628)||(15646192-15646309)
chr1 (511-628)||(18984547-18984664)
chr1 (513-626)||(21856044-21856157)
chr1 (510-631)||(29306952-29307073)
chr1 (511-628)||(50970278-50970395)
chr1 (512-628)||(5539817-5539933)
chr1 (511-631)||(9018973-9019093)
chr1 (513-628)||(17433643-17433758)
chr1 (511-628)||(15173522-15173638)
chr1 (511-628)||(39154448-39154565)
chr1 (512-624)||(4636403-4636515)
chr1 (512-628)||(5962579-5962695)
chr1 (511-631)||(26859484-26859604)
chr1 (511-627)||(29869620-29869736)
chr1 (524-628)||(33143930-33144034)
chr1 (511-628)||(9019391-9019508)
chr1 (514-631)||(15173099-15173216)
chr1 (514-631)||(5963003-5963120)
chr1 (513-631)||(39154021-39154139)
chr1 (511-631)||(52268290-52268410)
chr1 (511-597)||(2733416-2733502)
chr1 (513-627)||(52269177-52269291)
chr1 (510-628)||(17112281-17112398)
chr1 (571-631)||(4636033-4636092)
chr1 (513-586)||(47826966-47827039)
chr1 (536-611)||(47827033-47827108)
chr1 (547-592)||(50419725-50419770)
chr1 (553-625)||(39843195-39843267)
[»] chr6 (34 HSPs)
chr6 (505-628)||(11445415-11445538)
chr6 (511-631)||(2319672-2319792)
chr6 (506-631)||(11277007-11277132)
chr6 (511-628)||(12935157-12935274)
chr6 (507-631)||(10900355-10900479)
chr6 (511-631)||(20741100-20741220)
chr6 (512-631)||(18505344-18505463)
chr6 (511-628)||(22219781-22219898)
chr6 (514-630)||(2322644-2322760)
chr6 (511-631)||(12935582-12935702)
chr6 (511-631)||(18257137-18257257)
chr6 (508-631)||(1149857-1149980)
chr6 (509-628)||(18257565-18257684)
chr6 (514-628)||(10899942-10900056)
chr6 (514-628)||(18504922-18505036)
chr6 (511-628)||(23075556-23075673)
chr6 (511-631)||(15828066-15828186)
chr6 (512-631)||(31470741-31470860)
chr6 (510-620)||(4811692-4811802)
chr6 (506-632)||(28472632-28472758)
chr6 (506-632)||(29859821-29859947)
chr6 (511-629)||(11444987-11445105)
chr6 (509-631)||(4811370-4811492)
chr6 (511-628)||(20741529-20741649)
chr6 (511-628)||(11276590-11276707)
chr6 (511-608)||(23073999-23074096)
chr6 (511-628)||(31470315-31470432)
chr6 (507-628)||(15827634-15827757)
chr6 (513-631)||(29033436-29033554)
chr6 (514-631)||(3835151-3835268)
chr6 (511-632)||(18296145-18296266)
chr6 (511-597)||(1149465-1149551)
chr6 (513-629)||(29035064-29035180)
chr6 (508-570)||(22534211-22534273)
[»] chr8 (29 HSPs)
chr8 (511-632)||(41681134-41681255)
chr8 (506-631)||(19176715-19176840)
chr8 (514-628)||(9928912-9929026)
chr8 (511-628)||(13225067-13225184)
chr8 (514-629)||(33328161-33328276)
chr8 (510-628)||(41681562-41681680)
chr8 (507-632)||(9178059-9178184)
chr8 (511-624)||(19176290-19176403)
chr8 (511-631)||(9930082-9930202)
chr8 (511-631)||(11656455-11656575)
chr8 (511-631)||(31133220-31133340)
chr8 (505-631)||(12571857-12571983)
chr8 (514-628)||(12572279-12572393)
chr8 (511-628)||(11656885-11657002)
chr8 (507-628)||(31133648-31133769)
chr8 (511-628)||(34540976-34541093)
chr8 (511-628)||(44831247-44831364)
chr8 (505-631)||(13224635-13224760)
chr8 (511-631)||(44831670-44831790)
chr8 (511-628)||(33742922-33743038)
chr8 (513-624)||(33328572-33328683)
chr8 (514-631)||(10918129-10918246)
chr8 (511-619)||(11336959-11337067)
chr8 (558-631)||(33743344-33743417)
chr8 (532-628)||(4629818-4629914)
chr8 (514-631)||(4630217-4630328)
chr8 (511-623)||(8073985-8074096)
chr8 (590-629)||(43958264-43958303)
chr8 (511-552)||(10919690-10919731)
[»] chr3 (51 HSPs)
chr3 (511-631)||(20840560-20840680)
chr3 (511-628)||(20840989-20841106)
chr3 (511-628)||(31778653-31778770)
chr3 (511-631)||(31779077-31779197)
chr3 (507-631)||(39556002-39556126)
chr3 (507-628)||(37727358-37727479)
chr3 (511-631)||(24300981-24301101)
chr3 (511-631)||(27393661-27393781)
chr3 (511-631)||(48452989-48453109)
chr3 (514-628)||(32534962-32535076)
chr3 (507-632)||(32535382-32535512)
chr3 (510-631)||(29801355-29801476)
chr3 (511-628)||(39555578-39555695)
chr3 (511-628)||(43973868-43973985)
chr3 (511-631)||(23644462-23644582)
chr3 (511-631)||(37726929-37727049)
chr3 (511-628)||(4275792-4275909)
chr3 (514-631)||(5136983-5137100)
chr3 (511-628)||(17464491-17464608)
chr3 (511-628)||(23644893-23645010)
chr3 (511-632)||(27394001-27394122)
chr3 (514-631)||(41046703-41046820)
chr3 (511-626)||(5137411-5137526)
chr3 (510-628)||(25853233-25853351)
chr3 (513-631)||(25853652-25853770)
chr3 (514-628)||(26274570-26274684)
chr3 (506-624)||(29801848-29801966)
chr3 (511-628)||(30098191-30098308)
chr3 (511-632)||(30104482-30104603)
chr3 (511-631)||(43973441-43973561)
chr3 (511-631)||(17464916-17465037)
chr3 (515-631)||(22425238-22425354)
chr3 (511-631)||(26837781-26837900)
chr3 (512-632)||(32697124-32697244)
chr3 (514-628)||(26837363-26837477)
chr3 (511-628)||(22424814-22424931)
chr3 (514-631)||(25612402-25612519)
chr3 (514-631)||(26274992-26275108)
chr3 (512-625)||(51473429-51473542)
chr3 (509-628)||(23228436-23228554)
chr3 (514-624)||(24300560-24300669)
chr3 (510-631)||(50116834-50116955)
chr3 (511-632)||(51474758-51474879)
chr3 (536-628)||(41047127-41047218)
chr3 (530-625)||(18010176-18010271)
chr3 (511-597)||(37222030-37222116)
chr3 (511-631)||(45965938-45966058)
chr3 (511-629)||(37220557-37220675)
chr3 (513-631)||(25420566-25420684)
chr3 (512-608)||(25419145-25419242)
chr3 (514-625)||(32695706-32695817)
[»] chr5 (42 HSPs)
chr5 (511-630)||(18183395-18183514)
chr5 (509-631)||(5819354-5819476)
chr5 (510-631)||(8647437-8647558)
chr5 (511-631)||(2865180-2865300)
chr5 (511-631)||(24362261-24362381)
chr5 (511-631)||(29455167-29455287)
chr5 (510-631)||(19359135-19359256)
chr5 (511-628)||(19359564-19359681)
chr5 (511-628)||(8647866-8647983)
chr5 (514-619)||(15372310-15372415)
chr5 (511-623)||(14215676-14215788)
chr5 (505-632)||(15708965-15709092)
chr5 (514-628)||(5818932-5819046)
chr5 (514-628)||(18182973-18183087)
chr5 (511-628)||(8461359-8461476)
chr5 (511-631)||(164616-164736)
chr5 (511-631)||(8460930-8461050)
chr5 (511-626)||(24331559-24331676)
chr5 (507-628)||(2864750-2864871)
chr5 (509-628)||(164189-164307)
chr5 (510-631)||(7348558-7348679)
chr5 (510-631)||(7349442-7349563)
chr5 (508-624)||(15371868-15371983)
chr5 (513-628)||(14215243-14215358)
chr5 (524-631)||(24361850-24361957)
chr5 (507-628)||(15709397-15709517)
chr5 (511-628)||(29454740-29454857)
chr5 (512-632)||(4222146-4222266)
chr5 (524-631)||(24325225-24325332)
chr5 (508-632)||(4219660-4219784)
chr5 (510-630)||(4623147-4623267)
chr5 (511-630)||(14463946-14464065)
chr5 (512-629)||(6018315-6018431)
chr5 (511-632)||(16018589-16018709)
chr5 (511-624)||(25000521-25000634)
chr5 (523-631)||(24331985-24332096)
chr5 (514-628)||(16019015-16019129)
chr5 (523-631)||(4624650-4624758)
chr5 (517-628)||(6019198-6019309)
chr5 (533-631)||(25000112-25000210)
chr5 (593-632)||(13814151-13814190)
chr5 (593-628)||(14462686-14462721)
[»] chr2 (37 HSPs)
chr2 (517-632)||(3025472-3025587)
chr2 (511-628)||(28847123-28847240)
chr2 (511-631)||(22374320-22374440)
chr2 (511-631)||(26538504-26538624)
chr2 (507-631)||(28616609-28616733)
chr2 (514-631)||(11090524-11090641)
chr2 (511-631)||(239353-239472)
chr2 (511-625)||(1978108-1978222)
chr2 (511-632)||(7446342-7446463)
chr2 (511-628)||(7446774-7446891)
chr2 (511-628)||(22374753-22374870)
chr2 (510-631)||(43058332-43058453)
chr2 (511-631)||(20444749-20444869)
chr2 (511-631)||(26538097-26538217)
chr2 (511-629)||(40027140-40027258)
chr2 (514-628)||(40027568-40027682)
chr2 (514-631)||(14432145-14432262)
chr2 (511-628)||(18450830-18450947)
chr2 (514-631)||(40815770-40815887)
chr2 (511-631)||(18451256-18451376)
chr2 (508-628)||(40815342-40815462)
chr2 (511-626)||(11090950-11091065)
chr2 (511-628)||(1978537-1978654)
chr2 (511-628)||(28617042-28617159)
chr2 (511-631)||(20440456-20440576)
chr2 (513-628)||(14432569-14432684)
chr2 (514-632)||(8425784-8425902)
chr2 (509-631)||(35779706-35779828)
chr2 (506-628)||(43058761-43058882)
chr2 (524-628)||(239780-239884)
chr2 (512-631)||(35781088-35781207)
chr2 (507-628)||(3025891-3026010)
chr2 (513-629)||(15551501-15551617)
chr2 (514-628)||(8425358-8425471)
chr2 (513-631)||(8972239-8972357)
chr2 (513-629)||(15552481-15552596)
chr2 (405-433)||(27564420-27564448)
[»] scaffold0295 (2 HSPs)
scaffold0295 (511-631)||(4793-4913)
scaffold0295 (513-625)||(5222-5334)
[»] chr7 (26 HSPs)
chr7 (511-631)||(19590525-19590645)
chr7 (511-628)||(19590953-19591070)
chr7 (514-631)||(19830423-19830540)
chr7 (511-631)||(34534216-34534336)
chr7 (511-631)||(37786767-37786887)
chr7 (523-628)||(29099862-29099967)
chr7 (511-628)||(37787195-37787312)
chr7 (511-628)||(38859069-38859186)
chr7 (511-631)||(35289326-35289446)
chr7 (508-627)||(35288900-35289019)
chr7 (517-631)||(23953154-23953268)
chr7 (514-631)||(29100276-29100393)
chr7 (511-631)||(2659265-2659385)
chr7 (505-627)||(32005043-32005165)
chr7 (511-628)||(2658839-2658956)
chr7 (511-628)||(32004614-32004731)
chr7 (511-631)||(38858643-38858763)
chr7 (514-631)||(4641443-4641560)
chr7 (511-631)||(28583439-28583559)
chr7 (511-628)||(23952730-23952848)
chr7 (511-628)||(19830848-19830964)
chr7 (511-628)||(34533791-34533908)
chr7 (514-627)||(4641873-4641983)
chr7 (506-627)||(38160946-38161067)
chr7 (524-623)||(4478133-4478232)
chr7 (512-631)||(28584347-28584466)
[»] scaffold0417 (2 HSPs)
scaffold0417 (530-629)||(10640-10739)
scaffold0417 (510-628)||(11051-11169)
[»] scaffold0027 (2 HSPs)
scaffold0027 (506-632)||(42582-42708)
scaffold0027 (514-628)||(42172-42286)
[»] scaffold1223 (2 HSPs)
scaffold1223 (506-628)||(1169-1291)
scaffold1223 (513-631)||(755-872)
[»] scaffold0432 (2 HSPs)
scaffold0432 (514-632)||(10296-10414)
scaffold0432 (514-618)||(9935-10039)
[»] scaffold0951 (2 HSPs)
scaffold0951 (511-628)||(2095-2212)
scaffold0951 (511-631)||(1667-1787)
[»] scaffold0273 (2 HSPs)
scaffold0273 (511-631)||(4632-4752)
scaffold0273 (553-628)||(4245-4320)
[»] scaffold0019 (1 HSPs)
scaffold0019 (506-631)||(134098-134223)
[»] scaffold0007 (3 HSPs)
scaffold0007 (511-631)||(64302-64422)
scaffold0007 (514-626)||(64735-64847)
scaffold0007 (511-608)||(210786-210883)
[»] scaffold0176 (2 HSPs)
scaffold0176 (507-608)||(19069-19170)
scaffold0176 (511-632)||(18835-18956)
[»] scaffold0113 (1 HSPs)
scaffold0113 (515-631)||(28668-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (507-623)||(563-679)
[»] scaffold0057 (2 HSPs)
scaffold0057 (514-631)||(61883-62000)
scaffold0057 (511-585)||(61028-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (514-614)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (524-632)||(462-570)
[»] scaffold0168 (1 HSPs)
scaffold0168 (560-631)||(7713-7784)


Alignment Details
Target: scaffold0157 (Bit Score: 397; Significance: 0; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 8 - 539
Target Start/End: Original strand, 16040 - 16563
Alignment:
Q  8 atgtctttattctcattccattttctgttctaatgaaagtgcaatttttaacatatacttgttccactatttcataagctccattttctccaaggcttcc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16040 atgtctttattctcattccattttctgttctaatgaaagtgcaatttttaacatatacttgttccactatttcataagctccattttctccaaggcttcc 16139  T
Q  108 tacactaaacacaaatacaagaaaggaaaaatgagggtatatttttatgtcattatagaatttaatcagtagagtagaattttagtgttagtattacttt 207  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      |||| |||||||||||||||||||||||    
T  16140 tacactaaacacaaacacaagaaaggaaaaatgagggtatatttttatgtcattatagaatttaat------agtaaaattttagtgttagtattacttt 16233  T
Q  208 taccttataccatgacctggtccacaagttacacctgtaatgttaatatttgatgtaccattgttcattgctatgcaatcgtctcctatatattnnnnnn 307  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  16234 taccttataccatgacctggtccacaagttacccctgtaatgttaatatttgatgtaccattgttcattgctatgcaatcgtctcctatatattaaaaag 16333  T
Q  308 ntaaactttcaaataatatattgtgtgacaaatttacaaaatgtgcatattaaataatttattttcctaatatgtcagagattttgaaaaaacaatcact 407  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16334 --aaactttcaaataatatattgtgtgacaaatttacaaaatgtgcatattaaataatttattttcctaatatgtcagagattttgaaaaaacaatcaca 16431  T
Q  408 tttttaaaacaaaataatcacttttgcatgactgtattcgtttgttgcttttatcttttaaaatgagaactt-gagtttgannnnnnnngtgtagaacaa 506  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||         ||| ||||||    
T  16432 tttttaaaacaaaataatcacttttgcatgactgaattagtttgttgcttttttcttttaaaatgagaacttagagtttgatttttttt-tgttgaacaa 16530  T
Q  507 ttttggcttaattatatttttggtcctcgtgtt 539  Q
    ||||||||||| || | ||||||||||||||||    
T  16531 ttttggcttaactacacttttggtcctcgtgtt 16563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 528 - 628
Target Start/End: Complemental strand, 17024 - 16924
Alignment:
Q  528 ggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctac 627  Q
    |||||||||||||||   |||||| ||||||| ||| ||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  628 c 628  Q
    |    
T  16924 c 16924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 579 - 631
Target Start/End: Original strand, 16564 - 16616
Alignment:
Q  579 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccc 16616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 397; Significance: 0; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 8 - 539
Target Start/End: Complemental strand, 12504437 - 12503914
Alignment:
Q  8 atgtctttattctcattccattttctgttctaatgaaagtgcaatttttaacatatacttgttccactatttcataagctccattttctccaaggcttcc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12504437 atgtctttattctcattccattttctgttctaatgaaagtgcaatttttaacatatacttgttccactatttcataagctccattttctccaaggcttcc 12504338  T
Q  108 tacactaaacacaaatacaagaaaggaaaaatgagggtatatttttatgtcattatagaatttaatcagtagagtagaattttagtgttagtattacttt 207  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      |||| |||||||||||||||||||||||    
T  12504337 tacactaaacacaaacacaagaaaggaaaaatgagggtatatttttatgtcattatagaatttaat------agtaaaattttagtgttagtattacttt 12504244  T
Q  208 taccttataccatgacctggtccacaagttacacctgtaatgttaatatttgatgtaccattgttcattgctatgcaatcgtctcctatatattnnnnnn 307  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  12504243 taccttataccatgacctggtccacaagttacccctgtaatgttaatatttgatgtaccattgttcattgctatgcaatcgtctcctatatattaaaaag 12504144  T
Q  308 ntaaactttcaaataatatattgtgtgacaaatttacaaaatgtgcatattaaataatttattttcctaatatgtcagagattttgaaaaaacaatcact 407  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12504143 --aaactttcaaataatatattgtgtgacaaatttacaaaatgtgcatattaaataatttattttcctaatatgtcagagattttgaaaaaacaatcaca 12504046  T
Q  408 tttttaaaacaaaataatcacttttgcatgactgtattcgtttgttgcttttatcttttaaaatgagaactt-gagtttgannnnnnnngtgtagaacaa 506  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||         ||| ||||||    
T  12504045 tttttaaaacaaaataatcacttttgcatgactgaattagtttgttgcttttttcttttaaaatgagaacttagagtttgatttttttt-tgttgaacaa 12503947  T
Q  507 ttttggcttaattatatttttggtcctcgtgtt 539  Q
    ||||||||||| || | ||||||||||||||||    
T  12503946 ttttggcttaactacacttttggtcctcgtgtt 12503914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 510 - 628
Target Start/End: Original strand, 25447246 - 25447364
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  25447246 tggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25447345  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  25447346 ttgcatttttcgtcctacc 25447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 507 - 629
Target Start/End: Complemental strand, 11153696 - 11153574
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  11153696 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcattt 11153597  T
Q  607 ttgttgcatttttcgtcctaccc 629  Q
    |||||||||||||||||||||||    
T  11153596 ttgttgcatttttcgtcctaccc 11153574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 513 - 631
Target Start/End: Complemental strand, 38962362 - 38962244
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  38962262 catttttcgtcctaccccc 38962244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 627
Target Start/End: Complemental strand, 23494988 - 23494872
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  23494988 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 23494889  T
Q  611 tgcatttttcgtcctac 627  Q
    |||||||||||||||||    
T  23494888 tgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 510 - 628
Target Start/End: Complemental strand, 12234875 - 12234757
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||    
T  12234875 tggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12234776  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  12234775 ttgcatttttcgtcctacc 12234757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 33109686 - 33109804
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| ||||||||||||||||||||||  |||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  33109786 catttttcgtcctaccccc 33109804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 514 - 628
Target Start/End: Complemental strand, 48526723 - 48526609
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  48526623 atttttcgtcctacc 48526609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 507 - 628
Target Start/End: Original strand, 22434175 - 22434296
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  22434175 ttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22434274  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    |||||| |||||||||||||||    
T  22434275 ttgttgtatttttcgtcctacc 22434296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 15523779 - 15523659
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| ||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  15523779 ggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgt 15523680  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  15523679 tgcatttttcgtcctaccccc 15523659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 505 - 632
Target Start/End: Complemental strand, 22434727 - 22434601
Alignment:
Q  505 aattttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcat 604  Q
    ||||| || ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||    
T  22434727 aatttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcat 22434629  T
Q  605 ttttgttgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||||||||    
T  22434628 ttttgttgcatttttcgtcctaccccca 22434601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 4219559 - 4219677
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| | |||||||| ||||||||| ||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  4219659 catttttcgtcctaccccc 4219677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 23494445 - 23494563
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  23494545 catttttcgtcctaccccc 23494563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 511 - 629
Target Start/End: Complemental strand, 25447781 - 25447663
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  25447781 ggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgt 25447682  T
Q  611 tgcatttttcgtcctaccc 629  Q
    |||||||||||||||||||    
T  25447681 tgcatttttcgtcctaccc 25447663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 511 - 625
Target Start/End: Original strand, 25937670 - 25937784
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  25937670 ggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25937769  T
Q  611 tgcatttttcgtcct 625  Q
    ||||||||| |||||    
T  25937770 tgcattttttgtcct 25937784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 510 - 628
Target Start/End: Complemental strand, 45082970 - 45082852
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | ||||||||||||||||||||  |||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  45082970 tggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 45082871  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  45082870 ttgcatttttcgtcctacc 45082852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 510 - 628
Target Start/End: Original strand, 46193404 - 46193522
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  46193404 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttg 46193503  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  46193504 ttgcatttttcgtcctacc 46193522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 513 - 631
Target Start/End: Complemental strand, 46193948 - 46193830
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  46193848 catttttcgtcctaccccc 46193830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 15523235 - 15523352
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |    
T  15523235 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttt 15523334  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  15523335 tgcatttttcgtcctacc 15523352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 48526196 - 48526317
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||| |||||||||||  ||||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  48526196 ggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 48526295  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||    
T  48526296 tgcatttttcgtcctaccccca 48526317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 514 - 624
Target Start/End: Original strand, 18751602 - 18751712
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  614 atttttcgtcc 624  Q
    |||||||||||    
T  18751702 atttttcgtcc 18751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 12234329 - 12234449
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||| ||||||||  || ||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  12234329 ggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 12234428  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  12234429 tgcatttttcgtcctaccccc 12234449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 54995072 - 54995186
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  54995172 atttttcgtcctacc 54995186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 11153146 - 11153263
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| |||||||||||||||||||| |||||||  ||| ||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||    
T  11153146 ggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 11153245  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  11153246 tgcatttttcgtcctacc 11153263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 20471056 - 20470939
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | |||||||||| | || ||||||||||||||||||||||| ||||| ||||||||||||    
T  20471056 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 20470957  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  20470956 tgcatttttcgtcctacc 20470939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 25938216 - 25938099
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||| ||||||||| ||||||| |||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  25938216 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgt 25938117  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||| ||||||||    
T  25938116 tgcattttttgtcctacc 25938099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 33110009 - 33109892
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||| |||||||| || |||| |||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  33110009 ggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 33109910  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  33109909 tgcatttttcgtcctacc 33109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 513 - 625
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||||||||||||| ||||||| |||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  613 catttttcgtcct 625  Q
    |||||||||||||    
T  18763963 catttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 514 - 632
Target Start/End: Complemental strand, 2118837 - 2118719
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||| ||||||||||| || |||||||||||||||||  | |||||||||| |||||||||||| ||||| |||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  614 atttttcgtcctaccccca 632  Q
    |||||||||||||||||||    
T  2118737 atttttcgtcctaccccca 2118719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 514 - 628
Target Start/End: Complemental strand, 4220101 - 4219987
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||| ||||||  |||||||||||||||||| |||| ||||| |||||||||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  4220001 atttttcgtcctacc 4219987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 16690939 - 16691056
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| |||||||||||| |||||||| |||||||| |||| ||||||||||| ||||||||| |||||||   |||||||| |||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  16691039 atttttcgtcctaccccc 16691056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 512 - 629
Target Start/End: Complemental strand, 44892692 - 44892575
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    |||||||||||||||||||||||||||||||  ||||||| |||| |||| ||||| ||||||||||||||||||| ||| ||||| |||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  612 gcatttttcgtcctaccc 629  Q
    ||||||||||||||||||    
T  44892592 gcatttttcgtcctaccc 44892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 54995609 - 54995493
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||| || |||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||| ||||    
T  54995510 atttttcgtcctaacccc 54995493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 22170481 - 22170362
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  ||||| | |||| || |||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  22170481 ggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgt 22170383  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  22170382 tgcatttttcgtcctaccccc 22170362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 524 - 632
Target Start/End: Original strand, 45082445 - 45082552
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    |||||||| ||||||||||||||||||| ||| |||||  |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  45082445 ttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 45082543  T
Q  624 ctaccccca 632  Q
    |||||||||    
T  45082544 ctaccccca 45082552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 513 - 628
Target Start/End: Original strand, 2118295 - 2118410
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||| ||||||||| ||||||| |||| |||||||||| |||||||||| |||||||  ||||||||| ||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  613 catttttcgtcctacc 628  Q
    ||||||||||||||||    
T  2118395 catttttcgtcctacc 2118410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 51021340 - 51021224
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||| |||||||||||||| ||||||| |||| |||||||||| |||||||||| ||||||||||||||| || ||||| ||||||    
T  51021340 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgt 51021242  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  51021241 tgcatttttcgtcctacc 51021224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 51020797 - 51020917
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||| ||||| ||||||||   | |||  |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  51020797 ggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgt 51020896  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  51020897 tgcatttttcgtcctaccccc 51020917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 509 - 631
Target Start/End: Complemental strand, 48295090 - 48294967
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| |||||||||| |||||||||| |||||||| |||| ||||| ||||| ||||||||| |||||||  ||| ||||| ||||||||||    
T  48295090 ttggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcattttt 48294991  T
Q  609 gttgcattttt-cgtcctaccccc 631  Q
    ||||||||||| ||||||||||||    
T  48294990 gttgcatttttccgtcctaccccc 48294967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 508 - 628
Target Start/End: Complemental strand, 35363149 - 35363028
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgc-ctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||| ||||||||| |||| ||||| |||| | |||||||||||| ||||| ||||||||    
T  35363149 tttggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcattt 35363050  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    |||||||||||||||| |||||    
T  35363049 ttgttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 512 - 632
Target Start/End: Complemental strand, 20958403 - 20958284
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||| |||||||| |||||| ||||||| |||| |||||||||| |||||||||||||||||   ||||||||| |||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  612 gcatttttcgtcctaccccca 632  Q
    |||||||| ||||||||||||    
T  20958303 gcattttt-gtcctaccccca 20958284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 632
Target Start/End: Complemental strand, 43243807 - 43243704
Alignment:
Q  529 gtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||| ||||||| |||| ||||| |||| ||||||||||||||||||  || |||||| ||||||||||||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T
Q  629 ccca 632  Q
    ||||    
T  43243707 ccca 43243704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 528 - 628
Target Start/End: Original strand, 12503453 - 12503553
Alignment:
Q  528 ggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctac 627  Q
    |||||||||||||||   |||||| ||||||| ||| ||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  628 c 628  Q
    |    
T  12503553 c 12503553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 529 - 631
Target Start/End: Complemental strand, 43281317 - 43281216
Alignment:
Q  529 gtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||| ||||||| |||| ||||| |||| ||||||||||||||||||  || |||||| ||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  629 ccc 631  Q
    |||    
T  43281218 ccc 43281216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 532 - 625
Target Start/End: Complemental strand, 48713870 - 48713777
Alignment:
Q  532 ctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcct 625  Q
    |||||||||| | |||||||||||| ||||| |||  ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  48713870 ctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 625
Target Start/End: Original strand, 48293594 - 48293708
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||  |||||| |||| || ||||| || ||||||||| |||||||  || |||||| ||||||||||||    
T  48293594 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgt 48293693  T
Q  611 tgcatttttcgtcct 625  Q
    |||||||||| ||||    
T  48293694 tgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 10258432 - 10258312
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||| ||| ||||||| |||| |||||||||| ||||||||||||  ||||  ||  ||||| ||||||||||||    
T  10258432 ggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttgt 10258333  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||| |||| ||| |||||||    
T  10258332 tgcagttttagtcttaccccc 10258312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 628
Target Start/End: Original strand, 43242325 - 43242387
Alignment:
Q  566 cctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  43242325 cctttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacc 43242387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 617
Target Start/End: Original strand, 48708295 - 48708401
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||  ||||||||| |||  || |||| || ||||||| |||||||||| |||||||| ||||||||| ||||||||||||    
T  48708295 ggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgt 48708394  T
Q  611 tgcattt 617  Q
    |||||||    
T  48708395 tgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 579 - 631
Target Start/End: Complemental strand, 12503913 - 12503861
Alignment:
Q  579 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccc 12503861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 522 - 623
Target Start/End: Original strand, 20957200 - 20957301
Alignment:
Q  522 atttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcg 621  Q
    |||||||||||||| |||||||  |||||| |||| ||||| | |  |||||||||| |||||||  ||||||||| ||||| |||||||||||||||||    
T  20957200 atttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcg 20957299  T
Q  622 tc 623  Q
    ||    
T  20957300 tc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 510 - 619
Target Start/End: Original strand, 55189527 - 55189636
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||||||||||| |||||||||||||  ||| |||| ||| ||||  |||| |||||||| |||||||||  ||| ||||| |||||||||||    
T  55189527 tggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttg 55189626  T
Q  610 ttgcattttt 619  Q
     | |||||||    
T  55189627 ctacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 628
Target Start/End: Complemental strand, 16691618 - 16691500
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | ||||| |||  ||||||||  ||||||| |||| ||||||||||| |||||| || |||||||  |||||| || ||| ||||||    
T  16691618 ttggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattattttt 16691520  T
Q  609 gttgcatttttcgtcctacc 628  Q
    ||||||||||||||| ||||    
T  16691519 gttgcatttttcgtcatacc 16691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 512 - 631
Target Start/End: Original strand, 44890518 - 44890637
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||| ||||||||  ||| ||| |||| ||||| |||| ||||||||||||||||||   ||||| || |||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  612 gcatttttcgtcctaccccc 631  Q
    ||||||||| || |||||||    
T  44890618 gcatttttcatcataccccc 44890637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 16318321 - 16318251
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaa 581  Q
    |||||||||| | |||||||||||||||||||| |||||||  |||||| ||||||| |||||||||||||    
T  16318321 ggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 630
Target Start/End: Complemental strand, 44220861 - 44220803
Alignment:
Q  572 taaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacccc 630  Q
    |||||||||||||||  ||||||||  ||||||||||||| |||||||||| |||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccc 44220803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 507 - 628
Target Start/End: Complemental strand, 29870168 - 29870047
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  29870168 ttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattt 29870069  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||    
T  29870068 ttgttgcatttttcgtcctacc 29870047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 18984119 - 18984239
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18984119 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18984218  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  18984219 tgcatttttcgtcctaccccc 18984239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 509 - 627
Target Start/End: Complemental strand, 21856590 - 21856472
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856590 ttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 21856491  T
Q  609 gttgcatttttcgtcctac 627  Q
    | |||||||||||||||||    
T  21856490 gctgcatttttcgtcctac 21856472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 50970823 - 50970703
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  50970823 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 50970724  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  50970723 tgcatttttcgtcctaccccc 50970703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 632
Target Start/End: Complemental strand, 15646740 - 15646619
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  15646740 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 15646641  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||    
T  15646640 tgcatttttcgtcctaccccca 15646619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 506 - 631
Target Start/End: Original strand, 17433211 - 17433336
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    ||||||||||||||| | ||||||||||| |||||||| |||||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||    
T  17433211 attttggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatt 17433310  T
Q  606 tttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||| ||||||||||    
T  17433311 tttgttgcatttttcatcctaccccc 17433336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 507 - 628
Target Start/End: Original strand, 26859055 - 26859176
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||| ||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  26859055 ttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattt 26859154  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||    
T  26859155 ttgttgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 5540363 - 5540243
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||    
T  5540363 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgt 5540264  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  5540263 tgcatttttcgtcctaccccc 5540243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 512 - 628
Target Start/End: Original strand, 8678542 - 8678658
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  612 gcatttttcgtcctacc 628  Q
    |||||||||||||||||    
T  8678642 gcatttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 507 - 631
Target Start/End: Complemental strand, 33144468 - 33144344
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    ||||| |||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| || ||||||| ||||||||    
T  33144468 ttttgacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcattt 33144369  T
Q  607 ttgttgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||||||    
T  33144368 ttgttgcatttttcgtcctaccccc 33144344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 506 - 628
Target Start/End: Complemental strand, 8679091 - 8678969
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||| |||| ||||| |||||||    
T  8679091 attttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatt 8678992  T
Q  606 tttgttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||||||    
T  8678991 tttgttgcatttttcgtcctacc 8678969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 510 - 628
Target Start/End: Complemental strand, 29307488 - 29307370
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||  | |||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  29307488 tggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 29307389  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  29307388 ttgcatttttcgtcctacc 29307370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 15646192 - 15646309
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||| ||| |||||| ||||||||||||    
T  15646192 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgt 15646291  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  15646292 tgcatttttcgtcctacc 15646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 18984664 - 18984547
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||| ||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18984664 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18984565  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  18984564 tgcatttttcgtcctacc 18984547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 513 - 626
Target Start/End: Original strand, 21856044 - 21856157
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  613 catttttcgtccta 626  Q
    |||||||| |||||    
T  21856144 catttttcatccta 21856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 510 - 631
Target Start/End: Original strand, 29306952 - 29307073
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | ||||| |||||||||||||| ||||||| |||||||||| || | ||||||||||||||||||||||||||||| |||||||||||    
T  29306952 tggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 29307051  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||    
T  29307052 ttgcatttttcgtcctaccccc 29307073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 50970278 - 50970395
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||    
T  50970278 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgt 50970377  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  50970378 tgcatttttcgtcctacc 50970395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 512 - 628
Target Start/End: Original strand, 5539817 - 5539933
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  612 gcatttttcgtcctacc 628  Q
    | |||||||||||||||    
T  5539917 gtatttttcgtcctacc 5539933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 9018973 - 9019093
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | ||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  9018973 ggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgt 9019072  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  9019073 tgcatttttcgtcctaccccc 9019093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 513 - 628
Target Start/End: Complemental strand, 17433758 - 17433643
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||||||||| ||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  613 catttttcgtcctacc 628  Q
    ||||||||||||||||    
T  17433658 catttttcgtcctacc 17433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 15173638 - 15173522
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  15173638 ggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcctttt-aaaacagaacaaaatggtccttcaattatcatttttgt 15173540  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  15173539 tgcatttttcgtcctacc 15173522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 39154565 - 39154448
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||  |||||||||| ||||||| |||||||||| ||||||||||||    
T  39154565 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgt 39154466  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  39154465 tgcatttttcgtcctacc 39154448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 512 - 624
Target Start/End: Complemental strand, 4636515 - 4636403
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  612 gcatttttcgtcc 624  Q
    |||||||||||||    
T  4636415 gcatttttcgtcc 4636403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 512 - 628
Target Start/End: Original strand, 5962579 - 5962695
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| |||||||||||||||||| ||||||| ||| ||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  612 gcatttttcgtcctacc 628  Q
    ||||||||||| |||||    
T  5962679 gcatttttcgttctacc 5962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 26859604 - 26859484
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||| |||||||||||||| ||||||| ||||||  ||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  26859604 ggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgt 26859505  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  26859504 tgcatttttcgtcctaccccc 26859484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 511 - 627
Target Start/End: Original strand, 29869620 - 29869736
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||  |||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  29869620 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 29869719  T
Q  611 tgcatttttcgtcctac 627  Q
    |||||||||||||||||    
T  29869720 tgcatttttcgtcctac 29869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 524 - 628
Target Start/End: Original strand, 33143930 - 33144034
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  33143930 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatttcgtc 33144029  T
Q  624 ctacc 628  Q
    |||||    
T  33144030 ctacc 33144034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 9019508 - 9019391
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  |||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  9019508 ggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgt 9019409  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  9019408 tgcatttttcgtcctacc 9019391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 15173099 - 15173216
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| |||||||| ||||||||  |||||||||||| |||||| |||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  15173199 atttttcgtcctaccccc 15173216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 5963120 - 5963003
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||| || |||| |||||||| |||||||||| ||| ||||| |||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  5963020 atttttcgtcctaccccc 5963003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 39154021 - 39154139
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||| || ||||||||  |||||| ||||||| || |||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  39154121 catttttcgtcctaccccc 39154139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 52268290 - 52268410
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||| |||||| || |||| |||| |||||||||| ||||||||||||||||||| ||| ||||  ||||||||||||    
T  52268290 ggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgt 52268389  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||| ||||||||||||||||    
T  52268390 tgcacttttcgtcctaccccc 52268410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 597
Target Start/End: Complemental strand, 2733502 - 2733416
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaa 597  Q
    |||||||||||| |||||||||| ||||||||| ||| ||  |||| |||||||||| |||||||||||||||||||||||||||||    
T  2733502 ggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 513 - 627
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||||||||||||   |||||||||||  ||| ||||| ||||||||||||||||||  ||| ||||  ||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  613 catttttcgtcctac 627  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 510 - 628
Target Start/End: Original strand, 17112281 - 17112398
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | ||||||| ||| ||||||| ||||||||||||| ||||   ||| |||||||| |||| ||||  ||||||||| ||||||||||     
T  17112281 tggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcattttta 17112379  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  17112380 ttgcatttttcgtcctacc 17112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 631
Target Start/End: Original strand, 4636033 - 4636092
Alignment:
Q  571 ttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccc 4636092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 586
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaa 586  Q
    |||||||| | |||||||||||||||||||||||||||| |||| ||||| |||| |||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 536 - 611
Target Start/End: Complemental strand, 47827108 - 47827033
Alignment:
Q  536 tgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    |||||||| ||||||| |||| ||||| |||| ||||||||||||||||||  |||||| || |||||||||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 592
Target Start/End: Complemental strand, 50419770 - 50419725
Alignment:
Q  547 actcatgaaactggtcctgcctttttaaaacagaacaaaacggtcc 592  Q
    ||||| |||| |||||||||||||||||||  ||||||||||||||    
T  50419770 actcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 625
Target Start/End: Original strand, 39843195 - 39843267
Alignment:
Q  553 gaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcct 625  Q
    |||||||||||||||||||| |||  |||||||||||||| |  | |||||| ||| ||||| |||| |||||    
T  39843195 gaaactggtcctgcctttttcaaatcgaacaaaacggtccctatactatcatgttttttgcacttttggtcct 39843267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 505 - 628
Target Start/End: Complemental strand, 11445538 - 11445415
Alignment:
Q  505 aattttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcat 604  Q
    ||||| |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11445538 aatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcat 11445439  T
Q  605 ttttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||||    
T  11445438 ttttgttgcatttttcgtcctacc 11445415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 2319672 - 2319792
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2319672 ggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 2319771  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  2319772 tgcatttttcgtcctaccccc 2319792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 506 - 631
Target Start/End: Complemental strand, 11277132 - 11277007
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    ||||||||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||| |||||| |||||||    
T  11277132 attttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatt 11277033  T
Q  606 tttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||||||    
T  11277032 tttgttgcatttttcgtcctaccccc 11277007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 12935157 - 12935274
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  12935157 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12935256  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  12935257 tgcatttttcgtcctacc 12935274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 507 - 631
Target Start/End: Complemental strand, 10900479 - 10900355
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | ||||||||||||| |||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  10900479 ttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 10900380  T
Q  607 ttgttgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||||||    
T  10900379 ttgttgcatttttcgtcctaccccc 10900355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 20741100 - 20741220
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  20741100 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgt 20741199  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  20741200 tgcatttttcgtcctaccccc 20741220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 512 - 631
Target Start/End: Complemental strand, 18505463 - 18505344
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||| ||||||||| |||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  612 gcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccc 18505344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 22219898 - 22219781
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  22219898 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22219799  T
Q  611 tgcatttttcgtcctacc 628  Q
    |||||||||||| |||||    
T  22219798 tgcatttttcgttctacc 22219781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 514 - 630
Target Start/End: Complemental strand, 2322760 - 2322644
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  614 atttttcgtcctacccc 630  Q
    |||||||||||||||||    
T  2322660 atttttcgtcctacccc 2322644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 12935702 - 12935582
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  12935702 ggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgt 12935603  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    | |||||||||||||||||||    
T  12935602 tacatttttcgtcctaccccc 12935582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 18257137 - 18257257
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18257137 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18257236  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||||||| |||||||    
T  18257237 tgcatttttcgtcataccccc 18257257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 508 - 631
Target Start/End: Complemental strand, 1149980 - 1149857
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttt 607  Q
    ||||||||||||| | |||||||||||||||||| | |||||||||||||||||| |||| |||||||| |||||||||||||||||||| || ||||||    
T  1149980 tttggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttt 1149881  T
Q  608 tgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||||    
T  1149880 tgttgcatttttcgtcctaccccc 1149857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 509 - 628
Target Start/End: Complemental strand, 18257684 - 18257565
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  18257684 ttggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 18257585  T
Q  609 gttgcatttttcgtcctacc 628  Q
    ||| ||||||||||||||||    
T  18257584 gttacatttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 10899942 - 10900056
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  10900042 atttttcgtcctacc 10900056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 18504922 - 18505036
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  18505022 atttttcgtcctacc 18505036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 23075673 - 23075556
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  23075673 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 23075574  T
Q  611 tgcatttttcgtcctacc 628  Q
    |||||||||||| |||||    
T  23075573 tgcatttttcgttctacc 23075556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 15828186 - 15828066
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| | || |||||||||| |||||||||||||||||| ||||||||||||    
T  15828186 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgt 15828087  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  15828086 tgcatttttcgtcctaccccc 15828066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 512 - 631
Target Start/End: Complemental strand, 31470860 - 31470741
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||| ||||||| | ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  612 gcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||    
T  31470760 gcatttttcgtcctaccccc 31470741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 510 - 620
Target Start/End: Complemental strand, 4811802 - 4811692
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||||||    
T  4811802 tggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttg 4811703  T
Q  610 ttgcatttttc 620  Q
    |||||||||||    
T  4811702 ttgcatttttc 4811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 506 - 632
Target Start/End: Original strand, 28472632 - 28472758
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | |||||||||||||||||||| | ||||| |||| |||||||||| |||||||||||||||||| |||| ||||| |||||||    
T  28472632 atttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatt 28472731  T
Q  606 tttgttgcatttttcgtcctaccccca 632  Q
    |||||||||||||||||||||||||||    
T  28472732 tttgttgcatttttcgtcctaccccca 28472758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 506 - 632
Target Start/End: Original strand, 29859821 - 29859947
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | |||||||||||||||||||| | ||||| |||| |||||||||| |||||||||||||||||| |||| ||||| |||||||    
T  29859821 atttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatt 29859920  T
Q  606 tttgttgcatttttcgtcctaccccca 632  Q
    |||||||||||||||||||||||||||    
T  29859921 tttgttgcatttttcgtcctaccccca 29859947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 511 - 629
Target Start/End: Original strand, 11444987 - 11445105
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||| |||||||||||  |||||||||||| |||| |||||||||| ||||||||||||    
T  11444987 ggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgt 11445086  T
Q  611 tgcatttttcgtcctaccc 629  Q
    |||||||||||||||||||    
T  11445087 tgcatttttcgtcctaccc 11445105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 509 - 631
Target Start/End: Original strand, 4811370 - 4811492
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | |||||||||  || |||||||||||||| |||||||||| |||| |||||||| |||| ||||||||||||||| ||||||||||    
T  4811370 ttggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcattttt 4811469  T
Q  609 gttgcatttttcgtcctaccccc 631  Q
    ||| ||||||||||| |||||||    
T  4811470 gtttcatttttcgtcttaccccc 4811492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 20741649 - 20741529
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatca---tttt 607  Q
    |||||||||| | | |||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||   ||||    
T  20741649 ggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttt 20741550  T
Q  608 tgttgcatttttcgtcctacc 628  Q
    | |||||||||||||||||||    
T  20741549 ttttgcatttttcgtcctacc 20741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 11276590 - 11276707
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |  ||| |||| |||||||||||||||||||||||||| |||| || |||||||||||||||||| |||||||||| | ||||||||||    
T  11276590 ggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgt 11276689  T
Q  611 tgcatttttcgtcctacc 628  Q
    | ||||||||||||||||    
T  11276690 ttcatttttcgtcctacc 11276707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 608
Target Start/End: Original strand, 23073999 - 23074096
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  23073999 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 31470315 - 31470432
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||| |||||||||||||| ||||||| |||||||||| |||  ||||||||||||||||||| ||| ||||| ||| ||||||||    
T  31470315 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgt 31470414  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  31470415 tgcatttttcgtcctacc 31470432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 507 - 628
Target Start/End: Original strand, 15827634 - 15827757
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaa--acggtccttcaagtatcat 604  Q
    |||| ||||||||| | ||||||||||||||||||||  |||||| ||||||||| ||| | |||||||||| ||||||  |||||||||||| ||||||    
T  15827634 ttttcgcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcat 15827733  T
Q  605 ttttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||||    
T  15827734 ttttgttgcatttttcgtcctacc 15827757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 29033436 - 29033554
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||||||||||| |||||| || |||| |||| |||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  613 catttttcgtcctaccccc 631  Q
    ||  |||| ||||||||||    
T  29033536 cacatttcatcctaccccc 29033554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 3835268 - 3835151
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||  ||||||||  ||||||| |||| ||||||||||| |||||||||||||||||  |||||| || |||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  3835168 atttttcgtcctaccccc 3835151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 18296145 - 18296266
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| |||| ||||||||||||||   ||||||  ||| || |  |||| ||||||||||||||||||| ||||||||  ||||||||||||    
T  18296145 ggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgt 18296244  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||    
T  18296245 tgcatttttcgtcctaccccca 18296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 597
Target Start/End: Original strand, 1149465 - 1149551
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaa 597  Q
    |||||||||| | ||||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  1149465 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaa 1149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 513 - 629
Target Start/End: Complemental strand, 29035180 - 29035064
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||| ||||||||||||| | ||||||| |||| ||||  |||| ||||||||||||||||||  |||||| |  ||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  613 catttttcgtcctaccc 629  Q
    |||||||||||| ||||    
T  29035080 catttttcgtcccaccc 29035064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 570
Target Start/End: Complemental strand, 22534273 - 22534211
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgccttt 570  Q
    ||||||||||||| | ||||||||||||| |||||  | ||||| |||| |||||||||||||    
T  22534273 tttggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgccttt 22534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 6e-48; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 41681134 - 41681255
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  41681134 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681233  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||    
T  41681234 tgcatttttcgtcctaccccca 41681255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 506 - 631
Target Start/End: Complemental strand, 19176840 - 19176715
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | |||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  19176840 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19176741  T
Q  606 tttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||||||    
T  19176740 tttgttgcatttttcgtcctaccccc 19176715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 9928912 - 9929026
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  9929012 atttttcgtcctacc 9929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 13225184 - 13225067
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  13225184 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 13225085  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  13225084 tgcatttttcgtcctacc 13225067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 514 - 629
Target Start/End: Original strand, 33328161 - 33328276
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  614 atttttcgtcctaccc 629  Q
    ||||||||||||||||    
T  33328261 atttttcgtcctaccc 33328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 510 - 628
Target Start/End: Complemental strand, 41681680 - 41681562
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  41681680 tggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681581  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  41681580 ttgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 507 - 632
Target Start/End: Complemental strand, 9178184 - 9178059
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| ||||||| || |||| | ||||||||||||||||||||||||||||||||||||    
T  9178184 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcattt 9178085  T
Q  607 ttgttgcatttttcgtcctaccccca 632  Q
    |||||||||||||| || ||||||||    
T  9178084 ttgttgcatttttcatcttaccccca 9178059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 624
Target Start/End: Original strand, 19176290 - 19176403
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19176290 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19176389  T
Q  611 tgcatttttcgtcc 624  Q
    ||||||||||||||    
T  19176390 tgcatttttcgtcc 19176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 9930202 - 9930082
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||||    
T  9930202 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgt 9930103  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  9930102 tgcatttttcgtcctaccccc 9930082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 11656455 - 11656575
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||||||||| || |||||||||    
T  11656455 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgt 11656554  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  11656555 tgcatttttcgtcctaccccc 11656575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 31133220 - 31133340
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  ||||||| ||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||    
T  31133220 ggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgt 31133319  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  31133320 tgcatttttcgtcctaccccc 31133340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 505 - 631
Target Start/End: Original strand, 12571857 - 12571983
Alignment:
Q  505 aattttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcat 604  Q
    ||||| |||||||||| | |||||||||||||||||||| ||||||| ||||||||| || || ||||||||||||||||||||||| ||||| ||||||    
T  12571857 aatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcat 12571956  T
Q  605 ttttgttgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||| ||||    
T  12571957 ttttgttgcatttttcgtcctaacccc 12571983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 514 - 628
Target Start/End: Complemental strand, 12572393 - 12572279
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| ||| |||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  12572293 atttttcgtcctacc 12572279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 11657002 - 11656885
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||| | | |||||||||||||||||| |||||||||| ||||||||||||    
T  11657002 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgt 11656903  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  11656902 tgcatttttcgtcctacc 11656885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 507 - 628
Target Start/End: Complemental strand, 31133769 - 31133648
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||| ||||||||| | |||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  31133769 tttttgcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattattt 31133670  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||| ||||    
T  31133669 ttgttgcatttttcgtcatacc 31133648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 34541093 - 34540976
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||  |||||||||| ||||||| |||||||||| ||||||||||||    
T  34541093 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgt 34540994  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  34540993 tgcatttttcgtcctacc 34540976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 44831247 - 44831364
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||| |||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  44831247 ggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgt 44831346  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  44831347 tgcatttttcgtcctacc 44831364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 505 - 631
Target Start/End: Original strand, 13224635 - 13224760
Alignment:
Q  505 aattttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcat 604  Q
    ||||||||| |||||| | |||||||| ||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||  |||||||| ||||||    
T  13224635 aattttggcataattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcat 13224733  T
Q  605 ttttgttgcatttttcgtcctaccccc 631  Q
    |||||||| ||||||||||||||||||    
T  13224734 ttttgttgaatttttcgtcctaccccc 13224760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 44831790 - 44831670
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||| | | ||||||||||||||||||||  |||||| ||||||||||||||  ||||||||||||||||||||||  ||||| ||||||||||||    
T  44831790 ggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgt 44831691  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||| |||||||||||    
T  44831690 tgcatttttggtcctaccccc 44831670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 33742922 - 33743038
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  ||||||| |||||||||| |||| |||||||||||||| |||||||| ||||| |||||||||||     
T  33742922 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttga 33743020  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  33743021 tgcatttttcgtcctacc 33743038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 513 - 624
Target Start/End: Complemental strand, 33328683 - 33328572
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||||||||||| | ||||||| |||||| ||| |||  |||||||||| |||||||||||||||||| ||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  613 catttttcgtcc 624  Q
    ||||||||||||    
T  33328583 catttttcgtcc 33328572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 10918129 - 10918246
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| |||||| |||||||||||||| |||||||| |||| ||||| |||||  |||||||||| |||||  ||||||||| |||||||||||||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||| || |||||||    
T  10918229 atttttcatcataccccc 10918246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 511 - 619
Target Start/End: Complemental strand, 11337067 - 11336959
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| |||||||||||  |||||| |||| |||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||||    
T  11337067 ggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgt 11336968  T
Q  611 tgcattttt 619  Q
    |||||||||    
T  11336967 tgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 558 - 631
Target Start/End: Complemental strand, 33743417 - 33743344
Alignment:
Q  558 tggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccc 631  Q
    |||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccc 33743344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 532 - 628
Target Start/End: Original strand, 4629818 - 4629914
Alignment:
Q  532 ctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    ||||||||||||  || ||| ||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||| |||||||||||||| ||||    
T  4629818 ctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgcatttttcgtcttacc 4629914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 4630328 - 4630217
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||| || ||||||||||| ||||||| |||| ||||||||| |||||||||||||| | ||||||||||||      ||| |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttca------attattgttgc 4630235  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||| ||||||||||    
T  4630234 atttttcatcctaccccc 4630217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 623
Target Start/End: Complemental strand, 8074096 - 8073985
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||| ||||| |||||||||||||||||||| ||| ||| |||| || || || | ||||||||||||||||||   |||||||| ||||| ||||||    
T  8074096 ggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgt 8073998  T
Q  611 tgcatttttcgtc 623  Q
    |||||||| ||||    
T  8073997 tgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 43958264 - 43958303
Alignment:
Q  590 tccttcaagtatcatttttgttgcatttttcgtcctaccc 629  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccc 43958303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 552
Target Start/End: Complemental strand, 10919731 - 10919690
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcat 552  Q
    |||||||||||| |||||||||||||||||||  ||||||||    
T  10919731 ggcttaattatacttttggtcctcgtgttttgacctactcat 10919690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 20840560 - 20840680
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20840560 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgt 20840659  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  20840660 tgcatttttcgtcctaccccc 20840680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 20841106 - 20840989
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20841106 ggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 20841007  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  20841006 tgcatttttcgtcctacc 20840989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 31778653 - 31778770
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  31778653 ggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgt 31778752  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  31778753 tgcatttttcgtcctacc 31778770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 31779197 - 31779077
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  31779197 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 31779098  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||| ||||||    
T  31779097 tgcatttttcgtcccaccccc 31779077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 507 - 631
Target Start/End: Complemental strand, 39556126 - 39556002
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  39556126 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattt 39556027  T
Q  607 ttgttgcatttttcgtcctaccccc 631  Q
    | |||||||||||||||||||||||    
T  39556026 tcgttgcatttttcgtcctaccccc 39556002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 507 - 628
Target Start/End: Complemental strand, 37727479 - 37727358
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | ||||||||||| |||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  37727479 ttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcattt 37727380  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||    
T  37727379 ttgttgcatttttcgtcctacc 37727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 24301101 - 24300981
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  24301101 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgt 24301002  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  24301001 tgcatttttcgtcctaccccc 24300981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 27393661 - 27393781
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  27393661 ggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 27393760  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  27393761 tgcatttttcgtcctaccccc 27393781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 48452989 - 48453109
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    ||||| |||| | |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  48452989 ggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 48453088  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  48453089 tgcatttttcgtcctaccccc 48453109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 32534962 - 32535076
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||||||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  32535062 atttttcgtcctacc 32535076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 507 - 632
Target Start/End: Complemental strand, 32535512 - 32535382
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatc---- 602  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||        
T  32535512 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatta 32535413  T
Q  603 -atttttgttgcatttttcgtcctaccccca 632  Q
     ||||||||||||||||||||||||||||||    
T  32535412 aatttttgttgcatttttcgtcctaccccca 32535382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 510 - 631
Target Start/End: Original strand, 29801355 - 29801476
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||| |||||||||||  ||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29801355 tggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 29801454  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    |||||||||||||| |||||||    
T  29801455 ttgcatttttcgtcttaccccc 29801476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 39555578 - 39555695
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  39555578 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgt 39555677  T
Q  611 tgcatttttcgtcctacc 628  Q
    |||||||||||| |||||    
T  39555678 tgcatttttcgttctacc 39555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 43973985 - 43973868
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  43973985 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 43973886  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  43973885 tgcatttttcgtcctacc 43973868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 23644462 - 23644582
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||| |||||| ||||||| |||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  23644462 ggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgt 23644561  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  23644562 tgcatttttcgtcctaccccc 23644582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 37726929 - 37727049
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||||| || | ||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  37726929 ggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 37727028  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  37727029 tgcatttttcgtcctaccccc 37727049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 4275909 - 4275792
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||  |||||||||||||||||||||||||| || ||||||||||||    
T  4275909 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgt 4275810  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  4275809 tgcatttttcgtcctacc 4275792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 5136983 - 5137100
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| | ||||| |||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  5137083 atttttcgtcctaccccc 5137100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 17464491 - 17464608
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||| ||  |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17464491 ggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 17464590  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  17464591 tgcatttttcgtcctacc 17464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 23645010 - 23644893
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||| ||||||| || ||||||||||||||||||||||| ||||| ||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  611 tgcatttttcgtcctacc 628  Q
    |||||||||| |||||||    
T  23644910 tgcatttttcatcctacc 23644893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 632
Target Start/End: Complemental strand, 27394122 - 27394001
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  27394122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgt 27394023  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    |||||||| | |||||||||||    
T  27394022 tgcattttccatcctaccccca 27394001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 41046703 - 41046820
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||| | | |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  41046803 atttttcgtcctaccccc 41046820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 511 - 626
Target Start/End: Complemental strand, 5137526 - 5137411
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||| ||||||||||||    
T  5137526 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 5137427  T
Q  611 tgcatttttcgtccta 626  Q
    ||||||||| ||||||    
T  5137426 tgcatttttagtccta 5137411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 510 - 628
Target Start/End: Original strand, 25853233 - 25853351
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||| ||||||| |||| ||||| |||| |||||||| |||||||||||||||||||| |||||||||||    
T  25853233 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttg 25853332  T
Q  610 ttgcatttttcgtcctacc 628  Q
    ||||||||||||| |||||    
T  25853333 ttgcatttttcgttctacc 25853351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 513 - 631
Target Start/End: Complemental strand, 25853770 - 25853652
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||| ||||||||||||| |||||||| |||||||||| || | |||||||||||||||||| |||||||||| ||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  25853670 catttttcgtcctaccccc 25853652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 26274570 - 26274684
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| ||||||| |||| || |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||| ||||    
T  26274670 atttttcgtcatacc 26274684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 506 - 624
Target Start/End: Complemental strand, 29801966 - 29801848
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | ||||| ||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  29801966 atttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatt 29801867  T
Q  606 tttgttgcatttttcgtcc 624  Q
    |||||||||||||||||||    
T  29801866 tttgttgcatttttcgtcc 29801848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 30098308 - 30098191
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||   |||||| |||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||    
T  30098308 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 30098209  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  30098208 tgcatttttcgtcctacc 30098191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 30104482 - 30104603
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  ||||||| |||| |||||||||| |||||||||| || | ||||||||||||| ||||||||||||    
T  30104482 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgt 30104581  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||    
T  30104582 tgcatttttcgtcctaccccca 30104603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 43973441 - 43973561
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  ||||||| |||| || |  |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccc 43973561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 17465037 - 17464916
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||||   || |||||||| |||||||||||||||||||| ||||||||||||    
T  17465037 ggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgt 17464938  T
Q  611 tgcat-ttttcgtcctaccccc 631  Q
    ||||| |||| |||||||||||    
T  17464937 tgcatttttttgtcctaccccc 17464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 515 - 631
Target Start/End: Complemental strand, 22425354 - 22425238
Alignment:
Q  515 taattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgca 614  Q
    |||||| | ||||||||||||||||| || ||||||| ||| |||||| |||| || ||||||||||||||||||| |||||| ||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  615 tttttcgtcctaccccc 631  Q
    |||||||||||||||||    
T  22425254 tttttcgtcctaccccc 22425238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 26837900 - 26837781
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | ||||||||| ||||| ||| |||| |||||||||||||| ||||||||||||||||||    
T  26837900 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgt 26837802  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||| |||||||||||    
T  26837801 tgcattttttgtcctaccccc 26837781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 512 - 632
Target Start/End: Complemental strand, 32697244 - 32697124
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    |||||||||||||||||||||||||||||| | ||||||| |||| | |||  ||| ||||||||||||||||||  || |||||| |||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  612 gcatttttcgtcctaccccca 632  Q
    |||||||||||||||||||||    
T  32697144 gcatttttcgtcctaccccca 32697124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 26837363 - 26837477
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| |||||||||||| || |||||| ||||||| |||| |||||||||| ||||| |||| ||| |||||||||||||| |||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  26837463 atttttcgtcctacc 26837477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 22424814 - 22424931
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||| |||||||||  | ||||| | ||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  22424814 ggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22424913  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  22424914 tgcatttttcgtcctacc 22424931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 25612519 - 25612402
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||  ||||||| |||| |||||||||| |||||||| |||||||||| ||| || || |||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  25612419 atttttcgtcctaccccc 25612402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 26275108 - 26274992
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||||| |||||| ||| ||||||||  ||||||| |||||||||||| || ||||||||||||| |||||||||| |||| |||||||||||||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  614 atttttcgtcctaccccc 631  Q
     |||||||||||||||||    
T  26275008 -tttttcgtcctaccccc 26274992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 512 - 625
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||  |||||||   |||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  612 gcatttttcgtcct 625  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 509 - 628
Target Start/End: Complemental strand, 23228554 - 23228436
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | ||||||||| |||||||||| ||||||| |||| || || |||| ||||||||| ||||||||  ||||||||| ||||||||||    
T  23228554 ttggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcattttt 23228456  T
Q  609 gttgcatttttcgtcctacc 628  Q
     |||||||||||||||||||    
T  23228455 attgcatttttcgtcctacc 23228436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 514 - 624
Target Start/End: Original strand, 24300560 - 24300669
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| |||||||||| |||||||||||  || ||| ||||||||||||| | ||||||||||||| |||||||| |||||| |||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  614 atttttcgtcc 624  Q
    | |||||||||    
T  24300659 aattttcgtcc 24300669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 510 - 631
Target Start/End: Complemental strand, 50116955 - 50116834
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | ||||| |||||||||||||   |||||| |||| ||||| |||| |||| ||| |||||||||||||| ||||  |||||||||||    
T  50116955 tggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttg 50116856  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||| ||||||||||||||||    
T  50116855 ttgcaattttcgtcctaccccc 50116834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 511 - 632
Target Start/End: Complemental strand, 51474879 - 51474758
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||| | ||||||||||  |||||| |||| ||||| |||| |||||||||| |||||||  |||||| |  ||||||||||||    
T  51474879 ggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgt 51474780  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||||||||||||    
T  51474779 tgcatttttcgtcctaccccca 51474758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 536 - 628
Target Start/End: Complemental strand, 41047218 - 41047127
Alignment:
Q  536 tgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    |||||||| ||||||| ||||||||| ||| | ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacc 41047127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 625
Target Start/End: Complemental strand, 18010271 - 18010176
Alignment:
Q  530 tcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcct 625  Q
    ||||| |||||| ||||||||| |||| |||| | ||| ||||||||||||||||||  ||  ||||| |||||||||||||||||||||||||||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 597
Target Start/End: Complemental strand, 37222116 - 37222030
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaa 597  Q
    |||||||||| | |||||||||||||||||||  |||||||  ||| |||||||||| |||||||||||||||||||  ||||||||    
T  37222116 ggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 45965938 - 45966058
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||  |||||| |||  |  ||||||  |||||||||| |||||||  ||||||| | |||||||| |||    
T  45965938 ggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgt 45966037  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||| ||| ||||    
T  45966038 tgcatttttcgttctaacccc 45966058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 629
Target Start/End: Original strand, 37220557 - 37220675
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||| |||||| |||||||  | |  | || |||  ||||||||||||| ||||  ||||||||  ||||||||||||    
T  37220557 ggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgt 37220656  T
Q  611 tgcatttttcgtcctaccc 629  Q
    |||| ||||||||||||||    
T  37220657 tgcacttttcgtcctaccc 37220675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 631
Target Start/End: Complemental strand, 25420684 - 25420566
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||| || |||| |||||  ||||||| |||| || ||  ||| |||||||| |||| ||||  ||||||||| ||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  613 catttttcgtcctaccccc 631  Q
    ||||||||||| |||||||    
T  25420584 catttttcgtcataccccc 25420566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 608
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtcc-ttcaagtatcattttt 608  Q
    |||| |||||| |||||||| ||||||||| |  |||||| |||| | || ||||| ||||||||||||||||||| |||| ||||| ||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 625
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| ||||||||||||| | |||||| ||||| | |||| || |  || ||||||||||||||||||||  ||||| | | ||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  614 atttttcgtcct 625  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 9e-47; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 511 - 630
Target Start/End: Complemental strand, 18183514 - 18183395
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18183514 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18183415  T
Q  611 tgcatttttcgtcctacccc 630  Q
    ||||||||||||||||||||    
T  18183414 tgcatttttcgtcctacccc 18183395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 509 - 631
Target Start/End: Complemental strand, 5819476 - 5819354
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  5819476 ttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 5819377  T
Q  609 gttgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||||    
T  5819376 gttgcatttttcgtcctaccccc 5819354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 510 - 631
Target Start/End: Original strand, 8647437 - 8647558
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  8647437 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttg 8647536  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||    
T  8647537 ttgcatttttcgtcctaccccc 8647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 2865300 - 2865180
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2865300 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 2865201  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    | |||||||||||||||||||    
T  2865200 ttcatttttcgtcctaccccc 2865180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 24362381 - 24362261
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24362381 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgt 24362282  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  24362281 tgcatttttcgtcctaccccc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 29455287 - 29455167
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  29455287 ggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 29455188  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  29455187 tgcatttttcgtcctaccccc 29455167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 510 - 631
Target Start/End: Original strand, 19359135 - 19359256
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  19359135 tggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttg 19359234  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||    
T  19359235 ttgcatttttcgtcctaccccc 19359256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 19359681 - 19359564
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19359681 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19359582  T
Q  611 tgcatttttcgtcctacc 628  Q
    || |||||||||||||||    
T  19359581 tggatttttcgtcctacc 19359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 8647983 - 8647866
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  8647983 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 8647884  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||| ||||    
T  8647883 tgcatttttcgtcatacc 8647866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 514 - 619
Target Start/End: Complemental strand, 15372415 - 15372310
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  614 attttt 619  Q
    ||||||    
T  15372315 attttt 15372310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 623
Target Start/End: Complemental strand, 14215788 - 14215676
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||  ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14215788 ggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 14215689  T
Q  611 tgcatttttcgtc 623  Q
    |||||||||||||    
T  14215688 tgcatttttcgtc 14215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 505 - 632
Target Start/End: Original strand, 15708965 - 15709092
Alignment:
Q  505 aattttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcat 604  Q
    ||||| |||||||||| | |||||||||| ||||||||| ||||||| |||||||||  |||| ||||||||||||||||||||||||||||| ||||||    
T  15708965 aatttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcat 15709064  T
Q  605 ttttgttgcatttttcgtcctaccccca 632  Q
    ||||||||||| ||||||||||||||||    
T  15709065 ttttgttgcatatttcgtcctaccccca 15709092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 5818932 - 5819046
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||| ||||    
T  5819032 atttttcgtcttacc 5819046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 18182973 - 18183087
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||| ||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  18183073 atttttcgtcctacc 18183087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 8461476 - 8461359
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||     
T  8461476 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgc 8461377  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||| ||||    
T  8461376 tgcatttttcgtcatacc 8461359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 164736 - 164616
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| ||||| ||||| |||||||| | |||||  ||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  164736 ggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 164637  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||| |||||||||||    
T  164636 tgcattttttgtcctaccccc 164616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 8460930 - 8461050
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||  | |||||||| |||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  8460930 ggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 8461029  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||||||| |||||||    
T  8461030 tgcatttttcgtcataccccc 8461050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 511 - 626
Target Start/End: Original strand, 24331559 - 24331676
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatc--attttt 608  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||   |||||    
T  24331559 ggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatttttt 24331658  T
Q  609 gttgcatttttcgtccta 626  Q
    |||||||||||| |||||    
T  24331659 gttgcatttttcatccta 24331676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 507 - 628
Target Start/End: Original strand, 2864750 - 2864871
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    ||||| |||||||| | |||||||||| ||||||||| ||||||| |||| || || |||| |||||||||| |||||||||||||||||| ||||||||    
T  2864750 ttttgacttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcattt 2864849  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||    
T  2864850 ttgttgcatttttcgtcctacc 2864871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 509 - 628
Target Start/End: Original strand, 164189 - 164307
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | |||||||||||||||||||  ||||||| ||||||||||||||| ||||| |||| |||||||||||| ||||| ||||| ||||    
T  164189 ttggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-tttt 164287  T
Q  609 gttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||    
T  164288 gttgcatttttcgtcctacc 164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 510 - 631
Target Start/End: Original strand, 7348558 - 7348679
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| ||||||||||||| |||||| ||||||||| |||| ||||| |||| |||||||||||||||||||  ||||||   |||||||||||    
T  7348558 tggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttg 7348657  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||| ||||||||||||||||    
T  7348658 ttgcacttttcgtcctaccccc 7348679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 510 - 631
Target Start/End: Complemental strand, 7349563 - 7349442
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||| |||||||||  |||||||||| ||||||||  |||||||  |||||||||||    
T  7349563 tggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttg 7349464  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||| ||||| ||||||||||    
T  7349463 ttgcacttttcatcctaccccc 7349442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 508 - 624
Target Start/End: Original strand, 15371868 - 15371983
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttt 607  Q
    |||| |||||||| | ||||| ||||||| |||||||||||||| |||  |||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  15371868 tttgacttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 15371966  T
Q  608 tgttgcatttttcgtcc 624  Q
    |||||||||||||||||    
T  15371967 tgttgcatttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 513 - 628
Target Start/End: Original strand, 14215243 - 14215358
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||||||||||||||||||  |||||| |||||||||  | || |||||||||||||||||| |||||||||  ||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  613 catttttcgtcctacc 628  Q
    ||||||||||||||||    
T  14215343 catttttcgtcctacc 14215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 524 - 631
Target Start/End: Original strand, 24361850 - 24361957
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    ||||||||| | |||||||| |||| || ||||||| || |||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24361850 ttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatttttcgtc 24361949  T
Q  624 ctaccccc 631  Q
    ||||||||    
T  24361950 ctaccccc 24361957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 507 - 628
Target Start/End: Complemental strand, 15709517 - 15709397
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||| | ||||||||| |||||||||||||| ||| |||| ||| |||||||||||||||||||||| |  ||||||||    
T  15709517 ttttggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcattt 15709419  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
     |||||||||||||||||||||    
T  15709418 ctgttgcatttttcgtcctacc 15709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 29454740 - 29454857
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||  | |||||||| | ||||||||| ||||||| |||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||     
T  29454740 ggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttgc 29454839  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  29454840 tgcatttttcgtcctacc 29454857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 512 - 632
Target Start/End: Complemental strand, 4222266 - 4222146
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||||||||||||||||||| || |||| |||| ||||| |||| ||||||||||||||||||  ||| ||||  |||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  612 gcatttttcgtcctaccccca 632  Q
    |||||||||||||||||||||    
T  4222166 gcatttttcgtcctaccccca 4222146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 524 - 631
Target Start/End: Original strand, 24325225 - 24325332
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    ||||||||| | |||||||| |||| || ||||||| || |||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  24325225 ttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatttttcgtc 24325324  T
Q  624 ctaccccc 631  Q
    ||||||||    
T  24325325 ctaccccc 24325332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 508 - 632
Target Start/End: Original strand, 4219660 - 4219784
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttt 607  Q
    ||||||||||||| | ||||| |||||||||||||| ||| | |  ||| ||||| ||||||||||||||||||||||   |||||| |  |||||||||    
T  4219660 tttggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttt 4219759  T
Q  608 tgttgcatttttcgtcctaccccca 632  Q
    |||||||||||||||||||||||||    
T  4219760 tgttgcatttttcgtcctaccccca 4219784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 510 - 630
Target Start/End: Original strand, 4623147 - 4623267
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||| ||||||||||   |||||| |||| ||||||||||| |||||||||||||||||  ||||||||| ||||||||||     
T  4623147 tggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcattttta 4623246  T
Q  610 ttgcatttttcgtcctacccc 630  Q
    | ||||||| |||||||||||    
T  4623247 tggcattttccgtcctacccc 4623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 630
Target Start/End: Complemental strand, 14464065 - 14463946
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||| ||||||||||||||| ||||||| ||||||  |  || | |||||||| ||||||||||| |||||||| |||||||||| |    
T  14464065 ggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttat 14463966  T
Q  611 tgcatttttcgtcctacccc 630  Q
    ||||||||||||||||||||    
T  14463965 tgcatttttcgtcctacccc 14463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 512 - 629
Target Start/End: Original strand, 6018315 - 6018431
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| ||||||||| ||||||||||| |||||||| |||||||||| || | ||||||||||||||||||   | |||||| |||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  612 gcatttttcgtcctaccc 629  Q
    ||| |||| |||||||||    
T  6018414 gcagttttagtcctaccc 6018431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 16018589 - 16018709
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| ||||||||||| ||| ||| |||| || || |||| |||||||| |||||||||||||||||||| ||| |||||| |    
T  16018589 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttttat 16018687  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    |||||||| |||||||||||||    
T  16018688 tgcattttccgtcctaccccca 16018709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 511 - 624
Target Start/End: Complemental strand, 25000634 - 25000521
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| || |||||||| ||||||| |||| ||||| ||   |||||||||||||||||| |||| ||||| ||||||||||||    
T  25000634 ggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgt 25000535  T
Q  611 tgcatttttcgtcc 624  Q
    ||||||||||||||    
T  25000534 tgcatttttcgtcc 25000521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 523 - 631
Target Start/End: Complemental strand, 24332096 - 24331985
Alignment:
Q  523 tttttggtcctcgtgttttggtctactcatgaaactggtcctgccttttt-aaaacagaacaaaacggtccttcaagtatca-tttttgttgca-ttttt 619  Q
    ||||||||| || ||||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| |||||    
T  24332096 tttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcatttttt 24331997  T
Q  620 cgtcctaccccc 631  Q
    ||||||||||||    
T  24331996 cgtcctaccccc 24331985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 514 - 628
Target Start/End: Complemental strand, 16019129 - 16019015
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||| ||||||||  |||||| |||| |||||||||  |||||||| |||| |||| ||| |||||| ||||||||||||||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  16019029 atttttcgtcctacc 16019015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 631
Target Start/End: Complemental strand, 4624758 - 4624650
Alignment:
Q  523 tttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgt 622  Q
    ||||| |||||||||||||   ||||||| |||| ||||| || || ||||||||| ||||||||  || ||||| |||||||| |||||||||||||||    
T  4624758 tttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgt 4624659  T
Q  623 cctaccccc 631  Q
    |||||||||    
T  4624658 cctaccccc 4624650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 517 - 628
Target Start/End: Complemental strand, 6019309 - 6019198
Alignment:
Q  517 attatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcat- 615  Q
    |||| |||||||||| || |||||||| ||||||| ||||||| || |||  ||||||||||||||||||| ||| || || |||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttgg-ctactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  616 ttttcgtcctacc 628  Q
    |||||||||||||    
T  6019210 ttttcgtcctacc 6019198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 631
Target Start/End: Original strand, 25000112 - 25000210
Alignment:
Q  533 tcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||| ||||||| |||  ||||| |||| | ||||||||||| |||| ||||||| || |||||||||| |||||||||| |||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccccc 25000210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 593 - 632
Target Start/End: Complemental strand, 13814190 - 13814151
Alignment:
Q  593 ttcaagtatcatttttgttgcatttttcgtcctaccccca 632  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctaccccca 13814151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 593 - 628
Target Start/End: Original strand, 14462686 - 14462721
Alignment:
Q  593 ttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacc 14462721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 9e-47; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 517 - 632
Target Start/End: Original strand, 3025472 - 3025587
Alignment:
Q  517 attatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 616  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  617 tttcgtcctaccccca 632  Q
    ||||||||||||||||    
T  3025572 tttcgtcctaccccca 3025587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 28847240 - 28847123
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||    
T  28847240 ggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgt 28847141  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  28847140 tgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 22374320 - 22374440
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  22374320 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22374419  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  22374420 tgcatttttcgtcctaccccc 22374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 26538624 - 26538504
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  26538624 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgt 26538525  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  26538524 tgcatttttcgtcctaccccc 26538504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 507 - 631
Target Start/End: Original strand, 28616609 - 28616733
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  28616609 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattt 28616708  T
Q  607 ttgttgcatttttcgtcctaccccc 631  Q
    |||||||| ||||||||||||||||    
T  28616709 ttgttgcaattttcgtcctaccccc 28616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 11090524 - 11090641
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  11090624 atttttcgtcctaccccc 11090641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 239353 - 239472
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  239353 ggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgt 239451  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  239452 tgcatttttcgtcctaccccc 239472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 511 - 625
Target Start/End: Original strand, 1978108 - 1978222
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  1978108 ggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1978207  T
Q  611 tgcatttttcgtcct 625  Q
    ||||||||| |||||    
T  1978208 tgcattttttgtcct 1978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 7446342 - 7446463
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||| |    
T  7446342 ggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttat 7446441  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    ||||||||||||| ||||||||    
T  7446442 tgcatttttcgtcataccccca 7446463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 7446891 - 7446774
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| ||||||| |||||||||||||   |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  7446891 ggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 7446792  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  7446791 tgcatttttcgtcctacc 7446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 22374870 - 22374753
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  22374870 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22374771  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  22374770 tgcatttttcgtcctacc 22374753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 510 - 631
Target Start/End: Original strand, 43058332 - 43058453
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | ||||| |||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43058332 tggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 43058431  T
Q  610 ttgcatttttcgtcctaccccc 631  Q
    ||||||||||||| ||||||||    
T  43058432 ttgcatttttcgttctaccccc 43058453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 20444749 - 20444869
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  20444749 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgt 20444848  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||| ||||||||||||||||    
T  20444849 tgcagttttcgtcctaccccc 20444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 26538097 - 26538217
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||||||||||||  |||||| ||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  26538097 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgt 26538196  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  26538197 tgcatttttcgtcctaccccc 26538217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 511 - 629
Target Start/End: Original strand, 40027140 - 40027258
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| ||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  40027140 ggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 40027239  T
Q  611 tgcatttttcgtcctaccc 629  Q
    ||||||||| |||||||||    
T  40027240 tgcattttttgtcctaccc 40027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 514 - 628
Target Start/End: Complemental strand, 40027682 - 40027568
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  40027582 atttttcgtcctacc 40027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 14432145 - 14432262
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||| |||| |||||||| | |||||||||||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  614 atttttcgtcctaccccc 631  Q
    |||||| |||||||||||    
T  14432245 atttttggtcctaccccc 14432262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 18450830 - 18450947
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |    
T  18450830 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttt 18450929  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||| ||||||||    
T  18450930 tgcatttttagtcctacc 18450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 40815887 - 40815770
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||||||  |||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  40815787 atttttcgtcctaccccc 40815770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 18451376 - 18451256
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||||||    
T  18451376 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgt 18451277  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||| ||||||||||    
T  18451276 tgcatttttcttcctaccccc 18451256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 508 - 628
Target Start/End: Original strand, 40815342 - 40815462
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttt 607  Q
    |||| |||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| |||||||||| ||||||||||| |||||| |||||||||    
T  40815342 tttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttt 40815441  T
Q  608 tgttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||||    
T  40815442 tgttgcatttttcgtcctacc 40815462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 511 - 626
Target Start/End: Complemental strand, 11091065 - 11090950
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  11091065 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgt 11090966  T
Q  611 tgcatttttcgtccta 626  Q
    || |||||||||||||    
T  11090965 tgtatttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 1978654 - 1978537
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||| ||||||||| ||||||| |||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  1978654 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgt 1978555  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||| ||||||||    
T  1978554 tgcattttttgtcctacc 1978537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 28617159 - 28617042
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||| ||| | |||||||||||||||||| |||||||||| ||||||||||||    
T  28617159 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgt 28617060  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||| ||||    
T  28617059 tgcatttttcgtcttacc 28617042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 20440576 - 20440456
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  20440576 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgt 20440477  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||| ||||||||||| ||||    
T  20440476 tgcagttttcgtcctatcccc 20440456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 513 - 628
Target Start/End: Complemental strand, 14432684 - 14432569
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||| ||| |||||| ||| ||||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  613 catttttcgtcctacc 628  Q
    |||||||| |||||||    
T  14432584 catttttcatcctacc 14432569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 514 - 632
Target Start/End: Complemental strand, 8425902 - 8425784
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||| || ||||||||||||||||| |||| |||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  614 atttttcgtcctaccccca 632  Q
    |||||||||| ||||||||    
T  8425802 atttttcgtcttaccccca 8425784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 509 - 631
Target Start/End: Original strand, 35779706 - 35779828
Alignment:
Q  509 ttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||||| | |||||||||||||||||||   |||||| |||| |||||||||| ||||||||||||||||||  ||||||||| ||||||||||    
T  35779706 ttggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcattttt 35779805  T
Q  609 gttgcatttttcgtcctaccccc 631  Q
    ||||||||||| |||||||||||    
T  35779806 gttgcattttttgtcctaccccc 35779828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 506 - 628
Target Start/End: Complemental strand, 43058882 - 43058761
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | ||||| |||||||||||||| ||||||| ||||||||||||||  |||||||||||||||||| |||||||||| ||||| |    
T  43058882 atttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-t 43058784  T
Q  606 tttgttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||||||    
T  43058783 tttgttgcatttttcgtcctacc 43058761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 524 - 628
Target Start/End: Complemental strand, 239884 - 239780
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    |||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  239884 ttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgtttttcgtc 239785  T
Q  624 ctacc 628  Q
     ||||    
T  239784 atacc 239780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 512 - 631
Target Start/End: Complemental strand, 35781207 - 35781088
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | ||||| |||||||||||||| ||||||| |||| ||||| |||| |||||||||||||||||||  |||||||| |||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  612 gcatttttcgtcctaccccc 631  Q
    ||||||||||||||| ||||    
T  35781107 gcatttttcgtcctaacccc 35781088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 507 - 628
Target Start/End: Complemental strand, 3026010 - 3025891
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| ||||| ||||||||||||||||  |||||| |||| |||| ||||| |||||||||| |||||||||||||||||| ||| ||||    
T  3026010 ttttggcttaattacatttt-ggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattattt 3025913  T
Q  607 ttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||||||||||    
T  3025912 ttgttgcatttttcgtcctacc 3025891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 513 - 629
Target Start/End: Original strand, 15551501 - 15551617
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||||||||||||||||||| |||||| |||| ||||| ||||||||||||||| |||||||  ||||||||  ||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  613 catttttcgtcctaccc 629  Q
    |||||||||||| ||||    
T  15551601 catttttcgtccaaccc 15551617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 8425358 - 8425471
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||| ||||||||| ||||||| |||| ||||| | ||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  614 atttttcgtcctacc 628  Q
    |||||||||||||||    
T  8425457 atttttcgtcctacc 8425471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 8972239 - 8972357
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | ||||||||||||||||||||  | |||| |||| ||||| |||| ||| ||||||||||||||  ||| ||||| ||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||| ||||||||    
T  8972339 catttttcgttctaccccc 8972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 513 - 629
Target Start/End: Complemental strand, 15552596 - 15552481
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||| |  |||||||| ||||||| |||| || ||| ||| ||||||||||||||||||  ||| ||||| ||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  613 catttttcgtcctaccc 629  Q
     ||||||||||||||||    
T  15552497 tatttttcgtcctaccc 15552481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 433
Target Start/End: Original strand, 27564420 - 27564448
Alignment:
Q  405 acttttttaaaacaaaataatcacttttg 433  Q
    |||||||||||||||||||||||||||||    
T  27564420 acttttttaaaacaaaataatcacttttg 27564448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 93; Significance: 6e-45; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 4793 - 4913
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4793 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 4892  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  4893 tgcatttttcgtcctaccccc 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 513 - 625
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||||||||||||||| ||| ||| |||||||||| || | ||||||||||||| ||||||||  ||||| ||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  613 catttttcgtcct 625  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 6e-45; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 19590525 - 19590645
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||| ||||||||||    
T  19590625 tgcatttttcatcctaccccc 19590645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 19591070 - 19590953
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19591070 ggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590971  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  19590970 tgcatttttcgtcctacc 19590953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 19830423 - 19830540
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  19830523 atttttcgtcctaccccc 19830540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 34534336 - 34534216
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| ||||||| |||||||||||| ||||||| ||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  34534336 ggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgt 34534237  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  34534236 tgcatttttcgtcctaccccc 34534216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 37786767 - 37786887
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  37786767 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 37786866  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  37786867 tgcatttttcgtcctaccccc 37786887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 523 - 628
Target Start/End: Original strand, 29099862 - 29099967
Alignment:
Q  523 tttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgt 622  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29099862 tttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgt 29099961  T
Q  623 cctacc 628  Q
    ||||||    
T  29099962 cctacc 29099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 37787312 - 37787195
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||||||||||||| |||||| ||||||||||||    
T  37787312 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgt 37787213  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  37787212 tgcatttttcgtcctacc 37787195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 38859186 - 38859069
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  38859186 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgt 38859087  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  38859086 tgcatttttcgtcctacc 38859069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 35289446 - 35289326
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||    
T  35289446 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggt 35289347  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||||||| |||||||    
T  35289346 tgcatttttcgtcataccccc 35289326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 508 - 627
Target Start/End: Original strand, 35288900 - 35289019
Alignment:
Q  508 tttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttt 607  Q
    ||||||||||||| | |||||||| |||| |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  35288900 tttggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 35288999  T
Q  608 tgttgcatttttcgtcctac 627  Q
    ||||||||||||||||||||    
T  35289000 tgttgcatttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 517 - 631
Target Start/End: Complemental strand, 23953268 - 23953154
Alignment:
Q  517 attatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 616  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  617 tttcgtcctaccccc 631  Q
    ||||||| |||||||    
T  23953168 tttcgtcataccccc 23953154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 29100393 - 29100276
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  614 atttttcgtcctaccccc 631  Q
    |||||| |||||||||||    
T  29100293 attttttgtcctaccccc 29100276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 2659385 - 2659265
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||| ||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  2659385 ggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 2659286  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||| ||||||||||    
T  2659285 tgcatttttcatcctaccccc 2659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 505 - 627
Target Start/End: Complemental strand, 32005165 - 32005043
Alignment:
Q  505 aattttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcat 604  Q
    |||||||||||||||| | ||||||||||| ||||||||  |||||| |||||||||| |||| |||||||| ||||||||||||||||| || ||||||    
T  32005165 aattttggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcat 32005066  T
Q  605 ttttgttgcatttttcgtcctac 627  Q
    |||||||||||||||||||||||    
T  32005065 ttttgttgcatttttcgtcctac 32005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 2658839 - 2658956
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||||    
T  2658839 ggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 2658938  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||| ||||    
T  2658939 tgcatttttcgtcatacc 2658956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 32004614 - 32004731
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||| || ||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  32004614 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 32004713  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||| ||||||    
T  32004714 tgcatttttcgccctacc 32004731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 38858643 - 38858763
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||| | | ||||||||||||||||||||  |||||| ||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||||||    
T  38858643 ggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgt 38858742  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||| |||||||||||    
T  38858743 tgcatttttggtcctaccccc 38858763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 4641443 - 4641560
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||||||||||||  |||||| ||||||||||||||  |||| ||||| |||||||||||| ||||| |||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  4641543 atttttcgtcctaccccc 4641560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 28583439 - 28583559
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| |||||||||| | |||| ||||| |||||||||| || ||||| ||||||||| |||||||||| |    
T  28583439 ggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttat 28583538  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  28583539 tgcatttttcgtcctaccccc 28583559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 23952730 - 23952848
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtc-tactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    |||||||||| | |||||||||||||||||||  | |||||| |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||| |    
T  23952730 ggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 23952829  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  23952830 ttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 19830964 - 19830848
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| |||||||  |||||||||||| | |||||||||| ||||||||||| |||||| ||||||||||||    
T  19830964 ggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgt 19830865  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||| ||||||||    
T  19830864 tgcattttt-gtcctacc 19830848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 34533791 - 34533908
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||||| |||||||||| |||  ||||||||||||| |||| |||| ||||| ||||||||||||    
T  34533791 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgt 34533890  T
Q  611 tgcatttttcgtcctacc 628  Q
    |||||||| |||||||||    
T  34533891 tgcattttccgtcctacc 34533908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 514 - 627
Target Start/End: Complemental strand, 4641983 - 4641873
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||| |||||||    |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  614 atttttcgtcctac 627  Q
    || |||||||||||    
T  4641886 atatttcgtcctac 4641873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 506 - 627
Target Start/End: Original strand, 38160946 - 38161067
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | |||||||||||| ||||||| ||||||| |||| |  ||||||| ||||||||||||||||||  ||||||||| ||| |||    
T  38160946 atttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatt 38161045  T
Q  606 tttgttgcatttttcgtcctac 627  Q
    ||||||||||||||||||||||    
T  38161046 tttgttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 524 - 623
Target Start/End: Complemental strand, 4478232 - 4478133
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||||||| || |  ||||||||| |||||||||||||||||||||||||    
T  4478232 ttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgcatttttcgtc 4478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 512 - 631
Target Start/End: Complemental strand, 28584466 - 28584347
Alignment:
Q  512 gcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 611  Q
    ||||||||| | |||| ||||||||| ||||| ||| ||| |||| ||||| || | ||||||||||||||||||  ||||||||| |||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  612 gcatttttcgtcctaccccc 631  Q
    | |||||||||| |||||||    
T  28584366 gtatttttcgtcttaccccc 28584347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 530 - 629
Target Start/End: Original strand, 10640 - 10739
Alignment:
Q  530 tcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccc 629  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 510 - 628
Target Start/End: Complemental strand, 11169 - 11051
Alignment:
Q  510 tggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttg 609  Q
    ||||||||||| | |||||||||||||||||||| ||||| | ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  11169 tggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 11070  T
Q  610 ttgcatttttcgtcctacc 628  Q
    |||||||||||||||||||    
T  11069 ttgcatttttcgtcctacc 11051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 506 - 632
Target Start/End: Complemental strand, 42708 - 42582
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||  |||||||    
T  42708 atttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatt 42609  T
Q  606 tttgttgcatttttcgtcctaccccca 632  Q
    |||||| ||||||||||||||||||||    
T  42608 tttgtttcatttttcgtcctaccccca 42582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 42172 - 42286
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||| || |||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  614 atttttcgtcctacc 628  Q
    |||||| ||| ||||    
T  42272 attttttgtcatacc 42286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 506 - 628
Target Start/End: Complemental strand, 1291 - 1169
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    ||||||||||||||| | |||| |||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  1291 attttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 1192  T
Q  606 tttgttgcatttttcgtcctacc 628  Q
    |||||||||| ||||||||||||    
T  1191 tttgttgcatctttcgtcctacc 1169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 755 - 872
Alignment:
Q  513 cttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 612  Q
    |||||||| | |||||||| ||||||||||| ||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  613 catttttcgtcctaccccc 631  Q
    |||||||||||||||||||    
T  854 catttttcgtcctaccccc 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 514 - 632
Target Start/End: Complemental strand, 10414 - 10296
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||  | || ||||||||||||||||||||||||||||| |||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  614 atttttcgtcctaccccca 632  Q
    |||||||||||||||||||    
T  10314 atttttcgtcctaccccca 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 514 - 618
Target Start/End: Original strand, 9935 - 10039
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| |||||||||||||||||||| | ||| ||| ||||||| || |||| |||||| | ||||||||| |||||||||| ||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  614 atttt 618  Q
    |||||    
T  10035 atttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 86; Significance: 9e-41; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 511 - 628
Target Start/End: Complemental strand, 2212 - 2095
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  2212 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 2113  T
Q  611 tgcatttttcgtcctacc 628  Q
    ||||||||||||||||||    
T  2112 tgcatttttcgtcctacc 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 1667 - 1787
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||    
T  1667 ggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgt 1766  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  1767 tgcatttttcgtcctaccccc 1787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 4752 - 4632
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||| |||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  4752 ggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgt 4653  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    |||||||||||||||||||||    
T  4652 tgcatttttcgtcctaccccc 4632  T

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Target: scaffold0273; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 553 - 628
Target Start/End: Original strand, 4245 - 4320
Alignment:
Q  553 gaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc 628  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  4245 gaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacc 4320  T

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Target: scaffold0019 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 506 - 631
Target Start/End: Complemental strand, 134223 - 134098
Alignment:
Q  506 attttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatt 605  Q
    |||| |||||||||| | |||||||||||||||||||| ||||||| |||||| ||| |||| |||||| ||||||||||||| |||||||| || ||||    
T  134223 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatt 134124  T
Q  606 tttgttgcatttttcgtcctaccccc 631  Q
    ||||||||||||||||||||||||||    
T  134123 tttgttgcatttttcgtcctaccccc 134098  T

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Target: scaffold0007 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 631
Target Start/End: Original strand, 64302 - 64422
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    |||||||||| | |||||||||||||||||||   |||||| ||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  64302 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgt 64401  T
Q  611 tgcatttttcgtcctaccccc 631  Q
    ||||||||||||| |||||||    
T  64402 tgcatttttcgtcataccccc 64422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 514 - 626
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||||||||||||||||||  |||||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  614 atttttcgtccta 626  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 608
Target Start/End: Complemental strand, 210883 - 210786
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 608  Q
    |||||||||| | |||||||||||   |||||  | |||||||||| ||||||||||| ||| |||  ||||||||| |||| | || ||||||||||    
T  210883 ggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcattttt 210786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 507 - 608
Target Start/End: Complemental strand, 19170 - 19069
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  19170 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19071  T
Q  607 tt 608  Q
    ||    
T  19070 tt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 632
Target Start/End: Original strand, 18835 - 18956
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgt 610  Q
    ||||| |||| | ||||||||||  |||||||| ||||||| |||||||||| |||| |||||||||| ||||||||||| |||||| ||||||||||||    
T  18835 ggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgt 18934  T
Q  611 tgcatttttcgtcctaccccca 632  Q
    |||||||||| |||||||||||    
T  18935 tgcatttttcatcctaccccca 18956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 515 - 631
Target Start/End: Complemental strand, 28784 - 28668
Alignment:
Q  515 taattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgca 614  Q
    |||||| | |||||||| ||||||||||| ||||| | |||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  615 tttttcgtcctaccccc 631  Q
     |||||||||| |||||    
T  28684 gttttcgtccttccccc 28668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 507 - 623
Target Start/End: Original strand, 563 - 679
Alignment:
Q  507 ttttggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcattt 606  Q
    |||| ||||||||| | ||||| |||||||||||||| ||||||| |||| || || |||| ||||||||||||||||||| ||||||||| ||||||||    
T  563 tttttgcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcattt 662  T
Q  607 ttgttgcatttttcgtc 623  Q
    |||||| ||||||||||    
T  663 ttgttgtatttttcgtc 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 514 - 631
Target Start/End: Complemental strand, 62000 - 61883
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | ||||| |||||||||||||||||||||| |||| ||||||| || |||||||| |||||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  614 atttttcgtcctaccccc 631  Q
    ||||||||||||||||||    
T  61900 atttttcgtcctaccccc 61883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 585
Target Start/End: Original strand, 61028 - 61102
Alignment:
Q  511 ggcttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaa 585  Q
    ||||||| || | ||||| |||||||||||||| ||||||| |||| || ||||||| |||||||| ||||||||    
T  61028 ggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 514 - 614
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  514 ttaattatatttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 613  Q
    ||||||| | |||||||| || |||||||||||||| | |||||||||||| || |||||||||| | |||||||||||||||| |||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  614 a 614  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 524 - 632
Target Start/End: Original strand, 462 - 570
Alignment:
Q  524 ttttggtcctcgtgttttggtctactcatgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 623  Q
    |||||||| ||||||||||| ||||||| |||| ||||| ||   |||||||||| |||| ||  ||||||||| |||||||||||||||||||||||||    
T  462 ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtc 561  T
Q  624 ctaccccca 632  Q
    |||| ||||    
T  562 ctacaccca 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 631
Target Start/End: Complemental strand, 7784 - 7713
Alignment:
Q  560 gtcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccc 631  Q
    ||||| || ||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccc 7713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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