View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4561-Insertion-5 (Length: 506)

Name: NF4561-Insertion-5
Description: NF4561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4561-Insertion-5
NF4561-Insertion-5
[»] chr1 (33 HSPs)
chr1 (243-506)||(45682755-45683018)
chr1 (6-206)||(45682517-45682717)
chr1 (29-103)||(29570682-29570756)
chr1 (134-183)||(45286250-45286299)
chr1 (144-179)||(17191220-17191255)
chr1 (134-179)||(5586734-5586779)
chr1 (134-179)||(9877650-9877695)
chr1 (134-183)||(32694555-32694604)
chr1 (134-179)||(40770387-40770432)
chr1 (134-179)||(40934665-40934710)
chr1 (134-179)||(49021689-49021734)
chr1 (134-179)||(49021913-49021958)
chr1 (159-194)||(4151461-4151496)
chr1 (134-201)||(5618318-5618385)
chr1 (144-179)||(6488893-6488928)
chr1 (144-183)||(50312024-50312063)
chr1 (134-179)||(731046-731091)
chr1 (134-179)||(4695183-4695228)
chr1 (134-179)||(5618093-5618138)
chr1 (146-183)||(8828839-8828876)
chr1 (134-179)||(8853342-8853387)
chr1 (134-179)||(10296614-10296659)
chr1 (134-179)||(12649944-12649989)
chr1 (134-179)||(17504290-17504335)
chr1 (134-179)||(28554212-28554257)
chr1 (37-98)||(30027071-30027132)
chr1 (134-179)||(31289276-31289321)
chr1 (134-179)||(34480206-34480251)
chr1 (134-183)||(40770158-40770207)
chr1 (18-75)||(51536578-51536635)
chr1 (134-178)||(12650169-12650213)
chr1 (135-179)||(26095510-26095554)
chr1 (121-193)||(37332254-37332326)
[»] chr2 (25 HSPs)
chr2 (29-98)||(474707-474776)
chr2 (29-103)||(9253207-9253281)
chr2 (134-179)||(1479050-1479095)
chr2 (134-179)||(10714255-10714300)
chr2 (134-183)||(28788885-28788934)
chr2 (134-179)||(30488102-30488147)
chr2 (134-182)||(11122663-11122711)
chr2 (88-132)||(29154142-29154186)
chr2 (144-179)||(31557005-31557040)
chr2 (150-185)||(41537496-41537531)
chr2 (31-81)||(24192062-24192112)
chr2 (134-179)||(341334-341379)
chr2 (134-179)||(1650525-1650570)
chr2 (150-179)||(10192106-10192135)
chr2 (134-179)||(15461502-15461547)
chr2 (33-94)||(22399105-22399166)
chr2 (134-179)||(23926413-23926458)
chr2 (134-179)||(23926638-23926683)
chr2 (134-179)||(26499658-26499703)
chr2 (29-74)||(27312572-27312617)
chr2 (134-179)||(28789114-28789159)
chr2 (134-179)||(30488327-30488372)
chr2 (134-179)||(35412124-35412169)
chr2 (134-179)||(42950756-42950801)
chr2 (136-176)||(21251807-21251847)
[»] chr5 (26 HSPs)
chr5 (31-104)||(12875811-12875884)
chr5 (135-194)||(7370996-7371055)
chr5 (134-179)||(1099139-1099184)
chr5 (134-179)||(16737050-16737095)
chr5 (134-183)||(31485975-31486024)
chr5 (134-202)||(19130869-19130937)
chr5 (134-178)||(33429556-33429600)
chr5 (144-179)||(3168337-3168372)
chr5 (144-179)||(7601850-7601885)
chr5 (144-183)||(7610519-7610558)
chr5 (134-180)||(3974234-3974280)
chr5 (144-182)||(17760018-17760056)
chr5 (144-178)||(30129498-30129532)
chr5 (134-179)||(1643561-1643606)
chr5 (134-179)||(7601615-7601660)
chr5 (134-179)||(14871756-14871801)
chr5 (134-179)||(16736823-16736868)
chr5 (134-179)||(19131117-19131162)
chr5 (134-179)||(33381451-33381496)
chr5 (134-179)||(33381675-33381720)
chr5 (134-179)||(33429780-33429825)
chr5 (134-179)||(39589637-39589682)
chr5 (154-190)||(2876405-2876441)
chr5 (146-194)||(27337842-27337890)
chr5 (134-178)||(32772014-32772058)
chr5 (134-178)||(42611028-42611072)
[»] chr7 (37 HSPs)
chr7 (30-98)||(41317042-41317110)
chr7 (134-183)||(41749827-41749876)
chr7 (134-183)||(2699864-2699913)
chr7 (134-183)||(7149538-7149587)
chr7 (125-194)||(7282224-7282293)
chr7 (134-179)||(11338139-11338184)
chr7 (134-183)||(21733315-21733364)
chr7 (146-179)||(31115859-31115892)
chr7 (134-179)||(43575084-43575129)
chr7 (134-179)||(45055344-45055389)
chr7 (134-179)||(45867692-45867737)
chr7 (134-179)||(47221729-47221774)
chr7 (134-202)||(38494913-38494981)
chr7 (144-179)||(8522569-8522604)
chr7 (12-75)||(44533669-44533732)
chr7 (134-179)||(7149313-7149358)
chr7 (134-179)||(8805766-8805811)
chr7 (134-179)||(8805991-8806036)
chr7 (134-179)||(8949314-8949359)
chr7 (134-179)||(12423867-12423912)
chr7 (134-179)||(21733090-21733135)
chr7 (134-179)||(24331401-24331446)
chr7 (134-179)||(34287764-34287809)
chr7 (134-179)||(38495161-38495206)
chr7 (31-104)||(41054738-41054811)
chr7 (134-179)||(41922304-41922349)
chr7 (134-179)||(42391318-42391363)
chr7 (134-179)||(43575297-43575342)
chr7 (134-179)||(44458031-44458076)
chr7 (134-179)||(45055569-45055614)
chr7 (134-179)||(45062309-45062354)
chr7 (134-179)||(47221942-47221987)
chr7 (134-178)||(11337915-11337959)
chr7 (134-178)||(28588340-28588384)
chr7 (134-182)||(34287535-34287583)
chr7 (134-178)||(45062085-45062129)
chr7 (134-178)||(46426684-46426728)
[»] scaffold0024 (1 HSPs)
scaffold0024 (30-103)||(88532-88605)
[»] chr6 (24 HSPs)
chr6 (37-98)||(1368266-1368327)
chr6 (134-179)||(13853164-13853209)
chr6 (29-103)||(1375861-1375935)
chr6 (29-103)||(1383609-1383683)
chr6 (134-179)||(8129780-8129825)
chr6 (134-183)||(12240728-12240777)
chr6 (134-179)||(21926086-21926131)
chr6 (150-183)||(25121544-25121577)
chr6 (135-183)||(20028021-20028069)
chr6 (144-183)||(24335551-24335590)
chr6 (134-179)||(684975-685020)
chr6 (134-183)||(685200-685249)
chr6 (134-179)||(2316736-2316781)
chr6 (134-179)||(2882905-2882950)
chr6 (150-183)||(3011930-3011963)
chr6 (134-183)||(3105622-3105671)
chr6 (134-179)||(9899217-9899262)
chr6 (134-179)||(9899442-9899487)
chr6 (134-183)||(11361807-11361856)
chr6 (134-179)||(11362027-11362072)
chr6 (134-179)||(22568785-22568830)
chr6 (134-182)||(9220350-9220398)
chr6 (134-178)||(21926311-21926355)
chr6 (134-178)||(24325015-24325059)
[»] chr4 (26 HSPs)
chr4 (134-179)||(16530340-16530385)
chr4 (134-179)||(10993647-10993692)
chr4 (134-179)||(32922089-32922134)
chr4 (134-179)||(46648091-46648136)
chr4 (29-94)||(53145896-53145961)
chr4 (30-74)||(8358546-8358590)
chr4 (134-178)||(39791940-39791984)
chr4 (134-185)||(17040157-17040208)
chr4 (24-75)||(31310739-31310790)
chr4 (144-179)||(39792176-39792211)
chr4 (144-183)||(45655711-45655750)
chr4 (134-179)||(9902675-9902720)
chr4 (134-179)||(9902903-9902948)
chr4 (86-131)||(17040098-17040143)
chr4 (134-179)||(20984161-20984206)
chr4 (36-97)||(24559534-24559595)
chr4 (134-179)||(32922314-32922359)
chr4 (134-179)||(35131043-35131088)
chr4 (30-103)||(41905972-41906045)
chr4 (134-183)||(41935511-41935560)
chr4 (134-179)||(44551162-44551207)
chr4 (134-179)||(52537901-52537946)
chr4 (134-179)||(52538126-52538171)
chr4 (134-179)||(52654179-52654224)
chr4 (134-178)||(26843046-26843090)
chr4 (144-176)||(49498696-49498728)
[»] chr3 (28 HSPs)
chr3 (134-194)||(25061308-25061368)
chr3 (144-194)||(25061535-25061585)
chr3 (29-103)||(29560432-29560506)
chr3 (134-179)||(11221239-11221284)
chr3 (134-179)||(31574500-31574545)
chr3 (134-194)||(32809161-32809221)
chr3 (144-179)||(21017182-21017217)
chr3 (144-178)||(2397809-2397843)
chr3 (133-179)||(35220591-35220637)
chr3 (144-178)||(36546125-36546159)
chr3 (144-178)||(36562155-36562189)
chr3 (134-179)||(6954244-6954289)
chr3 (134-175)||(13997164-13997205)
chr3 (134-179)||(14463370-14463415)
chr3 (134-179)||(18169001-18169046)
chr3 (134-179)||(20209172-20209217)
chr3 (134-179)||(29434323-29434368)
chr3 (134-179)||(35415489-35415534)
chr3 (144-181)||(39778300-39778337)
chr3 (134-179)||(44664643-44664688)
chr3 (134-179)||(44920145-44920190)
chr3 (134-179)||(45171600-45171645)
chr3 (134-179)||(46292604-46292649)
chr3 (134-179)||(50710725-50710770)
chr3 (134-179)||(50711242-50711287)
chr3 (134-178)||(2773392-2773436)
chr3 (22-74)||(29019281-29019333)
chr3 (134-178)||(29434548-29434592)
[»] chr8 (23 HSPs)
chr8 (29-92)||(41139688-41139751)
chr8 (145-183)||(33278953-33278991)
chr8 (134-179)||(17494970-17495015)
chr8 (134-179)||(26938208-26938253)
chr8 (134-179)||(30253648-30253693)
chr8 (134-194)||(148300-148360)
chr8 (134-194)||(42685035-42685095)
chr8 (31-98)||(1802685-1802752)
chr8 (134-179)||(8156955-8157000)
chr8 (134-179)||(18805768-18805813)
chr8 (134-179)||(27713011-27713056)
chr8 (134-179)||(28828238-28828283)
chr8 (134-179)||(29596424-29596469)
chr8 (134-179)||(33279185-33279230)
chr8 (134-179)||(34632472-34632517)
chr8 (134-179)||(36556782-36556827)
chr8 (134-183)||(40277240-40277289)
chr8 (134-179)||(41617287-41617332)
chr8 (135-179)||(21660748-21660792)
chr8 (134-178)||(24419465-24419509)
chr8 (134-178)||(26187375-26187419)
chr8 (134-178)||(34198858-34198902)
chr8 (134-178)||(36556558-36556602)
[»] scaffold0592 (1 HSPs)
scaffold0592 (134-183)||(8635-8684)


Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-144; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 243 - 506
Target Start/End: Original strand, 45682755 - 45683018
Alignment:
Q  243 gtaggggtaggggtgcgtaaaagggtaacttggtcttgtaataatcccatcatgaatgaatctggggaagggttgcacccattatggatctatgttaggt 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682755 gtaggggtaggggtgcgtaaaagggtaacttggtcttgtaataatcccatcatgaatgaatctggggaagggttgcacccattatggatctatgttaggt 45682854  T
Q  343 ttcctttacatctagaaaaagctaattccactactcaaacctttagatgaattaaatttgacttaagtttgaactcccagtattttgtatattttatata 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682855 ttcctttacatctagaaaaagctaattccactactcaaacctttagatgaattaaatttgacttaagtttgaactcccagtattttgtatattttatata 45682954  T
Q  443 atatatcgtaataagttaaaccgaggaatctgttccttttggatgaactgagaagcaattgtag 506  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45682955 atatatcgtaataagttaaaccaaggaatctgttccttttggatgaactgagaagcaattgtag 45683018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 206
Target Start/End: Original strand, 45682517 - 45682717
Alignment:
Q  6 catttggtcctattgatccgttggcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttgaag 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||     
T  45682517 catttggtcctattgatccgttggcatatgaattttcaagctttaaatataagattcatatgcaaacatggatgaaagaccatagatttgaagcttgaaa 45682616  T
Q  106 ttccatatgcacatggaccaaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcctctg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45682617 ttccatatgcacatggaccaaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaatgttgcctctg 45682716  T
Q  206 c 206  Q
    |    
T  45682717 c 45682717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 29570756 - 29570682
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    ||||||| |||||||||||| ||||  |||||||||||| |||||| | | ||||||||||||||||||| ||||    
T  29570756 gcatatgtattttcaagcttcaaatcaaagattcatatgcaaacataggtgaaagaccatagatttgaagattga 29570682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 45286299 - 45286250
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  45286299 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaagagac 45286250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 17191255 - 17191220
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||||||||||||||||||||||||||    
T  17191255 ataaatgaccaaattgttacctgaaattaagttaag 17191220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 5586734 - 5586779
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  5586734 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 5586779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 9877650 - 9877695
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  9877650 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 9877695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 32694555 - 32694604
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  32694555 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 32694604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 40770387 - 40770432
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  40770387 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 40770432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 40934665 - 40934710
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  40934665 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 40934710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 49021734 - 49021689
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  49021734 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 49021689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 49021913 - 49021958
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  49021913 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 49021958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 4151461 - 4151496
Alignment:
Q  159 gttacctgaaattaagttaagagaccacaagagtaa 194  Q
    |||||||||||||| |||||||||||||||||||||    
T  4151461 gttacctgaaattatgttaagagaccacaagagtaa 4151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 5618318 - 5618385
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcc 201  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||| ||| | ||| ||||| |||||    
T  5618318 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaactttgcc 5618385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 6488928 - 6488893
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6488928 ataaatgaccaaactgttacctgaaattaagttaag 6488893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 50312063 - 50312024
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  50312063 ataaatgaccaaactgttacctgaaattaaattaagagac 50312024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 731046 - 731091
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||||    
T  731046 tgaaaaaatgataaaggactaaattattacctgaaattaagttaag 731091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 4695183 - 4695228
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  4695183 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 4695228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 5618138 - 5618093
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  5618138 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 5618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 8828839 - 8828876
Alignment:
Q  146 aaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  8828839 aaatgactaaactgttacctgaaattaagttaagagac 8828876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 8853342 - 8853387
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8853342 tgaaaaaaaaataaaggaccaaactgttacctgaaattaagttaag 8853387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 10296659 - 10296614
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  10296659 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 10296614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12649989 - 12649944
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  12649989 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 12649944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 17504290 - 17504335
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  17504290 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 17504335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 28554257 - 28554212
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  28554257 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 28554212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 30027071 - 30027132
Alignment:
Q  37 attttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaag 98  Q
    |||||||||||| |||| ||| ||||||||| |||||||| | ||  |||||||||||||||    
T  30027071 attttcaagcttcaaatctaaaattcatatgcaaacatggctgaagaaccatagatttgaag 30027132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 31289321 - 31289276
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  31289321 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 31289276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 34480251 - 34480206
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  34480251 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 34480206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 40770207 - 40770158
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| |||| || ||||||||||||||||||||||||||    
T  40770207 tgaaaaaaagataaaagacccaactgttacctgaaattaagttaagagac 40770158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 51536635 - 51536578
Alignment:
Q  18 ttgatccgttggcatatgaattttcaagctttaaatataagattcatatgaaaacatg 75  Q
    ||||||| || ||||||||||||| || | |||||| ||| |||||||||||||||||    
T  51536635 ttgatccttttgcatatgaattttgaaacattaaatctaaaattcatatgaaaacatg 51536578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 12650169 - 12650213
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  12650169 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 12650213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 26095554 - 26095510
Alignment:
Q  135 gaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||    
T  26095554 gaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 26095510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 37332254 - 37332326
Alignment:
Q  121 gaccaaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagta 193  Q
    |||||||| ||||||| ||||  ||||| ||| |||||||||||| |||||| |||||| | ||||| |||||    
T  37332254 gaccaaaatgacgtgacaaaaagataaaagactaaattgttacctaaaattaggttaaggggccacaggagta 37332326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 5e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 474776 - 474707
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaag 98  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||| | || ||||||||||||||||    
T  474776 gcatatgaattttcaagcttcaaatttaagattcatatgcaaacatgggtgaaggaccatagatttgaag 474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 9253207 - 9253281
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    |||||||||||||||||| | |||| ||||||| |||| ||||||| ||| |||||||||| |||||||| ||||    
T  9253207 gcatatgaattttcaagcatcaaatctaagatttatatcaaaacatagatgaaagaccatatatttgaagattga 9253281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 1479095 - 1479050
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||    
T  1479095 tgaaaaaaagataaatgaccaaattattacctgaaattaagttaag 1479050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 10714255 - 10714300
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  10714255 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 10714300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 28788934 - 28788885
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  28788934 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 28788885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 30488147 - 30488102
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||    
T  30488147 tgaaaaaaagataaatgatcaaattgttacctgaaattaagttaag 30488102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 11122711 - 11122663
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagaga 182  Q
    |||||||  |||||| ||||||| |||||||||||||||||||||||||    
T  11122711 tgaaaaatatataaaggaccaaactgttacctgaaattaagttaagaga 11122663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 29154186 - 29154142
Alignment:
Q  88 tagatttgaagcttgaagttccatatgcacatggaccaaaaggac 132  Q
    |||||||||||||||||| |||||||| | |||||||||||||||    
T  29154186 tagatttgaagcttgaagatccatatgaaaatggaccaaaaggac 29154142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 31557005 - 31557040
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31557005 ataaatgaccaaactgttacctgaaattaagttaag 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 41537531 - 41537496
Alignment:
Q  150 gaccaaattgttacctgaaattaagttaagagacca 185  Q
    |||||||||||||||||||||||||||||| |||||    
T  41537531 gaccaaattgttacctgaaattaagttaagggacca 41537496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 24192062 - 24192112
Alignment:
Q  31 atatgaattttcaagctttaaatataagattcatatgaaaacatggataaa 81  Q
    ||||||||||| ||| || |||||||| |||||||||||||||| ||||||    
T  24192062 atatgaatttttaagtttcaaatataatattcatatgaaaacatagataaa 24192112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 341379 - 341334
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  341379 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 341334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 1650570 - 1650525
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  1650570 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 1650525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 10192135 - 10192106
Alignment:
Q  150 gaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  10192135 gaccaaattgttacctgaaattaagttaag 10192106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 15461502 - 15461547
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||||||    
T  15461502 tgaaaaaaagataaatgactaaactgttacctgaaattaagttaag 15461547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 22399105 - 22399166
Alignment:
Q  33 atgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagattt 94  Q
    |||||||||||||||| |||| ||||||||| ||| |||||| | | |||||||||| ||||    
T  22399105 atgaattttcaagcttcaaatctaagattcaaatgtaaacataggtgaaagaccataaattt 22399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 23926458 - 23926413
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||||||    
T  23926458 tgaaaaaaagataaatgacgaaactgttacctgaaattaagttaag 23926413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 23926638 - 23926683
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| || |||||||||||||||||||||||||||    
T  23926638 tgaaaaaaagataaaagatcaaattgttacctgaaattaagttaag 23926683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 26499658 - 26499703
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  26499658 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 26499703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 27312617 - 27312572
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacat 74  Q
    |||||| ||||||||  ||| |||||||||||||||||||||||||    
T  27312617 gcatataaattttcatacttcaaatataagattcatatgaaaacat 27312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 28789114 - 28789159
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  28789114 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 28789159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 30488327 - 30488372
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  30488327 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 30488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35412124 - 35412169
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  35412124 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 35412169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 42950756 - 42950801
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| |||||||||||||||| |||||    
T  42950756 tgaaaaaaagataaatgaccaaactgttacctgaaattaaattaag 42950801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 21251847 - 21251807
Alignment:
Q  136 aaaaaattataaatgaccaaattgttacctgaaattaagtt 176  Q
    |||||| |||||||||| ||| |||||||||||||||||||    
T  21251847 aaaaaaatataaatgacgaaagtgttacctgaaattaagtt 21251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 12875884 - 12875811
Alignment:
Q  31 atatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttgaa 104  Q
    ||||| ||||||||||||||||| ||| |||| |||| |||||| ||||||| ||||||||||||||| |||||    
T  12875884 atatggattttcaagctttaaatctaatattcttatgcaaacatagataaaaaaccatagatttgaagattgaa 12875811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 7371055 - 7370996
Alignment:
Q  135 gaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||| ||||||| ||||||    
T  7371055 gaaaaaaagataaatgactaaattgttacctaaaattaagttaagggaccacaggagtaa 7370996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 1099139 - 1099184
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  1099139 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 1099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 16737050 - 16737095
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||    
T  16737050 tgaaaaaaagataaatgaccaaattattacctgaaattaagttaag 16737095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 31486024 - 31485975
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  31486024 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 31485975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 19130937 - 19130869
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcct 202  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||| ||| | ||| ||||| ||||||    
T  19130937 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaactttgcct 19130869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 33429600 - 33429556
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||    
T  33429600 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaa 33429556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 3168337 - 3168372
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    |||||| |||||||||||||||||||||||||||||    
T  3168337 ataaataaccaaattgttacctgaaattaagttaag 3168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 7601850 - 7601885
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7601850 ataaatgaccaaactgttacctgaaattaagttaag 7601885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 7610519 - 7610558
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  7610519 ataaaggaccaaactgttacctgaaattaagttaagagac 7610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 3974280 - 3974234
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaaga 180  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||||    
T  3974280 tgaaaaaaagataaaggaccaaattgttatctgaaattaagttaaga 3974234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 17760018 - 17760056
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagaga 182  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  17760018 ataaataaccaaattgttacctaaaattaagttaagaga 17760056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 30129532 - 30129498
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||| |||||||||||||||||||||||||||||    
T  30129532 ataaaagaccaaattgttacctgaaattaagttaa 30129498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 1643606 - 1643561
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  1643606 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 1643561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 7601660 - 7601615
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  7601660 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 7601615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 14871801 - 14871756
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  14871801 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 14871756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 16736868 - 16736823
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  16736868 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 16736823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 19131117 - 19131162
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  19131117 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 19131162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 33381496 - 33381451
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33381496 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 33381451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 33381675 - 33381720
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33381675 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 33429780 - 33429825
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33429780 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33429825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 39589682 - 39589637
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  39589682 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 39589637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 2876405 - 2876441
Alignment:
Q  154 aaattgttacctgaaattaagttaagagaccacaaga 190  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  2876405 aaattgttatctgaaattaagttaagaaaccacaaga 2876441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 27337890 - 27337842
Alignment:
Q  146 aaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||| ||||    
T  27337890 aaatgactaaattgttatttgaaattaagttaagagactacaagtgtaa 27337842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 32772058 - 32772014
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  32772058 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 32772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 42611028 - 42611072
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  42611028 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 42611072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 41317110 - 41317042
Alignment:
Q  30 catatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaag 98  Q
    |||||| ||||||||||||||||| ||| ||||||| | ||||||| || |||||||||||||||||||    
T  41317110 catatgtattttcaagctttaaatctaaaattcataggcaaacatgaatgaaagaccatagatttgaag 41317042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 41749827 - 41749876
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  41749827 tgaaaaaaagataaatgaccaaattgttacctgaaattaagctaagagac 41749876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 2699864 - 2699913
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  2699864 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 2699913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 7149538 - 7149587
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||||||||||| ||||| ||||||||||||||||||||    
T  7149538 tgaaaaaaagataaatgaccaaactgttatctgaaattaagttaagagac 7149587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 7282224 - 7282293
Alignment:
Q  125 aaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    |||| ||||||||||||  |||| |||| ||||||||| | |||||||||||||||||| ||||| ||||    
T  7282224 aaaatgacgtgaaaaaaagataattgacaaaattgttatcagaaattaagttaagagacaacaagtgtaa 7282293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 11338139 - 11338184
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  11338139 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 11338184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 21733315 - 21733364
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||| ||||||||||||||||||||||||||||||    
T  21733315 tgaaaaaaagataaaggacgaaattgttacctgaaattaagttaagagac 21733364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 31115892 - 31115859
Alignment:
Q  146 aaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||||||||||||||||||||||||    
T  31115892 aaatgaccaaattgttacctgaaattaagttaag 31115859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 43575129 - 43575084
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  43575129 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 43575084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 45055389 - 45055344
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  45055389 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 45055344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 45867692 - 45867737
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  45867692 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 45867737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 47221774 - 47221729
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  47221774 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 47221729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 38494981 - 38494913
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcct 202  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||| ||| | ||| ||||| ||||||    
T  38494981 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaactttgcct 38494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 8522569 - 8522604
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8522569 ataaaggaccaaattgttacctgaaattaagttaag 8522604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 44533732 - 44533669
Alignment:
Q  12 gtcctattgatccgttggcatatgaattttcaagctttaaatataagattcatatgaaaacatg 75  Q
    ||||| ||| |||||| ||||||| |||||||||| | |||| ||| |||||||||||||||||    
T  44533732 gtccttttggtccgtttgcatatggattttcaagcatcaaatttaaaattcatatgaaaacatg 44533669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 7149358 - 7149313
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  7149358 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 7149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 8805811 - 8805766
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8805811 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 8805991 - 8806036
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8805991 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8806036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 8949359 - 8949314
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8949359 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8949314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12423912 - 12423867
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  12423912 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 12423867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 21733135 - 21733090
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  21733135 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 21733090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 24331446 - 24331401
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  24331446 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 24331401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 34287764 - 34287809
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  34287764 tgaaaaaaagataaaggaccaaagtgttacctgaaattaagttaag 34287809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 38495161 - 38495206
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  38495161 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 38495206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 41054811 - 41054738
Alignment:
Q  31 atatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttgaa 104  Q
    |||||||||||| |||||||||| ||| |||| |||| |||||| ||||||| |||| | |||| ||| |||||    
T  41054811 atatgaattttcgagctttaaatctaatattcttatgcaaacattgataaaaaaccacaaatttaaagattgaa 41054738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 41922349 - 41922304
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  41922349 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 41922304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 42391363 - 42391318
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  42391363 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 42391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 43575297 - 43575342
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  43575297 tgaaaaaaagataaaggaccaaaatgttacctgaaattaagttaag 43575342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 44458031 - 44458076
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  44458031 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 44458076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 45055569 - 45055614
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  45055569 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 45055614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 45062309 - 45062354
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  45062309 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 45062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 47221942 - 47221987
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  47221942 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 47221987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 11337959 - 11337915
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||    
T  11337959 tgaaaaaaagataaaggaccaaattgttacatgaaattaagttaa 11337915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 28588384 - 28588340
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  28588384 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaa 28588340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 34287583 - 34287535
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagaga 182  Q
    ||||||||  ||||| ||||||| |||||||| ||||||||||||||||    
T  34287583 tgaaaaaaagataaaggaccaaactgttacctaaaattaagttaagaga 34287535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 45062129 - 45062085
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  45062129 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 45062085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 46426728 - 46426684
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| |||||||||||||||| ||||||||||||    
T  46426728 tgaaaaaaagataaaggaccaaattgttacctaaaattaagttaa 46426684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 88532 - 88605
Alignment:
Q  30 catatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||| ||| |||| | ||| |||||||| ||||    
T  88532 catatgaattttcaagcatcaaatatatgattcatatgaaaacatagatgaaagcctatatatttgaagattga 88605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 1368266 - 1368327
Alignment:
Q  37 attttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaag 98  Q
    ||||||||||||||||| |||||||||| | |||||||| || ||||| |||||||||||||    
T  1368266 attttcaagctttaaatctaagattcatgtcaaaacatgaatgaaagaacatagatttgaag 1368327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 13853209 - 13853164
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  13853209 tgaaaaaaagataaatgaccaaattgttacctgaaattaagttaag 13853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 1375861 - 1375935
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    ||||||| ||||||||| ||||||| |||| |||||| | ||||||| || ||||| ||||||||||||| ||||    
T  1375861 gcatatgtattttcaagttttaaatctaaggttcataggcaaacatgaatgaaagaacatagatttgaagattga 1375935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 1383609 - 1383683
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    ||||||| ||||||||| ||||||| |||| |||||| | ||||||| || ||||| ||||||||||||| ||||    
T  1383609 gcatatgtattttcaagttttaaatctaaggttcataggcaaacatgaatgaaagaacatagatttgaagattga 1383683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 8129780 - 8129825
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  8129780 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 8129825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 12240728 - 12240777
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  12240728 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 12240777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 21926131 - 21926086
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||    
T  21926131 tgaaaaaaatataaaggaccaaactgttacctgaaattaagttaag 21926086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 25121577 - 25121544
Alignment:
Q  150 gaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||||||||||||||||||||||||||||    
T  25121577 gaccaaattgttacctgaaattaagttaagagac 25121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 20028021 - 20028069
Alignment:
Q  135 gaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  20028021 gaaaaaaagataaaagaccaaactgttacctgaaattaagttaagagac 20028069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 24335590 - 24335551
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  24335590 ataaaggaccaaattgttacctgaaattaaattaagagac 24335551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 685020 - 684975
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  685020 tgaaaaaaagataaaggaccaaattgttatctgaaattaagttaag 684975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 685200 - 685249
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||| ||| ||||||||||||||||||||||||||    
T  685200 tgaaaaaaagataaaggactaaactgttacctgaaattaagttaagagac 685249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 2316736 - 2316781
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  2316736 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 2316781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 2882950 - 2882905
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  2882950 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 2882905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 3011963 - 3011930
Alignment:
Q  150 gaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||| ||||||||||||||||||||||||||    
T  3011963 gaccaaactgttacctgaaattaagttaagagac 3011930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 3105671 - 3105622
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| |||||||  |||||||||||||||||||||||||    
T  3105671 tgaaaaaaagataaaggaccaaacagttacctgaaattaagttaagagac 3105622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 9899262 - 9899217
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9899262 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9899217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 9899442 - 9899487
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9899442 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 11361856 - 11361807
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||||||| ||| |||||||||||||||| |||||||||    
T  11361856 tgaaaaaaagataaatgactaaactgttacctgaaattaaattaagagac 11361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 11362027 - 11362072
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  11362027 tgaaaaaaagataaaggaccaaattgttatctgaaattaagttaag 11362072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 22568830 - 22568785
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  22568830 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 22568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 9220350 - 9220398
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagaga 182  Q
    ||||||||  ||||| ||||||| | |||||||||||||||||||||||    
T  9220350 tgaaaaaaagataaaagaccaaactcttacctgaaattaagttaagaga 9220398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 21926311 - 21926355
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  21926311 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 21926355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 24325059 - 24325015
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| | |||||||||||||||||||||||||||    
T  24325059 tgaaaaaaagataaagggccaaattgttacctgaaattaagttaa 24325015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 16530385 - 16530340
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  16530385 tgaaaaaaagataaatgaccaaattgttacctgaaattaagttaag 16530340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 10993692 - 10993647
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  10993692 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 10993647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 32922134 - 32922089
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  32922134 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 32922089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 46648136 - 46648091
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  46648136 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 46648091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 53145896 - 53145961
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagattt 94  Q
    ||||||||||||||||  |||||||||||||||| ||||||| ||| ||  |||||||||| ||||    
T  53145896 gcatatgaattttcaaaatttaaatataagattcgtatgaaagcatagaggaaagaccatatattt 53145961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 8358590 - 8358546
Alignment:
Q  30 catatgaattttcaagctttaaatataagattcatatgaaaacat 74  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||    
T  8358590 catatgaattttcaagcttcaaatctaagattcatatgcaaacat 8358546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 39791984 - 39791940
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||    
T  39791984 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaa 39791940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 17040157 - 17040208
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagacca 185  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||| |||||    
T  17040157 tgaaaaaaagataaaggaccaaattgttaactgaaattaagttaagggacca 17040208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 31310790 - 31310739
Alignment:
Q  24 cgttggcatatgaattttcaagctttaaatataagattcatatgaaaacatg 75  Q
    |||| |||||||||||||||||  |||||| ||| |||||||||||||||||    
T  31310790 cgttagcatatgaattttcaagtattaaatctaaaattcatatgaaaacatg 31310739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 39792176 - 39792211
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39792176 ataaaggaccaaattgttacctgaaattaagttaag 39792211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 45655750 - 45655711
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  45655750 ataaaagacaaaattgttacctgaaattaagttaagagac 45655711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 9902720 - 9902675
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9902720 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9902675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 9902903 - 9902948
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9902903 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9902948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 17040098 - 17040143
Alignment:
Q  86 catagatttgaagcttgaagttccatatgcacatggaccaaaagga 131  Q
    |||||||||||||||||||  |||||||||| ||| ||||||||||    
T  17040098 catagatttgaagcttgaaaatccatatgcaaatgaaccaaaagga 17040143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 20984161 - 20984206
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  20984161 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 20984206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 24559595 - 24559534
Alignment:
Q  36 aattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaa 97  Q
    ||||||||| | | |||| ||| ||||||||||||||||| || || |||||||||||||||    
T  24559595 aattttcaaacataaaatctaaaattcatatgaaaacatgaatgaatgaccatagatttgaa 24559534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 32922314 - 32922359
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  32922314 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 32922359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35131043 - 35131088
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  35131043 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 35131088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 41905972 - 41906045
Alignment:
Q  30 catatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    |||||| ||||||||| || |||| ||| || |||||| ||| |||| |||||||| |||||||||||| ||||    
T  41905972 catatggattttcaagtttaaaatctaatatgcatatgcaaatatgggtaaaagactatagatttgaagattga 41906045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 41935560 - 41935511
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| |||| || ||||||||||||||||||||||||||    
T  41935560 tgaaaaaaagataaaggaccgaactgttacctgaaattaagttaagagac 41935511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 44551162 - 44551207
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  44551162 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 44551207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 52537946 - 52537901
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  52537946 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 52537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 52538126 - 52538171
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  52538126 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 52538171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 52654179 - 52654224
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  52654179 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 52654224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 26843046 - 26843090
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  26843046 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 26843090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 49498696 - 49498728
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagtt 176  Q
    ||||| |||||||||||||||||||||||||||    
T  49498696 ataaaggaccaaattgttacctgaaattaagtt 49498728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 25061368 - 25061308
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||| ||||| ||| ||||    
T  25061368 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaagggaccaaaagtgtaa 25061308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 25061535 - 25061585
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  25061535 ataaaggaccaaactgttacctgaaattaagttaagagaccaaaagtgtaa 25061585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 29560432 - 29560506
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaagcttga 103  Q
    |||||| ||||||||| ||| |||  ||||||||||||| |||||| ||| |||||||||| |||||||| ||||    
T  29560432 gcatataaattttcaatcttcaaagttaagattcatatgcaaacatagatgaaagaccatatatttgaagattga 29560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 11221239 - 11221284
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  11221239 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 11221284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 31574500 - 31574545
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  31574500 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 31574545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 32809221 - 32809161
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    ||||||||  ||||| |||||||||||||||||||||||| ||||| ||||| ||| ||||    
T  32809221 tgaaaaaaagataaaggaccaaattgttacctgaaattaaattaagggaccaaaagtgtaa 32809161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 21017182 - 21017217
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||||||| ||||||||||||||||||||||    
T  21017182 ataaatgaccaaactgttacctgaaattaagttaag 21017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 2397843 - 2397809
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  2397843 ataaatgacaaaattgttacctgaaattaagttaa 2397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 35220637 - 35220591
Alignment:
Q  133 gtgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    |||||||||  ||||||||| ||||||||| ||||||||||||||||    
T  35220637 gtgaaaaaaagataaatgacgaaattgttatctgaaattaagttaag 35220591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 36546159 - 36546125
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||| |||||||||||||||||||||||||||||    
T  36546159 ataaaggaccaaattgttacctgaaattaagttaa 36546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 36562155 - 36562189
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||| |||||||||||||||||||||||||||||    
T  36562155 ataaaggaccaaattgttacctgaaattaagttaa 36562189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 6954244 - 6954289
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||||||||| || |||||||||||||    
T  6954244 tgaaaaaaagataaatgaccaaattgttatctaaaattaagttaag 6954289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 13997164 - 13997205
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagt 175  Q
    ||||||||  ||||| ||||||||||||||||||||||||||    
T  13997164 tgaaaaaaagataaaggaccaaattgttacctgaaattaagt 13997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 14463370 - 14463415
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  14463370 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 14463415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 18169001 - 18169046
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  18169001 tgaaaaaaagataaatgaccaaactgttatctgaaattaagttaag 18169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 20209217 - 20209172
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  20209217 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 20209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 29434368 - 29434323
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| || |||||||||||||||||||||||||||    
T  29434368 tgaaaaaaagataaaggatcaaattgttacctgaaattaagttaag 29434323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35415489 - 35415534
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  35415489 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 35415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 39778337 - 39778300
Alignment:
Q  144 ataaatgaccaaattgttacctgaaattaagttaagag 181  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  39778337 ataaatgactaaactgttacctgaaattaagttaagag 39778300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 44664688 - 44664643
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||| ||||||||||||||||||||||||||    
T  44664688 tgaaaaaaagataaaggactaaattgttacctgaaattaagttaag 44664643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 44920145 - 44920190
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| |||||||||||| |||||||||||||||||    
T  44920145 tgaaaaaaagataaaggaccaaattgttgcctgaaattaagttaag 44920190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 45171645 - 45171600
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  45171645 tgaaaaaaagataaaggaccaaattgttacccgaaattaagttaag 45171600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 46292649 - 46292604
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  46292649 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 46292604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 50710770 - 50710725
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  50710770 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 50710725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 50711242 - 50711287
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  50711242 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 50711287  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 2773392 - 2773436
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| |||||| ||||||||||||||||||||||    
T  2773392 tgaaaaaaagataaaggaccaagttgttacctgaaattaagttaa 2773436  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 29019333 - 29019281
Alignment:
Q  22 tccgttggcatatgaattttcaagctttaaatataagattcatatgaaaacat 74  Q
    |||||| |||||||||||||||||| | |||| ||| ||| ||||||||||||    
T  29019333 tccgtttgcatatgaattttcaagcatcaaatttaaaattaatatgaaaacat 29019281  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 29434548 - 29434592
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  29434548 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 29434592  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 41139688 - 41139751
Alignment:
Q  29 gcatatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagat 92  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||   ||| ||||||||||    
T  41139688 gcatatgaattttcaagctttcaatataagattcatatgcaaatatgagcaaatgaccatagat 41139751  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 33278991 - 33278953
Alignment:
Q  145 taaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33278991 taaaagaccaaattgttacctgaaattaagttaagagac 33278953  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 17494970 - 17495015
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  17494970 tgaaaaaaagataaatgaccaaaatgttacctgaaattaagttaag 17495015  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 26938253 - 26938208
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  26938253 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 26938208  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 30253693 - 30253648
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  30253693 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 30253648  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 148360 - 148300
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    ||||||||  ||||| |||||||||||||||| ||||||||||||| ||||| ||| ||||    
T  148360 tgaaaaaaagataaaggaccaaattgttacctaaaattaagttaagggaccaaaagtgtaa 148300  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 42685035 - 42685095
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 194  Q
    ||||||||  ||||| |||||||||||||| | ||||||||||||||||| | ||||||||    
T  42685035 tgaaaaaaagataaaggaccaaattgttacttaaaattaagttaagagactaaaagagtaa 42685095  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 1802685 - 1802752
Alignment:
Q  31 atatgaattttcaagctttaaatataagattcatatgaaaacatggataaaagaccatagatttgaag 98  Q
    ||||||||||||||| || |||| ||||||||||||| ||||||   | ||| |||||||||||||||    
T  1802685 atatgaattttcaagtttcaaatttaagattcatatgtaaacataagtgaaaaaccatagatttgaag 1802752  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 8156955 - 8157000
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8156955 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8157000  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 18805813 - 18805768
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  18805813 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 18805768  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 27713011 - 27713056
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  27713011 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 27713056  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 28828283 - 28828238
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| |||||||||||||| |||||||||||||||    
T  28828283 tgaaaaaaagataaaggaccaaattgttacttgaaattaagttaag 28828238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 29596469 - 29596424
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  29596469 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 29596424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 33279185 - 33279230
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33279185 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33279230  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 34632472 - 34632517
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  34632472 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 34632517  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 36556782 - 36556827
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  36556782 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 36556827  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 40277289 - 40277240
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| | ||||||||||||||||||||||||    
T  40277289 tgaaaaaaagataaaggaccaaactattacctgaaattaagttaagagac 40277240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 41617287 - 41617332
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  41617287 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 41617332  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 21660792 - 21660748
Alignment:
Q  135 gaaaaaattataaatgaccaaattgttacctgaaattaagttaag 179  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||    
T  21660792 gaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 21660748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 24419509 - 24419465
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    |||||||| |||||| ||||||||| |||||| ||||||||||||    
T  24419509 tgaaaaaaatataaaggaccaaattattacctaaaattaagttaa 24419465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 26187375 - 26187419
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  26187375 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 26187419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 34198902 - 34198858
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  34198902 tgaaaaattgataaaggaccaaactgttacctgaaattaagttaa 34198858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 36556602 - 36556558
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 178  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  36556602 tgaaaaaaaaataaaggaccaaactgttacctgaaattaagttaa 36556558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 8635 - 8684
Alignment:
Q  134 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 183  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||| ||||    
T  8635 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaaagac 8684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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