View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4561-Insertion-6 (Length: 437)
Name: NF4561-Insertion-6
Description: NF4561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4561-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 8 - 437
Target Start/End: Complemental strand, 33769691 - 33769262
Alignment:
| Q |
8 |
cttacttcacatacatatcatgcatgatcagatattgcgtctaataccagtaggaaaaggaaacaaccataatagaatctatttttgtactcattactaa |
107 |
Q |
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| T |
33769691 |
cttacttcacatatatatcatgcatgatcagatattgcgtctaataccagtaggaaaaggaaacaaccataatagaatctatttttgtactccttactaa |
33769592 |
T |
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| Q |
108 |
cttatgatgtatttacttcacatatagttctggttttacaacatgattcctgatatatgtatatatgggaataatgagattcatttggttccaattctcc |
207 |
Q |
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| T |
33769591 |
cttatgatgtatttacttcacatatagttctggttttacaacatgattcctgatatatgtatatatgggaataatgagattcatttggttccaattctcc |
33769492 |
T |
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| Q |
208 |
tcttctcattcgaactatgattgtattcaaaatttcccaatcacatacaaaacaaaatcgccaggatttgcaatgacataacgctgattctgatagaaga |
307 |
Q |
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| T |
33769491 |
tcttctcattcgaactatgattgtattcaaaatttcccaatcacatacaaaacaaaatcgccaggatttgcaatgacataatgctgattctgatagaaga |
33769392 |
T |
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| Q |
308 |
atgtgttgaagccaccttaaaaccaaaaacatataattgtcagttagcaatatggtttcagtttcagaagaaaatatatatatgtatgaagttataataa |
407 |
Q |
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| T |
33769391 |
atgtgttgaagccaccttaaaaccaaaaacatataattgtcagttagcaatatagtttcagtttcagaagaaaatatatatatgtatgaagttataataa |
33769292 |
T |
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| Q |
408 |
gtagcaaagatacacaaatgtagtgttgca |
437 |
Q |
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| T |
33769291 |
gtagcaaagacacacaaatgtagtgttgca |
33769262 |
T |
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