View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4561-Insertion-9 (Length: 269)

Name: NF4561-Insertion-9
Description: NF4561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4561-Insertion-9
NF4561-Insertion-9
[»] chr2 (73 HSPs)
chr2 (8-269)||(3423656-3423915)
chr2 (8-90)||(15866733-15866815)
chr2 (6-93)||(11513822-11513906)
chr2 (9-82)||(35459834-35459907)
chr2 (18-90)||(2416246-2416318)
chr2 (8-88)||(9478222-9478302)
chr2 (6-82)||(17952774-17952850)
chr2 (18-93)||(25609729-25609804)
chr2 (9-87)||(3102617-3102695)
chr2 (18-92)||(10143105-10143179)
chr2 (18-67)||(5045245-5045294)
chr2 (24-93)||(13630343-13630412)
chr2 (8-93)||(28803568-28803653)
chr2 (26-82)||(3458598-3458654)
chr2 (12-92)||(3673734-3673814)
chr2 (8-92)||(6926505-6926588)
chr2 (9-89)||(18962104-18962184)
chr2 (49-93)||(31740021-31740065)
chr2 (26-93)||(23143040-23143107)
chr2 (26-93)||(23554830-23554897)
chr2 (10-73)||(31461363-31461426)
chr2 (8-79)||(44606164-44606235)
chr2 (24-82)||(16946981-16947039)
chr2 (24-82)||(17017646-17017704)
chr2 (24-82)||(34339845-34339903)
chr2 (22-92)||(39929804-39929874)
chr2 (27-93)||(43199356-43199422)
chr2 (18-75)||(4026750-4026807)
chr2 (6-79)||(10150676-10150749)
chr2 (4-89)||(11344350-11344435)
chr2 (8-65)||(15173449-15173506)
chr2 (9-90)||(29430680-29430760)
chr2 (4-93)||(35755564-35755653)
chr2 (9-82)||(42817449-42817522)
chr2 (52-88)||(43173189-43173225)
chr2 (29-80)||(1939407-1939458)
chr2 (26-81)||(40837502-40837557)
chr2 (47-93)||(6993786-6993832)
chr2 (18-76)||(7825185-7825243)
chr2 (48-82)||(10646362-10646396)
chr2 (8-82)||(11863723-11863797)
chr2 (4-90)||(13869160-13869246)
chr2 (9-87)||(14209201-14209279)
chr2 (47-93)||(33942112-33942158)
chr2 (6-92)||(37053515-37053601)
chr2 (47-93)||(37292409-37292455)
chr2 (18-68)||(38239638-38239688)
chr2 (9-79)||(40672872-40672942)
chr2 (53-90)||(1160809-1160846)
chr2 (18-75)||(3611159-3611216)
chr2 (8-93)||(4550700-4550785)
chr2 (47-76)||(6988077-6988106)
chr2 (18-79)||(7282951-7283012)
chr2 (12-65)||(13864577-13864630)
chr2 (18-79)||(15171183-15171244)
chr2 (25-90)||(28039397-28039462)
chr2 (24-93)||(32694151-32694220)
chr2 (48-89)||(33944568-33944609)
chr2 (9-70)||(35252207-35252268)
chr2 (8-93)||(37766721-37766806)
chr2 (24-93)||(39983282-39983350)
chr2 (30-75)||(41407246-41407291)
chr2 (8-65)||(43431534-43431591)
chr2 (10-82)||(43808501-43808573)
chr2 (49-93)||(5043622-5043666)
chr2 (15-87)||(6547840-6547912)
chr2 (30-102)||(14666493-14666565)
chr2 (30-90)||(22681250-22681310)
chr2 (24-76)||(23747243-23747295)
chr2 (26-78)||(28933765-28933817)
chr2 (6-77)||(29503161-29503230)
chr2 (24-64)||(44119723-44119763)
chr2 (10-78)||(44458415-44458483)
[»] chr4 (62 HSPs)
chr4 (8-269)||(11917488-11917739)
chr4 (8-93)||(49219062-49219147)
chr4 (13-93)||(4071811-4071890)
chr4 (6-77)||(28581988-28582058)
chr4 (18-93)||(42321941-42322016)
chr4 (9-89)||(30024624-30024704)
chr4 (10-102)||(8422892-8422982)
chr4 (18-89)||(8130107-8130178)
chr4 (50-93)||(13949906-13949949)
chr4 (8-87)||(19422341-19422420)
chr4 (6-93)||(30207633-30207719)
chr4 (22-89)||(44119228-44119295)
chr4 (31-82)||(52735068-52735119)
chr4 (7-90)||(54325102-54325185)
chr4 (9-95)||(41606110-41606196)
chr4 (7-77)||(47970240-47970310)
chr4 (18-68)||(51044546-51044596)
chr4 (18-68)||(55599099-55599149)
chr4 (47-96)||(3549590-3549639)
chr4 (36-93)||(10192235-10192292)
chr4 (8-93)||(24193508-24193593)
chr4 (18-91)||(26883928-26884001)
chr4 (29-90)||(27623579-27623640)
chr4 (9-82)||(36734817-36734890)
chr4 (21-82)||(40865746-40865806)
chr4 (9-66)||(51555956-51556013)
chr4 (10-93)||(32920462-32920543)
chr4 (9-79)||(4191663-4191734)
chr4 (12-79)||(7022595-7022662)
chr4 (47-102)||(18630642-18630697)
chr4 (9-40)||(23819014-23819045)
chr4 (6-93)||(24443959-24444046)
chr4 (47-82)||(32724081-32724116)
chr4 (8-79)||(35743227-35743298)
chr4 (44-87)||(44007940-44007983)
chr4 (47-90)||(46859892-46859935)
chr4 (24-90)||(6364088-6364154)
chr4 (23-89)||(19040181-19040247)
chr4 (8-82)||(22684589-22684663)
chr4 (18-92)||(46013363-46013437)
chr4 (18-92)||(46247151-46247225)
chr4 (47-93)||(47119027-47119073)
chr4 (54-92)||(53192416-53192454)
chr4 (53-87)||(55437354-55437388)
chr4 (8-64)||(15511425-15511482)
chr4 (15-67)||(15969833-15969886)
chr4 (56-89)||(24091434-24091467)
chr4 (24-93)||(24160929-24160998)
chr4 (8-93)||(24929416-24929501)
chr4 (48-93)||(25434522-25434567)
chr4 (24-89)||(45128376-45128441)
chr4 (25-82)||(49803151-49803208)
chr4 (24-93)||(50745939-50746008)
chr4 (28-90)||(53626717-53626781)
chr4 (47-87)||(20936070-20936110)
chr4 (24-68)||(21193937-21193981)
chr4 (54-90)||(21952930-21952966)
chr4 (8-40)||(27321946-27321978)
chr4 (20-68)||(27968072-27968120)
chr4 (34-82)||(29194476-29194524)
chr4 (13-89)||(43372035-43372111)
chr4 (37-93)||(55870403-55870459)
[»] chr8 (49 HSPs)
chr8 (9-81)||(41620365-41620437)
chr8 (18-90)||(4558731-4558803)
chr8 (8-93)||(38561649-38561734)
chr8 (9-82)||(38874570-38874643)
chr8 (26-90)||(1470921-1470985)
chr8 (8-68)||(40728505-40728565)
chr8 (8-87)||(11494076-11494155)
chr8 (8-75)||(14482125-14482192)
chr8 (8-79)||(40357822-40357893)
chr8 (4-82)||(7026650-7026728)
chr8 (28-90)||(26820142-26820204)
chr8 (16-82)||(29056064-29056130)
chr8 (47-93)||(34770854-34770900)
chr8 (9-70)||(2364558-2364619)
chr8 (8-89)||(31884517-31884598)
chr8 (9-93)||(35298539-35298624)
chr8 (24-93)||(42597340-42597409)
chr8 (24-80)||(12224974-12225030)
chr8 (3-79)||(14949806-14949882)
chr8 (50-82)||(29262947-29262979)
chr8 (47-82)||(2100767-2100802)
chr8 (9-68)||(29699178-29699237)
chr8 (18-93)||(29973014-29973089)
chr8 (4-79)||(34563169-34563244)
chr8 (6-93)||(35869758-35869845)
chr8 (8-79)||(40280281-40280352)
chr8 (38-89)||(42237488-42237539)
chr8 (47-93)||(3537093-3537139)
chr8 (18-92)||(3945207-3945281)
chr8 (24-90)||(12361131-12361197)
chr8 (24-82)||(26215435-26215493)
chr8 (48-82)||(27728094-27728128)
chr8 (9-75)||(31315533-31315598)
chr8 (24-82)||(41336718-41336776)
chr8 (17-90)||(1112785-1112858)
chr8 (6-63)||(10939328-10939385)
chr8 (8-93)||(11056729-11056814)
chr8 (26-90)||(31705025-31705090)
chr8 (9-90)||(33209285-33209366)
chr8 (8-89)||(34788493-34788574)
chr8 (9-89)||(787172-787252)
chr8 (10-82)||(2699231-2699303)
chr8 (54-90)||(7878551-7878587)
chr8 (20-64)||(10062218-10062262)
chr8 (52-96)||(11376670-11376714)
chr8 (6-82)||(11415075-11415151)
chr8 (49-89)||(35374439-35374479)
chr8 (8-68)||(39392748-39392808)
chr8 (4-68)||(40356790-40356854)
[»] chr3 (64 HSPs)
chr3 (10-93)||(37788786-37788868)
chr3 (4-81)||(38462200-38462277)
chr3 (7-82)||(33307653-33307728)
chr3 (5-76)||(49772747-49772818)
chr3 (25-87)||(1395611-1395673)
chr3 (9-79)||(16790432-16790502)
chr3 (27-93)||(29771751-29771817)
chr3 (9-91)||(43116492-43116574)
chr3 (3-75)||(39971237-39971309)
chr3 (8-79)||(3182438-3182509)
chr3 (6-93)||(22214743-22214830)
chr3 (8-79)||(44374720-44374791)
chr3 (26-93)||(48397587-48397654)
chr3 (8-82)||(20349549-20349623)
chr3 (47-93)||(32555043-32555089)
chr3 (18-87)||(36783402-36783472)
chr3 (18-79)||(3757981-3758042)
chr3 (21-82)||(4990630-4990691)
chr3 (18-90)||(20192671-20192743)
chr3 (9-89)||(32703062-32703142)
chr3 (30-89)||(37689450-37689509)
chr3 (27-93)||(24235745-24235811)
chr3 (18-68)||(24605103-24605153)
chr3 (24-78)||(48364956-48365010)
chr3 (6-93)||(23530246-23530335)
chr3 (47-80)||(25195386-25195419)
chr3 (9-82)||(27792796-27792869)
chr3 (8-93)||(28779279-28779364)
chr3 (17-82)||(53736186-53736251)
chr3 (9-82)||(54775052-54775125)
chr3 (49-93)||(2865721-2865765)
chr3 (18-62)||(8142803-8142847)
chr3 (30-82)||(10101549-10101601)
chr3 (30-82)||(10212474-10212526)
chr3 (21-89)||(30669036-30669104)
chr3 (10-82)||(36646455-36646527)
chr3 (18-89)||(21574425-21574495)
chr3 (4-75)||(32064359-32064430)
chr3 (9-80)||(32663566-32663636)
chr3 (22-68)||(36283659-36283703)
chr3 (8-67)||(41028939-41028998)
chr3 (8-82)||(22232749-22232823)
chr3 (6-88)||(25129752-25129833)
chr3 (5-90)||(25183053-25183139)
chr3 (47-81)||(26990696-26990730)
chr3 (29-87)||(49586984-49587042)
chr3 (9-79)||(53457301-53457371)
chr3 (22-75)||(2128331-2128384)
chr3 (52-93)||(3467450-3467491)
chr3 (9-62)||(16790181-16790234)
chr3 (9-81)||(24268228-24268301)
chr3 (47-92)||(26599140-26599185)
chr3 (26-75)||(33882969-33883018)
chr3 (8-93)||(36101491-36101576)
chr3 (24-93)||(40122815-40122883)
chr3 (18-67)||(49546575-49546624)
chr3 (18-79)||(52413197-52413258)
chr3 (10-82)||(905043-905115)
chr3 (13-89)||(8007761-8007837)
chr3 (30-82)||(10357378-10357430)
chr3 (30-82)||(15304420-15304472)
chr3 (50-90)||(23315591-23315631)
chr3 (18-66)||(42039092-42039140)
chr3 (26-82)||(42809242-42809298)
[»] chr5 (51 HSPs)
chr5 (8-92)||(35135725-35135809)
chr5 (7-93)||(36539668-36539754)
chr5 (11-79)||(7096203-7096271)
chr5 (18-93)||(9927518-9927593)
chr5 (7-90)||(32059654-32059736)
chr5 (9-82)||(4991016-4991089)
chr5 (24-81)||(38047929-38047986)
chr5 (18-82)||(9202821-9202885)
chr5 (20-67)||(5284762-5284809)
chr5 (19-96)||(34117595-34117669)
chr5 (8-93)||(912710-912796)
chr5 (11-93)||(18704098-18704179)
chr5 (24-82)||(37063147-37063205)
chr5 (36-102)||(42181145-42181211)
chr5 (9-82)||(6733966-6734038)
chr5 (4-61)||(10391272-10391329)
chr5 (25-90)||(36796771-36796836)
chr5 (18-90)||(10907312-10907384)
chr5 (8-64)||(12407752-12407807)
chr5 (47-87)||(32969185-32969225)
chr5 (9-93)||(35960338-35960421)
chr5 (21-68)||(1636844-1636891)
chr5 (47-82)||(8158374-8158409)
chr5 (30-93)||(9703302-9703365)
chr5 (47-86)||(10303763-10303802)
chr5 (47-90)||(14295468-14295511)
chr5 (9-76)||(17756808-17756875)
chr5 (8-67)||(20982223-20982282)
chr5 (24-87)||(29116998-29117061)
chr5 (47-90)||(35550911-35550953)
chr5 (47-82)||(39750105-39750140)
chr5 (50-92)||(583836-583878)
chr5 (48-93)||(3952061-3952104)
chr5 (4-78)||(6738484-6738558)
chr5 (18-76)||(11835210-11835268)
chr5 (4-62)||(13224348-13224406)
chr5 (8-90)||(32172576-32172658)
chr5 (47-93)||(39823183-39823229)
chr5 (18-76)||(40048359-40048417)
chr5 (24-93)||(4855637-4855706)
chr5 (48-93)||(10272493-10272538)
chr5 (29-70)||(11615452-11615493)
chr5 (18-75)||(14932223-14932280)
chr5 (52-93)||(34205206-34205247)
chr5 (8-57)||(38033891-38033940)
chr5 (24-89)||(39128578-39128643)
chr5 (47-87)||(12595808-12595848)
chr5 (18-62)||(17498668-17498712)
chr5 (9-93)||(19177403-19177487)
chr5 (18-70)||(21782654-21782706)
chr5 (10-82)||(28586839-28586911)
[»] chr1 (60 HSPs)
chr1 (6-88)||(4200150-4200232)
chr1 (17-93)||(15360826-15360902)
chr1 (7-93)||(28467369-28467457)
chr1 (8-91)||(45990122-45990205)
chr1 (21-90)||(49517006-49517075)
chr1 (9-89)||(44032065-44032145)
chr1 (21-89)||(48830142-48830210)
chr1 (8-79)||(7274015-7274086)
chr1 (8-82)||(870968-871042)
chr1 (13-70)||(289168-289225)
chr1 (12-93)||(17269177-17269258)
chr1 (24-93)||(29007778-29007847)
chr1 (20-87)||(29793991-29794057)
chr1 (6-93)||(49557062-49557149)
chr1 (47-89)||(27738246-27738288)
chr1 (47-93)||(30371110-30371156)
chr1 (9-75)||(33339500-33339566)
chr1 (20-89)||(4256108-4256177)
chr1 (48-93)||(7218136-7218181)
chr1 (32-89)||(44936656-44936713)
chr1 (9-82)||(46980202-46980275)
chr1 (18-82)||(1232965-1233029)
chr1 (18-74)||(1730825-1730881)
chr1 (47-87)||(10439648-10439688)
chr1 (18-82)||(11560622-11560686)
chr1 (31-79)||(14737781-14737829)
chr1 (50-90)||(15361678-15361718)
chr1 (8-64)||(16982027-16982083)
chr1 (50-102)||(29723454-29723506)
chr1 (24-72)||(36641814-36641862)
chr1 (24-88)||(50998491-50998555)
chr1 (24-87)||(4215311-4215374)
chr1 (47-90)||(9656612-9656655)
chr1 (54-93)||(25006096-25006135)
chr1 (23-82)||(36151578-36151637)
chr1 (19-82)||(42336596-42336659)
chr1 (48-79)||(45234160-45234191)
chr1 (47-90)||(47877084-47877127)
chr1 (24-79)||(50319231-50319286)
chr1 (47-93)||(5421982-5422028)
chr1 (48-93)||(5592747-5592792)
chr1 (26-79)||(6933037-6933090)
chr1 (29-82)||(11211062-11211115)
chr1 (9-62)||(11218175-11218228)
chr1 (24-89)||(17420142-17420207)
chr1 (8-81)||(23895259-23895332)
chr1 (5-90)||(30259552-30259637)
chr1 (9-78)||(36602714-36602783)
chr1 (24-89)||(43372025-43372090)
chr1 (48-93)||(45205031-45205076)
chr1 (8-89)||(52286601-52286682)
chr1 (8-68)||(10854656-10854716)
chr1 (18-82)||(27140418-27140482)
chr1 (18-86)||(37818397-37818465)
chr1 (29-81)||(38867907-38867959)
chr1 (47-87)||(41516148-41516188)
chr1 (6-66)||(41638399-41638459)
chr1 (10-82)||(45107548-45107619)
chr1 (7-75)||(46499934-46500002)
chr1 (26-82)||(52559901-52559957)
[»] scaffold0024 (2 HSPs)
scaffold0024 (8-93)||(27499-27584)
scaffold0024 (24-82)||(21351-21409)
[»] chr7 (74 HSPs)
chr7 (22-79)||(8680929-8680986)
chr7 (8-92)||(49060463-49060547)
chr7 (4-93)||(9527152-9527241)
chr7 (24-93)||(45813242-45813311)
chr7 (9-81)||(30751441-30751513)
chr7 (22-93)||(1417201-1417272)
chr7 (18-93)||(30496637-30496712)
chr7 (19-89)||(23918891-23918961)
chr7 (18-68)||(39505890-39505940)
chr7 (4-93)||(5010530-5010619)
chr7 (29-82)||(39591540-39591593)
chr7 (8-93)||(44241783-44241867)
chr7 (9-82)||(45593792-45593865)
chr7 (18-82)||(30133982-30134046)
chr7 (18-89)||(28165024-28165095)
chr7 (47-90)||(31002723-31002766)
chr7 (47-90)||(40689051-40689094)
chr7 (18-68)||(5939017-5939067)
chr7 (9-79)||(7244626-7244696)
chr7 (9-90)||(7453462-7453544)
chr7 (24-82)||(35536046-35536104)
chr7 (9-82)||(991994-992067)
chr7 (24-93)||(3501028-3501097)
chr7 (9-82)||(22759110-22759183)
chr7 (9-90)||(47004011-47004092)
chr7 (24-87)||(1432032-1432098)
chr7 (8-80)||(2223071-2223143)
chr7 (8-92)||(25511550-25511634)
chr7 (47-91)||(30456514-30456558)
chr7 (30-74)||(41875864-41875908)
chr7 (22-102)||(48157173-48157253)
chr7 (47-90)||(12835002-12835045)
chr7 (50-89)||(22296294-22296333)
chr7 (59-102)||(24895330-24895373)
chr7 (9-92)||(27481357-27481440)
chr7 (16-82)||(5272893-5272959)
chr7 (18-68)||(5276157-5276207)
chr7 (59-93)||(24909638-24909672)
chr7 (11-81)||(24973870-24973940)
chr7 (24-82)||(27121659-27121717)
chr7 (4-90)||(27548182-27548268)
chr7 (24-77)||(31149586-31149640)
chr7 (24-77)||(31167878-31167932)
chr7 (18-68)||(35808991-35809041)
chr7 (23-77)||(36532289-36532343)
chr7 (10-88)||(38496583-38496659)
chr7 (47-93)||(45777233-45777279)
chr7 (48-82)||(46825061-46825095)
chr7 (8-69)||(1431394-1431455)
chr7 (4-93)||(3610802-3610891)
chr7 (47-76)||(3635927-3635956)
chr7 (25-82)||(5006582-5006639)
chr7 (8-93)||(5373148-5373233)
chr7 (25-82)||(7623078-7623135)
chr7 (9-74)||(8445210-8445275)
chr7 (21-82)||(27626197-27626258)
chr7 (26-79)||(28178910-28178963)
chr7 (4-93)||(28440438-28440527)
chr7 (24-93)||(28613596-28613665)
chr7 (8-89)||(39551614-39551695)
chr7 (48-89)||(40428518-40428559)
chr7 (25-81)||(1373614-1373670)
chr7 (18-74)||(5269463-5269519)
chr7 (18-62)||(14823938-14823982)
chr7 (18-62)||(15270945-15270989)
chr7 (14-70)||(20476595-20476651)
chr7 (18-54)||(25507284-25507320)
chr7 (18-54)||(25558290-25558326)
chr7 (18-54)||(25558488-25558524)
chr7 (24-68)||(31341133-31341177)
chr7 (18-82)||(33894556-33894619)
chr7 (30-90)||(38010659-38010719)
chr7 (50-90)||(39908059-39908099)
chr7 (4-40)||(47528048-47528084)
[»] chr6 (50 HSPs)
chr6 (9-82)||(3217263-3217336)
chr6 (18-92)||(24836262-24836336)
chr6 (8-89)||(29274295-29274376)
chr6 (31-90)||(2027471-2027530)
chr6 (12-68)||(32975905-32975961)
chr6 (10-93)||(10452422-10452505)
chr6 (6-82)||(8349737-8349813)
chr6 (48-92)||(27595630-27595674)
chr6 (18-93)||(4006647-4006722)
chr6 (7-90)||(10032493-10032576)
chr6 (31-89)||(7785808-7785866)
chr6 (24-90)||(22742305-22742371)
chr6 (4-81)||(28660160-28660238)
chr6 (4-80)||(1497899-1497976)
chr6 (9-82)||(5328898-5328971)
chr6 (8-69)||(28531627-28531688)
chr6 (27-87)||(2206532-2206592)
chr6 (8-92)||(2514625-2514709)
chr6 (10-82)||(7713950-7714022)
chr6 (13-93)||(11340687-11340767)
chr6 (18-82)||(20671938-20672002)
chr6 (9-89)||(21959652-21959732)
chr6 (50-82)||(27693512-27693544)
chr6 (47-90)||(281913-281956)
chr6 (8-90)||(10400192-10400274)
chr6 (47-82)||(27713469-27713504)
chr6 (29-68)||(27857319-27857358)
chr6 (19-82)||(32513759-32513821)
chr6 (47-89)||(1402958-1403000)
chr6 (47-93)||(2117365-2117411)
chr6 (12-82)||(7354131-7354201)
chr6 (24-90)||(9093621-9093687)
chr6 (48-82)||(10749301-10749335)
chr6 (24-82)||(24476541-24476599)
chr6 (36-82)||(28660833-28660879)
chr6 (9-79)||(31672544-31672614)
chr6 (19-93)||(34429752-34429826)
chr6 (6-59)||(2023725-2023778)
chr6 (53-82)||(2732312-2732341)
chr6 (9-90)||(3155100-3155181)
chr6 (9-82)||(4325381-4325454)
chr6 (10-59)||(5554861-5554910)
chr6 (48-93)||(11363430-11363475)
chr6 (28-68)||(2027891-2027931)
chr6 (14-82)||(2034512-2034579)
chr6 (8-68)||(8420284-8420344)
chr6 (24-76)||(9559620-9559672)
chr6 (14-78)||(29940725-29940789)
chr6 (18-58)||(33116538-33116578)
chr6 (7-75)||(34405027-34405095)
[»] scaffold0590 (1 HSPs)
scaffold0590 (10-82)||(1147-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (10-82)||(2756-2828)
[»] scaffold0103 (1 HSPs)
scaffold0103 (25-89)||(51508-51572)
[»] scaffold0015 (1 HSPs)
scaffold0015 (44-82)||(69016-69054)
[»] scaffold0085 (1 HSPs)
scaffold0085 (48-89)||(34063-34104)
[»] scaffold0549 (2 HSPs)
scaffold0549 (13-93)||(1786-1866)
scaffold0549 (13-93)||(3876-3956)
[»] scaffold0349 (1 HSPs)
scaffold0349 (47-82)||(18440-18475)
[»] scaffold0508 (1 HSPs)
scaffold0508 (8-82)||(9848-9922)
[»] scaffold0654 (1 HSPs)
scaffold0654 (6-79)||(6713-6786)
[»] scaffold0287 (1 HSPs)
scaffold0287 (47-76)||(10129-10158)
[»] scaffold0221 (1 HSPs)
scaffold0221 (25-82)||(20235-20292)
[»] scaffold0153 (2 HSPs)
scaffold0153 (53-90)||(6563-6600)
scaffold0153 (53-90)||(13583-13620)
[»] scaffold0060 (1 HSPs)
scaffold0060 (9-74)||(63366-63431)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-79)||(116632-116705)


Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 269
Target Start/End: Complemental strand, 3423915 - 3423656
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattgg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423915 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattgg 3423816  T
Q  108 ttctcgtctaaatatatatacatactattgatnnnnnnnntattggtgctatgagtcgcccctaacacccgtgcttagggtcatcaccgtttgtacccgt 207  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||    
T  3423815 ttctcgtctaaatatatatacatactattgat--aaaaaatattggtgctatgagtcgccccaaacacccgcgcttagggtcatcaccgtttgtaccggt 3423718  T
Q  208 ggattagatcaaataagactttaaaatacaaatgaaaagtatatgagcatacctttttgtca 269  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423717 agattagatcaaataagactttaaaatacaaatgaaaagtatatgagcatacctttttgtca 3423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 15866815 - 15866733
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||| | || ||||||||||| |||||||    
T  15866815 cttatcatacaagtgtttgtgtataagttatttttgtaacaaaatgtaaaataaagtcgacttgttttcatataagctataag 15866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 11513822 - 11513906
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||| ||||||||||||||||||     | |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11513822 cacttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttg 11513906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 35459834 - 35459907
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| || |||||||| ||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  35459834 ttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataa 35459907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 2416246 - 2416318
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||| ||||| |||| |||||| |||||||    
T  2416246 aagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataag 2416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 9478222 - 9478302
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 88  Q
    ||||||||| ||||||||||||||||| ||||| | || ||  |||||||||||| ||||| ||||||||||||| |||||    
T  9478222 cttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 17952850 - 17952774
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||| | |||| |||||| ||||| | || |||||||||||||||||||||| |||||||||||||    
T  17952850 cacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataa 17952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 25609729 - 25609804
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||| ||||||||||| ||||| | ||  |||||||||||||||||||| |||||||| ||||| ||||||||||    
T  25609729 aagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttg 25609804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 3102617 - 3102695
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||| || || ||||||||||| ||||||| || ||||| |||||||||||||||| |||||| |||||| ||||    
T  3102617 ttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctat 3102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 10143105 - 10143179
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||| ||||||||||||||||| | || ||||||||||||| |||||||| | |||| |||||| |||||||||    
T  10143105 aagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtt 10143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 5045294 - 5045245
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 67  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  5045294 aagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 13630412 - 13630343
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||| | || |||||||||| ||||||||||| | ||||||||||| | ||||||||    
T  13630412 ttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttg 13630343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 28803653 - 28803568
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| ||||| |||| ||||||||||||   || |||||||||||||||||||||| |  |||||||||| ||| ||||||    
T  28803653 cttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttg 28803568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 3458598 - 3458654
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||| |||||||||||| || |||||||||||||||||||||| | |||||||||||    
T  3458598 atgtctaagttatttttataacaaaagataaaataaagtcaaacttttttcatataa 3458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 3673734 - 3673814
Alignment:
Q  12 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||| ||||| |||||||| |||||||| | || ||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtt 3673814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 6926588 - 6926505
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||| || ||||||||||||||| |||| |  |  |||||||||||||| |||||||| ||||||||||| |||||||||    
T  6926588 cttatcatataaatgtttatgtataagtcatttgtacaagaaaagataaaataa-gtcaaattgttttcatataaactataagtt 6926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 18962184 - 18962104
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||  ||||| |||||||| || ||||||| || |||||||||||||||||| ||| | ||||||||||| ||||||    
T  18962184 ttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 31740065 - 31740021
Alignment:
Q  49 aaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataagttg 31740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 23143107 - 23143040
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23143040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 23554897 - 23554830
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23554830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 31461363 - 31461426
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatt 73  Q
    ||||||| ||||| |||| |||||| ||||| | || |||||||||||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 44606235 - 44606164
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||| ||| ||||||||||||||||| ||||||  || ||||||||||||||||| | |||| ||||||||    
T  44606235 cttattatataagtgtttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcata 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 16946981 - 16947039
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  16946981 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 16947039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 17017646 - 17017704
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  17017646 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 17017704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 34339845 - 34339903
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||| |||||| |||||  | |||||||||||||||||||||||||||||| |||||    
T  34339845 ttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataa 34339903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 39929804 - 39929874
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||||| ||||||||||| || || ||||||||||||| || ||||||| |||| |||||| |||||||||    
T  39929804 gtttatttataagttattgttataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 43199356 - 43199422
Alignment:
Q  27 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||| |  | |||||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttg 43199422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 4026750 - 4026807
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||| |||| |||||| ||||||| || |||||||||||||||||| ||||||||||    
T  4026750 aagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 10150676 - 10150749
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||| ||| ||||||||||||||||||||||| | ||  |||||||||||||| || ||||  ||||||||    
T  10150676 cacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcata 10150749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 11344435 - 11344350
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||| | ||| ||||| ||||| ||||| ||||| | || |||||||||||| ||||||||||| |||||||| || ||||||    
T  11344435 aacacttgttatataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataa 11344350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 15173449 - 15173506
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 65  Q
    |||||| ||||||||| |||||||||||||||| | || |||||||| ||||||||||    
T  15173449 cttatcgtacaagtgtctatgtataagttatttctataacaaaagatgaaataaagtc 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 29430680 - 29430760
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||| ||||||||||||| ||||| | || |||||| | ||||||||||||| | ||||| ||||| |||||||    
T  29430680 ttatcatacaagggtttatgtataagctatttctataacaaaag-ttaaataaagtcaaactgttttcttataagctataag 29430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 35755653 - 35755564
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||| || || ||||||||||||||||| ||||| | ||   ||| | |||||||||||||||| ||||||| ||| ||||||||||    
T  35755653 aacacttgtcgtataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttg 35755564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 42817522 - 42817449
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||||| || |||| ||||||| | |||||||||||||||| |||||||  | |||||||||||    
T  42817522 ttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataa 42817449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 43173189 - 43173225
Alignment:
Q  52 gataaaataaagtcaaattattttcatataacctata 88  Q
    ||||||||||||||||||||||||||||||| |||||    
T  43173189 gataaaataaagtcaaattattttcatataagctata 43173225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 1939458 - 1939407
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 80  Q
    |||||||||||| | || |||||||||||||||||| ||| |||||||||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    ||||||||| ||||| | || ||||||||||| |||||||||||| ||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 6993832 - 6993786
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  6993832 caaaagataaaataaggtcaaattatattcatataagctataggttg 6993786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 7825185 - 7825243
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    |||||||| |||||||| ||||||| || ||||||||||| |||||| ||||| |||||    
T  7825185 aagtgtttctgtataagctatttttataacaaaagataaagtaaagttaaatttttttc 7825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 10646396 - 10646362
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||||||||||||||| |||||    
T  10646396 aaaagataaaataaagtcaaattattttcctataa 10646362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 11863797 - 11863723
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||| ||| ||||| |||||||| ||||| ||||  | |||||||||||||| ||| ||||| |||||||||||    
T  11863797 cttattatataagtggttatgtatgagttagttttacagcaaaagataaaatagagttaaattgttttcatataa 11863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 13869246 - 13869160
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||| |||| |||||| ||||| ||||| | |  ||| |||||||| | | ||||||||||||||| ||| |||||||    
T  13869246 aacacttatcatagaagtatttatgcataagctatttctatgacaagagataaaagacattcaaattattttcatctaagctataag 13869160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 14209201 - 14209279
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||| |||||||| ||| |||| |||||   || |||||||||||||||| ||||| | ||||||||||| ||||    
T  14209201 ttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 33942112 - 33942158
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttg 33942158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 37053515 - 37053601
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||||| ||||| |||||||||   ||||| | || || || |||||||||||||||| | |||||||||||  ||||||||    
T  37053515 cacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtt 37053601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 37292455 - 37292409
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||| ||| ||||||||||||| |||| |||||    
T  37292455 caaaagataaaataaagtaaaactattttcatataagctattagttg 37292409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 38239688 - 38239638
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||||||||| ||||| | || ||||||||||||| ||||||||    
T  38239688 aagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 40672942 - 40672872
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||  |||| |||||||||||||||||| | |   ||||||||||||||||||| ||| ||||||||    
T  40672942 ttatcatttaagtttttatgtataagttatttctatgaaaaaagataaaataaagtcacattgttttcata 40672872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 1160846 - 1160809
Alignment:
Q  53 ataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  1160846 ataaaataaagtcaaactattttcatataagctataag 1160809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 3611159 - 3611216
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||| ||||||||||||||||| | || |||||| ||||||||||| ||||| ||||    
T  3611159 aagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 4550700 - 4550785
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||| | ||||| ||||||||||||| |||   ||  |||||||||||||| |||||  | ||||||||||| ||||||||||    
T  4550700 cttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataagttg 4550785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 76
Target Start/End: Original strand, 6988077 - 6988106
Alignment:
Q  47 caaaagataaaataaagtcaaattattttc 76  Q
    ||||||||||||||||||||||||||||||    
T  6988077 caaaagataaaataaagtcaaattattttc 6988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 7282951 - 7283012
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||||||||||| ||||||| ||  |||||| ||||| |||||||| | ||||||||    
T  7282951 aagtgtttatgtataagctatttttataagaaaagaaaaaatgaagtcaaactgttttcata 7283012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 13864577 - 13864630
Alignment:
Q  12 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 65  Q
    ||||| ||||||||||||||||| ||||| | || |||||| ||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 15171183 - 15171244
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||||||||||||| ||| | || || |||||||| |||||||||| | ||||||||    
T  15171183 aagtgtttatgtataagttttttctataacagaagataaattaaagtcaaaatgttttcata 15171244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 28039462 - 28039397
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| ||||| |||||| ||  || |||||||||||||||| |||| ||||||||||| |||||||    
T  28039462 tatgaataagctattttggttacacaagataaaataaagtccaattgttttcatataaactataag 28039397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 32694151 - 32694220
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||| | || |||||||||||||||| ||| | |||||| ||||||  |||||||||    
T  32694151 ttatgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttg 32694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 33944568 - 33944609
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  33944568 aaaatataaaataaagtcaaattgttttcatataagctataa 33944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 35252268 - 35252207
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 70  Q
    |||||||| || |||||||||||| ||||||  | ||  |||||||||||||||||||||||    
T  35252268 ttatcatataaatgtttatgtatatgttattcctttaataaaagataaaataaagtcaaatt 35252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 37766721 - 37766806
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| ||||| |||||||| || ||||  | |  ||||| |||||||||||||||| | ||||| ||||| ||||||||||    
T  37766721 cttatcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttg 37766806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 39983282 - 39983350
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| |||||| |||||||||| |||| | ||||||||| | |||| |||||||||||| ||||||||||    
T  39983282 ttatatataagctatttttgtaacaaagg-taaaataaaataaaataattttcatataagctataagttg 39983350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 41407246 - 41407291
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgtttt 41407291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 43431591 - 43431534
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 65  Q
    ||||||||| ||||||| |||||||||||||||   || ||||||||||| |||||||    
T  43431591 cttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtc 43431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 43808501 - 43808573
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttg-taccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| ||||||||||||||||| |||||||  || ||||  |||||||||||| ||| |||||||||||||    
T  43808501 tatcatataagtgtttatgtataagctattttttataacaaac-ataaaataaagttaaactattttcatataa 43808573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 5043666 - 5043622
Alignment:
Q  49 aaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttg 5043622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 6547840 - 6547912
Alignment:
Q  15 tacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||||  |||||||||||||| | || ||||||  |||| ||||||||| |||||| |||||| ||||    
T  6547840 tacaagtgttcgtgtataagttatttctatagcaaaagtcaaaacaaagtcaaaatatttttatataagctat 6547912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 14666493 - 14666565
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    ||||||| ||||  || |||||||||||||||||||||| |  ||||||||||  ||||||||| || |||||    
T  14666493 ataagttgttttgataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaa 14666565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 22681310 - 22681250
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  22681310 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 22681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 23747243 - 23747295
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    ||||||||||| ||||||| || ||||||||||||| || | |||||||||||    
T  23747243 ttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttc 23747295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 28933765 - 28933817
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 78  Q
    ||||||||| ||||| | || ||||||||||||| || |||||||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcat 28933817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 29503230 - 29503161
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 77  Q
    ||||||| ||| ||||||||||||||| | ||||| | || |||  ||||||||||||||||| ||||||||    
T  29503230 cacttattatagaagtgtttatgtatatgatatttctataacaa--gataaaataaagtcaaactattttca 29503161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 44119723 - 44119763
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagt 64  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  44119723 ttatgtataagttatttttatagtaaaagataaaataaagt 44119763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 44458483 - 44458415
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 78  Q
    ||||||| |||| |||||||||||| |||||||  | ||| ||||||| |||||||||  |||||||||    
T  44458483 tatcatataagtatttatgtataagctattttttcaacaacagataaactaaagtcaagctattttcat 44458415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 7e-61; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 8 - 269
Target Start/End: Original strand, 11917488 - 11917739
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattgg 107  Q
    ||||||||||||||||||||||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11917488 cttatcatacaagtgtttatgt------tatttttgtaacaaaagataaaataaagtcaaattattttcatataacctataagttgcttacaaaaattgg 11917581  T
Q  108 ttctcgtctaaatatatatacatactattgatnnnnnnnntattggtgctatgagtcgcccctaacacccgtgcttagggtcatcaccgtttgtacccgt 207  Q
    ||||||||||||||| ||||||||||||| |         |||||  ||||||| ||||||||| |||| | |||||||||||||||  |||||||| ||    
T  11917582 ttctcgtctaaatatttatacatactattaa---aaaaaatattgccgctatgattcgcccctaccacctgcgcttagggtcatcactttttgtaccagt 11917678  T
Q  208 ggattagatcaaataagactttaaaatacaaatgaaaagtatatgagcatacctttttgtca 269  Q
     ||| |  ||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||    
T  11917679 agataaattcaaataagcctttaaaacacaaatg-aaagtatatgagcctacctttttgtca 11917739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 49219062 - 49219147
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||  |||| ||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  49219062 cttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttg 49219147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 4071811 - 4071890
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| |||||||||| ||||| | |||| | || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  4071811 catataagtgtttatatataact-atttctataacaaaagataaaataaagtcaaattattttcatataagctataagttg 4071890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 28582058 - 28581988
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 77  Q
    ||||||||||| ||||||||||||||||  ||||||| || |||||||||||||||||||||| ||||||||    
T  28582058 cacttatcatagaagtgtttatgtataaactattttt-tagcaaaagataaaataaagtcaaactattttca 28581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 42322016 - 42321941
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||| ||||||| || |||| ||||||||||||||||||| |||||||||||  |||||||||    
T  42322016 aagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttg 42321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 30024624 - 30024704
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||| ||||  ||||| ||||||||||| | || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  30024624 ttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 8422982 - 8422892
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    ||||||| | ||| ||||||||||| ||||||| ||  ||||||||||||||||||  ||| ||||||||||| |||||||||| || |||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataagttgttttcacaa 8422892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 8130107 - 8130178
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||| ||| |||| |||| ||| | || |||||||||| ||||||||||||||||||||||||| ||||||    
T  8130107 aagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataa 8130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 13949949 - 13949906
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttg 13949906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 19422341 - 19422420
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||| || || ||||||||||||||||| | || ||||||||| ||||||||||||   ||||||||||| ||||    
T  19422341 cttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 30207719 - 30207633
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||| ||||||||| |||| || | || ||||| |||||||||| ||||| | ||||||||||| ||||||||||    
T  30207719 cacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttg 30207633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 44119295 - 44119228
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||||||||||| | || |||||||||||| ||||||||  | ||||||||||| ||||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 52735068 - 52735119
Alignment:
Q  31 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||| ||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataa 52735119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 54325185 - 54325102
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||| ||||| || |||||||  ||||| | |  |||||||||||||||||||||| | ||||||||||| |||||||    
T  54325185 acttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 41606110 - 41606196
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgct 95  Q
    |||||||||||||||||||||| ||  ||||||  || |||| ||||||||||||||||||  || | |||||| ||||||| ||||    
T  41606110 ttatcatacaagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaaatggttcttatataagctataagctgct 41606196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 47970240 - 47970310
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 77  Q
    |||| ||||| ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| ||||||||    
T  47970240 acttgtcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 51044596 - 51044546
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||||||||| ||||| | || ||||||||||||||||||||||    
T  51044596 aagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 55599099 - 55599149
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  55599099 aagtgtttatatataagttacttttgtaacaaaagacaaaataaagtcaaa 55599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 3549639 - 3549590
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttgctt 96  Q
    ||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  3549639 caaaagataaaatcaaatcaaatgattttcatataacctatgagttgctt 3549590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 10192235 - 10192292
Alignment:
Q  36 tatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||| || ||||||||| |||||||||||||| |||||||||||  |||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttg 10192292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 24193508 - 24193593
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| ||||  |||||||||||||||||||  | ||||| |||||| | ||| ||| |||||||||||||  |||||||||    
T  24193508 cttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagttaaactattttcatataagttataagttg 24193593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 26883928 - 26884001
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 91  Q
    ||||| ||||||||||||||||| | ||  || ||||||||| |||| ||||| ||||||||||| ||||||||    
T  26883928 aagtgattatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagt 26884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 27623579 - 27623640
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||| ||||| | || |||||||||||||||||||||| |||||| |||||| |||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 36734817 - 36734890
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| ||||||||||  | ||| | || |||||| ||||||||||||||| |||||||||||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 40865746 - 40865806
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||  ||||||| || ||||||||| |||||||||||| |||||||||||||    
T  40865746 tgtttatgtataaactatttttctaacaaaagatagaataaagtcaaa-tattttcatataa 40865806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 66  Q
    |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 32920543 - 32920462
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||| ||||||||||| ||||| ||||||| || |||  ||||||||||||||||||  |||| ||| || ||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataacaa--gataaaataaagtcaaatcgttttaatagaagctataagttg 32920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 4191663 - 4191734
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcata 79  Q
    |||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||| | ||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 7022595 - 7022662
Alignment:
Q  12 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||| ||||| |||  |||||| ||||||| ||  ||||||||||||| ||||||||||||||||||    
T  7022595 tcatataagtgcttaattataagctatttttataagaaaagataaaatagagtcaaattattttcata 7022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 18630642 - 18630697
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||| || |||||    
T  18630642 caaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaa 18630697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 23819014 - 23819045
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttattt 40  Q
    ||||||||||||||||||||||||||||||||    
T  23819014 ttatcatacaagtgtttatgtataagttattt 23819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 24443959 - 24444046
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  24443959 cacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 24444046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 32724081 - 32724116
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||| |||||||||||||    
T  32724081 caaaagataaaataaagtcaaactattttcatataa 32724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 35743227 - 35743298
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||| | ||||| ||||| ||||||||| | || ||||||||||||||||| |||| || |||||||    
T  35743227 cttatcatatatgtgttgatgtacaagttatttctataacaaaagataaaataaaggcaaactactttcata 35743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 44007983 - 44007940
Alignment:
Q  44 taccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||    
T  44007983 taccaaaagataaaataaagacaaattgttttcatataagctat 44007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 46859892 - 46859935
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  46859892 caaaagataaaataaagtcaaatcattttcatacaatctataag 46859935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 6364088 - 6364154
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| | |||| |||| |||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataag 6364154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 19040247 - 19040181
Alignment:
Q  23 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||| ||||| | ||  ||||||||||||||||||||| || ||||||| || ||||||    
T  19040247 tttatgtataagctatttctttagaaaaagataaaataaagtcaaaataatttcataaaagctataa 19040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 22684663 - 22684589
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| || || || |||||||| ||||| | || |||| | ||||||||||||||||| |||||||||||    
T  22684663 cttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataa 22684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 46013437 - 46013363
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46013437 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 46247151 - 46247225
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46247151 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 47119073 - 47119027
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||| ||||| ||||| ||||||||||| ||||||||||    
T  47119073 caaaagataaaacaaagttaaattgttttcatataagctataagttg 47119027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 53192454 - 53192416
Alignment:
Q  54 taaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||||||||||||||||||||||||| || |||||||||    
T  53192454 taaaataaagtcaaattattttcatagaatctataagtt 53192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 55437388 - 55437354
Alignment:
Q  53 ataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||||||||||||||||||||| ||||    
T  55437388 ataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 15511482 - 15511425
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaa-aagataaaataaagt 64  Q
    ||||||||  ||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  15511482 cttatcatgtaagtgcttatgtataagttatttttataacaagaagataaaataaagt 15511425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 15969833 - 15969886
Alignment:
Q  15 tacaagtgtttatgtataagttatttttgt-accaaaagataaaataaagtcaa 67  Q
    |||||||||||||||||||||||||||| | | | ||||||||| |||||||||    
T  15969833 tacaagtgtttatgtataagttatttttataaacgaaagataaagtaaagtcaa 15969886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 24091434 - 24091467
Alignment:
Q  56 aaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||||||||||||||||||| ||||||    
T  24091434 aaataaagtcaaattattttcatataagctataa 24091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 24160929 - 24160998
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||| | || |||| |||||||| |||| ||||||||||||| ||  ||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttg 24160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 24929416 - 24929501
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| || ||||| ||||| |  ||||| | || ||||||||||||||||||| || | |||||||| || ||||||||||    
T  24929416 cttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttg 24929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 25434567 - 25434522
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttg 25434522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 45128441 - 45128376
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||  ||||| | || ||||||||||||| || |||||||||| |||||||| ||||||    
T  45128441 ttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataa 45128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 49803151 - 49803208
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||| | || ||||||||||||| |||| ||||| |||||| ||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgttttcacataa 49803208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 50745939 - 50746008
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||| |||| ||||||| || |||||||||||||||| ||||| | |||| |||||| ||| ||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttg 50746008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 53626717 - 53626781
Alignment:
Q  28 gtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||| ||   |||||||||||||||| ||||| | ||||||||||| |||||||    
T  53626717 gtataagttatttttctataacaaaagataaaataaattcaaaatgttttcatataagctataag 53626781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 20936110 - 20936070
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||||||||||||| ||||||||| ||| ||||    
T  20936110 caaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 21193937 - 21193981
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||| ||||||| ||  |||||||||||||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 21952930 - 21952966
Alignment:
Q  54 taaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 27321978 - 27321946
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttattt 40  Q
    ||||||||| |||||||||||||||||||||||    
T  27321978 cttatcatataagtgtttatgtataagttattt 27321946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 27968072 - 27968120
Alignment:
Q  20 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    |||||||| || ||||||||||| || |||| |||||||||||||||||    
T  27968072 gtgtttatataaaagttatttttataacaaatgataaaataaagtcaaa 27968120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 29194524 - 29194476
Alignment:
Q  34 gttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||  |||||||||||||||| ||||| |||||||||||||    
T  29194524 gttattttcgtgacaaaagataaaataaaatcaaactattttcatataa 29194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 43372111 - 43372035
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||| |||||||||   ||||| ||||||| || |||||||||||||| ||||||| | |||| |||||| ||||||    
T  43372111 catataagtgtttaaacataaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 55870459 - 55870403
Alignment:
Q  37 atttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||| || |||||||| ||||||||||||| | |||||| |||| ||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttg 55870403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 41620437 - 41620365
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  41620437 ttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatata 41620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 4558731 - 4558803
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||| ||||| | ||  ||||||||||||||||| ||||||||||||||||  |||||||    
T  4558731 aagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataag 4558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 38561649 - 38561734
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||| ||| |||||| ||| |||||||||||| | || |||||||||||||||||||||| |||||| || ||  ||||||||||    
T  38561649 cttattatataagtgtctatatataagttatttatataacaaaagataaaataaagtcaaactatttttatctatactataagttg 38561734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 38874570 - 38874643
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||| || ||||||||||||||||||| ||| |||| | |||||||||||  ||||||||| |||||||||||    
T  38874570 ttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 38874643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 1470985 - 1470921
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||| ||||| | ||  |||||||||||||||||||||||| |||||||||| |||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataag 1470921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 40728565 - 40728505
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||| ||||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  40728565 cttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 11494076 - 11494155
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||| ||||| || |||||| ||||||||  || |||||||||| ||||||||||| | ||||||||||| ||||    
T  11494076 cttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcatataaactat 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 14482125 - 14482192
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||||||| ||||| ||||||||||  ||||| | || |||||||||||||||||||||||| ||||    
T  14482125 cttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 40357822 - 40357893
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||| |||| |||||||||||| | ||  | || |||||||||||||||||| ||||||||||||||    
T  40357822 cttatcatataagtatttatgtataagctcttgatataacaaaagataaaataaagtaaaattattttcata 40357893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 7026650 - 7026728
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||| |||||||| ||||| ||||| ||||| || | || || |||||||||||||||||| ||||| |||||||||||    
T  7026650 aacatttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataa 7026728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 26820142 - 26820204
Alignment:
Q  28 gtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||| | || |||||||||||||||||||||| ||||||  ||||| |||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataag 26820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 29056130 - 29056064
Alignment:
Q  16 acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||||| || || |  | ||||||||||||||||||||| || |||||||||||    
T  29056130 acaagtgtttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataa 29056064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 34770854 - 34770900
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34770854 caaaagataaaataaagtcaaattgttttcatttaagctataagttg 34770900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 2364619 - 2364558
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 70  Q
    |||||||| || | |||||||||| | ||||||| || ||||||||||||||||||||||||    
T  2364619 ttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaaatt 2364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 31884517 - 31884598
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||||  |||||||||||||||| | || ||||| ||||||| || |  |||| ||||||||||| ||||||    
T  31884517 cttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataa 31884598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 35298624 - 35298539
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc-atataacctataagttg 93  Q
    |||||||| ||||| ||||||||||| |||||  ||| ||||||||||||||||| ||||   ||||| |||||| ||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttg 35298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 42597340 - 42597409
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| |||||||  || ||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttg 42597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 12225030 - 12224974
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 80  Q
    ||||||||||||||||| |    |||||||||||||||||||||| |||||||||||    
T  12225030 ttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatat 12224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 14949806 - 14949882
Alignment:
Q  3 caacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||| |||||||||||||  ||||||||||| || || | || |||||||||||||| ||||||| | ||||||||    
T  14949806 caacatttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 29262979 - 29262947
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||||||||||||||    
T  29262979 aagataaaataaagtcaaattattttcatataa 29262947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 2100767 - 2100802
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||| |||||||||||||    
T  2100767 caaaagataaaataaagtcaaaatattttcatataa 2100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 29699178 - 29699237
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    |||||||| || || ||||||| ||||||||| | || ||||||||||||||||||||||    
T  29699178 ttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29973014 - 29973089
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||| |||| |||||| ||||| | || || ||| ||||||||||||||| |||||||| |||| ||||||||||    
T  29973014 aagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttg 29973089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 34563169 - 34563244
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||| |||||||| ||||| |||| |||||||||||| | |  |||| |||||||||||||||||  |||||||||    
T  34563169 aacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaacaattttcata 34563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 35869758 - 35869845
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  35869758 cacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 35869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 40280352 - 40280281
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||| |||||  ||| |||||||||||| |  | |||||||||||||||||| ||||| ||||||||    
T  40280352 cttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 42237539 - 42237488
Alignment:
Q  38 tttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 3537139 - 3537093
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||||||| ||||| ||||| ||||| ||||    
T  3537139 caaaagataaaataaagtcaaattgttttcgtataagctataggttg 3537093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 3945207 - 3945281
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||||||||| ||||||||||||   || |||||||||||||||| | ||  |||||| |||||| |||||||||    
T  3945207 aagtgtttatatataagttatttcaataacaaaagataaaataaaatgaagctatttttatataagctataagtt 3945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 12361131 - 12361197
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| |||||||||||| | ||   ||||||||||| |||||||||| ||||||||||| |||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataag 12361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 26215435 - 26215493
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||| ||||||| |||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 27728128 - 27728094
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||||||| |||||||||||||    
T  27728128 aaaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 31315598 - 31315533
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    |||||||| |||||||  |||||||| ||||||| ||  ||||||||||||||||||||| ||||||    
T  31315598 ttatcata-aagtgttagtgtataagctatttttataataaaagataaaataaagtcaaactatttt 31315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 41336776 - 41336718
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||| | |||||| |  |||||||||||||| ||||||||| |||||||||||    
T  41336776 ttatgtataaatcatttttatgacaaaagataaaatatagtcaaattgttttcatataa 41336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 1112785 - 1112858
Alignment:
Q  17 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||| ||||||||| | ||||| | || ||||||||||||||| || ||||| |||||| |||| |||||||    
T  1112785 caagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataag 1112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 10939328 - 10939385
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaag 63  Q
    ||||||| |||| | |||||||||||||||||||| | |  |||||||||||||||||    
T  10939328 cacttattatactactgtttatgtataagttatttctattacaaaagataaaataaag 10939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 11056814 - 11056729
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| ||||||| ||| || || ||||| | || ||||||  ||||||||||  || ||||||||||||| ||||||||||    
T  11056814 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttg 11056729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 31705025 - 31705090
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataag 90  Q
    ||||||||| ||||| ||||| |||||||||||| | |||||||||  |||||||||| |||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataag 31705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 33209366 - 33209285
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||| |||  ||||| ||||| | ||   ||||||||||||||||| || | ||||||||||| |||||||    
T  33209366 ttatcatacaagtgtctataaataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataag 33209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 34788574 - 34788493
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||| || || ||| ||||||| ||||||| |  | |||||||||||||||||||| | ||| ||||||| ||||||    
T  34788574 cttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 787252 - 787172
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||  ||||| |||||| |||| | |||  ||| || ||||||||||||||||||||| || |||||||| ||||||    
T  787252 ttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataa 787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 2699231 - 2699303
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| | |||| ||| |||||||||||| |  | ||||| |||||||||||| ||| |||||||||||||    
T  2699231 tatcatatacgtgtctatatataagttatttctacaacaaaatataaaataaagttaaactattttcatataa 2699303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 7878587 - 7878551
Alignment:
Q  54 taaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10062262 - 10062218
Alignment:
Q  20 gtgtttatgtataagttatttttgtaccaaaagataaaataaagt 64  Q
    ||||||||||||||||||||| | |||||||||| || |||||||    
T  10062262 gtgtttatgtataagttatttctataccaaaagaaaagataaagt 10062218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 11376670 - 11376714
Alignment:
Q  52 gataaaataaagtcaaattattttcatataacctataagttgctt 96  Q
    |||||||||||||| ||||||||| |||||| ||||||| |||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctt 11376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 11415075 - 11415151
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||||| |||||||||  |||  | || ||| || || ||||||||||||||||||| ||||||    
T  11415075 cacttatcatataagtgttcatgtataagccattgctttagcaagaggtagaataaagtcaaattatttttatataa 11415151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 35374479 - 35374439
Alignment:
Q  49 aaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  35374479 aaagataaaataaagttaaattgttttcatataagctataa 35374439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 39392808 - 39392748
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||| |||||  |||||||||  ||||| | || ||||||||||||||||||||||    
T  39392808 cttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaa 39392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 40356790 - 40356854
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||| ||||| ||||| |||| |||||| ||||| | ||  |||||||||||||||||||||    
T  40356790 aacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 40356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 37788786 - 37788868
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  37788786 tatcatacaagtgtttatgtataagttatttta-taacaaaagataaaataaagtccaattattttcgtataatctataagttg 37788868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 38462200 - 38462277
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    ||||||||||||| |||||||||| |||||| ||||| | ||||||||||||||||||||||||| | ||||||||||    
T  38462200 aacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 33307728 - 33307653
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||| ||||| ||||||||||| |||||  ||| ||||| || |||||||||||||||||||||||||||    
T  33307728 acttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataa 33307653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 49772818 - 49772747
Alignment:
Q  5 acacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    |||||||||||| ||||||||||||||||| ||||||||||  |||| ||||||||||||| |||| |||||    
T  49772818 acacttatcatataagtgtttatgtataagctatttttgtaataaaaaataaaataaagtctaattgttttc 49772747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||| ||||| | || |||||||||||||||||||||||||||||||||||| ||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 16790502 - 16790432
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||| ||||| ||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 29771751 - 29771817
Alignment:
Q  27 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||| | |||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  29771751 tgtataagttatttctataccaaaagacaaagtaaagtgaaattattttcatataaactataagttg 29771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 43116574 - 43116492
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 91  Q
    ||||||||||||||||||||| |||| ||||| | || ||||||||||||| || |||||  |||||||||||| ||||||||    
T  43116574 ttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagt 43116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 39971237 - 39971309
Alignment:
Q  3 caacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    |||||||||||||| ||||| |||||||||||||| || | || ||||||||||||||||| |||||| ||||    
T  39971237 caacacttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 3182509 - 3182438
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||  |||||||||||||||||||| || | ||  ||||||||||||||||||||||| ||||||||    
T  3182509 cttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcata 3182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 22214830 - 22214743
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||| || |||||  ||||||||| |||||| | || |||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  22214830 cacttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttg 22214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 44374791 - 44374720
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||| ||||| ||||||||||| ||| | | || |||||||||||||||||||||||| ||||||||    
T  44374791 cttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 48397587 - 48397654
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| |||| || ||| ||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttg 48397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 20349623 - 20349549
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| |||||||| |||||||| |||||  ||| |||| |||||||| ||||| ||||||||||||||||    
T  20349623 cttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtctaattattttcatataa 20349549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 32555089 - 32555043
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  32555089 caaaagataaaataaagtcaaattattttcctataagctataagttg 32555043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 36783472 - 36783402
Alignment:
Q  18 aagtgtttatgtataa-gttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  36783472 aagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactat 36783402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 3757981 - 3758042
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||| ||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||||    
T  3757981 aagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactcttttcata 3758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 4990691 - 4990630
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||| |||| |||| |||||||| |||||||| | |||||||||||    
T  4990691 tgtttatgtataagttatttctgtatcaaaggataaaatgaagtcaaacttttttcatataa 4990630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 20192743 - 20192671
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||| ||||||||||| ||||| | || ||||||||||||||||||||||   ||||||||||| |||||||    
T  20192743 aagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataag 20192671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 32703062 - 32703142
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||| || |||||||||||||| ||||| | |   ||||||||||||||| ||||||| ||||||||||| ||||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 37689509 - 37689450
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||| ||||||| || ||||||||||| |||||| ||||||||||||||||| ||||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataa 37689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 24235811 - 24235745
Alignment:
Q  27 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||| | || |||||||||| ||||||||||| |||||  |||||| ||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttg 24235745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 24605153 - 24605103
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  24605153 aagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaa 24605103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 78  Q
    |||||||||||||||||   || |||||||||||||||||||||||| |||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 23530335 - 23530246
Alignment:
Q  6 cacttatcatacaa-gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataagttg 93  Q
    ||||||||||| || ||| ||| ||| ||| || |||| || ||||||||||||||||||||||||| |||||||||||  |||||||||    
T  23530335 cacttatcatataaagtgcttacgtagaagctagttttctaacaaaagataaaataaagtcaaattatttttcatataaagtataagttg 23530246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 25195386 - 25195419
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatat 80  Q
    ||||||||||||||||||||||||||||||||||    
T  25195386 caaaagataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 27792796 - 27792869
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| ||||||||||| |||||    | ||||||||||||||| |||||| |||||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataa 27792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 28779279 - 28779364
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| || || || |||||||| | ||||| || ||  |||| ||||||||||||| ||||||||||||| ||||||||||    
T  28779279 cttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataagttg 28779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 53736251 - 53736186
Alignment:
Q  17 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||| ||| |||| |||||||| | || ||||||||||||||| |||||| |||||||||||||    
T  53736251 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 53736186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 54775052 - 54775125
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  54775052 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 2865765 - 2865721
Alignment:
Q  49 aaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  2865765 aaagttaaaacaaagtcaaattgttttcatataacctataagttg 2865721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8142847 - 8142803
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  8142847 aagtgtttatgtataagctatttttatatcaaaagataaaataaa 8142803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 10101601 - 10101549
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 10212526 - 10212474
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10212474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 30669104 - 30669036
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||| ||||||| || ||||||||||||||| ||  |||| ||||| ||||| ||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataatgttgaatttttttcttataaactataa 30669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 36646527 - 36646455
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||| || |||||| ||||| | |  ||||||||||||||||||  |||| |||||||||||    
T  36646527 tatcatacaagtgttgatatataagctatttctatgacaaaagataaaataaagtataattgttttcatataa 36646455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 21574425 - 21574495
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||| |||| ||||| ||| | ||||||||||||||| ||||| ||| ||||||| ||||||    
T  21574425 aagtgtttatgtatgagttgtttttatac-acaagataaaataaagttaaattgtttacatataagctataa 21574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 32064359 - 32064430
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    |||||||||||||  |||| | ||||||||||| ||| |  | ||||| |||||||||||||||||||||||    
T  32064359 aacacttatcatattagtgctaatgtataagttctttctaaaacaaaaaataaaataaagtcaaattatttt 32064430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 32663566 - 32663636
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 80  Q
    ||||||||||| |||||||| ||||||||||| | || |||||||| |||||| ||||||  ||||||||||    
T  32663566 ttatcatacaattgtttatgcataagttatttctataacaaaagat-aaataaggtcaaacaattttcatat 32663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 36283703 - 36283659
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  36283703 gtttatgtataagttatttttgta--acaagataaaataaagtcaaa 36283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 41028998 - 41028939
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 67  Q
    ||||||||| ||||| ||||||||||| ||||| | || ||||||| |||||||||||||    
T  41028998 cttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 22232749 - 22232823
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| || || | ||||||||| ||||| | || |||| ||||||||||||||||| | |||||||||||    
T  22232749 cttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataa 22232823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 25129752 - 25129833
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 88  Q
    |||||| ||||||| || |||||||||| |||||  | |||||||||||| |||||||||||| |  |||||||||| |||||    
T  25129752 cacttaccatacaa-tgcttatgtataacttattcctataccaaaagatacaataaagtcaaactgctttcatataatctata 25129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 25183139 - 25183053
Alignment:
Q  5 acacttatcatacaagtgttta-tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| ||||||| ||||||||| |||||||  ||||||| || |||||||| ||||||||| ||  ||||||||||| | |||||||    
T  25183139 acacatatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataag 25183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 26990696 - 26990730
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatata 81  Q
    |||||||||||||||||||||||| ||||||||||    
T  26990696 caaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||| ||||| | || |||||||||||||||||||||| | ||||||||||| ||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 53457301 - 53457371
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||  ||||||||| ||||||| || ||   || |||||||||||||||||||||| ||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 2128384 - 2128331
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||||||||||| ||||| | || |||||||||||||||||| ||||| ||||    
T  2128384 gtttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 3467491 - 3467450
Alignment:
Q  52 gataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||| ||||||||||  ||||||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttg 3467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 16790234 - 16790181
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    |||||||| ||||| |||| |||||||||||| | || ||||||||||||||||    
T  16790234 ttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 24268301 - 24268228
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatata 81  Q
    |||||||||||||| ||||||||||  ||||| | || |||||| |||||| |||||||| || ||||||||||    
T  24268301 ttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaaactttttttcatata 24268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 26599140 - 26599185
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||    
T  26599140 caaaagataaaataaagtcaaatagttttcatataaggtataagtt 26599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 33882969 - 33883018
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    |||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 36101491 - 36101576
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||| | ||||| ||||| ||||| ||||| ||||  | ||||||||||||||||||| |  |||| ||||| ||||||||||    
T  36101491 cttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttg 36101576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 40122883 - 40122815
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| |||||   || |||||||||||||||||||||| | |||||||| || ||||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttg 40122815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 49546624 - 49546575
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 67  Q
    ||||| |||||| |||| ||||||| || |||||||||||||||||||||    
T  49546624 aagtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 52413258 - 52413197
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||| ||||||||||| ||||||| || ||||||||| |||||| | ||| ||||||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaaatgaaactattttcata 52413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 905115 - 905043
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| ||| | ||| ||||||| ||||| | || ||||||||||||||||||||| || ||| |||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataa 905043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 8007837 - 8007761
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||| | ||||||||||| | ||| | || ||||||||||| |||||||||| | || |||||||| ||||||    
T  8007837 catacaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 10357378 - 10357430
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| | || ||||||||||||||| || ||||| |||||||||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataa 10357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||| ||||| | || |||||||||||||||||| ||||| |||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 23315591 - 23315631
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataag 23315631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 42039092 - 42039140
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 66  Q
    ||||| ||||||||||| ||||| |||| ||||| ||||||||||||||    
T  42039092 aagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtca 42039140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 42809242 - 42809298
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| ||||| | || |||||||||||||| ||| ||||| |||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataa 42809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 35135809 - 35135725
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||| |||| ||||||||||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||| |||||||||    
T  35135809 cttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 36539668 - 36539754
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||| ||||| |||||| |||| ||||| | || |||||||||||||||||||||  | ||||||||||| ||||||||||    
T  36539668 acttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttg 36539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 7096271 - 7096203
Alignment:
Q  11 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||  |||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 9927518 - 9927593
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||||||| | ||  |||||||||||| | |||||||| ||||||||||| | ||||||||    
T  9927518 aagtgtttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttg 9927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 32059736 - 32059654
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||| ||||| ||||||||||| | |||||||| | || ||||||||||||||||| | ||||||||||| |||||||    
T  32059736 acttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataag 32059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 4991089 - 4991016
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| |||||||| |||||||| ||||||| || |||||||||| ||||  |||| ||||||||||||||    
T  4991089 ttatcatataagtgtttgtgtataagctatttttataacaaaagataacataagatcaatttattttcatataa 4991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 38047986 - 38047929
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    ||||||||||| ||| | | || |||||||||||||||||||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 9202885 - 9202821
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||| |||| |||||| ||||| |||| |||||||||||||||||| ||||| |||||||||||    
T  9202885 aagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataa 9202821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 5284809 - 5284762
Alignment:
Q  20 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 67  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  5284809 gtgtttatgtatatgctatttttgtaacaaaagataaaataaagtcaa 5284762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 34117669 - 34117595
Alignment:
Q  19 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 96  Q
    |||| ||||||||||||||||| | || ||||||||||||||| ||   ||||||| ||||||| |||||||||||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataaggt---attatttacatataagctataagttgctt 34117595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 912796 - 912710
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc-aaattattttcatataacctataagttg 93  Q
    ||||||||| ||| ||||||| ||||||||||| | || || || ||||||||||||| ||||| ||||||||||| | ||||||||    
T  912796 cttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttg 912710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 18704179 - 18704098
Alignment:
Q  11 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||| ||||  ||||||||||||||||| | || |||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttg 18704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 37063205 - 37063147
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||  ||||| | || |||||||||||||||||||||| |||||||||||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataa 37063147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 42181211 - 42181145
Alignment:
Q  36 tatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    ||||||| || |||||||||||| ||||||||||  ||||||||||| |||||||||| || |||||    
T  42181211 tatttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaa 42181145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 6734038 - 6733966
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||||||||| ||||  ||||||| || | |||||||||||||||| ||||| |||||||||||    
T  6734038 ttatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt-aaattgttttcatataa 6733966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 10391272 - 10391329
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataa 61  Q
    ||||||||||||| ||||| ||| ||||||| ||||||| || |||||||||||||||    
T  10391272 aacacttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 36796836 - 36796771
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||| || | ||||| ||||||||| || |||||||||||| |||| |||||||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataag 36796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 10907312 - 10907384
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||||||||| | || | || | ||||||||| ||||| || |||||||||| |||||||    
T  10907312 aagtgtttatgtataagttatttctatagctaatggtaaaataaaatcaaactactttcatataatctataag 10907384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 12407807 - 12407752
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 64  Q
    ||||||||||||||||| ||||||||| ||||| | || ||||||||||||||||||    
T  12407807 cttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 32969225 - 32969185
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  32969225 caaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 35960338 - 35960421
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||| |||| |||||| ||||  ||||| | ||  ||||||||||||||||||||| || |||||||||| ||||||||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaaacta-tttcatataaactataagttg 35960421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 1636891 - 1636844
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    |||||||| ||||||||||| |||| || |||||||||||||||||||    
T  1636891 tgtttatgaataagttatttctgtatcacaagataaaataaagtcaaa 1636844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 8158409 - 8158374
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||| |||||||||||||||||    
T  8158409 caaaagataaaataaagttaaattattttcatataa 8158374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 9703365 - 9703302
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| |||| ||| |||||||||||||||||| |  |||||||||| ||| ||||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttg 9703302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 10303763 - 10303802
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataaccta 86  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10303763 caaaagataaaataaagtcaaattgttttcatttaaccta 10303802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 14295468 - 14295511
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||||||||| | ||||||||||| |||||||    
T  14295468 caaaagataaaataaagtcaaactgttttcatataagctataag 14295511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 17756875 - 17756808
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    |||||||| ||||| |||||||| |||| ||| | || || ||||||||||||||||||||| |||||    
T  17756875 ttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 20982282 - 20982223
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 67  Q
    ||||||||| ||||| ||||||||||| ||||| | || |||| ||||||||||||||||    
T  20982282 cttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 29117061 - 29116998
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||| ||||||| | || |||||||||||||||||||||| | ||||| ||||| ||||    
T  29117061 ttatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 35550911 - 35550953
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  35550911 caaaagataaaataaagtc-aattattttcatataaactataag 35550953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 39750105 - 39750140
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||| |||||||||||||    
T  39750105 caaaagataaaataaagtcaaactattttcatataa 39750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 3952061 - 3952104
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  3952061 aaaagataaaataaagacaaatt--tttcatataacctataagttg 3952104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 6738558 - 6738484
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 78  Q
    ||||||||||||| ||||  ||||||||||| |||||   ||  |||||| |||||||||||||||| |||||||    
T  6738558 aacacttatcatataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaaattcttttcat 6738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 11835210 - 11835268
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    ||||||||||||||||   |||||| || |||||||||||||||||| ||||| |||||    
T  11835210 aagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 13224348 - 13224406
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    |||| |||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||    
T  13224348 aacagttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 32172576 - 32172658
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||| | ||||||||||  ||||| |  | ||||||||||||| ||||||| || ||| ||||||| |||||||    
T  32172576 cttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataag 32172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 39823229 - 39823183
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||||| || |||||||||| ||| ||||||    
T  39823229 caaaagataaaataaagtcaaactactttcatataagctacaagttg 39823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 40048417 - 40048359
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    ||||| ||||||||||||| ||| | || |||||||||||||||||| | |||||||||    
T  40048417 aagtgcttatgtataagttgtttctataacaaaagataaaataaagttatattattttc 40048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 4855637 - 4855706
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||| || ||||||| || ||||| |||||||||||| ||||| || ||||||||  |||||||||    
T  4855637 ttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttg 4855706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 10272538 - 10272493
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||| |||||||||| ||||| ||||| ||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttg 10272493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 11615452 - 11615493
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaatt 70  Q
    |||||| ||||||| || ||||||||||||||||||||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaatt 11615493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14932223 - 14932280
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||||| ||||||||  ||||||| || |||||||||||||||||| ||||| ||||    
T  14932223 aagtgttcatgtataatctatttttatagcaaaagataaaataaagttaaattgtttt 14932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 34205206 - 34205247
Alignment:
Q  52 gataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||| ||||||||||||||||| |||||| ||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttg 34205247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 38033891 - 38033940
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaa 57  Q
    ||||||| | ||||||||||||||||||||||| | || |||||||||||    
T  38033891 cttatcaaataagtgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 39128578 - 39128643
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||| || || | || |||||||||||||||||||||||| || ||| |||| ||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataa 39128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 12595848 - 12595808
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  12595848 caaaagataaaataaagttaaattgttttcatataaactat 12595808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17498668 - 17498712
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  17498668 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 17498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 19177403 - 19177487
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||| ||||| ||||||||||  ||||| |  | || |||||||||| ||||| || | ||||||||||| ||||||||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttg 19177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 21782706 - 21782654
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 70  Q
    |||||||||||| |||| ||||| | || |||||| |||||||||||||||||    
T  21782706 aagtgtttatgtttaagctatttctataacaaaagctaaaataaagtcaaatt 21782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 28586911 - 28586839
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| | ||| |||||||||   ||||| | || |||||||||||||||||||||| | |||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 4200150 - 4200232
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 88  Q
    ||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || ||||||||||| |||||    
T  4200150 cacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 15360826 - 15360902
Alignment:
Q  17 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||| |||||||| | || |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  15360826 caagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttg 15360902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 28467457 - 28467369
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||| ||| ||||||||||  ||||| ||||   |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28467457 acttatcatacaggtgattatgtataacctatttgtgtataacaaaagataaaataaagtcaaattattttcatataagctacaagttg 28467369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 45990205 - 45990122
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 91  Q
    |||||||||||| || | ||||||| | ||||||| || |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  45990205 cttatcatacaaatgctaatgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 49517006 - 49517075
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||| |||||||||||||| | || |||||||||||||||||||||||| ||||||| ||| |||||||    
T  49517006 tgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataag 49517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 44032145 - 44032065
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||| |||||||||||||||||   ||| | || |||||| ||||||||||||||||| ||||||||||| ||||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 48830210 - 48830142
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||||||||| | |  | |||||||||||||||||||| ||||||||||||| ||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 7274086 - 7274015
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||| || || ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||    
T  7274086 cttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 870968 - 871042
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| ||||| ||||||||||  ||||||| || ||||||||||||| ||||||| || |||||||||||    
T  870968 cttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataa 871042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 289168 - 289225
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 70  Q
    |||| ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  289168 catataagtgcttaagtataagctatttttgtagcaaaagataaaataaagtcaaatt 289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 17269177 - 17269258
Alignment:
Q  12 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||| ||||| ||||||||||||||||| |  | ||||||  |||||||||||||||| ||||||||||| | ||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttg 17269258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 29007847 - 29007778
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||| |||||||||| | || ||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttg 29007778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 29794057 - 29793991
Alignment:
Q  20 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||| |||||| |||| ||||    
T  29794057 gtgtttatgtataggctatttttgtaacaaaagataaaat-aagtcaaattgttttcaaataagctat 29793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 49557062 - 49557149
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||| ||||  | ||||| ||| ||||||||||    
T  49557062 cacttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttg 49557149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 27738288 - 27738246
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataagctataa 27738246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 30371110 - 30371156
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  30371110 caaaagataaaataaactcaaattgttttcatataagctataagttg 30371156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 33339566 - 33339500
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    |||||||| | ||||||||||||||| ||||| | |||||||||||||||| |||| ||| ||||||    
T  33339566 ttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagttaaactatttt 33339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 4256177 - 4256108
Alignment:
Q  20 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||||||| ||||| |  | ||||||||| |||||||| ||||||||||| ||||| ||||||    
T  4256177 gtgtttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 7218181 - 7218136
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  7218181 aaaaggtaaaataaagtcaaattgttttcatataagctataagttg 7218136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 44936713 - 44936656
Alignment:
Q  32 aagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||| | || |||||||||| ||||||||||| ||||||||||||| ||||||    
T  44936713 aagttatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 46980275 - 46980202
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| |||||  |||| ||||||| ||||| || ||||||||||||||||| |||| | |||||||||||    
T  46980275 ttatcatataagtgcatatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataa 46980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 1233029 - 1232965
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| | ||||| || ||||| |||||||||||| ||||||||||| |||||    
T  1233029 aagtgtttatgcataagctgtttttataacaaaacataaaataaagttaaattattttcgtataa 1232965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 1730825 - 1730881
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 74  Q
    ||||| ||||||||||| ||||||| || | |||||||||||||||||||| |||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaactattt 1730881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 10439648 - 10439688
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctat 87  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  10439648 caaaagataaaatgaagtcaaattattttcatataagctat 10439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 11560686 - 11560622
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| ||||||| ||||||| || ||||||||||||| || ||||||| |||| ||||||    
T  11560686 aagtgtttaggtataagctatttttatagcaaaagataaaatcaaatcaaattgtttttatataa 11560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  31 taagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 15361678 - 15361718
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  15361678 aagataaagtaaagtcaaattattttcatataagctataag 15361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 16982083 - 16982027
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 64  Q
    ||||||||| |||||||||||||||| ||||||   || ||||||||||||||||||    
T  16982083 cttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 29723454 - 29723506
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||| |||||    
T  29723454 aagataaaataaactcaaactattttcatatatgctataagttgctttcacaa 29723506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 36641814 - 36641862
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattat 72  Q
    |||| |||||||||||| | || ||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaagtcaaattat 36641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 50998491 - 50998555
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 88  Q
    ||||||||||| ||||| |||| |||||||||||| ||| ||||| || |||||||||| |||||    
T  50998491 ttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 4215311 - 4215374
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||| |||||||||||||  || |||| ||||||||||||||||| | ||||||||||| ||||    
T  4215311 ttatatataagttattttgatagcaaatgataaaataaagtcaaactgttttcatataaactat 4215374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 9656612 - 9656655
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||    
T  9656612 caaaaaataaaataaagttaaattattttcatataagctataag 9656655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 25006135 - 25006096
Alignment:
Q  54 taaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttg 25006096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 36151637 - 36151578
Alignment:
Q  23 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||| |||||   || |||||||||||||||||||||||| ||||| |||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataa 36151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 42336596 - 42336659
Alignment:
Q  19 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||| ||||||||| ||||||||| || ||||| |||||||||||||||   ||||||||||||    
T  42336596 agtgcttatgtataggttatttttataacaaaaaataaaataaagtcaagcaattttcatataa 42336659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 79
Target Start/End: Original strand, 45234160 - 45234191
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||||||||||||||||||||||||||    
T  45234160 aaaagataaaataaagtcaaattattttcata 45234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 47877084 - 47877127
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||    
T  47877084 caaaagataaaataaaatcaaattgttttcatataaactataag 47877127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 50319231 - 50319286
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||||| ||||| | || ||||||||||||||||||||| || ||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 5422028 - 5421982
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  5422028 caaaagataaaatatagtcaaattgttttcttataagctataagttg 5421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 5592792 - 5592747
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttg 5592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 6933090 - 6933037
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||||  |||||| || ||||| |||||||||||||||||| ||||||||    
T  6933090 atgtataagccatttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 11211062 - 11211115
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||| |  | |||||||||||||||||| ||||| |||||||||||    
T  11211062 tataagttatttctagaacaaaagataaaataaagttaaatttttttcatataa 11211115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 11218228 - 11218175
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    |||||||| ||||||||||||||||||||||| | |  |||||||| |||||||    
T  11218228 ttatcatataagtgtttatgtataagttatttatatgtcaaaagattaaataaa 11218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 17420142 - 17420207
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||  ||||||| ||  |||||||||||||||||| ||  |||||||||||| ||||||    
T  17420142 ttatgtataaactatttttataagaaaagataaaataaagtcgaacaattttcatataagctataa 17420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 23895259 - 23895332
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    ||||||||| ||||  ||||||||||| ||||| | || |||||||||||||||| ||||| | || |||||||    
T  23895259 cttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 30259637 - 30259552
Alignment:
Q  5 acacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||| ||||| ||||| | ||| ||||| | || ||||| |||||||||||||||| |  ||| |||||| |||||||    
T  30259637 acacttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataag 30259552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 36602714 - 36602783
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 78  Q
    |||||||| ||||| ||||||||||| ||| | |  | ||| ||||||||||||||||||| ||||||||    
T  36602714 ttatcatataagtgattatgtataagctatatctacaacaatagataaaataaagtcaaatcattttcat 36602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 43372090 - 43372025
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||| | ||||| | || ||| |||||||||| |||||||||||||||| |||| ||||||    
T  43372090 ttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 45205031 - 45205076
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||||| ||||| ||||||| ||| ||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttg 45205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 52286601 - 52286682
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||| ||| | ||||| ||||| ||||| |  | |||||||||||||||||| |||  |||||||||||| ||||||    
T  52286601 cttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 10854656 - 10854716
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||| ||||| ||||| ||||||||||| || |  | |||||||||||||||||||    
T  10854656 cttatcatataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaa 10854716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 27140418 - 27140482
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||| |||||||||| | || |||||||||||||||  | ||||| |||| ||||||    
T  27140418 aagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataa 27140482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 37818397 - 37818465
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataaccta 86  Q
    ||||| ||||||||||||||||| | || ||| ||||||||  |||||||| ||||||| |||| ||||    
T  37818397 aagtgcttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtatatccta 37818465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 38867959 - 38867907
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    |||||| ||||| | ||||||||||| ||||||||||||| | ||||||||||    
T  38867959 tataagctatttctataccaaaagattaaataaagtcaaaatgttttcatata 38867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 41516188 - 41516148
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  41516188 caaaagataaaagaaagtcaaactattttcatataagctat 41516148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 41638459 - 41638399
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 66  Q
    ||||||||||| ||||| |||||||||| |||||| |  | || |||||||||||||||||    
T  41638459 cacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 45107548 - 45107619
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| ||||| |||| |||||| ||||| | ||  |||| |||||||||||||||| |||||||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataa 45107619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 46500002 - 46499934
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    ||||| |||| ||||| |||| |||||| ||||| | ||  ||||||||||||||||||||||| ||||    
T  46500002 acttaacatataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 52559957 - 52559901
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| |||| | | || ||||| |||||||||||||||||||||||| |||||    
T  52559957 atgtataaattatatctataacaaaatataaaataaagtcaaattattttcgtataa 52559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 27499 - 27584
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||  ||||| ||||||||||||||||| | || || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  27499 cttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttg 27584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 21409 - 21351
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||||| ||  ||||||||||||||||| ||||| ||||| |||||    
T  21409 ttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataa 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 8680929 - 8680986
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8680929 gtttatgtataagttatttttgtaacaaaagatataataaagtcaaattattttcata 8680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 49060463 - 49060547
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||| |||| |||||||||||| ||||| | || ||||| ||||||||||||||||||||||| |||||| |||||||||    
T  49060463 cttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagtt 49060547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 9527241 - 9527152
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||||| |||| |||| | ||| | | || ||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  9527241 aacacttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttg 9527152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 45813311 - 45813242
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| |||||| ||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttg 45813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 30751441 - 30751513
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    |||||||| ||||| || || ||||  |||||||||| ||||| |||||||||||||||||||||||||||||    
T  30751441 ttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcatata 30751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 1417201 - 1417272
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||  ||||| | || |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttg 1417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 30496637 - 30496712
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||  ||||| | || ||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  30496637 aagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttg 30496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 23918891 - 23918961
Alignment:
Q  19 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||| |||||||| | | |  |||||||||||||||||||||||| ||||||||||| ||||||    
T  23918891 agtgtttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 39505890 - 39505940
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  39505890 aagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaa 39505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 5010619 - 5010530
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||||||||||   ||||||  ||||||||| |||| ||||| |||||||||||| |||||||||| ||||||  |||||||||    
T  5010619 aacatttatcatacaagaagttatgtgcaagttatttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttg 5010530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 39591593 - 39591540
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||| | || |||||||||||||||||||||||| |||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataa 39591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 44241783 - 44241867
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||| |||||| |||||||||||||||| | || ||| ||||||||||||||  || ||||||  ||||||||||||||||    
T  44241783 cttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaagt-taactatttttgtataacctataagttg 44241867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 45593865 - 45593792
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| || || ||||||||||| ||||| |||| ||||| |||||||||||||||| | |||||||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataa 45593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 30133982 - 30134046
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||||||| || ||||| |||||    
T  30133982 aagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataa 30134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 28165024 - 28165095
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||| ||||||||||||| ||| | || ||||||||||||| |||||||||| |||| |||||| ||||||    
T  28165024 aagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataa 28165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 31002723 - 31002766
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  31002723 caaaagataaaataaagtcaaaatattttcatataagctataag 31002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 40689094 - 40689051
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  40689094 caaaagataaaataaagttaaattattttcatataagctataag 40689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5939017 - 5939067
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||||||    
T  5939017 aagtgtttatgtataagttatttttataacaaaaaattaaataaagtcaaa 5939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7244626 - 7244696
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||| ||||| ||||||||||| ||||| | || |||||||||||| ||||||||| | ||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 7453544 - 7453462
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatataacctataag 90  Q
    |||||||| ||| ||| ||||||||| | ||| | || |||||||||||||||||||||| || ||||||||||| |||||||    
T  7453544 ttatcataaaagggttcatgtataagatttttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataag 7453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 35536046 - 35536104
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| | || || ||||||||||||||||||||| |||||||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataa 35536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 991994 - 992067
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| ||| ||||||||| ||| | || ||||| ||||||||||| |||| |||||||||||||    
T  991994 ttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataa 992067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 3501097 - 3501028
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| || || | ||  |||||||||||||||||||||| ||||||||||||  |||||||||    
T  3501097 ttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttg 3501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 22759110 - 22759183
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||| |||||||| |||| ||||| | || |||||||||||||||||  ||||| |||||||||||    
T  22759110 ttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataa 22759183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 47004011 - 47004092
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||| |||||||||| | |||| ||||| | || ||| |||||||||||||||||| |||||| |||| | |||||||    
T  47004011 ttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataag 47004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 1432098 - 1432032
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaat---aaagtcaaattattttcatataacctat 87  Q
    ||||||||||||||||| | || |||||||||||||   ||||| ||||||||||||||||| ||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctat 1432032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 2223071 - 2223143
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 80  Q
    |||||| || ||||||||||||||||| ||||| | || |||||||||||  ||||||||||| |||| ||||    
T  2223071 cttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 25511550 - 25511634
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||| |||||||  ||||||| |||||| | || |||||||| |||||||||||| || |||| ||||||  ||||||||    
T  25511550 cttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaatttttttttatataagatataagtt 25511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 30456558 - 30456514
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagt 91  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  30456558 caaaagataaaataaagtcaaattgttttcatataagttataagt 30456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 41875864 - 41875908
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattt 74  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||    
T  41875864 ataagttatttctgtactaaaagataaaataaggtcaaattattt 41875908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 48157253 - 48157173
Alignment:
Q  22 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    |||||||||||| |||||| | ||  ||||||||||||||||| ||||| |||| |||||| |||||| ||| || |||||    
T  48157253 gtttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaa 48157173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 12835045 - 12835002
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  12835045 caaaagataaaataaagtcaaattgttttcatattagctataag 12835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 22296333 - 22296294
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  22296333 aagataaaataaagttaaattattttcctataacctataa 22296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 24895330 - 24895373
Alignment:
Q  59 taaagtcaaattattttcatataacctataagttgcttacacaa 102  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  24895330 taaagtcaaattattttcatataagctataagttgttttcacaa 24895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 27481440 - 27481357
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||| ||| ||||||||||||||||| ||||| | || |||| |||||||  |||||||| | ||| ||||||| |||||||||    
T  27481440 ttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 5272959 - 5272893
Alignment:
Q  16 acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||| |||||||||||||  ||||| | || ||||||||||||| |||||| ||| |||||||||||    
T  5272959 acaactgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataa 5272893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5276157 - 5276207
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||| ||||||||||| ||||||| || |||||||||| |||||||||||    
T  5276157 aagtgcttatgtataagctatttttataacaaaagataacataaagtcaaa 5276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 24909638 - 24909672
Alignment:
Q  59 taaagtcaaattattttcatataacctataagttg 93  Q
    |||||||||||||||||||||||| ||||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttg 24909672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 24973870 - 24973940
Alignment:
Q  11 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    |||||| ||||| ||||||| ||| ||||| | || |||||||||||||||| ||||||| ||| ||||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatata 24973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 27121717 - 27121659
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| | ||  ||| ||||||||||||||||||| |||||||||||    
T  27121717 ttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataa 27121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 27548182 - 27548268
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| ||||| || ||||| |||| |||||| |||||   || ||||||||||||||||||| |||| ||||||| ||| |||||||    
T  27548182 aacatttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataag 27548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 31149586 - 31149640
Alignment:
Q  24 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 77  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31149586 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 31167878 - 31167932
Alignment:
Q  24 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 77  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31167878 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 35809041 - 35808991
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||||||||| ||||| | || |||||||||||||| |||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaa 35808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 36532289 - 36532343
Alignment:
Q  23 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 77  Q
    ||||||||||||||||   | || |||||||||||| ||||||||||||||||||    
T  36532289 tttatgtataagttatccctataacaaaagataaaacaaagtcaaattattttca 36532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 38496659 - 38496583
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 88  Q
    ||||||||||||| |||  ||||||||| |||| || ||||| |||||||||| ||||| | |||||||||||||||||    
T  38496659 tatcatacaagtgcttacatataagtta-ttttataacaaaacataaaataaa-tcaaactgttttcatataacctata 38496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 45777279 - 45777233
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  45777279 caaaagataaaattaagtcaaactgttttcatataaactataagttg 45777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 46825061 - 46825095
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||||||||| |||||||||||    
T  46825061 aaaagataaaataaagtcaaattgttttcatataa 46825095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 1431455 - 1431394
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 69  Q
    ||||||||| |||||||||||||||||||||||   ||   ||| |||||||||||||||||    
T  1431455 cttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaaat 1431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 3610891 - 3610802
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||| ||||| ||||| ||||||||||| ||||| |  | ||||||||||||| ||| |||| | ||||  ||||| ||||||||||    
T  3610891 aacacttgtcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttg 3610802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 76
Target Start/End: Original strand, 3635927 - 3635956
Alignment:
Q  47 caaaagataaaataaagtcaaattattttc 76  Q
    ||||||||||||||||||||||||||||||    
T  3635927 caaaagataaaataaagtcaaattattttc 3635956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 5006639 - 5006582
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||| ||||  | || |||||||||||||||||||||| | |||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataa 5006582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 5373148 - 5373233
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||  ||||| ||||||||| | ||||| | || ||||||||||||||||||| ||  ||||| ||||||  |||||||||    
T  5373148 cttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttg 5373233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 7623078 - 7623135
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||| || |||||| |||||||||||| || | |||| ||||||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataa 7623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 8445210 - 8445275
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 74  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  8445210 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 8445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 27626258 - 27626197
Alignment:
Q  21 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||| ||||| | || |||||| ||||||||||||||| |||| | ||||||    
T  27626258 tgtttatgtataagctatttctatatcaaaagctaaaataaagtcaaactattattatataa 27626197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 28178910 - 28178963
Alignment:
Q  26 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||| ||||| | || |||||||||||||||||||| ||| ||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 28440438 - 28440527
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||| |||||| ||| | ||| | ||||| |||||  ||| |||||||||||||||||||||||  ||||| ||||| ||| ||||||    
T  28440438 aacactaatcatataagcgattaagaataagctatttcagtaacaaaagataaaataaagtcaaatggttttcgtataatctaaaagttg 28440527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 28613665 - 28613596
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||| ||||||| || |||||||||||| ||||| ||||| ||||  |||||  |||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttg 28613596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 39551695 - 39551614
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||| |||| |||| ||||||| ||||| | || ||||||||| | |||||| ||| | ||||||||||| ||||||    
T  39551695 cttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 40428518 - 40428559
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  40428518 aaaaaataaaataaagttaaattattttcatataagctataa 40428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1373670 - 1373614
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 81  Q
    |||||| ||||||||||| |  ||||||||||| |||||||||| | ||||||||||    
T  1373670 tatgtaaaagttatttttatgacaaaagataaattaaagtcaaacttttttcatata 1373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 5269463 - 5269519
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 74  Q
    ||||| |||| ||||| |||||| | ||  |||||||||||||||||||||||||||    
T  5269463 aagtgcttatatataaattatttctttaataaaagataaaataaagtcaaattattt 5269519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 14823982 - 14823938
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  14823982 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 14823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 15270989 - 15270945
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 62  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  15270989 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 15270945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 20476651 - 20476595
Alignment:
Q  14 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 70  Q
    |||||||||| |||| ||||||||||| | |  |||||||||||||||| |||||||    
T  20476651 atacaagtgtgtatgcataagttatttctattgcaaaagataaaataaattcaaatt 20476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 25507284 - 25507320
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagat 54  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25507284 aagtgtttatgtataagttatttctataccaaaagat 25507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25558326 - 25558290
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagat 54  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558326 aagtgtttatgtataagttatttctataccaaaagat 25558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25558524 - 25558488
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagat 54  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558524 aagtgtttatgtataagttatttctataccaaaagat 25558488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 31341133 - 31341177
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||||| ||||| | || ||||||||||||||||||||||    
T  31341133 ttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 33894556 - 33894619
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| | |||||||||||    
T  33894556 aagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataa 33894619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 38010659 - 38010719
Alignment:
Q  30 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  38010659 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 38010719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 39908099 - 39908059
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  39908099 aagataaaataaagtcaaataattatcatataagctataag 39908059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 47528084 - 47528048
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttattt 40  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  47528084 aacacttattatacaagtgtttatgtataagctattt 47528048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 3217336 - 3217263
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| ||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||    
T  3217336 ttatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataa 3217263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24836336 - 24836262
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  24836336 aagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 29274376 - 29274295
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||| || || ||||||||||| ||||| | || |||||||||||||||||||||||| ||||||||||| ||||||    
T  29274376 cttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 2027530 - 2027471
Alignment:
Q  31 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataag 2027471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 32975905 - 32975961
Alignment:
Q  12 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  32975905 tcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaa 32975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 10452505 - 10452422
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||||||  |||| ||||||||||| ||||| | || ||||| |||||||||| ||||| ||||||||||||| ||||||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttg 10452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 8349813 - 8349737
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| |||||||| |||||||  ||||| | || |||||||||||||||||| ||||| |||| ||||||    
T  8349813 cacttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatataa 8349737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 27595674 - 27595630
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  27595674 aaaagataaaataaagtcaaattattttcatataagctgtaagtt 27595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 4006647 - 4006722
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||| ||||| ||||| ||||| | || |||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  4006647 aagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttg 4006722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 10032493 - 10032576
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||| || |||||||||||||| ||||||| || ||| || | |||||||| |||| || |||||||||| |||||||    
T  10032493 acttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataag 10032576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 7785866 - 7785808
Alignment:
Q  31 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||| || | ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  7785866 taagttacttatataccaaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 22742305 - 22742371
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||| |||||| ||||| | || |||| ||||||||||||||||||| ||||||||||| |||||||    
T  22742305 ttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 28660238 - 28660160
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttcatata 81  Q
    ||||||||||||| |||||||||| ||||| |||||||| |   |||||||||||| ||||||||||| |||| |||||    
T  28660238 aacacttatcatataagtgtttatatataaattatttttatgataaaagataaaataaaagtcaaattgttttgatata 28660160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 1497899 - 1497976
Alignment:
Q  4 aacacttatcatacaagtgtttatgtataagttatttttgta-ccaaaagataaaataaagtcaaattattttcatat 80  Q
    ||||||||||||  ||||| |||||| |||| ||||||| || ||||||| ||||||||||||||| | |||||||||    
T  1497899 aacacttatcatttaagtgcttatgtttaagctatttttttaaccaaaaggtaaaataaagtcaaactgttttcatat 1497976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 5328898 - 5328971
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  5328898 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 28531688 - 28531627
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 69  Q
    ||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||||||||    
T  28531688 cttatcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaaat 28531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 2206532 - 2206592
Alignment:
Q  27 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 87  Q
    |||||||||||||||| || ||||||||||||||||||  |||| |||| |||||| ||||    
T  2206532 tgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 2514625 - 2514709
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 92  Q
    ||||||||  ||||| ||||||||||| ||||| | ||  ||||||||||||||||||||| || ||| |||| | |||||||||    
T  2514625 cttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagtt 2514709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 7713950 - 7714022
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| ||| | ||||||||||  || |||  || |||||||||||||||||||||||| |||||||||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataa 7714022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 11340767 - 11340687
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  11340767 catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 11340687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 20672002 - 20671938
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||| ||||||||||| ||||| |  | |||||||||||||||||||||||| ||||| |||||    
T  20672002 aagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataa 20671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 21959652 - 21959732
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||| ||||| ||| ||||||| |||||   || ||||||||||||||||||||| || ||| ||||||| ||||||    
T  21959652 ttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 27693544 - 27693512
Alignment:
Q  50 aagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||||||||||||||    
T  27693544 aagataaaataaagtcaaattattttcatataa 27693512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 281956 - 281913
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  281956 caaaagataaaataaagtcaacttgttttcatataagctataag 281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 10400192 - 10400274
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaa-taaagtcaaattattttcatataacctataag 90  Q
    ||||||||| || |||||||||||||| ||||||  ||  ||||||||||| |||||||||||| || |||||||| |||||||    
T  10400192 cttatcatataaatgtttatgtataagctatttta-taataaaagataaaaataaagtcaaattgttatcatataagctataag 10400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 27713469 - 27713504
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||||| |||||||||||    
T  27713469 caaaagataaaataaagtcaaattcttttcatataa 27713504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 27857319 - 27857358
Alignment:
Q  29 tataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  27857319 tataagttacttttgtaacaaaagataaaataaagtcaaa 27857358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 32513759 - 32513821
Alignment:
Q  19 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||| ||||||||||| | || ||||| |||||||||||||||| ||||| |||||||    
T  32513759 agtgtttatgcataagttatttctataacaaaa-ataaaataaagtcaaactatttccatataa 32513821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 1402958 - 1403000
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  1402958 caaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 2117365 - 2117411
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  2117365 caaaggataaaacaaagtcaaactattttcatataatctataagttg 2117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 7354131 - 7354201
Alignment:
Q  12 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||| || ||||||||  ||||| | || |||||||||||||||| || || |||||||||||||    
T  7354131 tcatacaagttttcatgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataa 7354201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 9093687 - 9093621
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    ||||| ||||| ||||| | || |||||||||||||||||| ||||| ||||| ||||| |||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataag 9093621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 10749335 - 10749301
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||| |||||||||||||||||    
T  10749335 aaaagataaaataaagttaaattattttcatataa 10749301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 24476541 - 24476599
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||| ||||| | || |||||||||||||  ||| |||||||||||||||||    
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataa 24476599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 28660879 - 28660833
Alignment:
Q  36 tatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| || ||| |||||||||||||| |||||||||||||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcatataa 28660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 31672614 - 31672544
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    |||||||||||||||||||||||||  |||||   |  ||||| |||||||||||||||| | ||||||||    
T  31672614 ttatcatacaagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgttttcata 31672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 34429826 - 34429752
Alignment:
Q  19 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||||||||||||||| | ||  || ||||||||||||||| || | ||||| ||||| ||||||||||    
T  34429826 agtgattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 2023778 - 2023725
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat 59  Q
    ||||||||||| ||||||| || |||||||||||| | || |||||||||||||    
T  2023778 cacttatcatataagtgttcatatataagttatttctatagcaaaagataaaat 2023725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 2732341 - 2732312
Alignment:
Q  53 ataaaataaagtcaaattattttcatataa 82  Q
    ||||||||||||||||||||||||||||||    
T  2732341 ataaaataaagtcaaattattttcatataa 2732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3155100 - 3155181
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||| || || ||||||||||| ||| | | |  |||||||||||| ||||||||| | ||| |||||||||||||||    
T  3155100 ttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataag 3155181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 4325454 - 4325381
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||| |||||| |||||||||| | ||  ||| ||||||||| || |||| |||||||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataa 4325381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 5554910 - 5554861
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat 59  Q
    ||||||| | ||||||||||||||||||||| | || |||||||||||||    
T  5554910 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 11363475 - 11363430
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||    
T  11363475 aaaagataaaataaagttaaattattttcatgtaagttataagttg 11363430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 2027931 - 2027891
Alignment:
Q  28 gtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  2027931 gtataagctatttttgtattaaaagataaaataaagtcaaa 2027891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 2034579 - 2034512
Alignment:
Q  14 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| ||||||||||| | |||||  | |||| ||||||||||||||||| || ||||||||||    
T  2034579 atacaagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 2034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 8420344 - 8420284
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 68  Q
    ||||||||| ||||| ||||||| ||||||||| | ||  ||| |||||||||||||||||    
T  8420344 cttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaa 8420284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 9559672 - 9559620
Alignment:
Q  24 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 76  Q
    ||||||||||||||||| | || |||||||||||||||| | ||||| |||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttc 9559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 29940725 - 29940789
Alignment:
Q  14 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 78  Q
    ||||||||| ||| ||||||| | ||| | || ||||||||||||||||||||| || |||||||    
T  29940725 atacaagtgcttaagtataagctttttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 33116538 - 33116578
Alignment:
Q  18 aagtgtttatgtataagttatttttgtaccaaaagataaaa 58  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  33116538 aagtgtttatgtataagttatttctttaacaaaagataaaa 33116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 34405027 - 34405095
Alignment:
Q  7 acttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 75  Q
    |||||| ||| |||||||||| |||||| ||||| | ||  ||||| ||||||||||||||||| ||||    
T  34405027 acttatgatataagtgtttatctataagctatttctataataaaagttaaaataaagtcaaattgtttt 34405095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 1219 - 1147
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 2756 - 2828
Alignment:
Q  10 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 51508 - 51572
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||| | ||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgttttcatatcaactataa 51572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 69054 - 69016
Alignment:
Q  44 taccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  69054 taccaaaatataaaataaagtcaaattattttcatataa 69016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 34104 - 34063
Alignment:
Q  48 aaaagataaaataaagtcaaattattttcatataacctataa 89  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  34104 aaaagataaaataaagtcaaattattttcatatgaactataa 34063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 1866 - 1786
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  1866 catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 3956 - 3876
Alignment:
Q  13 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 93  Q
    |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  3956 catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 3876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 18475 - 18440
Alignment:
Q  47 caaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||||||||||| |||||||||||    
T  18475 caaaagataaaataaagtcaaattcttttcatataa 18440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 9922 - 9848
Alignment:
Q  8 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    ||||||||| | ||| ||||||||||||||||| | || ||||| ||||||| ||||||||   |||||||||||    
T  9922 cttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataa 9848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 6786 - 6713
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||||| ||||| ||||||||||  ||||| | || ||||| ||||| | |||||||||| ||||||||    
T  6786 cacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcata 6713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 10158 - 10129
Alignment:
Q  47 caaaagataaaataaagtcaaattattttc 76  Q
    ||||||||||||||||||||||||||||||    
T  10158 caaaagataaaataaagtcaaattattttc 10129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 20235 - 20292
Alignment:
Q  25 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 82  Q
    |||||||||||||||| | ||  |||| ||||||||| |||||||| |||||||||||    
T  20235 tatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 6600 - 6563
Alignment:
Q  53 ataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  6600 ataaaataaagtcaaactattttcatataagctataag 6563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 13620 - 13583
Alignment:
Q  53 ataaaataaagtcaaattattttcatataacctataag 90  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  13620 ataaaataaagtcaaactattttcatataagctataag 13583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 63431 - 63366
Alignment:
Q  9 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 74  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  63431 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 63366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 116705 - 116632
Alignment:
Q  6 cacttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 79  Q
    ||||||||||| ||||| ||||||||||  ||||| | || ||||| ||||| | |||||||||| ||||||||    
T  116705 cacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcata 116632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University