View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4561_high_6 (Length: 256)
Name: NF4561_high_6
Description: NF4561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4561_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 38589314 - 38589193
Alignment:
| Q |
22 |
aggctgtctttctcatctattttgagacaaaggaaacaattgaactacctataagaatccattatccttatgcagcttctgtgtctaattagtatattat |
121 |
Q |
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| T |
38589314 |
aggctgtctttctcatctattttgagacaaaggaaacaattgaactacctataagaatccattatccttatgcagcttctgtgtctaattagtatattat |
38589215 |
T |
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| Q |
122 |
aatcaatcatcttctcccactc |
143 |
Q |
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|||||||||||||||||||||| |
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| T |
38589214 |
aatcaatcatcttctcccactc |
38589193 |
T |
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