View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4564-Insertion-4 (Length: 608)

Name: NF4564-Insertion-4
Description: NF4564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4564-Insertion-4
NF4564-Insertion-4
[»] chr1 (16 HSPs)
chr1 (8-306)||(50323842-50324144)
chr1 (332-488)||(50324173-50324329)
chr1 (334-521)||(28235580-28235767)
chr1 (381-486)||(8257619-8257724)
chr1 (106-248)||(8257348-8257494)
chr1 (373-522)||(28282907-28283056)
chr1 (482-521)||(45484841-45484880)
chr1 (415-521)||(31985152-31985258)
chr1 (335-443)||(51727813-51727921)
chr1 (447-521)||(32364957-32365031)
chr1 (338-521)||(50656235-50656418)
chr1 (482-524)||(9294556-9294598)
chr1 (462-524)||(24639596-24639658)
chr1 (449-519)||(37670737-37670807)
chr1 (447-524)||(44258513-44258590)
chr1 (360-436)||(33690761-33690837)
[»] chr2 (16 HSPs)
chr2 (8-306)||(37484920-37485222)
chr2 (332-503)||(37485247-37485418)
chr2 (430-521)||(3989715-3989806)
chr2 (106-236)||(3989465-3989598)
chr2 (334-485)||(39679364-39679515)
chr2 (447-523)||(12364659-12364735)
chr2 (344-444)||(37253940-37254040)
chr2 (447-521)||(37314227-37314301)
chr2 (345-521)||(23292316-23292492)
chr2 (473-521)||(31901815-31901863)
chr2 (469-523)||(19262284-19262338)
chr2 (473-523)||(29523120-29523170)
chr2 (337-383)||(42346235-42346281)
chr2 (473-526)||(18541513-18541566)
chr2 (445-490)||(37254978-37255023)
chr2 (449-521)||(43868962-43869034)
[»] chr8 (8 HSPs)
chr8 (334-526)||(40484684-40484876)
chr8 (344-521)||(27844956-27845133)
chr8 (345-521)||(45218757-45218933)
chr8 (384-525)||(31892408-31892549)
chr8 (447-521)||(3656553-3656627)
chr8 (344-489)||(36834633-36834778)
chr8 (462-521)||(27678559-27678618)
chr8 (338-389)||(29868973-29869024)
[»] chr7 (11 HSPs)
chr7 (334-521)||(36098824-36099011)
chr7 (334-523)||(34190956-34191145)
chr7 (431-521)||(20130581-20130671)
chr7 (383-521)||(44605041-44605179)
chr7 (339-521)||(20623918-20624100)
chr7 (466-521)||(1583206-1583261)
chr7 (344-391)||(16561808-16561855)
chr7 (344-391)||(16603807-16603854)
chr7 (491-525)||(29984209-29984243)
chr7 (473-521)||(11733479-11733527)
chr7 (469-513)||(32009955-32009999)
[»] chr6 (6 HSPs)
chr6 (334-521)||(23596548-23596735)
chr6 (532-607)||(25370926-25371001)
chr6 (344-391)||(19762744-19762791)
chr6 (473-521)||(22350471-22350519)
chr6 (447-521)||(29291646-29291720)
chr6 (482-518)||(30427141-30427177)
[»] chr4 (7 HSPs)
chr4 (106-236)||(28358334-28358467)
chr4 (386-477)||(28358141-28358230)
chr4 (339-525)||(34856698-34856884)
chr4 (338-520)||(280966-281148)
chr4 (415-521)||(25511416-25511522)
chr4 (407-521)||(8260241-8260355)
chr4 (358-503)||(8133558-8133703)
[»] chr5 (6 HSPs)
chr5 (359-529)||(27193872-27194042)
chr5 (473-524)||(8760205-8760256)
chr5 (482-521)||(17643497-17643536)
chr5 (339-410)||(33224210-33224281)
chr5 (447-521)||(33898152-33898226)
chr5 (448-521)||(33224109-33224182)
[»] chr3 (11 HSPs)
chr3 (446-521)||(31482516-31482591)
chr3 (473-521)||(2848494-2848542)
chr3 (465-524)||(33635820-33635879)
chr3 (447-521)||(51536374-51536448)
chr3 (338-521)||(53612509-53612692)
chr3 (473-521)||(10258314-10258362)
chr3 (404-500)||(53724822-53724918)
chr3 (469-524)||(16056799-16056854)
chr3 (462-523)||(45103345-45103406)
chr3 (491-523)||(23241317-23241349)
chr3 (359-427)||(45159223-45159291)
[»] scaffold0332 (1 HSPs)
scaffold0332 (395-521)||(1645-1771)
[»] scaffold0036 (1 HSPs)
scaffold0036 (338-427)||(52601-52690)
[»] scaffold0131 (1 HSPs)
scaffold0131 (447-521)||(7197-7271)
[»] scaffold0070 (1 HSPs)
scaffold0070 (447-521)||(13415-13489)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 306
Target Start/End: Original strand, 50323842 - 50324144
Alignment:
Q  8 ctattcacaaccctaattggaaattat-atctctcaaatgggagtgtttgttgccgccactgctattttattgtctctgtagtcatcttttcttcaactc 106  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  50323842 ctattcacaaccctaattggaaattatcatctctcaaatgggagtgtttgttgccgccactgctattttactgtctctctagtcatcttttcttcaactc 50323941  T
Q  107 accttctctcta-ttctccaacaaat--aagacagatgtgaaaaaacaaagaacggatctaaacttctctcatcatcttcttcaactctatgtaattaaa 203  Q
    |||||||||||| |||||||||||||  |||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  50323942 accttctctctagttctccaacaaatctaagacagatgtgaataaacaaagaacaaatctaaacttctctcatcatctttttcaactctatgtaattaaa 50324041  T
Q  204 acaacaaagtgatgtgtttgaaaaagtgggtcaccactcgattttagcttttgggaagaaagctgatgcctgagagatgtccgccttcatacatcccttc 303  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50324042 acaacaaagtgatgtgtttgaaaaaatgggtcaccactcgattttagcttttgggaagaaagctgatgcctgagagatgaccgccttcatacatcccttc 50324141  T
Q  304 taa 306  Q
    |||    
T  50324142 taa 50324144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 332 - 488
Target Start/End: Original strand, 50324173 - 50324329
Alignment:
Q  332 caatgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagc 431  Q
    |||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50324173 caatgcattgaatcggtccggttcattaaaccggccgagtcgtcggtttttaccggttttatccgagccacaccggttttcaccggttcaagtgcacagc 50324272  T
Q  432 cgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccg 488  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50324273 cgatccattaagctgctcgaaccgaacataccaccgattcccggtctgaccggtccg 50324329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 334 - 521
Target Start/End: Original strand, 28235580 - 28235767
Alignment:
Q  334 atgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||| |  | ||||   |||    
T  28235580 atgcattgacccggtccggttcaccaaaccggccgagtcaccgattttgaccggttttggccgagtcacaccggttctcaccgggttgaatgcatgtccg 28235679  T
Q  434 atccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||| | |  ||||||||||| || ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  28235680 atccatcatgtagctcgaaccggccacaccaccgattcacggtcggaccggttcgaccggccggtccggtccggtttttaaaactatg 28235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 381 - 486
Target Start/End: Original strand, 8257619 - 8257724
Alignment:
Q  381 ttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctga 480  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  8257619 ttaccggttttgtccgagccacaccggttttcatcggttcaaatgcacaactgatccattaagctgctcgaatcggacataccaccggttcccggtctga 8257718  T
Q  481 ccggtc 486  Q
    | ||||    
T  8257719 ctggtc 8257724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 248
Target Start/End: Original strand, 8257348 - 8257494
Alignment:
Q  106 caccttctctcta-ttctccaacaaat--aagacagatgtgaaaaaacaaagaacggatctaaacttctctcatcatcttcttcaactctatgtaattaa 202  Q
    ||||||||||||| |||||||||||||  |||||| || || ||||| ||||||| ||||||||||| |||||||||| ||||||| | ||||||||| |    
T  8257348 caccttctctctagttctccaacaaatgtaagacacatatgcaaaaataaagaacagatctaaacttttctcatcatcctcttcaattttatgtaattga 8257447  T
Q  203 aacaacaaagtgatgtgtttgaaaaagtgggtca-ccactcgatttt 248  Q
     | ||||||||| ||| |||| |||| ||||||| |||||| |||||    
T  8257448 gataacaaagtggtgtatttggaaaaatgggtcatccactccatttt 8257494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 522
Target Start/End: Original strand, 28282907 - 28283056
Alignment:
Q  373 gccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcc 472  Q
    |||||||||||||||||||   |||| ||  |||||||| |||||||||| ||||   |||||||| ||||| |  |||||||| |||  ||||| |||     
T  28282907 gccgatttttaccggtttttagcgagtcatgccggttttgaccggttcaattgcatgcccgatccaataagcagaccgaaccggtcatgtcaccggttca 28283006  T
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatga 522  Q
    ||||   ||||||| || |||||| |||||| ||| ||||||||||||||    
T  28283007 cggttaaaccggtcggaccggccgatccggttcgggttttaaaactatga 28283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 521
Target Start/End: Original strand, 45484841 - 45484880
Alignment:
Q  482 cggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  45484841 cggtctgatcggccggtccggtccggtttttaaaactatg 45484880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 521
Target Start/End: Complemental strand, 31985258 - 31985152
Alignment:
Q  415 cggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaa 514  Q
    |||||||| |||| | ||||||||   | ||||||||||||| |||   |||| |||| |||  ||||||||||| ||||||||||||||||  ||||||    
T  31985258 cggttcaactgcatatccgatccaactatctgctcgaaccggtcatgttaccggttcctggttggaccggtccgaccggccggtccggtccgagttttaa 31985159  T
Q  515 aactatg 521  Q
    |||||||    
T  31985158 aactatg 31985152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 443
Target Start/End: Original strand, 51727813 - 51727921
Alignment:
Q  335 tgcattgaaccggtccggttcactaaaccgg-ccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||| ||| || || ||||  ||||| | | |||||| | |||||||||| |||||  |||    
T  51727813 tgcattgaaccggtccggttcaccaaaccggtccgagtcaccggtttcta-cgattttccccgagtcgcgccggttctgaccggttcaactgcacgaccg 51727911  T
Q  434 atccattaag 443  Q
    ||||||||||    
T  51727912 atccattaag 51727921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 521
Target Start/End: Original strand, 32364957 - 32365031
Alignment:
Q  447 ctcgaaccggacatac-caccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||||||||  ||||||||||||||||||    
T  32364957 ctcgaaccggac-tacacaccggttcacggtcggaccggttcgaccggccggtccgagccggtttttaaaactatg 32365031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 521
Target Start/End: Original strand, 50656235 - 50656418
Alignment:
Q  338 attgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatcc 437  Q
    ||||| |||||||||||||  ||||| |||||||| ||| |||| |||||||||   |||| || ||||||||| || ||||||| | ||   |||||||    
T  50656235 attgacccggtccggttcatcaaacctgccgagtcaccggttttcaccggtttttagcgagtcataccggttttgactggttcaactacatctccgatcc 50656334  T
Q  438 attaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    | ||||| |  |||||||| || | | ||| ||| ||||  || |||||  | ||||||| ||||||||  |||||||||||||    
T  50656335 aataagcagaccgaaccggtcacatccccggttcacggttcgatcggtcgaaccggccgggccggtccgagttttaaaactatg 50656418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 524
Target Start/End: Original strand, 9294556 - 9294598
Alignment:
Q  482 cggtccgatcggccggtccggtccggtttttaaaactatgatt 524  Q
    ||||| || ||||||||||||||||||||| ||||||||||||    
T  9294556 cggtcggaccggccggtccggtccggttttcaaaactatgatt 9294598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 524
Target Start/End: Original strand, 24639596 - 24639658
Alignment:
Q  462 ccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgatt 524  Q
    |||||| |||| |||  ||||||| ||| |||||||||||  |||||||||||||||||||||    
T  24639596 ccaccggttccaggttggaccggttcgaccggccggtccgagccggtttttaaaactatgatt 24639658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 37670737 - 37670807
Alignment:
Q  449 cgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaacta 519  Q
    ||||||||||| ||||||| ||| ||||  ||||||||||||||||||||  |  | ||||||||||||||    
T  37670737 cgaaccggacacaccaccggttcacggttcgaccggtccgatcggccggtttgagctggtttttaaaacta 37670807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 44258513 - 44258590
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgatt 524  Q
    |||||||||| ||  |||||| |||| |||| ||||||| | | ||| |||||||||||| |||| ||||||||||||    
T  44258513 ctcgaaccggtcaccccaccggttcctggtcggaccggttcaaccggacggtccggtccgattttcaaaactatgatt 44258590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 33690761 - 33690837
Alignment:
Q  360 aaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatc 436  Q
    ||||||||||||| ||| |||| ||||||||| | |||| | ||||||||| ||||| ||||| ||||  |||||||    
T  33690761 aaccggccgagtcaccggttttgaccggttttatacgagtctcaccggtttacaccgattcaattgcatggccgatc 33690837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 306
Target Start/End: Original strand, 37484920 - 37485222
Alignment:
Q  8 ctattcacaaccctaattggaaattat-atctctcaaatgggagtgtttgttgccgccactgctattttattgtctctgtagtcatcttttcttcaactc 106  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  37484920 ctattcacaatcctaattggaaattatcatctctcaaatgggagtgtttgttgccgccactgctattttactggctctctagtcatcttttcttcaactc 37485019  T
Q  107 accttctctcta-ttctccaacaaat--aagacagatgtgaaaaaacaaagaacggatctaaacttctctcatcatcttcttcaactctatgtaattaaa 203  Q
    || ||||||||  |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  37485020 acattctctctggttctccaacaaatctaagacagatgtgaataaacaaagaacagatctaaacttctctcatcatctttttcaactctatgtaattaaa 37485119  T
Q  204 acaacaaagtgatgtgtttgaaaaagtgggtcaccactcgattttagcttttgggaagaaagctgatgcctgagagatgtccgccttcatacatcccttc 303  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37485120 acaacaaagtgatgtgtttgaaaaaatgggtcaccactcgattttagcttttgggaagaaagctgatgcctgagagatgaccgccttcatacatcccttc 37485219  T
Q  304 taa 306  Q
    |||    
T  37485220 taa 37485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 332 - 503
Target Start/End: Original strand, 37485247 - 37485418
Alignment:
Q  332 caatgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagc 431  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  37485247 caatgcattgaaccggtccggttcattaaaccagccgagtcgccggtttttacctgttttgtccgaaccacactggttttcaccggttcaagtgcacagc 37485346  T
Q  432 cgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggt 503  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||    
T  37485347 caatccattaagctgctcgaaccggacataccaccggttcccggtctgactggtccgaccgaccggtccggt 37485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 430 - 521
Target Start/End: Original strand, 3989715 - 3989806
Alignment:
Q  430 gccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3989715 gccgatccattaagctgctcgaaccggacataccaccggttcccggtctgaccggtccgaccggccggtccggtccggtttttaaaactatg 3989806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 3989465 - 3989598
Alignment:
Q  106 caccttctctctat-tctccaacaaata--agacagatgtgaaaaaacaaagaacggatctaaacttctctcatcatcttcttcaactctatgtaattaa 202  Q
    |||||||||||||  |||||||||||||  | ||| || || ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |    
T  3989465 caccttctctctacctctccaacaaatataatacacatatgcaaaaacaaagaacagatctaaacttctctcatcatcctcttcaattctatgtaattga 3989564  T
Q  203 aacaacaaagtgatgtgtttgaaaaagtgggtca 236  Q
     ||||||||||| ||| ||||||||| |||||||    
T  3989565 gacaacaaagtggtgtatttgaaaaaatgggtca 3989598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 485
Target Start/End: Original strand, 39679364 - 39679515
Alignment:
Q  334 atgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||| |||||||||||||| ||| |||||||||| |||||||| | | |||||| ||||| |||||||||| | ||||| | || ||||   |||    
T  39679364 atgcattgacccggtccggttcaccaaatcggccgagtcaccgattttgatcagttttggccgagtcacaccggttcttaccgggttaaatgcatgtccg 39679463  T
Q  434 atccattaagctgctcgaaccggacataccaccgattcccggtctgaccggt 485  Q
    ||||||   |  ||||||||||| || ||||||| ||| ||||| |||||||    
T  39679464 atccatcttgtagctcgaaccggccacaccaccggttcacggtcggaccggt 39679515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 12364735 - 12364659
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgat 523  Q
    |||||||||| ||||||||||||| |||||  ||||||||| | |||||||||||  |||| |||||||||||||||    
T  12364735 ctcgaaccggccataccaccgatttccggttcgaccggtccaaccggccggtccgagccgggttttaaaactatgat 12364659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 37254040 - 37253940
Alignment:
Q  344 ccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaag 443  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||   |||| ||  |||||||| |||||||||| ||||   |||||||| ||||    
T  37254040 ccggttcggttcattaaaccggccgagtggccgatttttaccggtttttagcgagtcatgccggttttgaccggttcaattgcatgcccgatccaataag 37253941  T
Q  444 c 444  Q
    |    
T  37253940 c 37253940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 37314301 - 37314227
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||| ||  |||||| |||| |||| ||||||| | | ||||||||||||||||||||| |||||||||    
T  37314301 ctcgaaccggtcaccccaccggttcctggtcggaccggttcaaccggccggtccggtccggttttcaaaactatg 37314227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 521
Target Start/End: Complemental strand, 23292492 - 23292316
Alignment:
Q  345 cggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagc 444  Q
    ||||||||||||  |||||||||||||| ||| |||| |||||||||   |||| || ||| ||||| || ||||||| | ||   |||||||| |||||    
T  23292492 cggtccggttcatcaaaccggccgagtcaccggttttcaccggtttttagcgagtcataccagttttgactggttcaactacatctccgatccaataagc 23292393  T
Q  445 tgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
     |  |||||||| || | | ||| ||| ||||  || ||||| || ||||||||| ||||||  |||||||||||||    
T  23292392 agaccgaaccggtcacatccccggttcacggttcgatcggtcggaccggccggtcaggtccgagttttaaaactatg 23292316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 31901815 - 31901863
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| ||||||||||| |||||| |||||||||||||| |||||||||    
T  31901815 cggtcggaccggtccgaccggccgatccggtccggttttcaaaactatg 31901863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 523
Target Start/End: Complemental strand, 19262338 - 19262284
Alignment:
Q  469 ttcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgat 523  Q
    ||||||| | ||||||  ||| |||||||||||||||| ||||||||||||||||    
T  19262338 ttcccgggcggaccggctcgaccggccggtccggtccgatttttaaaactatgat 19262284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 29523170 - 29523120
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgat 523  Q
    ||||| ||||||| ||| | ||||||||||||||||||| |||||||||||    
T  29523170 cggtcggaccggttcgaccagccggtccggtccggttttcaaaactatgat 29523120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 42346235 - 42346281
Alignment:
Q  337 cattgaaccggtccggttcactaaaccggccgagtcgccgattttta 383  Q
    |||||| |||||||||||||| |||||||||||||| ||| ||||||    
T  42346235 cattgacccggtccggttcaccaaaccggccgagtcaccggttttta 42346281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 18541513 - 18541566
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgattaa 526  Q
    ||||| ||| ||| ||| ||||||||||||||||||||| ||||||||| ||||    
T  18541513 cggtcggactggttcgaccggccggtccggtccggttttcaaaactatgcttaa 18541566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 37255023 - 37254978
Alignment:
Q  445 tgctcgaaccggacataccaccgattcccggtctgaccggtccgat 490  Q
    |||||||||||||||||||||| | |||||||  ||||||||||||    
T  37255023 tgctcgaaccggacataccaccaagtcccggttagaccggtccgat 37254978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 521
Target Start/End: Complemental strand, 43869034 - 43868962
Alignment:
Q  449 cgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||| |||||| ||||||| ||| || |  ||||||||| | |||||||||||  ||||||||||||||||||    
T  43869034 cgaatcggacacaccaccggttcacgattcgaccggtccaaccggccggtccgagccggtttttaaaactatg 43868962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 334 - 526
Target Start/End: Complemental strand, 40484876 - 40484684
Alignment:
Q  334 atgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||| |  | ||||   |||    
T  40484876 atgcattgacccggtccggttcaccaaaccggccgagtcaccgattttgaccggttttggccgagtcacaccggttctcaccgggttgaatgcatgtccg 40484777  T
Q  434 atccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgattaa 526  Q
    |||||| | |  ||||||||||| || ||||||| ||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  40484776 atccatcatgtagctcgaaccggccacaccaccggttcacggtcggaccggttcgaccggccggtccggtccggtttttaaaactatgcttaa 40484684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 521
Target Start/End: Complemental strand, 27845133 - 27844956
Alignment:
Q  344 ccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaag 443  Q
    ||||| ||||||| ||||||||| |||| |||||||||||||||||||   |||| ||  |||||||| |||||||||| ||||   |||||||| |||     
T  27845133 ccggttcggttcattaaaccggctgagtggccgatttttaccggtttttaacgagtcatgccggttttgaccggttcaattgcatgtccgatccaataaa 27845034  T
Q  444 ctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    | |  | |||||| |||| ||||| ||  ||||   |||| || || ||||||||||||||||| |||||||||||||    
T  27845033 cagaccaaaccggtcatatcaccggtttacggttcaaccgttcggaccggccggtccggtccgggttttaaaactatg 27844956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 521
Target Start/End: Complemental strand, 45218933 - 45218757
Alignment:
Q  345 cggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagc 444  Q
    ||||||||||||| |||||||| ||||| |||| ||||||||  ||    |||| ||| |||||| |||||||||||| |||||| |||||||| ||||     
T  45218933 cggtccggttcaccaaaccggctgagtcaccgagttttaccgagttcaagcgagtcacgccggttctcaccggttcaactgcacaaccgatccaataagt 45218834  T
Q  445 tgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
     | ||||||| || | ||||||| ||| ||||   ||||||| || || ||||||||  |||| |||||||||||||    
T  45218833 agatcgaaccagatacaccaccggttcacggttcaaccggtcggaccgtccggtccgagccgggttttaaaactatg 45218757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 525
Target Start/End: Complemental strand, 31892549 - 31892408
Alignment:
Q  384 ccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccg 483  Q
    ||||||||  |||||||| ||||||||| |||||||||| | |||  |||||||| ||| | | |||||||||  ||||||||| |||  ||||  || |    
T  31892549 ccggtttttaccgagccataccggttttaaccggttcaattacacgaccgatccaataatcagttcgaaccggttataccaccggttcatggtccaactg 31892450  T
Q  484 gtccgatcggccggtccggtccggtttttaaaactatgatta 525  Q
    ||| || ||||||| |||  |||| |||||||||||||||||    
T  31892449 gtcggaccggccggcccgagccgggttttaaaactatgatta 31892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 521
Target Start/End: Original strand, 3656553 - 3656627
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||| ||| |||||| ||| ||||| ||||||| | | ||||||||||||||| ||||| |||||||||    
T  3656553 ctcgaaccggtcatcccaccggttcacggtcggaccggttcaaccggccggtccggtccagttttcaaaactatg 3656627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 344 - 489
Target Start/End: Original strand, 36834633 - 36834778
Alignment:
Q  344 ccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaag 443  Q
    ||||||||||||||||||||||||||||  ||| |||| |||| |||| ||| ||  | |||||||  ||||||||||| | ||   ||||||||    |    
T  36834633 ccggtccggttcactaaaccggccgagttaccggttttcaccgattttttccaagttataccggttcacaccggttcaattacatgaccgatccaacttg 36834732  T
Q  444 ctgctcgaaccggacataccaccgattcccggtctgaccggtccga 489  Q
    |||||||||||||  ||||||||| |||| |||   ||||||||||    
T  36834733 ctgctcgaaccggctataccaccggttcctggttcaaccggtccga 36834778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 521
Target Start/End: Complemental strand, 27678618 - 27678559
Alignment:
Q  462 ccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||| |||| |||| ||||||| | | ||||||||||||||||||||| |||||||||    
T  27678618 ccaccggttcctggtcggaccggttcaaccggccggtccggtccggttttcaaaactatg 27678559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 29868973 - 29869024
Alignment:
Q  338 attgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggtt 389  Q
    ||||| ||||||||| |||| |||||||||||||| ||| ||||||||||||    
T  29868973 attgacccggtccggctcaccaaaccggccgagtcaccggtttttaccggtt 29869024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 5e-42; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 334 - 521
Target Start/End: Complemental strand, 36099011 - 36098824
Alignment:
Q  334 atgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||| |  | ||||   |||    
T  36099011 atgcattgacccggtccggttcaccaaaccggccgagtcaccgattttgaccggttttggccgagtcacaccggttctcaccgggttgaatgcatgtccg 36098912  T
Q  434 atccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||| | |  ||||||||||| || ||||||| ||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  36098911 atccatcatgtagctcgaaccggccacaccaccggttcacggtcggaccggttcgaccggccggtccggtccggtttttaaaactatg 36098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 334 - 523
Target Start/End: Complemental strand, 34191145 - 34190956
Alignment:
Q  334 atgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||| || |||| || |||||| || ||||   |||    
T  34191145 atgcattgacccggtccggttcaccaaaccggctgagtcaccggtttttaccggttttgtccgagccatactggttctctccggtttaaatgcatgtccg 34191046  T
Q  434 atccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgat 523  Q
    |||||  | | |||||||||||| || | ||||||||  ||||| || |||| ||| |||||||||||||| ||||||||||||||||||    
T  34191045 atccaacatgttgctcgaaccggccacatcaccgatttacggtcggatcggttcgaccggccggtccggtctggtttttaaaactatgat 34190956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 431 - 521
Target Start/End: Complemental strand, 20130671 - 20130581
Alignment:
Q  431 ccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||| | | |||||||||||||||| ||| | ||||||||||||||||| | | ||||||||||| |||| ||||||||||||||    
T  20130671 ccgatccatttatcagctcgaaccggacatagcactggttcccggtctgaccggttcaaccggccggtccgatccgatttttaaaactatg 20130581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 521
Target Start/End: Complemental strand, 44605179 - 44605041
Alignment:
Q  383 accggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatc-cattaagctgctcgaaccggacataccaccgattcccggtctgac 481  Q
    ||||||||| |||||||||| |||||||| |||||||||| |||||||||||||  ||||| | | ||||||||| |||||||| | ||| | |||  ||    
T  44605179 accggttttttccgagccacgccggttttaaccggttcaattgcacagccgatctgattaa-cagttcgaaccggtcataccactggttcactgtccaac 44605081  T
Q  482 cggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| || |||||||||||  |||  |||||||||||||    
T  44605080 cggtcggaccggccggtccgagccgagttttaaaactatg 44605041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 521
Target Start/End: Original strand, 20623918 - 20624100
Alignment:
Q  339 ttgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatcca 438  Q
    ||||||||||||||||   |||||||||||| || ||| |||||||||||||   ||||||||   |||||| ||||||||  | ||||  |||||||||    
T  20623918 ttgaaccggtccggttttgtaaaccggccgattcaccggtttttaccggtttccgccgagccatgtcggtttacaccggtttgattgcatggccgatcca 20624017  T
Q  439 ttaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
     |||   | | ||||||||||  |||||| |||  |||| ||||||| | | ||||||||||| ||||||||| |||||||||    
T  20624018 ataaatagattgaaccggacaccccaccggttcatggtccgaccggttcaaccggccggtccgatccggttttaaaaactatg 20624100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Original strand, 1583206 - 1583261
Alignment:
Q  466 cgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||||||| || ||||||| | | |||||||||||||||| ||||||||||||||    
T  1583206 cgattcccgatccgaccggttcaaccggccggtccggtccgatttttaaaactatg 1583261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 391
Target Start/End: Original strand, 16561808 - 16561855
Alignment:
Q  344 ccggtccggttcactaaaccggccgagtcgccgatttttaccggtttt 391  Q
    ||||| ||||||| |||||||||||||| |||||||||||||| ||||    
T  16561808 ccggttcggttcattaaaccggccgagtggccgatttttaccgatttt 16561855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 391
Target Start/End: Complemental strand, 16603854 - 16603807
Alignment:
Q  344 ccggtccggttcactaaaccggccgagtcgccgatttttaccggtttt 391  Q
    ||||| ||||||| |||||||||||||| |||||||||||||| ||||    
T  16603854 ccggttcggttcattaaaccggccgagtggccgatttttaccgatttt 16603807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Original strand, 29984209 - 29984243
Alignment:
Q  491 cggccggtccggtccggtttttaaaactatgatta 525  Q
    ||||||||||||||||||||| |||||||||||||    
T  29984209 cggccggtccggtccggttttcaaaactatgatta 29984243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 11733527 - 11733479
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| ||||||| ||| || |||||||||||||||||| |||||||||    
T  11733527 cggtcggaccggttcgaccgaccggtccggtccggttttcaaaactatg 11733479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 32009955 - 32009999
Alignment:
Q  469 ttcccggtctgaccggtccgatcggccggtccggtccggttttta 513  Q
    ||||||||  ||||||||||| ||||||||||||| |||||||||    
T  32009955 ttcccggttcgaccggtccgaccggccggtccggttcggttttta 32009999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 334 - 521
Target Start/End: Original strand, 23596548 - 23596735
Alignment:
Q  334 atgcattgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccg 433  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||| | ||||||| || |||||| || ||||   |||    
T  23596548 atgcattgacccggtccggttcaccaaaccggctgagtcaccggtttttaccggttttgtccgagctataccggttctctccggtttaaatgcatgtccg 23596647  T
Q  434 atccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||  | | |||||||||||| || | ||||||||  ||||| ||||||| ||| || ||||||||||| |||||| |||||||||    
T  23596648 atccaacatgttgctcgaaccggccacatcaccgatttacggtcggaccggttcgaccgtccggtccggtctggttttaaaaactatg 23596735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 532 - 607
Target Start/End: Complemental strand, 25371001 - 25370926
Alignment:
Q  532 tagatgaggccacacatcttttgtcaatgcctttaccatgtaaactcttttctcaatagttgtgacgctatttagt 607  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  25371001 tagatgaggccacacacattttgccaatgcctttaccatgtaaactctttactcaatagttgtaacgctatttagt 25370926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 391
Target Start/End: Complemental strand, 19762791 - 19762744
Alignment:
Q  344 ccggtccggttcactaaaccggccgagtcgccgatttttaccggtttt 391  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  19762791 ccggttcggttcattaaaccggccgagtggccgatttttaccggtttt 19762744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 22350519 - 22350471
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| ||||||| ||| ||||||||||||||||||||| |||||||||    
T  22350519 cggtcggaccggttcgaccggccggtccggtccggttttcaaaactatg 22350471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 29291720 - 29291646
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||| |||||| ||||| ||| || ||||| |||| | | ||||||||||||||||  |||||||||||||    
T  29291720 ctcgaaccagacatatcaccggttcacgatctgatcggttcaaccggccggtccggtccgagttttaaaactatg 29291646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 518
Target Start/End: Original strand, 30427141 - 30427177
Alignment:
Q  482 cggtccgatcggccggtccggtccggtttttaaaact 518  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  30427141 cggtccgaccggccggtccgatccggtttttaaaact 30427177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 28358467 - 28358334
Alignment:
Q  106 caccttctctctat-tctccaacaaata--agacagatgtgaaaaaacaaagaacggatctaaacttctctcatcatcttcttcaactctatgtaattaa 202  Q
    |||||||||||||| |||||||||||||  ||||| || || ||||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| |    
T  28358467 caccttctctctatctctccaacaaatataagacacatatgcaaaaacaaagaacagatttaaacttctctcatcatcctcttcaattctatgtaattga 28358368  T
Q  203 aacaacaaagtgatgtgtttgaaaaagtgggtca 236  Q
     ||||||||||| ||| |||| |||| |||||||    
T  28358367 gacaacaaagtggtgtatttggaaaaatgggtca 28358334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 477
Target Start/End: Complemental strand, 28358230 - 28358141
Alignment:
Q  386 ggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtc 477  Q
    |||||| ||| |||||||  ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  28358230 ggttttatccaagccacattggttttcaccggttcaattgcacagc--atccattaagctgctcgaaccggacataccaccggttcccggtc 28358141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 525
Target Start/End: Original strand, 34856698 - 34856884
Alignment:
Q  339 ttgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatcca 438  Q
    ||||||||||||||||   |||||||||||| || ||| |||||||||||||   ||||||||| ||||||| ||||||||  | ||||  |||||||||    
T  34856698 ttgaaccggtccggttttgtaaaccggccgattcaccggtttttaccggtttccgccgagccacgccggtttacaccggtttgattgcatggccgatcca 34856797  T
Q  439 ttaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgatta 525  Q
     |||   | ||||||||||||  |||||| |||  |||| || |||| | | |||||||||||  |||||||| |||||||||||||    
T  34856798 ataaatagatcgaaccggacaccccaccggttcatggtccgatcggttcaaccggccggtccgagccggttttaaaaactatgatta 34856884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 520
Target Start/End: Complemental strand, 281148 - 280966
Alignment:
Q  338 attgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatcc 437  Q
    ||||| ||| |||||||| |||||||||||||||| ||||||| | |||  |||   |||| ||| |||||| | |||| ||||| |||||| |||||||    
T  281148 attgacccgctccggttcgctaaaccggccgagtcaccgatttattccgagttttagcgagtcacgccggttctgaccgattcaactgcacaaccgatcc 281049  T
Q  438 attaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactat 520  Q
    |   | | |  |||| |||||| ||||||| ||| || |  |||||| || | |||||||||||  |||||||||||||||||    
T  281048 aaatatcagaccgaatcggacacaccaccggttcacgattcgaccggcccaaccggccggtccgagccggtttttaaaactat 280966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 521
Target Start/End: Original strand, 25511416 - 25511522
Alignment:
Q  415 cggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaa 514  Q
    |||||||| |||| | ||||||||   | ||||||||||||| |||   |||| |||| |||  ||||||||||| ||||||||||||||||  ||||||    
T  25511416 cggttcaattgcatatccgatccaactatctgctcgaaccggtcatgttaccggttcctggttggaccggtccgaccggccggtccggtccgagttttaa 25511515  T
Q  515 aactatg 521  Q
    |||||||    
T  25511516 aactatg 25511522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 521
Target Start/End: Complemental strand, 8260355 - 8260241
Alignment:
Q  407 gttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccg 506  Q
    ||||||||||||| || |||| |||||||||| || || |  |||||||||||  | |||| ||| ||||   |||||||||| |||||| |||   |||    
T  8260355 gttttcaccggtttaactgcatagccgatccaatatgcagaccgaaccggacaccctaccggttctcggttgaaccggtccgaccggccgatccaagccg 8260256  T
Q  507 gtttttaaaactatg 521  Q
    |||||||||||||||    
T  8260255 gtttttaaaactatg 8260241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 503
Target Start/End: Original strand, 8133558 - 8133703
Alignment:
Q  358 taaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccgga 457  Q
    ||||||||||||||| ||| ||||  ||||||||  ||||| ||  ||||||| ||||||| ||| | || | |||||||||||||||   || || |||    
T  8133558 taaaccggccgagtcaccggttttggccggttttaaccgagtcattccggtttccaccggtccaattacataaccgatccattaagctaaccggactgga 8133657  T
Q  458 cataccaccgattcccggtctgaccggtccgatcggccggtccggt 503  Q
    || ||||||| ||| ||||   |||||||| | || ||||||||||    
T  8133658 cacaccaccggttcacggttcaaccggtccaaccgtccggtccggt 8133703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 529
Target Start/End: Complemental strand, 27194042 - 27193872
Alignment:
Q  359 aaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatc-cattaagctgctcgaaccgga 457  Q
    |||||||||||||| ||| |||  |||| |||| ||||||||||  ||||||| |||||||||| |||||||||||||  ||||| | | |||||||||     
T  27194042 aaaccggccgagtcaccggtttccaccgattttttccgagccacgtcggttttaaccggttcaattgcacagccgatctgattaa-cagttcgaaccggt 27193944  T
Q  458 cataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgattaagat 529  Q
    |||||||| | ||| |||||  ||||||| || || ||||||||  |||  ||||||||||||| |||||||    
T  27193943 cataccactggttcgcggtccaaccggtcggaccgaccggtccgagccgagttttaaaactatggttaagat 27193872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 524
Target Start/End: Complemental strand, 8760256 - 8760205
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgatt 524  Q
    ||||| ||||||| ||| |||||| |||||||||||||| ||||||||||||    
T  8760256 cggtcggaccggttcgaccggccgatccggtccggttttcaaaactatgatt 8760205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 521
Target Start/End: Complemental strand, 17643536 - 17643497
Alignment:
Q  482 cggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  17643536 cggtcggaccggccggtccggtccggtttttaaaactatg 17643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 33224281 - 33224210
Alignment:
Q  339 ttgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttt 410  Q
    ||||||||||||||||   |||||||||||| || ||| |||||||||||||   ||||||||| |||||||    
T  33224281 ttgaaccggtccggttttgtaaaccggccgattcaccggtttttaccggtttccgccgagccacgccggttt 33224210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 33898226 - 33898152
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||| ||  ||| || |||| |||| ||||||||| | |||||||| |||||||||||| |||||||||    
T  33898226 ctcgaaccggccaccccatcggttccaggtcggaccggtccaaccggccggttcggtccggttttcaaaactatg 33898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 521
Target Start/End: Complemental strand, 33224182 - 33224109
Alignment:
Q  448 tcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||||||||||  |||||| |||  |||| ||||||| | | ||||||||||| ||||||||| |||||||||    
T  33224182 tcgaaccggacaccccaccggttcatggtccgaccggttcaaccggccggtccgatccggttttaaaaactatg 33224109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 446 - 521
Target Start/End: Complemental strand, 31482591 - 31482516
Alignment:
Q  446 gctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| || ||||||||  ||| ||||||||||||||    
T  31482591 gctcgaaccggacataccaccgagtcccggttggaccggtccgaccgtccggtccgacccgatttttaaaactatg 31482516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 2848542 - 2848494
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  2848542 cggtcggaccggttcgaccggccggtccggtccggtttttaaaactatg 2848494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 524
Target Start/End: Original strand, 33635820 - 33635879
Alignment:
Q  465 ccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgatt 524  Q
    ||||||| ||||| ||||||| ||| |||||| |||||||||||||| ||||||||||||    
T  33635820 ccgattcacggtcggaccggttcgaccggccgatccggtccggttttcaaaactatgatt 33635879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 51536448 - 51536374
Alignment:
Q  447 ctcgaaccggacatac-caccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||||| ||| ||||| ||| ||||| ||||||| ||| ||||||||||| |||||||||||||||||||    
T  51536448 ctcgaaccggac-tacacaccggttcacggtcggaccggttcgaccggccggtccgatccggtttttaaaactatg 51536374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 521
Target Start/End: Original strand, 53612509 - 53612692
Alignment:
Q  338 attgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgcacagccgatcc 437  Q
    |||||||||||||||||||| |||||||||||||| ||| |||  | || ||||   ||||  || |||||| | |||||||||| |||||| || |||     
T  53612509 attgaaccggtccggttcaccaaaccggccgagtcaccggtttccaacgatttttatcgagttacgccggttctgaccggttcaactgcacaaccaatct 53612608  T
Q  438 attaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    | || || |  |||||||| ||| ||  || ||| | ||| ||||||| ||| |||||| |||||||||  |||||||||||||    
T  53612609 aataggcagaccgaaccggtcatcccttcggttcgcagtccgaccggttcgaccggccgatccggtccgaattttaaaactatg 53612692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 10258362 - 10258314
Alignment:
Q  473 cggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||| ||| ||| ||||||||||||||||||||||||| |||||||||    
T  10258362 cggtccgactggttcgatcggccggtccggtccggttttcaaaactatg 10258314  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 500
Target Start/End: Original strand, 53724822 - 53724918
Alignment:
Q  404 ccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtcc 500  Q
    ||||||||||||||||||| | || | ||||||||||||  || | | |||||||| ||||||| ||| || ||  ||||||||||||| |||||||    
T  53724822 ccggttttcaccggttcaattacataaccgatccattaaattgttaggaccggacacaccaccggttcacgatccaaccggtccgatcgaccggtcc 53724918  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 524
Target Start/End: Complemental strand, 16056854 - 16056799
Alignment:
Q  469 ttcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgatt 524  Q
    ||||||||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  16056854 ttcccggtcggaccggttcgaccagccggtccgagccggtttttaaaactatgatt 16056799  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 45103406 - 45103345
Alignment:
Q  462 ccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatgat 523  Q
    |||||| ||| |||||  |||||| ||||||||||||||||||||  |||||||| ||||||    
T  45103406 ccaccggttcacggtcgaaccggttcgatcggccggtccggtccgagttttaaaattatgat 45103345  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 491 - 523
Target Start/End: Complemental strand, 23241349 - 23241317
Alignment:
Q  491 cggccggtccggtccggtttttaaaactatgat 523  Q
    ||||||||||||||||||||| |||||||||||    
T  23241349 cggccggtccggtccggttttcaaaactatgat 23241317  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 45159223 - 45159291
Alignment:
Q  359 aaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgca 427  Q
    |||||||||||||| |||||||  |||||||||  || |||||  |||||||| |||||||||| ||||    
T  45159223 aaaccggccgagtcaccgatttccaccggtttttaccaagccaagccggttttaaccggttcaattgca 45159291  T

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Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 521
Target Start/End: Complemental strand, 1771 - 1645
Alignment:
Q  395 cgagccacaccggttttcaccggttcaagtgcacagccgatccattaagctgctcgaaccggacataccaccgattcccggtctgaccggtccgatcggc 494  Q
    |||| ||| |||||| |||||||||| | |||||| ||||||||  |||  | |||||| ||||| ||||||| ||| ||||   ||||||| || ||||    
T  1771 cgagtcacgccggttctcaccggttcgactgcacaaccgatccaacaagtagatcgaactggacacaccaccggttcacggttcaaccggtctgaccggc 1672  T
Q  495 cggtccggtccggtttttaaaactatg 521  Q
     ||||||  ||||||||||||||||||    
T  1671 aggtccgaaccggtttttaaaactatg 1645  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 52601 - 52690
Alignment:
Q  338 attgaaccggtccggttcactaaaccggccgagtcgccgatttttaccggttttgtccgagccacaccggttttcaccggttcaagtgca 427  Q
    ||||||||| ||||||||   ||||||||||| || ||| |||||||||||||   ||||| ||| ||||||| ||||||||||| ||||    
T  52601 attgaaccgctccggttctgaaaaccggccgattcaccggtttttaccggtttccgccgagtcacgccggtttacaccggttcaattgca 52690  T

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Target: scaffold0131 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 7271 - 7197
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    ||||||||||||||| ||||| ||| ||||| ||| ||| | | ||| ||||||||||||  |||||||||||||    
T  7271 ctcgaaccggacatatcaccggttcacggtccgacgggttcaaccggacggtccggtccgagttttaaaactatg 7197  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 521
Target Start/End: Original strand, 13415 - 13489
Alignment:
Q  447 ctcgaaccggacataccaccgattcccggtctgaccggtccgatcggccggtccggtccggtttttaaaactatg 521  Q
    |||||||||| ||  |||||| |||| |||| ||||||| | | |||||||| |||||||||||| |||||||||    
T  13415 ctcgaaccggtcaccccaccgcttcctggtcggaccggttcaaccggccggttcggtccggttttcaaaactatg 13489  T

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