View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4567-Insertion-3 (Length: 749)

Name: NF4567-Insertion-3
Description: NF4567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4567-Insertion-3
NF4567-Insertion-3
[»] chr2 (41 HSPs)
chr2 (214-625)||(39132799-39133216)
chr2 (8-148)||(39132574-39132714)
chr2 (699-748)||(14954622-14954671)
chr2 (697-737)||(22353198-22353238)
chr2 (696-748)||(36909866-36909918)
chr2 (697-739)||(35589419-35589461)
chr2 (697-739)||(39449149-39449191)
chr2 (699-748)||(27307254-27307303)
chr2 (701-737)||(1836014-1836050)
chr2 (700-748)||(3196110-3196158)
chr2 (698-738)||(23345022-23345062)
chr2 (699-739)||(36802895-36802935)
chr2 (697-741)||(43820771-43820815)
chr2 (699-739)||(44254598-44254638)
chr2 (698-737)||(285492-285531)
chr2 (699-738)||(2013318-2013357)
chr2 (703-738)||(4299559-4299594)
chr2 (705-748)||(6742433-6742476)
chr2 (699-738)||(30977888-30977927)
chr2 (691-737)||(2971837-2971883)
chr2 (699-737)||(3012868-3012906)
chr2 (699-737)||(6646834-6646872)
chr2 (691-737)||(15141464-15141510)
chr2 (699-745)||(18508077-18508123)
chr2 (700-738)||(21805819-21805857)
chr2 (699-737)||(29795446-29795484)
chr2 (698-748)||(36383460-36383510)
chr2 (699-737)||(37085244-37085282)
chr2 (21-105)||(39492341-39492422)
chr2 (699-748)||(3299128-3299177)
chr2 (699-748)||(5067669-5067718)
chr2 (352-385)||(9945018-9945051)
chr2 (697-738)||(10687938-10687979)
chr2 (699-736)||(11229356-11229393)
chr2 (696-741)||(13453985-13454030)
chr2 (702-739)||(14233751-14233788)
chr2 (700-741)||(15123966-15124007)
chr2 (699-748)||(29168724-29168773)
chr2 (699-748)||(29871375-29871424)
chr2 (700-741)||(30416360-30416401)
chr2 (698-739)||(43791834-43791875)
[»] chr1 (59 HSPs)
chr1 (699-748)||(11097907-11097956)
chr1 (698-739)||(2854992-2855033)
chr1 (699-748)||(7078523-7078572)
chr1 (700-738)||(16836137-16836175)
chr1 (701-739)||(33054120-33054158)
chr1 (691-737)||(45065924-45065970)
chr1 (699-737)||(50797790-50797828)
chr1 (339-384)||(14429398-14429443)
chr1 (700-737)||(18336158-18336195)
chr1 (699-748)||(26547233-26547282)
chr1 (694-739)||(32873335-32873380)
chr1 (699-748)||(35846342-35846391)
chr1 (701-738)||(52714979-52715016)
chr1 (699-739)||(1790507-1790547)
chr1 (698-738)||(17167847-17167887)
chr1 (698-738)||(19442504-19442544)
chr1 (699-739)||(37588707-37588747)
chr1 (695-738)||(20288373-20288416)
chr1 (697-748)||(25130700-25130751)
chr1 (700-739)||(35136844-35136883)
chr1 (700-739)||(36577444-36577483)
chr1 (700-739)||(44789175-44789214)
chr1 (700-738)||(4470347-4470385)
chr1 (699-737)||(8200086-8200124)
chr1 (699-737)||(9011644-9011682)
chr1 (703-745)||(16234320-16234362)
chr1 (699-737)||(27687542-27687580)
chr1 (697-739)||(30467558-30467600)
chr1 (701-739)||(30658880-30658918)
chr1 (699-737)||(33358181-33358219)
chr1 (698-736)||(34254386-34254424)
chr1 (696-738)||(34941953-34941995)
chr1 (699-741)||(35883637-35883679)
chr1 (700-738)||(40238438-40238476)
chr1 (699-737)||(40596077-40596115)
chr1 (699-737)||(42256459-42256497)
chr1 (700-738)||(46947981-46948019)
chr1 (699-737)||(48220166-48220204)
chr1 (698-736)||(48624882-48624920)
chr1 (698-740)||(49425736-49425778)
chr1 (697-739)||(49645359-49645401)
chr1 (696-738)||(50035570-50035612)
chr1 (700-738)||(50528090-50528128)
chr1 (698-739)||(7128116-7128157)
chr1 (699-748)||(7227444-7227493)
chr1 (698-739)||(8411750-8411791)
chr1 (699-748)||(19651409-19651458)
chr1 (699-748)||(25302666-25302715)
chr1 (698-739)||(26585911-26585952)
chr1 (699-748)||(27352629-27352678)
chr1 (700-749)||(29362714-29362763)
chr1 (700-749)||(31184281-31184330)
chr1 (697-738)||(34040533-34040574)
chr1 (703-748)||(34395942-34395987)
chr1 (699-736)||(40612113-40612150)
chr1 (700-737)||(41507217-41507254)
chr1 (697-738)||(43893254-43893295)
chr1 (696-733)||(50882136-50882173)
chr1 (697-738)||(51168801-51168842)
[»] chr4 (58 HSPs)
chr4 (700-748)||(19720664-19720712)
chr4 (696-748)||(34259811-34259863)
chr4 (699-738)||(9162065-9162104)
chr4 (697-748)||(15638158-15638209)
chr4 (696-739)||(51359822-51359865)
chr4 (699-749)||(6953410-6953460)
chr4 (699-749)||(41609701-41609751)
chr4 (699-748)||(3222988-3223037)
chr4 (700-749)||(23220335-23220384)
chr4 (699-748)||(44368225-44368274)
chr4 (698-739)||(45521611-45521652)
chr4 (703-748)||(47519743-47519788)
chr4 (700-748)||(9032780-9032828)
chr4 (699-739)||(13086021-13086061)
chr4 (699-739)||(22819648-22819688)
chr4 (698-746)||(24088589-24088637)
chr4 (699-739)||(37514164-37514204)
chr4 (700-744)||(42178077-42178121)
chr4 (700-739)||(3078940-3078979)
chr4 (699-738)||(14010151-14010190)
chr4 (699-738)||(23094375-23094414)
chr4 (699-738)||(31221412-31221451)
chr4 (698-737)||(31657656-31657695)
chr4 (699-738)||(38864769-38864808)
chr4 (699-738)||(46566928-46566967)
chr4 (700-739)||(47099022-47099061)
chr4 (700-739)||(51887663-51887702)
chr4 (698-749)||(55268023-55268074)
chr4 (700-738)||(169535-169573)
chr4 (701-739)||(2401611-2401649)
chr4 (699-737)||(4949517-4949555)
chr4 (699-749)||(11012140-11012190)
chr4 (698-748)||(13267501-13267551)
chr4 (697-739)||(14527641-14527683)
chr4 (700-738)||(23347775-23347813)
chr4 (700-738)||(24772671-24772709)
chr4 (699-737)||(28657463-28657501)
chr4 (697-739)||(30079843-30079885)
chr4 (696-738)||(35017149-35017191)
chr4 (700-738)||(39010170-39010208)
chr4 (697-739)||(39345012-39345054)
chr4 (699-737)||(41262652-41262690)
chr4 (699-737)||(43769722-43769760)
chr4 (698-748)||(47014937-47014987)
chr4 (693-739)||(51377325-51377371)
chr4 (700-738)||(52392258-52392296)
chr4 (699-737)||(54036552-54036590)
chr4 (698-739)||(1796364-1796405)
chr4 (699-748)||(5208350-5208399)
chr4 (699-748)||(8026776-8026825)
chr4 (699-748)||(8455860-8455909)
chr4 (700-737)||(12387688-12387725)
chr4 (703-748)||(12694451-12694496)
chr4 (700-737)||(17683236-17683273)
chr4 (699-748)||(24235319-24235368)
chr4 (700-737)||(32365690-32365727)
chr4 (694-739)||(41495007-41495052)
chr4 (698-739)||(46406006-46406047)
[»] chr3 (54 HSPs)
chr3 (700-748)||(2482697-2482745)
chr3 (699-737)||(1765403-1765441)
chr3 (699-749)||(47773997-47774047)
chr3 (700-739)||(29525233-29525272)
chr3 (698-740)||(21306023-21306065)
chr3 (697-739)||(30909026-30909068)
chr3 (698-744)||(44910695-44910741)
chr3 (699-748)||(7237-7286)
chr3 (699-736)||(26672411-26672448)
chr3 (699-748)||(27936963-27937012)
chr3 (698-739)||(34021495-34021536)
chr3 (699-744)||(35074117-35074162)
chr3 (689-738)||(35376584-35376633)
chr3 (698-739)||(50207002-50207043)
chr3 (700-748)||(11327108-11327156)
chr3 (698-738)||(24537217-24537257)
chr3 (699-739)||(48405409-48405449)
chr3 (693-749)||(50652381-50652437)
chr3 (699-739)||(52454126-52454166)
chr3 (700-739)||(1402650-1402689)
chr3 (697-736)||(3958053-3958092)
chr3 (700-739)||(24482995-24483034)
chr3 (694-741)||(31143264-31143311)
chr3 (699-738)||(43169775-43169814)
chr3 (699-738)||(43333703-43333742)
chr3 (698-737)||(47683799-47683838)
chr3 (694-737)||(49196690-49196733)
chr3 (700-738)||(462434-462472)
chr3 (699-737)||(3281738-3281776)
chr3 (699-748)||(6999168-6999218)
chr3 (698-736)||(7294135-7294173)
chr3 (699-737)||(8254026-8254064)
chr3 (700-738)||(30567993-30568031)
chr3 (698-748)||(41717261-41717311)
chr3 (699-737)||(46094422-46094460)
chr3 (701-739)||(47101523-47101561)
chr3 (698-740)||(47683933-47683975)
chr3 (699-737)||(49761318-49761356)
chr3 (698-739)||(19150351-19150392)
chr3 (699-736)||(21196123-21196160)
chr3 (699-748)||(27162492-27162541)
chr3 (701-738)||(31206884-31206921)
chr3 (699-748)||(32931941-32931990)
chr3 (699-748)||(36818955-36819004)
chr3 (697-738)||(36869870-36869911)
chr3 (700-741)||(37710404-37710445)
chr3 (700-741)||(39284697-39284738)
chr3 (698-739)||(42683825-42683866)
chr3 (698-739)||(44677516-44677557)
chr3 (699-748)||(44855250-44855299)
chr3 (700-741)||(46574150-46574190)
chr3 (696-733)||(50146484-50146521)
chr3 (699-748)||(53473609-53473658)
chr3 (699-748)||(53932414-53932463)
[»] scaffold0003 (1 HSPs)
scaffold0003 (697-748)||(337115-337166)
[»] chr8 (31 HSPs)
chr8 (697-739)||(36064027-36064069)
chr8 (689-737)||(42569751-42569799)
chr8 (698-739)||(3946238-3946279)
chr8 (701-738)||(6806909-6806946)
chr8 (699-736)||(11223894-11223931)
chr8 (696-748)||(7279978-7280030)
chr8 (698-738)||(17775462-17775502)
chr8 (700-748)||(38844813-38844861)
chr8 (698-738)||(42443102-42443142)
chr8 (700-739)||(7592849-7592888)
chr8 (700-739)||(14707376-14707415)
chr8 (700-739)||(16872188-16872227)
chr8 (700-739)||(29991412-29991451)
chr8 (700-739)||(34718115-34718154)
chr8 (701-748)||(39719271-39719318)
chr8 (689-748)||(44380637-44380696)
chr8 (703-737)||(14710916-14710950)
chr8 (697-739)||(16966782-16966824)
chr8 (699-737)||(30439528-30439566)
chr8 (699-733)||(34473948-34473982)
chr8 (700-738)||(39453440-39453478)
chr8 (699-737)||(40413372-40413410)
chr8 (699-737)||(41541868-41541906)
chr8 (697-739)||(42620009-42620051)
chr8 (699-737)||(45081079-45081117)
chr8 (698-739)||(9549231-9549272)
chr8 (700-737)||(13884194-13884231)
chr8 (700-737)||(35356190-35356227)
chr8 (699-744)||(38128803-38128848)
chr8 (699-748)||(40380280-40380329)
chr8 (699-748)||(41273514-41273563)
[»] chr7 (37 HSPs)
chr7 (698-748)||(27164860-27164910)
chr7 (699-739)||(16980296-16980336)
chr7 (693-737)||(25887587-25887631)
chr7 (700-748)||(29162302-29162350)
chr7 (698-738)||(33180743-33180783)
chr7 (694-738)||(41080120-41080164)
chr7 (697-748)||(13437195-13437246)
chr7 (700-738)||(42663084-42663122)
chr7 (701-739)||(46812937-46812975)
chr7 (697-738)||(19426577-19426618)
chr7 (698-739)||(37899321-37899362)
chr7 (699-739)||(13729725-13729765)
chr7 (692-748)||(30864440-30864496)
chr7 (700-748)||(33050183-33050231)
chr7 (698-737)||(3293139-3293178)
chr7 (699-738)||(4971289-4971328)
chr7 (700-739)||(21023149-21023188)
chr7 (699-738)||(24700120-24700159)
chr7 (699-737)||(28862104-28862142)
chr7 (699-749)||(37392042-37392092)
chr7 (699-737)||(37856188-37856226)
chr7 (699-745)||(41227066-41227112)
chr7 (699-737)||(41985123-41985161)
chr7 (699-749)||(44187690-44187740)
chr7 (699-736)||(156017-156054)
chr7 (704-737)||(2346951-2346984)
chr7 (700-737)||(2347093-2347130)
chr7 (699-748)||(3040411-3040460)
chr7 (699-748)||(12141898-12141947)
chr7 (699-740)||(27070699-27070740)
chr7 (699-740)||(27207573-27207614)
chr7 (698-739)||(28036742-28036783)
chr7 (700-737)||(31711959-31711996)
chr7 (698-739)||(37899245-37899286)
chr7 (700-749)||(40717258-40717307)
chr7 (694-739)||(41893909-41893954)
chr7 (699-748)||(44511138-44511187)
[»] chr5 (30 HSPs)
chr5 (700-741)||(27440479-27440520)
chr5 (695-739)||(8920073-8920117)
chr5 (697-741)||(22402656-22402700)
chr5 (700-746)||(9933500-9933546)
chr5 (703-749)||(10426467-10426513)
chr5 (695-749)||(15918012-15918066)
chr5 (697-739)||(30640787-30640829)
chr5 (699-748)||(14914371-14914420)
chr5 (700-749)||(17063865-17063914)
chr5 (699-736)||(26660446-26660483)
chr5 (699-736)||(26932038-26932075)
chr5 (700-748)||(42699057-42699105)
chr5 (700-739)||(3109619-3109658)
chr5 (700-739)||(21064258-21064297)
chr5 (697-744)||(26685523-26685570)
chr5 (697-744)||(26955254-26955301)
chr5 (689-739)||(4088433-4088482)
chr5 (698-748)||(9594476-9594526)
chr5 (698-736)||(14324003-14324041)
chr5 (684-738)||(19983825-19983879)
chr5 (700-741)||(2629818-2629859)
chr5 (698-739)||(2652653-2652694)
chr5 (699-736)||(11768025-11768062)
chr5 (700-737)||(16143390-16143427)
chr5 (703-748)||(18449264-18449309)
chr5 (698-739)||(18695316-18695357)
chr5 (699-740)||(28811428-28811469)
chr5 (699-748)||(32634707-32634756)
chr5 (700-749)||(41460116-41460165)
chr5 (336-381)||(43368752-43368797)
[»] chr6 (21 HSPs)
chr6 (700-739)||(754470-754509)
chr6 (699-738)||(15722536-15722575)
chr6 (699-748)||(3339522-3339571)
chr6 (699-748)||(27334857-27334906)
chr6 (699-748)||(27395597-27395646)
chr6 (697-738)||(30714677-30714718)
chr6 (700-748)||(12500050-12500098)
chr6 (700-748)||(12507379-12507427)
chr6 (700-748)||(12508803-12508851)
chr6 (699-739)||(15318220-15318260)
chr6 (698-738)||(30906696-30906736)
chr6 (699-739)||(33421759-33421799)
chr6 (696-739)||(18141333-18141376)
chr6 (692-739)||(30152562-30152609)
chr6 (699-737)||(3180026-3180064)
chr6 (699-737)||(28748123-28748161)
chr6 (699-737)||(30945822-30945860)
chr6 (700-737)||(7611495-7611532)
chr6 (699-748)||(15666796-15666845)
chr6 (699-748)||(17417258-17417307)
chr6 (698-739)||(20822900-20822941)
[»] scaffold0115 (1 HSPs)
scaffold0115 (700-749)||(35520-35569)
[»] scaffold0321 (1 HSPs)
scaffold0321 (695-739)||(19631-19675)
[»] scaffold0221 (1 HSPs)
scaffold0221 (699-739)||(8213-8253)
[»] scaffold0034 (1 HSPs)
scaffold0034 (699-738)||(22577-22616)
[»] scaffold1625 (1 HSPs)
scaffold1625 (699-741)||(811-853)
[»] scaffold0662 (1 HSPs)
scaffold0662 (698-748)||(1076-1126)
[»] scaffold0100 (1 HSPs)
scaffold0100 (699-737)||(44785-44823)
[»] scaffold0095 (1 HSPs)
scaffold0095 (700-738)||(16262-16300)
[»] scaffold0002 (1 HSPs)
scaffold0002 (700-738)||(6427-6465)
[»] scaffold0136 (1 HSPs)
scaffold0136 (698-739)||(38423-38464)


Alignment Details
Target: chr2 (Bit Score: 342; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 214 - 625
Target Start/End: Original strand, 39132799 - 39133216
Alignment:
Q  214 caccatcatcatcataaaaccctctaggaacagccggacc-----tttggatagataaatgaagtgacaatagtcattggaaattcacacatatatgcag 308  Q
    ||||||||||||||||||||||||||||||||||||||||     ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  39132799 caccatcatcatcataaaaccctctaggaacagccggacccttttttttgatagataaatgaagtgacaataatcattggaaattcacacatacatgcag 39132898  T
Q  309 tcgaggtttaaacc-cgatcacagtgtgcgacctaacaatttcagtatttttatcaattaagttaggatttgtggacgcttaatatttcttattagtagg 407  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  39132899 tcgaggtttaaacctcgatcacagtgtccgatctaacaatttcagtatttttattaattaagttaagatttgtggacgcttaatatttcttattaatagg 39132998  T
Q  408 gagttgaacaaatgtgtgaaccatctaaccaaatgtataacatctttaagtataatcgaattttgaagtaaaaaatcatcaatctactaaaaaagatatg 507  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39132999 gagttgaacaaatgtgcgaaccatctaaccaaatgtataatatctttaagtataatcgaattttggagtaaaaaatcatcaatctactaaaaaagatatg 39133098  T
Q  508 gtactccacaaatagcctttcaaaattggcaattgttctatcaaagtaccaattgacaatttgatcaacataaccaaacgaaataaatttagacaaaaca 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39133099 gtactccacaaatagcctttcaaaattggcaattgttctatcaaagtaccaattgacaatttgatcaacataaccaaacgaaataaatttagacaaaaca 39133198  T
Q  608 atatgtactagaagtata 625  Q
     |||||||||||||||||    
T  39133199 gtatgtactagaagtata 39133216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 39132574 - 39132714
Alignment:
Q  8 caaatgaattagaattaacatgattctctctattcctcctctttgttgagatattgtagtgtttgtttagatgctattccttttttgttgatcctttttg 107  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39132574 caaataaattagaattaacaggattctctctattcctcctctttgttgagatattttagtgtttgtttagatgctattccttttttgttgatcctttttg 39132673  T
Q  108 cgtaggttaagcatcatgtatacaaacgtaattctcctctc 148  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  39132674 cgtaggttaagcatcatgtatataaacgtaattctcctctc 39132714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 14954671 - 14954622
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  14954671 agagaaatgatatttgtacatacattttgtgacaacttttgaacaacttt 14954622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 737
Target Start/End: Complemental strand, 22353238 - 22353198
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  22353238 atagagaaatgatatttgtacaatcattttgtgacaacttt 22353198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 748
Target Start/End: Complemental strand, 36909918 - 36909866
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  36909918 tatagagaaatgatatttgtacaaccattttgtgacaacttttggacaacttt 36909866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 697 - 739
Target Start/End: Complemental strand, 35589461 - 35589419
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  35589461 atagagaaatgatatttgaacatccattttgtgacaacttttg 35589419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 697 - 739
Target Start/End: Complemental strand, 39449191 - 39449149
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  39449191 atagagaaatgatatttgaacatccattttgtgacaacttttg 39449149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 27307303 - 27307254
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||| |||||||||||||||| | ||||||    
T  27307303 agagaaatgatatttgtacaatcaatttgtgacaacttttgtacaacttt 27307254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 701 - 737
Target Start/End: Original strand, 1836014 - 1836050
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1836014 agaaatgatatttgaacattcattttgtgacaacttt 1836050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 3196158 - 3196110
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||| ||| |||||||||||||||| | ||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaacttt 3196110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Complemental strand, 23345062 - 23345022
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  23345062 tagagaaatgatatttgtacattcattttataacaactttt 23345022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 36802895 - 36802935
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  36802895 agagaaatgatatttgaacatccattttgtgacaacttttg 36802935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 697 - 741
Target Start/End: Complemental strand, 43820815 - 43820771
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||    
T  43820815 atagagaaatgatatttgtacaatcatttttttacaacttttgaa 43820771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 44254598 - 44254638
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  44254598 agagaaatgatatttgaacattcattctgtgacaacttttg 44254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 737
Target Start/End: Complemental strand, 285531 - 285492
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  285531 tagagaaatgatatttgtacattcattttggaacaacttt 285492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 2013357 - 2013318
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  2013357 agagaaatgatatttgtacattcattttatgacaattttt 2013318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 738
Target Start/End: Complemental strand, 4299594 - 4299559
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||| |||||||||||||||||||||||    
T  4299594 aaatgatatttgaacattcattttgtgacaactttt 4299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 748
Target Start/End: Complemental strand, 6742476 - 6742433
Alignment:
Q  705 atgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||| | |||||||||||||||||||||| ||||||    
T  6742476 atgatatttgtaaaatcattttgtgacaacttttgaacaacttt 6742433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 30977888 - 30977927
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  30977888 agagaaatgatatttgaacatccattttgtgacaactttt 30977927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 691 - 737
Target Start/End: Complemental strand, 2971883 - 2971837
Alignment:
Q  691 taaattatagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||| ||||||| |||||||| |||| |||||||||||||||||    
T  2971883 taaattaaagagaaaagatatttgaacatccattttgtgacaacttt 2971837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 3012906 - 3012868
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  3012906 agagaaatgatatttgaacatccattttgtgacaacttt 3012868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 6646834 - 6646872
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  6646834 agagaaatgatatttgaacatccattttgtgacaacttt 6646872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 691 - 737
Target Start/End: Original strand, 15141464 - 15141510
Alignment:
Q  691 taaattatagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||| ||||||||||||||||||||||  ||||| ||||||||||    
T  15141464 taaattttagagaaatgatatttgtacatctattttatgacaacttt 15141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 745
Target Start/End: Original strand, 18508077 - 18508123
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataac 745  Q
    ||||||||||||||||||||| |||||| ||| |||||||| |||||    
T  18508077 agagaaatgatatttgtacatccattttatgataacttttgtataac 18508123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 21805857 - 21805819
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  21805857 gagaaatgatatttgtacaatcatttagtgacaactttt 21805819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 29795446 - 29795484
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  29795446 agagaaatgatatttgtacaaccattttgtgacaacttt 29795484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 748
Target Start/End: Original strand, 36383460 - 36383510
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||   |||||||||||||||||| | ||||||    
T  36383460 tagagaaatgatatttgtacaaagattttgtgacaacttttgtacaacttt 36383510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 37085282 - 37085244
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  37085282 agagaaatgatatttgtacattcaatttgtaacaacttt 37085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 39492422 - 39492341
Alignment:
Q  21 attaacatgattctctctattcctcctctttgttgagatattgtagtgtttgtttagatgctattccttttttgttgatcctttt 105  Q
    ||||||| | |||||||||||||||   |||||||||||| |||||| |||||||||||  ||||||  ||| |||||| |||||    
T  39492422 attaacagggttctctctattcctc---tttgttgagatagtgtagtatttgtttagatattattcccctttagttgattctttt 39492341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 3299177 - 3299128
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  |||||| ||||||||||| || ||||||    
T  3299177 agagaaatgatatttgtacaaccattttatgacaacttttaaacaacttt 3299128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 5067718 - 5067669
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||  | |||||||||||||||  ||||||||    
T  5067718 agagaaatgatatttgtacatctactttgtgacaactttttgataacttt 5067669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 385
Target Start/End: Original strand, 9945018 - 9945051
Alignment:
Q  352 gtatttttatcaattaagttaggatttgtggacg 385  Q
    ||||||||||| ||||||||||||||||||||||    
T  9945018 gtatttttatccattaagttaggatttgtggacg 9945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 738
Target Start/End: Original strand, 10687938 - 10687979
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||||  || |||||||||||||||    
T  10687938 atagagaaatgatatttgtacaaacaatttgtgacaactttt 10687979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 736
Target Start/End: Complemental strand, 11229393 - 11229356
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||| || |||||||||||||    
T  11229393 agagaaatgatatttgtacatccactttgtgacaactt 11229356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 741
Target Start/End: Complemental strand, 13454030 - 13453985
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  13454030 tatagagaaatgatatctgtacaatcactttttgacaacttttgaa 13453985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 739
Target Start/End: Complemental strand, 14233788 - 14233751
Alignment:
Q  702 gaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  14233788 gaaatgatatttgaacatccattttgtgacaacttttg 14233751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Complemental strand, 15124007 - 15123966
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  15124007 gagaaatgatatttgtacaaccattttttgacaacttttgaa 15123966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 29168724 - 29168773
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  |||||| |||||||||||| | ||||||    
T  29168724 agagaaatgatatttgtacaaccattttttgacaacttttgcacaacttt 29168773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 29871424 - 29871375
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| | | ||| |||||||||||||| ||||||    
T  29871424 agagaaatgatatttgtacaattagtttatgacaacttttgaacaacttt 29871375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Original strand, 30416360 - 30416401
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    ||||||||||||||||||| ||||||| |||||| |||||||    
T  30416360 gagaaatgatatttgtacaatcattttttgacaatttttgaa 30416401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 43791875 - 43791834
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||| ||||||||||||||||| |||||| ||||||||||||    
T  43791875 tagataaatgatatttgtacatccattttatgacaacttttg 43791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 11097956 - 11097907
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  11097956 agagaaatgatatttgtacatccattttgtgacaacttttgaacaacttt 11097907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 2855033 - 2854992
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  2855033 tagagaaatgatatttgtacattcattttatgacaacttttg 2854992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 7078572 - 7078523
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  7078572 agagaaatgatatttgtacatctattttgtgacaacttttgaacaacttt 7078523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 16836175 - 16836137
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttt 16836137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 701 - 739
Target Start/End: Complemental strand, 33054158 - 33054120
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  33054158 agaaatgatatttgaacattcattttgtgacaacttttg 33054120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 691 - 737
Target Start/End: Complemental strand, 45065970 - 45065924
Alignment:
Q  691 taaattatagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||    
T  45065970 taaattataaagaaatgatatttgaacatccattttgtgacaacttt 45065924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 50797790 - 50797828
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaacttt 50797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 14429398 - 14429443
Alignment:
Q  339 cctaacaatttcagtatttttatcaattaagttaggatttgtggac 384  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  14429398 cctaacaatttcaatatttttgtcaattaagctaggatttgtggac 14429443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 700 - 737
Target Start/End: Original strand, 18336158 - 18336195
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcattttgtgacaacttt 18336195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 26547233 - 26547282
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||  |||||||||||| ||||||| ||||||    
T  26547233 agagaaatgatatttgtacatatattttgtgacaatttttgaacaacttt 26547282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 739
Target Start/End: Original strand, 32873335 - 32873380
Alignment:
Q  694 attatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||    
T  32873335 attatagagaaatgatatttgtacatccattttatgataacttttg 32873380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 35846391 - 35846342
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||| || || ||||||||||||||| |||||||||    
T  35846391 agagaaatgatatttgtatatccactttgtgacaactttttaataacttt 35846342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 701 - 738
Target Start/End: Original strand, 52714979 - 52715016
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||| |||||||||||||||||||    
T  52714979 agaaatgatatttgtacaatcattttgtgacaactttt 52715016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 1790507 - 1790547
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  1790507 agagaaatgatatttgaacattcatttggtgacaacttttg 1790547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Original strand, 17167847 - 17167887
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  17167847 tagagaaatgatatttgtacatccattttatgacaactttt 17167887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Original strand, 19442504 - 19442544
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  19442504 tagagaaatgatatttgaacaatcattttgtgacaactttt 19442544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Complemental strand, 37588747 - 37588707
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  37588747 agagaaatgatatttgaacatttattttgtgacaacttttg 37588707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 695 - 738
Target Start/End: Complemental strand, 20288416 - 20288373
Alignment:
Q  695 ttatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||| |||||||||||||||||||| || |||||||||||||||    
T  20288416 ttattgagaaatgatatttgtacatccaatttgtgacaactttt 20288373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 748
Target Start/End: Original strand, 25130700 - 25130751
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||| |||||||||||||||| ||| |||||||||||||||| | ||||||    
T  25130700 atagaaaaatgatatttgtacaatcaatttgtgacaacttttgtacaacttt 25130751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 35136844 - 35136883
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  35136844 gagaaatgatatttgaacatccattttgtgacaacttttg 35136883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 36577483 - 36577444
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  36577483 gagaaatgatatttgaacatccattttgtgacaacttttg 36577444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 44789214 - 44789175
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  44789214 gagaaatgatatttgaacatccattttgtgacaacttttg 44789175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 4470385 - 4470347
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  4470385 gagaaatgatatttgaacatccattttgtgacaactttt 4470347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 8200086 - 8200124
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  8200086 agagaaatgatatttgaacatccattttgtgacaacttt 8200124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 9011644 - 9011682
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9011644 agagaaatgatatttgtacaaccattttgtgacaacttt 9011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 703 - 745
Target Start/End: Complemental strand, 16234362 - 16234320
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttttgaataac 745  Q
    ||||||||||||||||| |||||| |||||||||||| |||||    
T  16234362 aaatgatatttgtacatccattttatgacaacttttgtataac 16234320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 27687580 - 27687542
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  27687580 agagaaatgatatttgtacaaccattttgtgacaacttt 27687542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Complemental strand, 30467600 - 30467558
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||    
T  30467600 atagagaaatgatatttgaacagtcattttttgacaacttttg 30467558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 701 - 739
Target Start/End: Complemental strand, 30658918 - 30658880
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  30658918 agaaatgatatttgaacatccattttgtgacaacttttg 30658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 33358219 - 33358181
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  33358219 agagaaatgatatttgaacatccattttgtgacaacttt 33358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 736
Target Start/End: Complemental strand, 34254424 - 34254386
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  34254424 tagagaaatgatatttgaacattcattttatgacaactt 34254386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 738
Target Start/End: Complemental strand, 34941995 - 34941953
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||||  |||||||||||||| ||||    
T  34941995 tatagagaaatgatatttgtactatcattttgtgacaattttt 34941953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 741
Target Start/End: Complemental strand, 35883679 - 35883637
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||||||||||||||||||| | ||||| ||||||||||||||    
T  35883679 agagaaatgatatttgtacaattattttttgacaacttttgaa 35883637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 40238438 - 40238476
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  40238438 gagaaatgatatttgtacaatcattttttgacaactttt 40238476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 40596115 - 40596077
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaacttt 40596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 42256459 - 42256497
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  42256459 agagaaatgatatttgtacaaccattttgtgacaacttt 42256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 46947981 - 46948019
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  46947981 gagaaatgatatttgtacatccattttatgacaactttt 46948019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 48220204 - 48220166
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  48220204 agagaaatgatatttgaacatccattttgtgacaacttt 48220166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 736
Target Start/End: Original strand, 48624882 - 48624920
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  48624882 tagagaaatgatatttgaacatccattttgtgacaactt 48624920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 740
Target Start/End: Original strand, 49425736 - 49425778
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttga 740  Q
    |||||||||||||||||||||  || |||||||||||||||||    
T  49425736 tagagaaatgatatttgtacaaccactttgtgacaacttttga 49425778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 49645359 - 49645401
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||| | ||||||| ||||||||||||    
T  49645359 atagagaaatgatatttgtataatcattttatgacaacttttg 49645401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 738
Target Start/End: Complemental strand, 50035612 - 50035570
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  50035612 tatagggaaatgatatttgtacaaccattttgtgacaactttt 50035570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 50528128 - 50528090
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  50528128 gagaaatgatatttgtacaatcaatttgtgacaactttt 50528090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 7128116 - 7128157
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| ||||| |||||||||||||    
T  7128116 tagagaaatgatatttgaacatccatttagtgacaacttttg 7128157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 7227493 - 7227444
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||| | ||| |||||||||| ||||||||| ||||||    
T  7227493 agagaaatgatatttgaatattaattttgtgacgacttttgaacaacttt 7227444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 8411791 - 8411750
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| ||||| |||||||||||||    
T  8411791 tagagaaatgatatttgaacatccatttagtgacaacttttg 8411750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 19651409 - 19651458
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||  ||||  ||||||||||||||||||| ||||||||    
T  19651409 agagaaatgatattcctacaaccattttgtgacaacttttgtataacttt 19651458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 25302715 - 25302666
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  || ||||||||||| ||| |||||||||    
T  25302715 agagaaatgatatttgtacaaccactttgtgacaaccttttaataacttt 25302666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 26585952 - 26585911
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| ||||| |||||||||||||    
T  26585952 tagagaaatgatatttgaacatccatttagtgacaacttttg 26585911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 27352629 - 27352678
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  |||||||||| |||||||| | ||||||    
T  27352629 agagaaatgatatttgtacaaccattttgtgataacttttggacaacttt 27352678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 749
Target Start/End: Complemental strand, 29362763 - 29362714
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||| ||| ||| |||||||||||| | |||||||    
T  29362763 gagaaatgatatttgtacaatcaatttatgacaacttttgtacaacttta 29362714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 749
Target Start/End: Original strand, 31184281 - 31184330
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||||||||||||||||||  |||||| ||||||||||| || |||||||    
T  31184281 gagaaatgatatttgtacaaccattttatgacaactttttaacaacttta 31184330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 738
Target Start/End: Complemental strand, 34040574 - 34040533
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||| |||| |||||||||| |||||||    
T  34040574 atagagaaatgatatttgaacatccattttgtgataactttt 34040533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 748
Target Start/End: Complemental strand, 34395987 - 34395942
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||  ||||| |||||||||||||| ||||||    
T  34395987 aaatgatatttgtacatctattttatgacaacttttgaacaacttt 34395942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 736
Target Start/End: Original strand, 40612113 - 40612150
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  40612113 agagaaatgatatttgtacaaccattttgtgacaactt 40612150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 41507254 - 41507217
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||  |||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaacttt 41507217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 738
Target Start/End: Original strand, 43893254 - 43893295
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||| |||| |||||||| |||||||||    
T  43893254 atagagaaatgatatttgaacatccattttgtcacaactttt 43893295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 733
Target Start/End: Complemental strand, 50882173 - 50882136
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaa 733  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  50882173 tataaagaaatgatatttgaacattcattttgtgacaa 50882136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 738
Target Start/End: Complemental strand, 51168842 - 51168801
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||| ||||||| ||||||||||| |||||||    
T  51168842 atagagaaatgatacttgtacaatcattttgtgataactttt 51168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 19720712 - 19720664
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  19720712 gagaaatgatatttgcacatccattttgtgacaacttttgaataacttt 19720664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 748
Target Start/End: Original strand, 34259811 - 34259863
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||| ||||||    
T  34259811 tatagagaaatgatatttgtacaaccattttgtgacaactgttgaacaacttt 34259863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 9162065 - 9162104
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9162065 agagaaatgatatttgtacaatcattttgtgacaactttt 9162104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 697 - 748
Target Start/End: Original strand, 15638158 - 15638209
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||| ||||||| |||||||||||| | ||||||    
T  15638158 atagagaaatgatatttgtacaatcattttttgacaacttttgcacaacttt 15638209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 696 - 739
Target Start/End: Complemental strand, 51359865 - 51359822
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  51359865 tatagagaaatgatatttgtacaaccattttgtgacaacttttg 51359822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 749
Target Start/End: Complemental strand, 6953460 - 6953410
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||||| || ||||||||||||||| || |||||||    
T  6953460 agagaaatgatatttgtacatccactttgtgacaactttttaacaacttta 6953410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 749
Target Start/End: Complemental strand, 41609751 - 41609701
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||||| |||||| |||||||||||| | |||||||    
T  41609751 agagaaatgatatttgtacatccattttatgacaacttttgtacaacttta 41609701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 3222988 - 3223037
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||| |||||||||||||||| | ||||||    
T  3222988 agagaaatgatatttgtacaatcaatttgtgacaacttttgtacaacttt 3223037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 700 - 749
Target Start/End: Original strand, 23220335 - 23220384
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||||||||||||||||||  |||||| ||||||||||| ||||||||||    
T  23220335 gagaaatgatatttgtacaaccattttttgacaacttttaaataacttta 23220384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 44368274 - 44368225
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||| |||||||||||||||| | ||||||    
T  44368274 agagaaatgatatttgtacaatcaatttgtgacaacttttgtacaacttt 44368225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 45521652 - 45521611
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  45521652 tagagaaatgatatttgtacatccattttatgacaacttttg 45521611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 748
Target Start/End: Complemental strand, 47519788 - 47519743
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  47519788 aaatgatatttgtacatccattttgtaacaacttttgaacaacttt 47519743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Original strand, 9032780 - 9032828
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||| ||| |||||||||||||||| | ||||||    
T  9032780 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaacttt 9032828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 13086021 - 13086061
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  13086021 agagaaatgatatttgatcattcattttgtgacaacttttg 13086061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 22819648 - 22819688
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  22819648 agagaaatgatatttgaacatccattttgtgacaacttttg 22819688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 746
Target Start/End: Complemental strand, 24088637 - 24088589
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataact 746  Q
    |||||||||||||||||||||  |||||| |||||||||||||| ||||    
T  24088637 tagagaaatgatatttgtacaaccattttatgacaacttttgaacaact 24088589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Complemental strand, 37514204 - 37514164
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  37514204 agagaaatgatatttgtacatccattttgtaacaacttttg 37514164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 744
Target Start/End: Complemental strand, 42178121 - 42178077
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataa 744  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||    
T  42178121 gagaaatgatatttgtacaatcattatgtgacaatttttgaataa 42178077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 3078979 - 3078940
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  3078979 gagaaatgatatttgtacaatcattttgtaacaacttttg 3078940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 14010190 - 14010151
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  14010190 agagaaatgatatttgaacatccattttgtgacaactttt 14010151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 23094375 - 23094414
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  23094375 agagaaatgatatttgtacaatcattttgtgataactttt 23094414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 31221412 - 31221451
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  31221412 agagaaatgatatttgtacaatcaatttgtgacaactttt 31221451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 737
Target Start/End: Original strand, 31657656 - 31657695
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  31657656 tagagaaatgatatttgaacatccattttgtgacaacttt 31657695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 38864808 - 38864769
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  38864808 agagaaatgatatttgtacaattattttgtgacaactttt 38864769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 46566928 - 46566967
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  46566928 agagaaatgatatttgtacatccactttgtgacaactttt 46566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 47099022 - 47099061
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  47099022 gagaaatgatatttgaatattcattttgtgacaacttttg 47099061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 51887663 - 51887702
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  51887663 gagaaatgatatttgaacatccattttgtgacaacttttg 51887702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 749
Target Start/End: Complemental strand, 55268074 - 55268023
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||||||||||||||||||||  || |||||||||||||||| | |||||||    
T  55268074 tagagaaatgatatttgtacaaccaatttgtgacaacttttgtacaacttta 55268023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 169573 - 169535
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactttt 169535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 701 - 739
Target Start/End: Original strand, 2401611 - 2401649
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  2401611 agaaatgatatttgaacatccattttgtgacaacttttg 2401649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 4949517 - 4949555
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  4949517 agagaaatgatatttgaacattcatttggtgacaacttt 4949555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 749
Target Start/End: Original strand, 11012140 - 11012190
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||||  |||||| ||||||||||| || |||||||    
T  11012140 agagaaatgatatttgtacaaccattttatgacaactttttaacaacttta 11012190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 748
Target Start/End: Complemental strand, 13267551 - 13267501
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||  ||||||||||||| ||||| | ||||||    
T  13267551 tagagaaatgatatttgtacaaccattttgtgacaaattttggaaaacttt 13267501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 14527641 - 14527683
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||| |||||||||||| |||| |||||||||||||||||||    
T  14527641 atagaaaaatgatatttgaacatccattttgtgacaacttttg 14527683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 23347775 - 23347813
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| || |||||||||||||||    
T  23347775 gagaaatgatatttgtacatccactttgtgacaactttt 23347813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 24772671 - 24772709
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  24772671 gagaaatgatatttgtacatccattttatgacaactttt 24772709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 28657501 - 28657463
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  28657501 agagaaatgatatttgaacatccattttgtgacaacttt 28657463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 30079843 - 30079885
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||| ||||| |||||||||||||    
T  30079843 atagagaaatgatatttgaacatccatttagtgacaacttttg 30079885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 738
Target Start/End: Original strand, 35017149 - 35017191
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  35017149 tatagagaaatgatatttgtacaactattttgtgacaactttt 35017191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 39010208 - 39010170
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaactttt 39010170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Complemental strand, 39345054 - 39345012
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||| ||||||||||||| |||||    
T  39345054 atagagaaatgatatttgaacatccattttgtgacaatttttg 39345012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 41262690 - 41262652
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  41262690 agagaaatgatatttgtacaattattttgtgacaacttt 41262652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 43769722 - 43769760
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  43769722 agagaaatgatatttgaacatccattttgtgacaacttt 43769760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 748
Target Start/End: Original strand, 47014937 - 47014987
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||   ||||||||||||||||| || ||||||    
T  47014937 tagagaaatgatatttgtacaactattttgtgacaacttttaaacaacttt 47014987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 693 - 739
Target Start/End: Complemental strand, 51377371 - 51377325
Alignment:
Q  693 aattatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||| |||||||||||||||||||||  || ||||||||||||||||    
T  51377371 aattgtagagaaatgatatttgtacaaccaatttgtgacaacttttg 51377325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 52392296 - 52392258
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| || |||||||||||||||    
T  52392296 gagaaatgatatttgtacatccactttgtgacaactttt 52392258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 54036590 - 54036552
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  54036590 agagaaatgatatttgtacaaccattttgtgacaacttt 54036552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 1796364 - 1796405
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||  || ||||||||||||||||    
T  1796364 tagagaaatgatatttgtacaaccaatttgtgacaacttttg 1796405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 5208399 - 5208350
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  5208399 agagaaatgatatttgtacaaccaatttgtgacaacttttgtacaacttt 5208350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 8026825 - 8026776
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||| |||| ||| |||||||||||||||| | ||||||    
T  8026825 agagaaatgatatttatacaatcaatttgtgacaacttttgtacaacttt 8026776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 8455860 - 8455909
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||| ||||||||||   |||||||||||||||||||| ||||||    
T  8455860 agagaaatgttatttgtacaactattttgtgacaacttttgaacaacttt 8455909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 12387725 - 12387688
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  12387725 gagaaatgatatttgtacaatcattttttgacaacttt 12387688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 748
Target Start/End: Complemental strand, 12694496 - 12694451
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||||    
T  12694496 aaatgatatttgtacaaccattttgtgacaactttttgataacttt 12694451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Original strand, 17683236 - 17683273
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  17683236 gagaaatgatatttgaacattcattttatgacaacttt 17683273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 24235319 - 24235368
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||| |||||||||| ||||| | ||||||    
T  24235319 agagaaatgatatttgtacaatcaatttgtgacaatttttgtacaacttt 24235368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 32365727 - 32365690
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||  |||||||||||||||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaacttt 32365690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 739
Target Start/End: Original strand, 41495007 - 41495052
Alignment:
Q  694 attatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||||||   ||| ||||||||||||||    
T  41495007 attatagagaaatgatatttgtacaactattatgtgacaacttttg 41495052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 46406047 - 46406006
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| | |||||||| |||||||||||||    
T  46406047 tagagaaatgatatttgaatattcatttggtgacaacttttg 46406006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 2482745 - 2482697
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  2482745 gagaaatgatatttgtacatccattttgtgacaacttttgaacaacttt 2482697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 1765403 - 1765441
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1765403 agagaaatgatatttgtacattcattttgtgacaacttt 1765441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 749
Target Start/End: Complemental strand, 47774047 - 47773997
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||    
T  47774047 agagaaatgatatttgtacattcattttgtgataacttttagataacttta 47773997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 29525233 - 29525272
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  29525233 gagaaatgatatttgtacattcattttatgacaacttttg 29525272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 698 - 740
Target Start/End: Original strand, 21306023 - 21306065
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttga 740  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  21306023 tagagaaatgatatttgtacagtcattttgcgacaacttttga 21306065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 30909026 - 30909068
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  30909026 atagagaaatgatatttgaacattcatttagtgacaacttttg 30909068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 698 - 744
Target Start/End: Original strand, 44910695 - 44910741
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataa 744  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  44910695 tagagaaatgatatttgtacattcattttatgataacttttgtataa 44910741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 7286 - 7237
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||||||| |||||||||||| | ||||||    
T  7286 agagaaatgatatttgtacaatcattttctgacaacttttggacaacttt 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 736
Target Start/End: Original strand, 26672411 - 26672448
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    |||||||||||||||| |||||||||||||||||||||    
T  26672411 agagaaatgatatttgaacattcattttgtgacaactt 26672448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 27936963 - 27937012
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||| ||||||||| |  ||||||||||||||||||||||||||||    
T  27936963 agagaaataatatttgtagaaccattttgtgacaacttttgaataacttt 27937012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 34021536 - 34021495
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  34021536 tagagaaatgatatttgtacaatcaatttgtgacaacttttg 34021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 744
Target Start/End: Complemental strand, 35074162 - 35074117
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataa 744  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||    
T  35074162 agagaaatgatatttgtacaatcattttgggacaactttttaataa 35074117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 689 - 738
Target Start/End: Complemental strand, 35376633 - 35376584
Alignment:
Q  689 tttaaattatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  35376633 tttaaattaaagagaaatgatatttgtacaaccattttgtgacaattttt 35376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 50207043 - 50207002
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  50207043 tagagaaatgatatttgaacatccattttgtgacaacttttg 50207002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Original strand, 11327108 - 11327156
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaacttttgtacaacttt 11327156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Original strand, 24537217 - 24537257
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  24537217 tagagaaatgatatttgtacatccactttgtgacaactttt 24537257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 48405409 - 48405449
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  48405409 agagaaatgatatttgtacaaccattttgtgacaacttttg 48405449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 693 - 749
Target Start/End: Original strand, 50652381 - 50652437
Alignment:
Q  693 aattatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||| |||||||||||||||||||||  |||||| |||||||||||| |||| ||||    
T  50652381 aattttagagaaatgatatttgtacaaccattttatgacaacttttggataaattta 50652437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Complemental strand, 52454166 - 52454126
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  52454166 agagaaatgatatttgtacaatcaatttgtgacaacttttg 52454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 1402650 - 1402689
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  1402650 gagaaatgatatttgtacatccattttatgacaacttttg 1402689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 736
Target Start/End: Complemental strand, 3958092 - 3958053
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactt 736  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  3958092 atagagaaatgatatttgtacaatcaatttgtgacaactt 3958053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 24483034 - 24482995
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  24483034 gagaaatgatatttgaacatccattttgtgacaacttttg 24482995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 741
Target Start/End: Original strand, 31143264 - 31143311
Alignment:
Q  694 attatagagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  31143264 attaaagagaagtgatatttgtacaatcattttttgacaacttttgaa 31143311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 43169814 - 43169775
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  43169814 agagaaatgatatttgtacaaccattttgtgacaactttt 43169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 43333742 - 43333703
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  43333742 agagaaatgatatttgtacagtcattttatgacaactttt 43333703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 737
Target Start/End: Original strand, 47683799 - 47683838
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  47683799 tagagaaatgatatttgtacaaccattttgtgacaacttt 47683838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 737
Target Start/End: Original strand, 49196690 - 49196733
Alignment:
Q  694 attatagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||| ||||||||||||||||||||  |||||||||||||||||    
T  49196690 attaaagagaaatgatatttgtacaaccattttgtgacaacttt 49196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 462472 - 462434
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaactttt 462434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 3281776 - 3281738
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  3281776 agagaaatgatatttgaacatttattttgtgacaacttt 3281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 6999168 - 6999218
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg-aataacttt 748  Q
    |||||||||||||||| ||||||||||| ||||||||| || |||||||||    
T  6999168 agagaaatgatatttgaacattcattttatgacaacttctgtaataacttt 6999218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 736
Target Start/End: Complemental strand, 7294173 - 7294135
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactt 736  Q
    |||||||||||||||||||||| || |||||||||||||    
T  7294173 tagagaaatgatatttgtacatccactttgtgacaactt 7294135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 8254026 - 8254064
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  8254026 agagaaatgatatttgtacaaccattttgtgacaacttt 8254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 30568031 - 30567993
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  30568031 gagaaatgatatttgaacatttattttgtgacaactttt 30567993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 748
Target Start/End: Original strand, 41717261 - 41717311
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||| | |||| |||||||||||| || ||||||    
T  41717261 tagagaaatgatatttgtacaattatttagtgacaacttttaaacaacttt 41717311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 46094422 - 46094460
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  46094422 agagaaatgatatttggacattcattttatgacaacttt 46094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 701 - 739
Target Start/End: Original strand, 47101523 - 47101561
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  47101523 agaaatgatatttgtacaaccattttgtgacaacttttg 47101561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 740
Target Start/End: Complemental strand, 47683975 - 47683933
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttga 740  Q
    ||||| |||||||||||||||  ||||||||||||||||||||    
T  47683975 tagagtaatgatatttgtacaaccattttgtgacaacttttga 47683933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 49761318 - 49761356
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  49761318 agagaaatgatatttgaacatccattttgtgacaacttt 49761356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 19150392 - 19150351
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||| ||||||| | ||||||||||    
T  19150392 tagagaaatgatatttgtacaatcattttttaacaacttttg 19150351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 736
Target Start/End: Original strand, 21196123 - 21196160
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  21196123 agagaaatgatatttgaacatccattttgtgacaactt 21196160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 27162541 - 27162492
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||| |||||||||||||  |||||||| |||||||||||| ||||||    
T  27162541 agagaagtgatatttgtacaaccattttgtaacaacttttgaacaacttt 27162492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 701 - 738
Target Start/End: Complemental strand, 31206921 - 31206884
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  31206921 agaaatgatatttgtacaatcattttgtgacaaatttt 31206884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 32931990 - 32931941
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  32931990 agagaaatgatatttgtacaaccaatttgtgacaacttttgtacaacttt 32931941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 36818955 - 36819004
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  36818955 agagaaatgatatttgtacaaccaatttgtgacaacttttgtacaacttt 36819004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 738
Target Start/End: Complemental strand, 36869911 - 36869870
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||||  |||||| |||||||||||    
T  36869911 atagagaaatgatatttgtacaaccattttttgacaactttt 36869870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Original strand, 37710404 - 37710445
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  37710404 gagagatgatatttgtacaatcattctgtgacaacttttgaa 37710445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Complemental strand, 39284738 - 39284697
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  39284738 gagaaatgatatttgtatattcactttttgacaacttttgaa 39284697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 42683825 - 42683866
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| ||||||||||||||| || |||||    
T  42683825 tagagaaatgatatttgaacattcattttgtgataatttttg 42683866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 44677557 - 44677516
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| ||||| |||||||||||||    
T  44677557 tagagaaatgatatttgaacatccatttagtgacaacttttg 44677516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 44855250 - 44855299
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||| |   |||||||||||||||||| ||||||||    
T  44855250 agagaaatgatatttgtataactattttgtgacaacttttgtataacttt 44855299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Original strand, 46574150 - 46574190
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  46574150 gagaaatgatatttgaacattcattttgtgac-acttttgaa 46574190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 733
Target Start/End: Original strand, 50146484 - 50146521
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaa 733  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  50146484 tatagagaaatgatatttgtataatcattttgtgacaa 50146521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 53473609 - 53473658
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||| ||||||| |||||||| | ||||||    
T  53473609 agagaaatgatatttgtacaatcaatttgtgataacttttgtacaacttt 53473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 53932463 - 53932414
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  ||||||||||||| ||||| | ||||||    
T  53932463 agagaaatgatatttgtacaaccattttgtgacaatttttggacaacttt 53932414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 697 - 748
Target Start/End: Original strand, 337115 - 337166
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  337115 atagagaaatgatatttgtacaaccattttctgacaacttttgaataacttt 337166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 36064027 - 36064069
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  36064027 atagagaaatgatatttgtacaatcattttgtgacaacttttg 36064069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 737
Target Start/End: Complemental strand, 42569799 - 42569751
Alignment:
Q  689 tttaaattatagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  42569799 tttaaaatatagagaaatgatatttgaacattcattttatgacaacttt 42569751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 3946238 - 3946279
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  3946238 tagagaaatgatatttgaacatccattttgtgacaacttttg 3946279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 701 - 738
Target Start/End: Original strand, 6806909 - 6806946
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6806909 agaaatgatatttgtacaatcattttgtgacaactttt 6806946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 736
Target Start/End: Complemental strand, 11223931 - 11223894
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  11223931 agagaaatgatatttgtacatccattttgtgacaactt 11223894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 696 - 748
Target Start/End: Complemental strand, 7280030 - 7279978
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||||| || ||||||||||| ||| || ||||||    
T  7280030 tatagagaaatgatatttgtacatccactttgtgacaacattttaacaacttt 7279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Complemental strand, 17775502 - 17775462
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  17775502 tagagaaatgatatttgaacaatcattttgtgacaactttt 17775462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 38844861 - 38844813
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||    
T  38844861 gagaaatgatatttgtacaaccattttgtgacaacttttagataacttt 38844813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Original strand, 42443102 - 42443142
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  42443102 tagagaaatgatatttgtacaatcatttagtgacaactttt 42443142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 7592849 - 7592888
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  7592849 gagaaatgatatttgaacattcatttagtgacaacttttg 7592888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 14707415 - 14707376
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  14707415 gagaaatgatatttgaacattcattttttgacaacttttg 14707376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 16872227 - 16872188
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  16872227 gagaaatgatatttgaacatccattttgtgacaacttttg 16872188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 29991412 - 29991451
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  29991412 gagaaatgatatttgaacatccattttgtgacaacttttg 29991451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Original strand, 34718115 - 34718154
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  34718115 gagaaatgatatttgaacatccattttgtgacaacttttg 34718154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 701 - 748
Target Start/End: Complemental strand, 39719318 - 39719271
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||| ||| |||||||||||||||  ||||||||    
T  39719318 agaaatgatatttgtacaatcaatttgtgacaactttttgataacttt 39719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 748
Target Start/End: Complemental strand, 44380696 - 44380637
Alignment:
Q  689 tttaaattatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||| | ||||||||||||||||||||  |||||||||||||| ||| || ||||||    
T  44380696 tttaaataaaagagaaatgatatttgtacaaccattttgtgacaacctttaaacaacttt 44380637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 703 - 737
Target Start/End: Complemental strand, 14710950 - 14710916
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| ||||||||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaacttt 14710916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 16966782 - 16966824
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||| ||||| |||||||||||||    
T  16966782 atagagaaatgatatttgaacatccatttagtgacaacttttg 16966824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 30439566 - 30439528
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  30439566 agagaaatgatatttgaacatccattttgtgacaacttt 30439528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 733
Target Start/End: Original strand, 34473948 - 34473982
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaa 733  Q
    |||||||||||||||||||||||| ||||||||||    
T  34473948 agagaaatgatatttgtacattcactttgtgacaa 34473982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 39453478 - 39453440
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  39453478 gagaaatgatatttggacatccattttgtgacaactttt 39453440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 40413410 - 40413372
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaacttt 40413372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 41541868 - 41541906
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  41541868 agagaaatgatatttgaacatccattttgtgacaacttt 41541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 739
Target Start/End: Complemental strand, 42620051 - 42620009
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||||||| |||||| | ||||||||||    
T  42620051 atagagaaatgatatttgtacatccattttctaacaacttttg 42620009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 45081079 - 45081117
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  45081079 agagaaatgatatatgtacattcattttttgacaacttt 45081117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 9549272 - 9549231
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||| |||||||||||| |||| |||||||||||||||||||    
T  9549272 tagaaaaatgatatttgaacatccattttgtgacaacttttg 9549231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 13884231 - 13884194
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  13884231 gagaaatgatatttgtacaatcattttttgacaacttt 13884194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 35356227 - 35356190
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  35356227 gagaaatgatatttgaacattcattttgtgataacttt 35356190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 744
Target Start/End: Complemental strand, 38128848 - 38128803
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataa 744  Q
    |||||||||| |||||||||  |||||||||||||||||| |||||    
T  38128848 agagaaatgacatttgtacaaccattttgtgacaactttttaataa 38128803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 40380280 - 40380329
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||  ||||| |||||||||||| | ||||||    
T  40380280 agagaaatgatatttgtacatctattttatgacaacttttgtacaacttt 40380329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 41273514 - 41273563
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  41273514 agagaaatgatatttgtacaaacaatttgtgacaacttttgtacaacttt 41273563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 748
Target Start/End: Complemental strand, 27164910 - 27164860
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  27164910 tagagaaatgatatttgtacaatcaatttgtgacaacttttgtataacttt 27164860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 16980296 - 16980336
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  16980296 agagaaatgatatttgaacattcattttgtgacaacttttg 16980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 737
Target Start/End: Original strand, 25887587 - 25887631
Alignment:
Q  693 aattatagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  25887587 aattatagagaaatgatatttgtacatccactttgtgacaacttt 25887631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 29162350 - 29162302
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  29162350 gagaaatgatatttgtacaatcaatttgtgacaacttttgtataacttt 29162302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 738
Target Start/End: Complemental strand, 33180783 - 33180743
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  33180783 tagagaaatgatatttgaacattcattttgtgacaactttt 33180743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 694 - 738
Target Start/End: Original strand, 41080120 - 41080164
Alignment:
Q  694 attatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  41080120 attattgagaaatgatatttgtacaatcattttgtgacaactttt 41080164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 697 - 748
Target Start/End: Original strand, 13437195 - 13437246
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||| |||  ||||||||||||||||||||| ||||||    
T  13437195 atagagaaatgatatttgcacaaccattttgtgacaacttttgaacaacttt 13437246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 42663084 - 42663122
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  42663084 gagaaatgatatttgtacatccattttgtgacaactttt 42663122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 701 - 739
Target Start/End: Complemental strand, 46812975 - 46812937
Alignment:
Q  701 agaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  46812975 agaaatgatatttgaacattcattttgtgacaacttttg 46812937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 697 - 738
Target Start/End: Original strand, 19426577 - 19426618
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  19426577 atagagaaatgatatttgtacaaccattttgtgacaactttt 19426618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 37899321 - 37899362
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  37899321 tagagaaatgatatttgaacatccattttgtgacaacttttg 37899362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 13729725 - 13729765
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  13729725 agagaaatgatatttgaacatccattttgtgacaacttttg 13729765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 748
Target Start/End: Complemental strand, 30864496 - 30864440
Alignment:
Q  692 aaattatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||| ||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  30864496 aaattaaagagaaatgatatttgtacaaccaatttgtgacaacttttgtacaacttt 30864440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Original strand, 33050183 - 33050231
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaacttttgtacaacttt 33050231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 737
Target Start/End: Original strand, 3293139 - 3293178
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  3293139 tagagaaatgatatttgaacattcatttggtgacaacttt 3293178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 4971289 - 4971328
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  4971289 agagaaatgatatttgtacaaccattttgtgacaactttt 4971328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 21023188 - 21023149
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  21023188 gagaaatgatatttgaacattcatttagtgacaacttttg 21023149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 24700120 - 24700159
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  24700120 agagaaatgatatttgtacaatcattttgtaacaactttt 24700159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 28862142 - 28862104
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  28862142 agagaaatgatatttgtacatccattttatgacaacttt 28862104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 749
Target Start/End: Original strand, 37392042 - 37392092
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||||  |||||| ||||||||||| || |||||||    
T  37392042 agagaaatgatatttgtacaaccattttttgacaacttttaaacaacttta 37392092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 37856226 - 37856188
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  37856226 agagaaatgatatttgtacaaccattttgtgacaacttt 37856188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 745
Target Start/End: Original strand, 41227066 - 41227112
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataac 745  Q
    ||||||||||||||| |||| | |||||||||||||||||| |||||    
T  41227066 agagaaatgatatttatacaattattttgtgacaacttttggataac 41227112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 41985161 - 41985123
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaacttt 41985123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 749
Target Start/End: Original strand, 44187690 - 44187740
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||| |||||| ||||||| ||||||||||| || |||||||    
T  44187690 agagaaatgatatgtgtacaatcattttttgacaacttttaaacaacttta 44187740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 736
Target Start/End: Complemental strand, 156054 - 156017
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||| || |||||||||||||    
T  156054 agagaaatgatatttgtacatccactttgtgacaactt 156017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 704 - 737
Target Start/End: Original strand, 2346951 - 2346984
Alignment:
Q  704 aatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||||||||||| ||||||||||    
T  2346951 aatgatatttgtacattcattttatgacaacttt 2346984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 2347130 - 2347093
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||  |||||||||||||||||    
T  2347130 gagaaatgatatttgtacaaccattttgtgacaacttt 2347093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 3040411 - 3040460
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||| |||||||||||  || |||||||||||||||| ||||||||    
T  3040411 agagaaattatatttgtacaaccaatttgtgacaacttttgtataacttt 3040460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 12141898 - 12141947
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||| |||||||||||  |||||||||| |||||||||| ||||||    
T  12141898 agagaaatcatatttgtacaaccattttgtgataacttttgaacaacttt 12141947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 740
Target Start/End: Complemental strand, 27070740 - 27070699
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttga 740  Q
    |||||||||||||||||||| ||||||| | |||||||||||    
T  27070740 agagaaatgatatttgtacaatcattttattacaacttttga 27070699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 740
Target Start/End: Original strand, 27207573 - 27207614
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttga 740  Q
    |||||||||||||||||||| ||||||| | |||||||||||    
T  27207573 agagaaatgatatttgtacaatcattttattacaacttttga 27207614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 28036742 - 28036783
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||| ||||||| |||||||| |||||||||||||||    
T  28036742 tagagaaataatatttgaacattcatgttgtgacaacttttg 28036783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Complemental strand, 31711996 - 31711959
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  31711996 gagaaatgatatttgaatattcattttgtgacaacttt 31711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 37899286 - 37899245
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  37899286 tagagaaatgatatttgaacatccattttgtgacaatttttg 37899245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 749
Target Start/End: Complemental strand, 40717307 - 40717258
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||| |||||||| || ||| ||||||||||| ||||||||||    
T  40717307 gagaaatgatacttgtacatccactttatgacaactttttaataacttta 40717258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 739
Target Start/End: Original strand, 41893909 - 41893954
Alignment:
Q  694 attatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||| |||||||||||||||| |||| |||||| ||||||||||||    
T  41893909 attaaagagaaatgatatttgaacatccattttatgacaacttttg 41893954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 44511138 - 44511187
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||| |||||  ||||||||||||||||||| | ||||||    
T  44511138 agagaaatgatattcgtacaaccattttgtgacaacttttgtacaacttt 44511187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 700 - 741
Target Start/End: Original strand, 27440479 - 27440520
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  27440479 gagaaatgatatttgtacaatcattttgtgacaacttttgaa 27440520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 695 - 739
Target Start/End: Original strand, 8920073 - 8920117
Alignment:
Q  695 ttatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  8920073 ttatagagaaatgatatttgaacatccattttgtgacaacttttg 8920117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 741
Target Start/End: Complemental strand, 22402700 - 22402656
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||    
T  22402700 atagagaaatgatatttgaacatttattttgtgacaacttttgaa 22402656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 700 - 746
Target Start/End: Original strand, 9933500 - 9933546
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataact 746  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  9933500 gagaaatgatatttgaacattcattttatgacaacttttgaacaact 9933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 703 - 749
Target Start/End: Original strand, 10426467 - 10426513
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||    
T  10426467 aaatgatatttgtacaatcattttgtcacaacttttgaacaacttta 10426513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 695 - 749
Target Start/End: Complemental strand, 15918066 - 15918012
Alignment:
Q  695 ttatagagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||| ||||||||||||||||||| | | |||||||||||||||| |||||||||    
T  15918066 ttattgagaaatgatatttgtacaattaatttgtgacaacttttgtataacttta 15918012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 697 - 739
Target Start/End: Original strand, 30640787 - 30640829
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  30640787 atagagaaatgatatttgaacatccattttgtgacaacttttg 30640829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 14914371 - 14914420
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  14914371 agagaaatgatatttgtacaaccattttgtgacaacttttggacaacttt 14914420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 700 - 749
Target Start/End: Original strand, 17063865 - 17063914
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||| ||||||| ||||||||||| || |||||||    
T  17063865 gagaaatgatatttgtacaatcattttttgacaacttttaaacaacttta 17063914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 736
Target Start/End: Complemental strand, 26660483 - 26660446
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26660483 agagaaatgatatttgtacatccattttgtgacaactt 26660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 736
Target Start/End: Complemental strand, 26932075 - 26932038
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26932075 agagaaatgatatttgtacatccattttgtgacaactt 26932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Original strand, 42699057 - 42699105
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||    
T  42699057 gagaaatgatatttgtacaaccattttgtgacaactttttgataacttt 42699105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 3109658 - 3109619
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  3109658 gagaaatgatatttgtacaatcaatttgtgacaacttttg 3109619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 21064297 - 21064258
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  21064297 gagaaatgatatttgaacattcatttagtgacaacttttg 21064258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 744
Target Start/End: Complemental strand, 26685570 - 26685523
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaataa 744  Q
    |||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  26685570 atagagtaataatatttgtacaaccattttgtgacaacttttgaataa 26685523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 744
Target Start/End: Complemental strand, 26955301 - 26955254
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaacttttgaataa 744  Q
    |||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  26955301 atagagtaataatatttgtacaaccattttgtgacaacttttgaataa 26955254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 739
Target Start/End: Original strand, 4088433 - 4088482
Alignment:
Q  689 tttaaattatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||| |||||||||||||||||||||| |||||| | ||||||||||    
T  4088433 tttaaatt-tagagaaatgatatttgtacatccattttataacaacttttg 4088482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 748
Target Start/End: Original strand, 9594476 - 9594526
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  9594476 tagagaaatgatatttgtacaaccaatttgtgacaacttttgtacaacttt 9594526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 736
Target Start/End: Complemental strand, 14324041 - 14324003
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  14324041 tagagaaatgatatttgcacatccattttgtgacaactt 14324003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 738
Target Start/End: Original strand, 19983825 - 19983879
Alignment:
Q  684 ttgcctttaaattatagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||| ||||||||| ||||||||||||||||||| | ||||| |||||| ||||    
T  19983825 ttgcccttaaattattgagaaatgatatttgtacaattattttatgacaattttt 19983879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Original strand, 2629818 - 2629859
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  2629818 gagaaatgatatttgtacaaccattttttgacaacttttgaa 2629859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 2652653 - 2652694
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||    
T  2652653 tagagaattgatatttgtacattcattttatgataacttttg 2652694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 736
Target Start/End: Complemental strand, 11768062 - 11768025
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactt 736  Q
    ||||||||||||||||||||| || |||||||||||||    
T  11768062 agagaaatgatatttgtacatccactttgtgacaactt 11768025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Original strand, 16143390 - 16143427
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||  |||||||||||||||||    
T  16143390 gagaaatgatatttgtacaaccattttgtgacaacttt 16143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 748
Target Start/End: Original strand, 18449264 - 18449309
Alignment:
Q  703 aaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||| || ||||||||||||||| || ||||||    
T  18449264 aaatgatatttgtacatccactttgtgacaactttttaacaacttt 18449309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 18695316 - 18695357
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||||  |||||||| ||||||||||    
T  18695316 tagagaaatgatatttgtacaaccattttgtaacaacttttg 18695357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 740
Target Start/End: Original strand, 28811428 - 28811469
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttga 740  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  28811428 agagaaatgatatttgtacaaccactttgtgacaacttttga 28811469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 32634707 - 32634756
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||| | |||||||||||||| | ||||||    
T  32634707 agagaaatgatatttgtacaatcaatctgtgacaacttttgtacaacttt 32634756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 749
Target Start/End: Original strand, 41460116 - 41460165
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    |||||||||||||| |||| ||||||| ||||||||||| || |||||||    
T  41460116 gagaaatgatatttatacaatcattttttgacaacttttaaacaacttta 41460165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 43368752 - 43368797
Alignment:
Q  336 cgacctaacaatttcagtatttttatcaattaagttaggatttgtg 381  Q
    ||||||||| ||||| | |||||||||||||||||||| |||||||    
T  43368752 cgacctaactatttctgaatttttatcaattaagttagaatttgtg 43368797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 700 - 739
Target Start/End: Complemental strand, 754509 - 754470
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  754509 gagaaatgatatttgaacattcattttgtgacaacttttg 754470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 15722575 - 15722536
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  15722575 agagaaatgatatttgtacaatcattttgtgacaactttt 15722536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 3339571 - 3339522
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  3339571 agagaaatgatatttgtacaaccattttgtgacaacttttgtacaacttt 3339522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 27334857 - 27334906
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||   |||||||||||||||||| ||||||||    
T  27334857 agagaaatgatatttgtacaactattttgtgacaacttttgtataacttt 27334906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 748
Target Start/End: Original strand, 27395597 - 27395646
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||   |||||||||||||||||| ||||||||    
T  27395597 agagaaatgatatttgtacaactattttgtgacaacttttgtataacttt 27395646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 697 - 738
Target Start/End: Original strand, 30714677 - 30714718
Alignment:
Q  697 atagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  30714677 atagagaaatgatatttgtacaatcattttgtgacagctttt 30714718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 12500098 - 12500050
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||||    
T  12500098 gagaaatgatatttgcacaatcattttgtgacaatttttaaataacttt 12500050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Complemental strand, 12507427 - 12507379
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||||    
T  12507427 gagaaatgatatttgcacaatcattttgtgacaatttttaaataacttt 12507379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 748
Target Start/End: Original strand, 12508803 - 12508851
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||||    
T  12508803 gagaaatgatatttgcacaatcattttgtgacaatttttaaataacttt 12508851  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Complemental strand, 15318260 - 15318220
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  15318260 agagaaatgatatttgaacatccattttgtgacaacttttg 15318220  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 738
Target Start/End: Complemental strand, 30906736 - 30906696
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  30906736 tagagaaatgatatttctacattcattttatgacaactttt 30906696  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 33421759 - 33421799
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  33421759 agagaaatgatatttgaacatccattttgtgacaacttttg 33421799  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 739
Target Start/End: Complemental strand, 18141376 - 18141333
Alignment:
Q  696 tatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||    
T  18141376 tatagagaaatgatatttaaacattcattttatgacaacttttg 18141333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 739
Target Start/End: Complemental strand, 30152609 - 30152562
Alignment:
Q  692 aaattatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||    
T  30152609 aaatgatagaaaaatgatatttgaacattcatttagtgacaacttttg 30152562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 3180064 - 3180026
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  3180064 agagaaatgatatttgtacaatcattttttgacaacttt 3180026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 28748123 - 28748161
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  28748123 agagaaatgatatttgaacatccattttgtgacaacttt 28748161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 30945822 - 30945860
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  30945822 agagaaatgatatttatacaatcattttgtgacaacttt 30945860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 737
Target Start/End: Original strand, 7611495 - 7611532
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  7611495 gagaaatgatatttgaacaatcattttgtgacaacttt 7611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 15666845 - 15666796
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    ||||||||||||||||||||  |||||| ||||||||||| || ||||||    
T  15666845 agagaaatgatatttgtacaaccattttctgacaactttttaacaacttt 15666796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 17417307 - 17417258
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||| ||||| |||||||| ||||| | ||||||    
T  17417307 agagaaatgatatttgtacaatcattatgtgacaatttttggacaacttt 17417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Complemental strand, 20822941 - 20822900
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||||||||||| |||| |||||| ||||||||||||    
T  20822941 tagagaaatgatatttgaacatccattttatgacaacttttg 20822900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 700 - 749
Target Start/End: Complemental strand, 35569 - 35520
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaacttttgaataacttta 749  Q
    ||||||||||||||||||| ||||||||  ||||||||| ||||||||||    
T  35569 gagaaatgatatttgtacaatcattttgctacaactttttaataacttta 35520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 695 - 739
Target Start/End: Original strand, 19631 - 19675
Alignment:
Q  695 ttatagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||    
T  19631 ttatagagaaatgatatttgaacatccatttagtgacaacttttg 19675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 699 - 739
Target Start/End: Original strand, 8213 - 8253
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  8213 agagaaatgatatttgaacattcattttatgacaacttttg 8253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 22577 - 22616
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  22577 agagaaatgatatttgaacattcattttgtgacagctttt 22616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 741
Target Start/End: Complemental strand, 853 - 811
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttttgaa 741  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||    
T  853 agaggaatgatatttgtacaatcattttttgacaacttttgaa 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 748
Target Start/End: Original strand, 1076 - 1126
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttgaataacttt 748  Q
    |||||||||||||||||||||   ||||||||||||||||| || ||||||    
T  1076 tagagaaatgatatttgtacaactattttgtgacaacttttaaacaacttt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 737
Target Start/End: Original strand, 44785 - 44823
Alignment:
Q  699 agagaaatgatatttgtacattcattttgtgacaacttt 737  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  44785 agagaaatgatatttgaacatccattttgtgacaacttt 44823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 16262 - 16300
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  16262 gagaaatgatatttggacatccattttgtgacaactttt 16300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 738
Target Start/End: Original strand, 6427 - 6465
Alignment:
Q  700 gagaaatgatatttgtacattcattttgtgacaactttt 738  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  6427 gagaaatgatatttgtacatccattttatgacaactttt 6465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 38423 - 38464
Alignment:
Q  698 tagagaaatgatatttgtacattcattttgtgacaacttttg 739  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||    
T  38423 tagagaaataatatttgaacattcattttatgacaacttttg 38464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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