View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4568-Insertion-13 (Length: 265)
Name: NF4568-Insertion-13
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4568-Insertion-13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 49006304 - 49006562
Alignment:
| Q |
7 |
aatatgttgatttagtgtgccttacctcttggatcttaatcaactcatgaatctctatttaagcctccatggtttcaacacttctgcttgtgcactaaag |
106 |
Q |
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| T |
49006304 |
aatatgttgatttagtgtgccttacctcttggatcttaatcaactcatgaatctctatttaagcctccatggtttcaacacttctgcttgtgcactaaag |
49006403 |
T |
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| Q |
107 |
ccataccaaatactccaccatggcttcacatattcatcactatctactattatcctttaacataatccttcaccttttttcatctacattgtgtgatcaa |
206 |
Q |
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| T |
49006404 |
ccataccaaatactccaccatggcttcacatattcatcactatctactattatcctttaacataatccttcaccttttttcatctacattgtgtgatcaa |
49006503 |
T |
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| Q |
207 |
aacttcaacaactatatcattcacatgaacttatcagccatgcccaaacccttcttaag |
265 |
Q |
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| T |
49006504 |
aacttcaacaactatattattcacatgaacttatcagccatgccaaaacccttcttaag |
49006562 |
T |
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Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 34964215 - 34964177
Alignment:
| Q |
216 |
aactatatcattcacatgaacttatcagccatgcccaaa |
254 |
Q |
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| T |
34964215 |
aactatatcatccacatgaacttatcagccatgcccaaa |
34964177 |
T |
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