View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4568-Insertion-19 (Length: 198)
Name: NF4568-Insertion-19
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4568-Insertion-19 |
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Alignment Details
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 33511242 - 33511329
Alignment:
| Q |
87 |
aacttatatataaaaacgacaatacttgtatttgtggcaaatgatgtgtaagaagaagcatatctgtataacaaagtctactagtatt |
174 |
Q |
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| T |
33511242 |
aacttatatataaaaacgacaatacttgtatttgtggcaaatgatgtgtaagaagaagcatatctgtataacaaagtctactagtatt |
33511329 |
T |
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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 33511343 - 33511371
Alignment:
| Q |
170 |
gtattcaaatagttggctctcgcttccaa |
198 |
Q |
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| T |
33511343 |
gtattcaaatagttggctctcgcttccaa |
33511371 |
T |
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