View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4568-Insertion-8 (Length: 518)
Name: NF4568-Insertion-8
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4568-Insertion-8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 7 - 518
Target Start/End: Complemental strand, 8902709 - 8902193
Alignment:
| Q |
7 |
atttttaaaccatgtagaaagtgaaaatgaaatctgctgagcttgtcaaaaagaagaagaagaaaaacttttattgatatgaagattttactaccatttt |
106 |
Q |
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| T |
8902709 |
atttttaaaccatgtagaaagtgaaaatgaaatctgctgaacttgtcaaaaagaagaagaagaaaaacttttattgatatgaagattttactaccatttt |
8902610 |
T |
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| Q |
107 |
tggtgaaacaaagtaaaagagtggaaaaa-tatatatgctacaagctttaaatgaaccgtctcatcaaaatgnnnnnnn----catagtagggccattta |
201 |
Q |
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| T |
8902609 |
tggtgaaacaaagcaaaagagtggaaaaaatatatatgctacaagctttaaatgaaccgtctcatcaaaatgaaaaaaaataacatagtagggccattta |
8902510 |
T |
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| Q |
202 |
ttgaagaacattttctatctttatttctcgacatttgcttctttctactttgcactaaggtgcaggtctgtaatcttttatgaccataaaaaggttaaaa |
301 |
Q |
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| T |
8902509 |
ttgaagaacattttctatctttatttctctacatttgtttctttctactttgcactaaggtgcaggtctgtaatcttttatgaccataaaaaggttaaaa |
8902410 |
T |
|
| Q |
302 |
acaaatggaaaaataatgagttccaattcatgtgtttcaaactttaggtccatcatgccaaacaaaataattataattataattttcttaccgtgatata |
401 |
Q |
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| T |
8902409 |
acaaatggaaaaataatgagttccaattcatgtgtttcaaactttaggtccatcatgccaaacaaaataattataattataattttcttaccgtgatata |
8902310 |
T |
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| Q |
402 |
tgacatcatccaaatataatgtatatgaccatgactaattttcttcatctttgcgttaaattcacttcttaatgtaatcataatcacatataatatttat |
501 |
Q |
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| T |
8902309 |
tgacatcatccaaatataatgtatatgaccatgactaattttcttcatctttgcgttaaattcacttcttaatgtaatcataatcacatataatatttat |
8902210 |
T |
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| Q |
502 |
acatgaccgtgactaag |
518 |
Q |
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| T |
8902209 |
acatgaccgtgactaag |
8902193 |
T |
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