View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4568-Insertion-9 (Length: 384)
Name: NF4568-Insertion-9
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4568-Insertion-9 |
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Alignment Details
Target: chr2 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 291
Target Start/End: Complemental strand, 43563024 - 43562741
Alignment:
| Q |
8 |
agaacaaatgctagtggtgtggtgtcattagacattgtccattcctacaattgaagcgtggaagacaccaattggttgtgaatgtctttaattaaaaact |
107 |
Q |
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| T |
43563024 |
agaacaaatgctagtggtgtggtgtcattagacattgtccattcctacaattgaagcgtggaagacaccaattggttgtgaatgtctttaattaaaaact |
43562925 |
T |
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| Q |
108 |
aaattgggtggagaatggggttttgtaaaaagtaacaagacaattgttaaaggtgggatgttgacttatgaaactcaaccaaaaatgtggctaatacaca |
207 |
Q |
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| T |
43562924 |
aaattgggtggagaatggggttttgtaaaaagtaacaagacaattgttaaaggtgggatgttgacttatgaaattcaaccaaaaatgtggctaatacaca |
43562825 |
T |
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| Q |
208 |
tgtgtaataccttaaaacataacttcattatttttaggtacaaccttaaaacatactaactttttacacctcaaatctatttaa |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
43562824 |
tgtgtaataccttaaaacataacttcattatttttaggtacaaccttaaaacatactaactttatacacctcaaatctatttaa |
43562741 |
T |
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