View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4568_high_2 (Length: 559)

Name: NF4568_high_2
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4568_high_2
NF4568_high_2
[»] chr4 (33 HSPs)
chr4 (20-256)||(50779533-50779774)
chr4 (356-453)||(26447380-26447477)
chr4 (353-451)||(21097137-21097235)
chr4 (356-452)||(27764240-27764336)
chr4 (355-451)||(45255974-45256070)
chr4 (360-452)||(36621670-36621762)
chr4 (359-448)||(22181218-22181307)
chr4 (240-307)||(50779919-50779986)
chr4 (358-452)||(38485643-38485733)
chr4 (384-452)||(637882-637950)
chr4 (385-448)||(4168387-4168450)
chr4 (386-448)||(50563702-50563764)
chr4 (356-421)||(50643743-50643808)
chr4 (356-452)||(51837060-51837155)
chr4 (358-421)||(29826606-29826669)
chr4 (382-432)||(1729604-1729654)
chr4 (389-442)||(6386520-6386573)
chr4 (356-404)||(48077862-48077910)
chr4 (354-421)||(49492512-49492580)
chr4 (382-421)||(26578189-26578228)
chr4 (355-421)||(36011842-36011909)
chr4 (356-421)||(1621875-1621941)
chr4 (356-421)||(10472497-10472563)
chr4 (356-421)||(13635725-13635791)
chr4 (356-421)||(15051136-15051202)
chr4 (356-421)||(30597699-30597765)
chr4 (356-421)||(46672439-46672505)
chr4 (356-421)||(51921265-51921331)
chr4 (363-391)||(6768611-6768639)
chr4 (385-421)||(11786004-11786040)
chr4 (385-421)||(11798171-11798207)
chr4 (385-421)||(25574128-25574164)
chr4 (362-402)||(49492405-49492445)
[»] chr8 (21 HSPs)
chr8 (356-463)||(1208709-1208816)
chr8 (356-452)||(32987414-32987510)
chr8 (355-452)||(39021974-39022071)
chr8 (355-452)||(7058113-7058210)
chr8 (355-451)||(4836671-4836767)
chr8 (355-451)||(4842116-4842212)
chr8 (385-442)||(8550533-8550590)
chr8 (356-452)||(15260820-15260917)
chr8 (354-421)||(42433699-42433766)
chr8 (385-452)||(7614097-7614164)
chr8 (385-442)||(15181820-15181877)
chr8 (354-423)||(40012180-40012249)
chr8 (363-402)||(10237487-10237526)
chr8 (363-402)||(30414047-30414086)
chr8 (363-402)||(34647173-34647212)
chr8 (356-421)||(10237354-10237420)
chr8 (356-421)||(19784271-19784337)
chr8 (356-421)||(41099182-41099248)
chr8 (356-421)||(43690640-43690706)
chr8 (353-421)||(34633321-34633390)
chr8 (385-421)||(30413944-30413980)
[»] chr5 (15 HSPs)
chr5 (356-463)||(34329127-34329234)
chr5 (358-448)||(25017190-25017280)
chr5 (356-452)||(28070122-28070218)
chr5 (358-452)||(13362772-13362866)
chr5 (356-452)||(23335676-23335772)
chr5 (385-452)||(16668763-16668830)
chr5 (381-452)||(2827036-2827107)
chr5 (385-442)||(18465535-18465592)
chr5 (378-428)||(42512221-42512271)
chr5 (353-448)||(33868152-33868248)
chr5 (363-402)||(13553116-13553155)
chr5 (351-421)||(26637837-26637908)
chr5 (356-421)||(13552983-13553049)
chr5 (356-421)||(15416664-15416730)
chr5 (385-421)||(14940356-14940392)
[»] chr3 (25 HSPs)
chr3 (356-452)||(19385284-19385380)
chr3 (352-452)||(51362407-51362507)
chr3 (356-452)||(7045269-7045365)
chr3 (358-452)||(50754008-50754102)
chr3 (360-452)||(16277383-16277475)
chr3 (368-452)||(52987619-52987703)
chr3 (355-452)||(8718100-8718197)
chr3 (355-452)||(9069987-9070084)
chr3 (385-452)||(39099226-39099293)
chr3 (398-448)||(17627204-17627254)
chr3 (385-451)||(23699357-23699423)
chr3 (385-451)||(23717812-23717878)
chr3 (385-451)||(23736268-23736334)
chr3 (363-402)||(26960759-26960798)
chr3 (355-421)||(46237758-46237825)
chr3 (363-402)||(51361525-51361564)
chr3 (356-421)||(3475407-3475473)
chr3 (356-421)||(9595980-9596046)
chr3 (356-421)||(19284671-19284737)
chr3 (356-421)||(26662538-26662604)
chr3 (356-421)||(47335032-47335098)
chr3 (357-421)||(33414013-33414078)
chr3 (385-421)||(47728418-47728454)
chr3 (362-402)||(50755195-50755235)
chr3 (385-421)||(53594998-53595034)
[»] chr2 (14 HSPs)
chr2 (356-452)||(18298080-18298176)
chr2 (356-452)||(25192892-25192988)
chr2 (356-452)||(20709774-20709870)
chr2 (357-453)||(14551287-14551382)
chr2 (374-461)||(4579778-4579865)
chr2 (395-448)||(4281761-4281814)
chr2 (385-450)||(25995316-25995381)
chr2 (385-448)||(5098746-5098809)
chr2 (356-417)||(2263573-2263635)
chr2 (350-421)||(7487254-7487326)
chr2 (356-421)||(15016566-15016632)
chr2 (356-421)||(39355035-39355101)
chr2 (411-448)||(43822409-43822446)
chr2 (398-442)||(36636916-36636960)
[»] chr1 (25 HSPs)
chr1 (356-452)||(18056784-18056880)
chr1 (356-452)||(22348039-22348135)
chr1 (356-442)||(16115851-16115937)
chr1 (385-452)||(37639371-37639438)
chr1 (353-452)||(23320054-23320161)
chr1 (356-452)||(45889596-45889692)
chr1 (385-447)||(35198155-35198217)
chr1 (398-442)||(179650-179694)
chr1 (356-448)||(8402284-8402369)
chr1 (355-421)||(23921898-23921964)
chr1 (398-452)||(30802438-30802492)
chr1 (355-421)||(28375463-28375530)
chr1 (385-421)||(11421624-11421660)
chr1 (385-421)||(16975984-16976020)
chr1 (385-421)||(34369690-34369726)
chr1 (356-418)||(4097911-4097974)
chr1 (356-421)||(24635926-24635992)
chr1 (356-421)||(25889028-25889094)
chr1 (364-402)||(46590762-46590800)
chr1 (356-421)||(49936937-49937003)
chr1 (356-421)||(50351803-50351869)
chr1 (385-421)||(18618865-18618901)
chr1 (385-421)||(31529665-31529701)
chr1 (385-421)||(33097435-33097471)
chr1 (385-421)||(44260548-44260584)
[»] chr6 (15 HSPs)
chr6 (354-452)||(33346340-33346438)
chr6 (356-452)||(34399641-34399737)
chr6 (355-452)||(29157225-29157322)
chr6 (356-452)||(15034944-15035040)
chr6 (386-452)||(24737660-24737726)
chr6 (382-452)||(18611215-18611285)
chr6 (354-431)||(35119237-35119310)
chr6 (359-414)||(12394387-12394442)
chr6 (363-402)||(4101967-4102006)
chr6 (356-421)||(1449542-1449608)
chr6 (356-421)||(1536896-1536962)
chr6 (356-421)||(31216662-31216728)
chr6 (357-421)||(34870086-34870151)
chr6 (398-442)||(877250-877294)
chr6 (385-421)||(6900833-6900869)
[»] chr7 (26 HSPs)
chr7 (356-452)||(30428873-30428969)
chr7 (355-460)||(48690894-48690999)
chr7 (356-463)||(28396722-28396829)
chr7 (356-449)||(12279745-12279838)
chr7 (356-452)||(46024027-46024123)
chr7 (356-451)||(15974906-15975001)
chr7 (355-449)||(12279640-12279734)
chr7 (385-452)||(46573469-46573536)
chr7 (350-463)||(48305231-48305343)
chr7 (402-463)||(48691038-48691099)
chr7 (385-452)||(5757416-5757483)
chr7 (391-452)||(33797966-33798027)
chr7 (385-442)||(44141230-44141287)
chr7 (353-421)||(25778834-25778902)
chr7 (384-452)||(32090606-32090674)
chr7 (353-421)||(763694-763763)
chr7 (355-421)||(16933244-16933311)
chr7 (355-421)||(16938627-16938694)
chr7 (355-421)||(31660068-31660135)
chr7 (356-421)||(30884222-30884288)
chr7 (356-421)||(41911109-41911175)
chr7 (356-421)||(46358520-46358586)
chr7 (385-421)||(20000674-20000710)
chr7 (385-425)||(27335625-27335664)
chr7 (385-421)||(34875519-34875555)
chr7 (385-425)||(46346712-46346752)
[»] scaffold0097 (1 HSPs)
scaffold0097 (356-452)||(13613-13709)
[»] scaffold0238 (1 HSPs)
scaffold0238 (356-442)||(25211-25297)
[»] scaffold0337 (1 HSPs)
scaffold0337 (359-448)||(7020-7109)
[»] scaffold0194 (1 HSPs)
scaffold0194 (355-452)||(27606-27703)
[»] scaffold0544 (1 HSPs)
scaffold0544 (357-448)||(10648-10739)
[»] scaffold0189 (1 HSPs)
scaffold0189 (355-418)||(11193-11256)
[»] scaffold0045 (2 HSPs)
scaffold0045 (363-402)||(33817-33856)
scaffold0045 (356-421)||(33684-33750)
[»] scaffold0571 (1 HSPs)
scaffold0571 (356-421)||(676-742)


Alignment Details
Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 20 - 256
Target Start/End: Original strand, 50779533 - 50779774
Alignment:
Q  20 gaatttaatttttacacgtggatcattaaaaagagaatataaacactttatacatatatccagttaaatcaaaatgtataaagtacttgtggtttgaacc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  50779533 gaatttaatttttacacgtggatcattaaaaagagaatataaacattttatacatataaccagttaaatcaaaatgtataaagtacttggggtttgaacc 50779632  T
Q  120 ctaaattctcaacttattcatcttcagaataatgaatttctaaccactaaaatat----cgaagaaaaaacattaaaccatataaaaataagaatgtata 215  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||  | |||| |||||||||||||||||||||    
T  50779633 ccaaattctcaacttattcatcttcagaataatgaatttctaaccactaaaataaataccgaagaaaaaaagtcaaactatataaaaataagaatgtata 50779732  T
Q  216 atcacatgttttatttg-ttttttaataattaatagaaaatg 256  Q
    |||||| ||||| |||| |||||||||||||||| |||||||    
T  50779733 atcacacgttttctttgtttttttaataattaatggaaaatg 50779774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 26447477 - 26447380
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttca 453  Q
    ||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26447477 ggcaaaagtaatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttca 26447380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 353 - 451
Target Start/End: Original strand, 21097137 - 21097235
Alignment:
Q  353 aagggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  21097137 aagggcaaaagttaccgtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagctt 21097235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 27764240 - 27764336
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  27764240 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttc 27764336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 355 - 451
Target Start/End: Original strand, 45255974 - 45256070
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  45255974 gggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggctt 45256070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 36621762 - 36621670
Alignment:
Q  360 aaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  36621762 aaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttc 36621670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 22181307 - 22181218
Alignment:
Q  359 aaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  22181307 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctagg 22181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 50779919 - 50779986
Alignment:
Q  240 ataattaatagaaaatgttaataagtgtccttgagacacttctcaacaaaataagaatcttgagacac 307  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50779919 ataattaatggaaaatgttaataagtgtctttgagacacttctcaacaaaataagaatcttgagacac 50779986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 38485733 - 38485643
Alignment:
Q  358 caaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||| ||||||||||||    |||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  38485733 caaaagttatggtgcataaggaa----ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttc 38485643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 637882 - 637950
Alignment:
Q  384 tttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  637882 tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttc 637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 448
Target Start/End: Original strand, 4168387 - 4168450
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  4168387 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctagg 4168450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 50563764 - 50563702
Alignment:
Q  386 tatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50563764 tatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattatagg 50563702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 50643743 - 50643808
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  50643743 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagat 50643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 51837155 - 51837060
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||| ||||| ||||| |||| || || | ||||| |||||||||||||||||| || ||||||||||||||||| |||||||||    
T  51837155 ggcaaaagttatggtgtataagaaaatccttat-catcgagcataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttc 51837060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 358 - 421
Target Start/End: Complemental strand, 29826669 - 29826606
Alignment:
Q  358 caaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||| || |||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  29826669 caaaagttatggtacataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 1729654 - 1729604
Alignment:
Q  382 tctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacac 432  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  1729654 tctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 6386573 - 6386520
Alignment:
Q  389 gcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||||||||||    
T  6386573 gcaccctgcataaacacttcacaaccatcagatttagtggacacgtgtaataat 6386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 48077910 - 48077862
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaaca 404  Q
    ||||||||||||  |||||||||||||| |||||||||||| |||||||    
T  48077910 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaaca 48077862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 49492580 - 49492512
Alignment:
Q  354 agggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  49492580 agggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 49492512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 26578228 - 26578189
Alignment:
Q  382 tctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  26578228 tctttatgcatcgtgcataaacacttcacaaccatcagat 26578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 36011842 - 36011909
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  36011842 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 36011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 1621875 - 1621941
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  1621875 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 1621941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 10472497 - 10472563
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| ||||||| ||||||||||||||||    
T  10472497 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagat 10472563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 13635791 - 13635725
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  13635791 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 13635725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 15051202 - 15051136
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  15051202 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 15051136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 30597699 - 30597765
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  30597699 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 30597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 46672439 - 46672505
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  46672439 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46672505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 51921331 - 51921265
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  51921331 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 51921265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 6768639 - 6768611
Alignment:
Q  363 gttatagtgcataaggaaatctttatgca 391  Q
    |||||||||||||||||||||||||||||    
T  6768639 gttatagtgcataaggaaatctttatgca 6768611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 11786004 - 11786040
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  11786004 ttatgcaccgtgcataaacacatcacaaccatcagat 11786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 11798171 - 11798207
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  11798171 ttatgcaccgtgcataaacacatcacaaccatcagat 11798207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 25574164 - 25574128
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  25574164 ttatgcaccctgcataaacacttcacaaccatcagat 25574128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 402
Target Start/End: Original strand, 49492405 - 49492445
Alignment:
Q  362 agttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    |||||| ||||||||||||||| |||||||||||| |||||    
T  49492405 agttatggtgcataaggaaatccttatgcaccgtgcataaa 49492445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 1208709 - 1208816
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcatc 455  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  1208709 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatcctaggcttcatc 1208808  T
Q  456 tctacaat 463  Q
    ||||||||    
T  1208809 tctacaat 1208816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 32987510 - 32987414
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 32987414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 39021974 - 39022071
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  39021974 gggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttc 39022071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 7058113 - 7058210
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  7058113 gggcaaaagttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttc 7058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 355 - 451
Target Start/End: Complemental strand, 4836767 - 4836671
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||| |||||||| |||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4836767 gggccaaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagctt 4836671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 355 - 451
Target Start/End: Complemental strand, 4842212 - 4842116
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||| |||||||| |||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4842212 gggccaaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagctt 4842116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 385 - 442
Target Start/End: Original strand, 8550533 - 8550590
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8550533 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat 8550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 15260917 - 15260820
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| |||||||||||  | | |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttc 15260820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 42433699 - 42433766
Alignment:
Q  354 agggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  42433699 agggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 42433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 7614097 - 7614164
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  7614097 ttatgcaccatgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttc 7614164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 385 - 442
Target Start/End: Original strand, 15181820 - 15181877
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||    
T  15181820 ttatgcaccctgcataaacacttcacaagcatcagatctagtgtacacgtgtaataat 15181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 40012249 - 40012180
Alignment:
Q  354 agggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatct 423  Q
    |||||||||||||| |||||||||||  || ||||||||| || ||||| |||| ||||||||| |||||    
T  40012249 agggcaaaagttatggtgcataaggatttccttatgcaccatgcataaagactttacaaccatcggatct 40012180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 10237526 - 10237487
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  10237526 gttatggtgcataaggaaatccttatgcaccgtgtataaa 10237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 30414086 - 30414047
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  30414086 gttatggtgcataaggaaatctttatgcaccgtgcataaa 30414047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 34647173 - 34647212
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  34647173 gttatggtgcataaggaaatccttatgcaccgtgtataaa 34647212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 10237354 - 10237420
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  10237354 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 10237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 19784271 - 19784337
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  19784271 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 19784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 41099182 - 41099248
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  41099182 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 41099248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 43690640 - 43690706
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  43690640 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 43690706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 34633390 - 34633321
Alignment:
Q  353 aagggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||||| || ||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  34633390 aagggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 34633321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 30413944 - 30413980
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  30413944 ttatgcaccgtgcataaacacatcacaaccatcagat 30413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 34329127 - 34329234
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcatc 455  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatcataggcttcatc 34329226  T
Q  456 tctacaat 463  Q
    ||||||||    
T  34329227 tctacaat 34329234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 25017280 - 25017190
Alignment:
Q  358 caaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25017280 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttagg 25017190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 28070218 - 28070122
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  28070218 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttc 28070122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 13362772 - 13362866
Alignment:
Q  358 caaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  13362772 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttc 13362866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 23335772 - 23335676
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| |||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  23335772 ggcaaaagttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttc 23335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 16668830 - 16668763
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16668830 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 16668763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 2827107 - 2827036
Alignment:
Q  381 atctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||    
T  2827107 atctttatccaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttc 2827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 18465592 - 18465535
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  18465592 ttatgcatcctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat 18465535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 42512221 - 42512271
Alignment:
Q  378 gaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgt 428  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  42512221 gaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgt 42512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 33868152 - 33868248
Alignment:
Q  353 aagggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||||||||  ||||||||  | | | ||||||||| || |||||||||||||||||||| ||| || | |||| |||||||||| |||||    
T  33868152 aagggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgatttattttacatgtgtaataatcctagg 33868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 13553155 - 13553116
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  13553155 gttatggtgcataaggaaatccttatgcaccgtgtataaa 13553116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 26637908 - 26637837
Alignment:
Q  351 taaagggcaaaagttatagtgcataaggaaatct-ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||| |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  26637908 taaatggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagat 26637837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 13552983 - 13553049
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  13552983 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 13553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 15416664 - 15416730
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  15416664 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 15416730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 14940392 - 14940356
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  14940392 ttatgcaccgtgcataaacacatcacaaccatcagat 14940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 7e-38; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 19385380 - 19385284
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttc 19385284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 352 - 452
Target Start/End: Complemental strand, 51362507 - 51362407
Alignment:
Q  352 aaagggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  51362507 aaagggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggctt 51362408  T
Q  452 c 452  Q
    |    
T  51362407 c 51362407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 7045365 - 7045269
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  7045365 ggcaaaagttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttc 7045269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 50754008 - 50754102
Alignment:
Q  358 caaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50754008 caaaagttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 50754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 16277475 - 16277383
Alignment:
Q  360 aaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  16277475 aaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttc 16277383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 368 - 452
Target Start/End: Complemental strand, 52987703 - 52987619
Alignment:
Q  368 agtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52987703 agtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 52987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 8718100 - 8718197
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||||| ||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8718100 gggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 8718197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 9069987 - 9070084
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||||| ||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  9069987 gggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 9070084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 39099226 - 39099293
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39099226 ttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 39099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 17627254 - 17627204
Alignment:
Q  398 ataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17627254 ataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 17627204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 451
Target Start/End: Original strand, 23699357 - 23699423
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||| |||| || ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  23699357 ttatacaccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggctt 23699423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 451
Target Start/End: Original strand, 23717812 - 23717878
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||| |||| || ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  23717812 ttatacaccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggctt 23717878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 451
Target Start/End: Original strand, 23736268 - 23736334
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||| |||| || ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  23736268 ttatacaccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggctt 23736334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 26960798 - 26960759
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  26960798 gttatggtgcataaggaaatctttatgcaccgtgcataaa 26960759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Complemental strand, 46237825 - 46237758
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  46237825 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46237758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 51361525 - 51361564
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  51361525 gttatggtgcataaggaaatccttatgcaccgtgtataaa 51361564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 3475473 - 3475407
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  3475473 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 3475407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 9596046 - 9595980
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  9596046 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 9595980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 19284671 - 19284737
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  19284671 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 19284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 26662604 - 26662538
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  26662604 ggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 26662538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 47335032 - 47335098
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  47335032 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 47335098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 421
Target Start/End: Complemental strand, 33414078 - 33414013
Alignment:
Q  357 gcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 33414013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 47728418 - 47728454
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  47728418 ttatgcaccctgcataaacacttcacaaccatcagat 47728454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 50755235 - 50755195
Alignment:
Q  362 agttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    |||||| ||||||||||||||| |||||||||||| |||||    
T  50755235 agttatggtgcataaggaaatccttatgcaccgtgcataaa 50755195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 53594998 - 53595034
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  53594998 ttatgcaccctgcataaacacttcacaaccatcagat 53595034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 18298176 - 18298080
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 18298080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 25192892 - 25192988
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttc 25192988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 20709774 - 20709870
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  20709774 ggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttc 20709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 357 - 453
Target Start/End: Complemental strand, 14551382 - 14551287
Alignment:
Q  357 gcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttca 453  Q
    ||||||||||| ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  14551382 gcaaaagttatggtgcataaggaaattcttatgcac-gtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttca 14551287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 374 - 461
Target Start/End: Complemental strand, 4579865 - 4579778
Alignment:
Q  374 taaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcatctctaca 461  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||  || ||||||| ||||||    
T  4579865 taaggaaatccttatgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatcttatgcttcatttctaca 4579778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 4281814 - 4281761
Alignment:
Q  395 tgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4281814 tgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagg 4281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 25995316 - 25995381
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggct 450  Q
    ||||||||  || ||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  25995316 ttatgcactctgcataaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggct 25995381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 448
Target Start/End: Original strand, 5098746 - 5098809
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    ||||||||| || ||||||||||||||||||||| || || ||||||||||||||||| |||||    
T  5098746 ttatgcaccctgcataaacacttcacaaccatcaaatttattgtacacgtgtaataatcctagg 5098809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 2263573 - 2263635
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatc 417  Q
    |||||||||||| |||||||||  | | |||||||||||||| ||||||||||||||||||||    
T  2263573 ggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatc 2263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 7487326 - 7487254
Alignment:
Q  350 ttaaagggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||| |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  7487326 ttaaaaggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 7487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 15016632 - 15016566
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  15016632 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 15016566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 39355035 - 39355101
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  39355035 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 39355101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 43822409 - 43822446
Alignment:
Q  411 aaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  43822409 aaccatcagatctagtgtacacgtgtgataatcctagg 43822446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 442
Target Start/End: Complemental strand, 36636960 - 36636916
Alignment:
Q  398 ataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    |||||||||||||||||||||||| |  | |||||||||||||||    
T  36636960 ataaacacttcacaaccatcagatttgttttacacgtgtaataat 36636916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 7e-38; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 18056784 - 18056880
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 18056880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 22348039 - 22348135
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttc 22348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 16115851 - 16115937
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    ||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  16115851 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataat 16115937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 37639371 - 37639438
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  37639371 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattatagacttc 37639438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 353 - 452
Target Start/End: Complemental strand, 23320161 - 23320054
Alignment:
Q  353 aagggcaaaagttatagtgcataaggaaatctttatgcac--------cgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattc 444  Q
    ||||||||||||||| ||||||||||||||| |||||| |        | || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  23320161 aagggcaaaagttatggtgcataaggaaatccttatgctcttaggtatcatgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcc 23320062  T
Q  445 taggcttc 452  Q
    ||| ||||    
T  23320061 tagacttc 23320054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 45889596 - 45889692
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||| ||| ||||||||||||||  |||| ||||||| ||||||| || |||||||||||||||||| |||| ||||||||||  ||||||||    
T  45889596 ggcaaaaggtatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttc 45889692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 35198217 - 35198155
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctag 447  Q
    ||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  35198217 ttatgcaccctgcataaacacttcacagccatcagatctagtgtacacgtgtaataatcctag 35198155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 442
Target Start/End: Original strand, 179650 - 179694
Alignment:
Q  398 ataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  179650 ataaacacttcacaaccatcagatctagtgtacacgtgtaataat 179694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 8402369 - 8402284
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    |||||||||||| ||| |||||||||| ||||||||       ||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  8402369 ggcaaaagttatggtggataaggaaatttttatgca-------taaacacttcataaccatcagatctagtgtacacatgtaataatcctagg 8402284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 421
Target Start/End: Complemental strand, 23921964 - 23921898
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| ||||||||||||||| ||||||| |||| |||| ||||||| |||||||||||    
T  23921964 gggcaaaagttattgtgcataaggaaatccttatgcatcgtgcataagcacttcataaccatcagat 23921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 452
Target Start/End: Original strand, 30802438 - 30802492
Alignment:
Q  398 ataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  30802438 ataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttc 30802492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 28375463 - 28375530
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| |||||||||  | | |||||||||||||| |||||||| |||||||||||||||    
T  28375463 gggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagat 28375530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 11421624 - 11421660
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11421624 ttatgcaccgtgcataaacacttcacaaccatcagat 11421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 16975984 - 16976020
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||||||||||| |||||||||||||||    
T  16975984 ttatgcaccgtgtataaacacatcacaaccatcagat 16976020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 34369690 - 34369726
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34369690 ttatgcaccgtgcataaacacttcacaaccatcagat 34369726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 418
Target Start/End: Complemental strand, 4097974 - 4097911
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatca 418  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||||||||||||||||    
T  4097974 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatca 4097911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 24635926 - 24635992
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  24635926 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 24635992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 25889094 - 25889028
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  25889094 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 25889028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 402
Target Start/End: Complemental strand, 46590800 - 46590762
Alignment:
Q  364 ttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  46590800 ttatggtgcataaggaaatctttatgcaccctgtataaa 46590762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 49937003 - 49936937
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  49937003 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 49936937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 50351803 - 50351869
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  50351803 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 50351869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 18618865 - 18618901
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  18618865 ttatgcaccgtgcataaacacatcacaaccatcagat 18618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 31529701 - 31529665
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  31529701 ttatgcaccatgcataaacacttcacaaccatcagat 31529665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 33097435 - 33097471
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  33097435 ttatgcaccctgcataaacacttcacaaccatcagat 33097471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 44260548 - 44260584
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  44260548 ttatgcaccctgcataaacacttcacaaccatcagat 44260584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 354 - 452
Target Start/End: Complemental strand, 33346438 - 33346340
Alignment:
Q  354 agggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  33346438 agggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttc 33346340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 34399641 - 34399737
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatcctaggcttc 34399737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 29157225 - 29157322
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||||  |||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  29157225 gggcaaaagttatcatgcacaaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttc 29157322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 15035040 - 15034944
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||   |||||||||||||||||||||||||| ||||||||||  ||||||||    
T  15035040 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataatcataggcttc 15034944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 24737726 - 24737660
Alignment:
Q  386 tatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 24737660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 18611215 - 18611285
Alignment:
Q  382 tctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  18611215 tctttatgcactctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttc 18611285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 354 - 431
Target Start/End: Original strand, 35119237 - 35119310
Alignment:
Q  354 agggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtaca 431  Q
    |||||||||||||| |||||||||    || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  35119237 agggcaaaagttatggtgcataag----tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  359 aaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaacc 414  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  12394442 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 4101967 - 4102006
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  4101967 gttatagtgcataaggaaatgtttatgcaccgtgcataaa 4102006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 1449542 - 1449608
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  1449542 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 1449608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 1536962 - 1536896
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  1536962 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 1536896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 31216662 - 31216728
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  31216662 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 31216728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 421
Target Start/End: Complemental strand, 34870151 - 34870086
Alignment:
Q  357 gcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||| |||||||||  | | | ||||||||| ||||||||||| |||||||||||||||    
T  34870151 gcaaaagttatggtgcataagccatttccttatgcaccatgtataaacacatcacaaccatcagat 34870086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 442
Target Start/End: Original strand, 877250 - 877294
Alignment:
Q  398 ataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    ||||||||||||||||||| |||||  |||||||||| |||||||    
T  877250 ataaacacttcacaaccattagatcaggtgtacacgtataataat 877294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 6900833 - 6900869
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  6900833 ttatgcaccgtgcataaacacatcacaaccatcagat 6900869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 30428873 - 30428969
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  30428873 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 30428969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 355 - 460
Target Start/End: Original strand, 48690894 - 48690999
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcat 454  Q
    ||||||||||||| |||||||| |||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  48690894 gggcaaaagttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatcataggcttcat 48690993  T
Q  455 ctctac 460  Q
    ||||||    
T  48690994 ctctac 48690999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 28396722 - 28396829
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcatc 455  Q
    |||||||||||   |||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||||||| | |||||||| ||||||||||||    
T  28396722 ggcaaaagttacgatgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatcctaggcttcatc 28396821  T
Q  456 tctacaat 463  Q
    ||||||||    
T  28396822 tctacaat 28396829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 356 - 449
Target Start/End: Original strand, 12279745 - 12279838
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggc 449  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||| || ||||||    
T  12279745 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaatgatcctaggc 12279838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 46024027 - 46024123
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||| ||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  46024027 ggcaaaagttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttc 46024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 356 - 451
Target Start/End: Complemental strand, 15975001 - 15974906
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggctt 451  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||  |||||||    
T  15975001 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggctt 15974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 355 - 449
Target Start/End: Original strand, 12279640 - 12279734
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggc 449  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| || ||||||    
T  12279640 gggcaaaagttatggtacataaggaaatcattatgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaatgatcctaggc 12279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 46573536 - 46573469
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46573536 ttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 46573469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 48305231 - 48305343
Alignment:
Q  350 ttaaagggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggc 449  Q
    ||||| |||||||||||| |||||||||||  || |||||||||||| |||||||||| |||| |||| |||||||||||||||| ||||||| ||||      
T  48305231 ttaaatggcaaaagttatggtgcataaggat-tccttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataatcctagtt 48305329  T
Q  450 ttcatctctacaat 463  Q
    ||||||||||||||    
T  48305330 ttcatctctacaat 48305343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 48691038 - 48691099
Alignment:
Q  402 acacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcatctctacaat 463  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48691038 acacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcatctctacaat 48691099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 5757416 - 5757483
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  5757416 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttc 5757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 452
Target Start/End: Original strand, 33797966 - 33798027
Alignment:
Q  391 accgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  33797966 accgtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttc 33798027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 44141287 - 44141230
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    ||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||    
T  44141287 ttatgcaccctgcataaacacttcacaaccatctgatttagtgtacacgtgtaataat 44141230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 25778834 - 25778902
Alignment:
Q  353 aagggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||||| ||||||||| ||||  |||||||| ||| |||| |||||||||||||||||||    
T  25778834 aagggcaaaagttatggtgcataagaaaattcttatgcactgtgcataagcacttcacaaccatcagat 25778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 32090606 - 32090674
Alignment:
Q  384 tttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||| || ||||||| |||| |||||||| ||||||| |||||||||||||||  ||||||||    
T  32090606 tttatgcaccctgcataaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttc 32090674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 763694 - 763763
Alignment:
Q  353 aagggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  763694 aagggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagat 763763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Complemental strand, 16933311 - 16933244
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  16933311 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 16933244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Complemental strand, 16938694 - 16938627
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  16938694 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 16938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 31660068 - 31660135
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  31660068 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 31660135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 30884288 - 30884222
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  30884288 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 30884222  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 41911175 - 41911109
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  41911175 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 41911109  T

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Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 46358520 - 46358586
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  46358520 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46358586  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 20000710 - 20000674
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  20000710 ttatgcaccgtgcataaacacatcacaaccatcagat 20000674  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 27335664 - 27335625
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctag 425  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  27335664 ttatgcacc-tgcataaacacttcacaaccatcagatctag 27335625  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 34875519 - 34875555
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    ||||||||| || ||||||||||||||||||||||||    
T  34875519 ttatgcaccctgcataaacacttcacaaccatcagat 34875555  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 46346752 - 46346712
Alignment:
Q  385 ttatgcaccgtgtataaacacttcacaaccatcagatctag 425  Q
    ||||||| | |||||||||||||||||||||||| ||||||    
T  46346752 ttatgcatcctgtataaacacttcacaaccatcatatctag 46346712  T

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Target: scaffold0097 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 13613 - 13709
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    |||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  13613 ggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttc 13709  T

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Target: scaffold0238 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 25297 - 25211
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataat 442  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  25297 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataat 25211  T

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Target: scaffold0337 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 448
Target Start/End: Original strand, 7020 - 7109
Alignment:
Q  359 aaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  7020 aaaagttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctagg 7109  T

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Target: scaffold0194 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 27606 - 27703
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttc 452  Q
    ||||||||||||| |||||||||||||   ||||| |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  27606 gggcaaaagttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttc 27703  T

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Target: scaffold0544 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 10739 - 10648
Alignment:
Q  357 gcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 448  Q
    ||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||  ||||||||| |||||    
T  10739 gcaaaagttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatcctagg 10648  T

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Target: scaffold0189 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 11256 - 11193
Alignment:
Q  355 gggcaaaagttatagtgcataaggaaatctttatgcaccgtgtataaacacttcacaaccatca 418  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| |||| ||||||||||||||||    
T  11256 gggcaaaagttatggtgcataaggaaatccttatgcactgtgcataagcacttcacaaccatca 11193  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 33856 - 33817
Alignment:
Q  363 gttatagtgcataaggaaatctttatgcaccgtgtataaa 402  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  33856 gttatggtgcataaggaaatctttatgcaccgtgcataaa 33817  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 33684 - 33750
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  33684 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 33750  T

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Target: scaffold0571 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 742 - 676
Alignment:
Q  356 ggcaaaagttatagtgcataaggaaat-ctttatgcaccgtgtataaacacttcacaaccatcagat 421  Q
    |||||||||||| |||||||||  | | | |||||||||||| |||||||| |||||||||||||||    
T  742 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 676  T

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