View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4568_high_31 (Length: 311)
Name: NF4568_high_31
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4568_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 13 - 291
Target Start/End: Complemental strand, 40999076 - 40998798
Alignment:
| Q |
13 |
catcatcattagagtttcaaatgatttttaagtaatagtatatcttagggttgtagaaatgtttaaaaataacaaaactcacatctcatgggtcattttc |
112 |
Q |
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| T |
40999076 |
catcatcgttagagtttcaaatgatttttaagtaatagtatatcttagggttgtagaaatgtttaaaaataacaaaactcacatctcatgggtcattttc |
40998977 |
T |
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| Q |
113 |
atctaaacaagaaaaggaggaattgaaataagtaggcttttggttgattgaaattgtgggattattatggcattgaatatttctatgtgcagtggtcaat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
40998976 |
atctaaacaagaaaaggaggaattgaaataagtaggcttttggttgattgaaattgtgggattattatggcattgaatatttgtatgtgcagtggtcaat |
40998877 |
T |
|
| Q |
213 |
ttcatcttaattatcttaaggatagcttagttaagattaagttagccaatcataaaacacaattgtggaatatcgagtc |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40998876 |
ttcatcttaattatcttaaggatagcttagttaagattaagttagccaatcataaaacacaattgtggaatatcgagtc |
40998798 |
T |
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