View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4568_high_51 (Length: 250)
Name: NF4568_high_51
Description: NF4568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4568_high_51 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 21 - 250
Target Start/End: Original strand, 659401 - 659630
Alignment:
| Q |
21 |
gtaattacaattaggctaaaatttaatactcctacaacaaccatcattaattaatcattattaaggctaagacattttccggggcggattagattattca |
120 |
Q |
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| T |
659401 |
gtaattacaattaggctaaaatttaatactcctacaacaaccatcattagttaatcattattaaggctaagacattttccggggcggattagattattca |
659500 |
T |
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| Q |
121 |
aaatcaacacctgaatagttggtctaacacatatcaaagttatcaaacttaggttcaaattaggccctaatgtttagcctatcccagaataagaatttgg |
220 |
Q |
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| T |
659501 |
aaatcaacacctgaatagttggtctaacacatatcaaagttatcaaacttaggttcaaattaggccctaatgtttagcctatcccagaataagaatttgg |
659600 |
T |
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| Q |
221 |
aaaaatgaataagtataatcaatccctcac |
250 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
659601 |
aaaaatgaataagtataatcaatccctcac |
659630 |
T |
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