View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4569_low_1 (Length: 386)

Name: NF4569_low_1
Description: NF4569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4569_low_1
NF4569_low_1
[»] chr1 (37 HSPs)
chr1 (17-283)||(32965949-32966215)
chr1 (319-376)||(40596051-40596108)
chr1 (319-376)||(41507191-41507248)
chr1 (319-367)||(5477169-5477217)
chr1 (319-375)||(45065899-45065955)
chr1 (319-367)||(49453497-49453545)
chr1 (319-367)||(51571421-51571469)
chr1 (319-373)||(27687519-27687573)
chr1 (319-373)||(40139132-40139186)
chr1 (319-376)||(50797797-50797854)
chr1 (319-367)||(14983790-14983838)
chr1 (337-373)||(32960384-32960420)
chr1 (319-367)||(45272166-45272214)
chr1 (337-373)||(49570032-49570068)
chr1 (337-373)||(49931589-49931625)
chr1 (341-376)||(12489578-12489613)
chr1 (319-376)||(3826812-3826869)
chr1 (319-376)||(5975554-5975611)
chr1 (343-376)||(26547275-26547308)
chr1 (319-376)||(29293965-29294022)
chr1 (319-360)||(43612093-43612134)
chr1 (319-376)||(48256926-48256981)
chr1 (319-367)||(4637942-4637990)
chr1 (319-367)||(8200093-8200141)
chr1 (319-367)||(11597654-11597702)
chr1 (319-367)||(16836121-16836169)
chr1 (337-373)||(30536027-30536063)
chr1 (319-367)||(33358164-33358212)
chr1 (319-367)||(41558010-41558058)
chr1 (319-367)||(42539424-42539472)
chr1 (341-373)||(43893297-43893329)
chr1 (337-365)||(44723396-44723424)
chr1 (341-373)||(45470840-45470872)
chr1 (319-367)||(46903487-46903535)
chr1 (319-367)||(48220149-48220197)
chr1 (319-367)||(49241510-49241558)
chr1 (337-373)||(52437530-52437566)
[»] chr4 (29 HSPs)
chr4 (319-376)||(32365664-32365721)
chr4 (319-367)||(39241307-39241355)
chr4 (319-376)||(28676149-28676206)
chr4 (319-376)||(30778261-30778318)
chr4 (319-376)||(4511831-4511888)
chr4 (319-376)||(27384193-27384250)
chr4 (321-373)||(19232133-19232185)
chr4 (337-373)||(37060353-37060389)
chr4 (319-367)||(42490926-42490974)
chr4 (319-367)||(46173556-46173604)
chr4 (319-367)||(48326558-48326606)
chr4 (337-367)||(336813-336843)
chr4 (319-357)||(41119497-41119535)
chr4 (341-370)||(6239419-6239448)
chr4 (319-372)||(28899216-28899269)
chr4 (337-370)||(33860683-33860716)
chr4 (319-360)||(54036542-54036583)
chr4 (337-373)||(2401646-2401682)
chr4 (319-367)||(5386390-5386438)
chr4 (319-367)||(28657446-28657494)
chr4 (319-375)||(29974325-29974381)
chr4 (319-367)||(31657664-31657712)
chr4 (319-367)||(32621644-32621692)
chr4 (319-367)||(43769729-43769777)
chr4 (337-373)||(44257729-44257765)
chr4 (337-373)||(45761244-45761280)
chr4 (319-367)||(46686251-46686298)
chr4 (337-373)||(50890073-50890109)
chr4 (321-373)||(51930846-51930898)
[»] chr8 (28 HSPs)
chr8 (319-367)||(5502377-5502425)
chr8 (319-376)||(37392125-37392182)
chr8 (321-373)||(16011917-16011969)
chr8 (322-365)||(36178268-36178311)
chr8 (337-375)||(3946276-3946314)
chr8 (319-376)||(11138913-11138970)
chr8 (333-373)||(888256-888296)
chr8 (319-367)||(1796502-1796550)
chr8 (319-367)||(14710899-14710947)
chr8 (319-367)||(30925660-30925708)
chr8 (319-375)||(32954858-32954914)
chr8 (319-375)||(37657007-37657063)
chr8 (319-373)||(157073-157127)
chr8 (319-373)||(1370285-1370339)
chr8 (321-367)||(44103784-44103830)
chr8 (337-370)||(41600345-41600378)
chr8 (337-373)||(3270878-3270914)
chr8 (337-373)||(6440117-6440153)
chr8 (319-359)||(9047084-9047124)
chr8 (337-373)||(25830245-25830281)
chr8 (319-367)||(30439511-30439559)
chr8 (341-373)||(34996360-34996392)
chr8 (337-373)||(35067196-35067232)
chr8 (319-367)||(37524434-37524482)
chr8 (319-367)||(39211059-39211107)
chr8 (337-373)||(43285962-43285998)
chr8 (337-373)||(43715910-43715946)
chr8 (319-359)||(44607707-44607747)
[»] chr5 (24 HSPs)
chr5 (319-373)||(6865787-6865841)
chr5 (319-376)||(13734357-13734414)
chr5 (319-376)||(33910085-33910142)
chr5 (319-367)||(33567229-33567277)
chr5 (337-376)||(21922141-21922180)
chr5 (337-376)||(35473359-35473398)
chr5 (319-373)||(372720-372774)
chr5 (322-376)||(2117621-2117675)
chr5 (319-373)||(4098629-4098683)
chr5 (337-375)||(8920114-8920152)
chr5 (319-367)||(14206406-14206454)
chr5 (337-373)||(26686917-26686953)
chr5 (337-373)||(26956648-26956684)
chr5 (319-367)||(29227723-29227771)
chr5 (321-376)||(8725419-8725474)
chr5 (337-367)||(1079958-1079988)
chr5 (318-360)||(31284407-31284449)
chr5 (337-367)||(39628825-39628855)
chr5 (337-375)||(41173288-41173326)
chr5 (343-376)||(29803266-29803299)
chr5 (319-367)||(1839350-1839398)
chr5 (343-375)||(19437298-19437330)
chr5 (337-373)||(22098291-22098327)
chr5 (319-367)||(39458674-39458722)
[»] chr2 (25 HSPs)
chr2 (319-373)||(8482232-8482286)
chr2 (319-376)||(25801810-25801867)
chr2 (319-375)||(6646841-6646897)
chr2 (319-375)||(32972904-32972960)
chr2 (319-367)||(37966373-37966421)
chr2 (319-376)||(29795453-29795510)
chr2 (319-376)||(45202129-45202186)
chr2 (337-373)||(18737873-18737909)
chr2 (321-365)||(28013975-28014019)
chr2 (319-375)||(44018069-44018125)
chr2 (320-375)||(2971812-2971867)
chr2 (337-367)||(18876927-18876957)
chr2 (337-375)||(33045579-33045617)
chr2 (337-370)||(4384090-4384123)
chr2 (343-376)||(9449412-9449445)
chr2 (343-376)||(14954596-14954629)
chr2 (319-376)||(38600831-38600888)
chr2 (319-375)||(6511554-6511610)
chr2 (319-367)||(7121396-7121444)
chr2 (319-367)||(14891095-14891143)
chr2 (319-367)||(19695697-19695745)
chr2 (319-367)||(22353181-22353229)
chr2 (319-367)||(24727432-24727480)
chr2 (337-373)||(36774574-36774610)
chr2 (319-367)||(42081054-42081102)
[»] chr7 (26 HSPs)
chr7 (319-376)||(2469709-2469766)
chr7 (319-367)||(22330637-22330685)
chr7 (319-367)||(37351996-37352044)
chr7 (319-367)||(41985106-41985154)
chr7 (337-375)||(33224859-33224897)
chr7 (337-375)||(35586770-35586808)
chr7 (319-373)||(43444641-43444695)
chr7 (319-367)||(237030-237078)
chr7 (319-366)||(25887600-25887647)
chr7 (319-366)||(31274547-31274594)
chr7 (322-376)||(10619696-10619750)
chr7 (342-376)||(26123407-26123441)
chr7 (337-375)||(37899210-37899248)
chr7 (337-375)||(37899359-37899397)
chr7 (337-370)||(21204365-21204398)
chr7 (319-376)||(30180524-30180581)
chr7 (319-376)||(37856162-37856219)
chr7 (319-376)||(38547287-38547344)
chr7 (319-367)||(2323310-2323358)
chr7 (337-373)||(6269402-6269438)
chr7 (319-367)||(7817655-7817703)
chr7 (337-373)||(31711936-31711972)
chr7 (319-367)||(31785477-31785525)
chr7 (337-373)||(42584838-42584874)
chr7 (337-373)||(44496802-44496838)
chr7 (319-367)||(45420066-45420114)
[»] chr3 (21 HSPs)
chr3 (319-376)||(3484776-3484833)
chr3 (319-367)||(47683807-47683855)
chr3 (319-367)||(43169759-43169807)
chr3 (321-376)||(28884499-28884554)
chr3 (337-367)||(26550273-26550303)
chr3 (337-367)||(26772404-26772434)
chr3 (337-367)||(33939271-33939301)
chr3 (337-367)||(37302581-37302611)
chr3 (337-375)||(37780348-37780386)
chr3 (319-368)||(11056927-11056976)
chr3 (319-376)||(23906984-23907041)
chr3 (319-376)||(29846888-29846945)
chr3 (319-376)||(31997819-31997876)
chr3 (319-359)||(3483138-3483178)
chr3 (337-373)||(19150318-19150354)
chr3 (337-373)||(29917023-29917059)
chr3 (337-373)||(29966176-29966212)
chr3 (337-373)||(45293028-45293064)
chr3 (319-367)||(46952955-46953003)
chr3 (319-367)||(49761325-49761373)
chr3 (319-367)||(53871038-53871086)
[»] scaffold0054 (1 HSPs)
scaffold0054 (319-376)||(31597-31654)
[»] chr6 (12 HSPs)
chr6 (319-376)||(12441544-12441601)
chr6 (319-375)||(28748130-28748186)
chr6 (321-360)||(32149508-32149547)
chr6 (337-367)||(8505779-8505809)
chr6 (337-367)||(11635540-11635570)
chr6 (322-376)||(12177586-12177640)
chr6 (337-367)||(32459522-32459552)
chr6 (319-373)||(32644629-32644683)
chr6 (319-360)||(2163708-2163749)
chr6 (319-360)||(2175341-2175382)
chr6 (337-373)||(13423004-13423040)
chr6 (341-373)||(25338077-25338109)
[»] scaffold0155 (1 HSPs)
scaffold0155 (319-371)||(3273-3325)
[»] scaffold0100 (1 HSPs)
scaffold0100 (319-375)||(44792-44848)
[»] scaffold0003 (1 HSPs)
scaffold0003 (337-367)||(366329-366359)
[»] scaffold0286 (1 HSPs)
scaffold0286 (319-360)||(18660-18701)


Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-146; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 32965949 - 32966215
Alignment:
Q  17 attatgtgtatataaggagaagggagaagagtgaagaaacctaggtggtgtataaatgaggatggtgatggggaaggagacagaacattaaaatgttgtg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32965949 attatgtgtatataaggagaagggagaagagtgaagaaacctaggtggtgtataaatgaggatggtgatggggaaggagacagaacattaaaatgttgtg 32966048  T
Q  117 aaagactgtttttattttattaaggttggagtgtggatactacgtagttgttggtgaattttctcagtggttttcagagacttctggctagaaatttgtt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32966049 aaagactgtttttattttattaaggttggagtgtggatactacgtagttgttggtgaattttctcagtggttttcagagacttctggctagaaatttgtt 32966148  T
Q  217 ccacaaagagtgtctcgatcaatgtttaatattttatatataggactattttattatatactttgta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32966149 ccacaaagagtgtctcgatcaatgtttaatattttatatataggagtattttattatatactttgta 32966215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 40596108 - 40596051
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||    
T  40596108 tgatatttgtacaaccattttgtgacaactttctctctcatactcacattatattctt 40596051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 41507248 - 41507191
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||| || |||||    
T  41507248 tgatatttgtacaaccattttgtgacaactttctctctcatactcacattatgttctt 41507191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 5477217 - 5477169
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  5477217 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 5477169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 45065955 - 45065899
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||||||||||    
T  45065955 tgatatttgaacatccattttgtgacaactttctctctcatactcacatcatattct 45065899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 49453497 - 49453545
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  49453497 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 49453545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 51571421 - 51571469
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  51571421 tgatatttgtacaaccactttttgacaactttctctctcatattcacat 51571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 27687573 - 27687519
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| |||||||||||||| ||||||||| |||||| |||||    
T  27687573 tgatatttgtacaaccattttgtgacaactttatctctcatactcacattatatt 27687519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 40139132 - 40139186
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| |||||    
T  40139132 tgatatttgtacaaccattttatgacaactttctctctcatactcacattatatt 40139186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 50797797 - 50797854
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| ||| || |||||||||||||||||||||||| |||||| | ||||||    
T  50797797 tgatatttgtacaatcattttgtgacaactttctctctcatactcacatgacattctt 50797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 14983790 - 14983838
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| | |||||||||||||||||||||||||    
T  14983790 tgatatttgtacaaccactttttaacaactttctctctcatattcacat 14983838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 32960384 - 32960420
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32960384 tttgtgacaactttctctctcatattcacattatatt 32960420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 45272214 - 45272166
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  45272214 tgatatttgtacaaccactttttgacaactttctctctcatactcacat 45272166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 49570032 - 49570068
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  49570032 tttgtgacaactttctctctcatattcacattatatt 49570068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 49931589 - 49931625
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  49931589 tttgtgacaactttctctctcatattcacattatatt 49931625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 376
Target Start/End: Complemental strand, 12489613 - 12489578
Alignment:
Q  341 tgacaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12489613 tgacaactttctctctcatattcacattatattctt 12489578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 3826869 - 3826812
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||| ||||| | |||||||| |||||||||||||||| || |||||    
T  3826869 tgatatttgtacaactaatttttaacaactttatctctcatattcacattatcttctt 3826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 5975554 - 5975611
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||| ||| || ||| ||| |||||||||||||||||||| |||||| ||||||||    
T  5975554 tgatatatgtacatccactttttgacaactttctctctcatactcacattatattctt 5975611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 26547275 - 26547308
Alignment:
Q  343 acaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||||||||||||||||| ||||||||    
T  26547275 acaactttctctctcatattcacataatattctt 26547308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 29293965 - 29294022
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||| | ||| |||||||||||||||||||| |||||| ||| ||||    
T  29293965 tgatatttgtacaactactttatgacaactttctctctcatagtcacattatactctt 29294022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 43612134 - 43612093
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    |||||||||| |||||| ||| ||||||||||||||||||||    
T  43612134 tgatatttgtacaaccattttatgacaactttctctctcata 43612093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 48256926 - 48256981
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||||| || |||||    
T  48256926 tgatatttgtacaacca-tttgt-acaactttctctctcatattcacattatcttctt 48256981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 4637942 - 4637990
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||||| |||||||||||||| ||||| ||||    
T  4637942 tgatatttgtacaaccattttgtaacaactttctctcttatatttacat 4637990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 8200093 - 8200141
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  8200093 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 8200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 11597654 - 11597702
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||| ||| |||||||||||||||||||||||||  |||| ||||||    
T  11597654 tgatatctgtacaaccaatttgtgacaactttctctgccatactcacat 11597702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 16836169 - 16836121
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| || |||||||||||||| ||||||||| ||||||    
T  16836169 tgatatttgtacaatcattttgtgacaactttttctctcatactcacat 16836121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 30536027 - 30536063
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  30536027 tttgtgacaactttctctctcatactcacattatatt 30536063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 33358212 - 33358164
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  33358212 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 33358164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 41558010 - 41558058
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||||||||||||  |||||||||| ||||||    
T  41558010 tgatatttgtacaaccattttgtgacaactcactctctcatactcacat 41558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 42539424 - 42539472
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| | |||||||||||||||||||| | ||||||    
T  42539424 tgatatttgtacaaccattatgtgacaactttctctctcagactcacat 42539472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 43893297 - 43893329
Alignment:
Q  341 tgacaactttctctctcatattcacatcatatt 373  Q
    |||||| ||||||||||||||||||||||||||    
T  43893297 tgacaattttctctctcatattcacatcatatt 43893329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 365
Target Start/End: Original strand, 44723396 - 44723424
Alignment:
Q  337 tttgtgacaactttctctctcatattcac 365  Q
    |||||||||||||||||||||||||||||    
T  44723396 tttgtgacaactttctctctcatattcac 44723424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 45470872 - 45470840
Alignment:
Q  341 tgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||| |||||    
T  45470872 tgacaactttctctctcatattcacattatatt 45470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 46903487 - 46903535
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||||  |||||||||||||||||| ||||||    
T  46903487 tgatatttgtacaaccattttgatacaactttctctctcatactcacat 46903535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 48220197 - 48220149
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  48220197 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 48220149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 49241558 - 49241510
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  49241558 tgatatttgaacatccactttgtgacaactttctctctcatactcacat 49241510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 52437530 - 52437566
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  52437530 tttgtgacaactttctctctcatactcacattatatt 52437566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 32365721 - 32365664
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| || |||||    
T  32365721 tgatatttgtacaaccattttgtgacaactttctctctcatattcacatgatgttctt 32365664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 39241355 - 39241307
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  39241355 tgatatttgtacaaccaatttgtgacaactttctctctcatactcacat 39241307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 28676206 - 28676149
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||||||||||||||||| ||||| |||||| ||||||||    
T  28676206 tgatatttgtacaaccattttgtgacaactttctctttcatactcacattatattctt 28676149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 30778318 - 30778261
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| || |||||||||||||||||||||||||||| |||||| ||| ||||    
T  30778318 tgatatttgtacagccaatttgtgacaactttctctctcatactcacattatactctt 30778261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 4511831 - 4511888
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||  ||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  4511831 tgatatttgtataaccattttatgacaactttctctctcatactcacattatattctt 4511888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 27384193 - 27384250
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||| | |||||||||||||||||||||| || ||||||||    
T  27384193 tgatatttgtacaaccattttattacaactttctctctcatattcatattatattctt 27384250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 19232185 - 19232133
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||| |||||||||| ||||||| |||||||||||| |||||| |||||    
T  19232185 atatttgtacaaccaatttttgacaaccttctctctcatactcacattatatt 19232133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 37060353 - 37060389
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  37060353 tttgtgacaactttctctctcatattcacattatatt 37060389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 42490926 - 42490974
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  42490926 tgatatttgtacaaccactttttgacaactttctctctcatactcacat 42490974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 46173556 - 46173604
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||||||||||||||||||||| || ||||||    
T  46173556 tgatatttgtacaaccactttgtgacaactttctctctcgtactcacat 46173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 48326558 - 48326606
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||| ||||||||| ||||||    
T  48326558 tgatatttgtacaaccactttgtgacaactttttctctcatactcacat 48326606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Complemental strand, 336843 - 336813
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  336843 tttgtgacaactttctctctcatattcacat 336813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 41119535 - 41119497
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctc 357  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  41119535 tgatatttgtacaaccactttgtgacaactttctctctc 41119497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 370
Target Start/End: Original strand, 6239419 - 6239448
Alignment:
Q  341 tgacaactttctctctcatattcacatcat 370  Q
    ||||||||||||||||||||||||||||||    
T  6239419 tgacaactttctctctcatattcacatcat 6239448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 28899269 - 28899216
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatat 372  Q
    |||||||||| ||| || ||||  ||||||||||||||||||||||||| ||||    
T  28899269 tgatatttgtacaatcattttggtacaactttctctctcatattcacattatat 28899216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 33860683 - 33860716
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcat 370  Q
    |||||||||||||||||||||||| |||||||||    
T  33860683 tttgtgacaactttctctctcatactcacatcat 33860716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 54036583 - 54036542
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    |||||||||| |||||| |||||||||||||| |||||||||    
T  54036583 tgatatttgtacaaccattttgtgacaactttatctctcata 54036542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 2401646 - 2401682
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  2401646 tttgtgacaactttatctctcatactcacatcatatt 2401682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 5386390 - 5386438
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  |||||| ||| |||||||||||||||||||| ||||||    
T  5386390 tgatatttgaacaaccattttttgacaactttctctctcatactcacat 5386438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 28657494 - 28657446
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  28657494 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 28657446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 29974381 - 29974325
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  |||| | |||||||||||||||||| ||||| ||||||| ||||||    
T  29974381 tgatatttgaacaactattttgtgacaactttctctttcatactcacatcctattct 29974325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 31657664 - 31657712
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  31657664 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 31657712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 32621644 - 32621692
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  |||||| |||||||||||||||||||| ||| ||||||    
T  32621644 tgatatttgcacaaccattttgtgacaactttctctctaatactcacat 32621692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 43769729 - 43769777
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  43769729 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 43769777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 44257765 - 44257729
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  44257765 tttgtgacaactttctctctcatactcacattatatt 44257729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 45761280 - 45761244
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||||||| || |||||    
T  45761280 tttgtgacaactttctctctcatattcatattatatt 45761244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 46686251 - 46686298
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||||| |||||||||||||||||| ||||||    
T  46686251 tgatatttgtacaaccattttgt-acaactttctctctcatactcacat 46686298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 50890109 - 50890073
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  50890109 tttgtgacaactttctctctcatactcacattatatt 50890073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 51930846 - 51930898
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||| |||||||||| ||||||  |||||||||||| |||||| |||||    
T  51930846 atatttgtacaaccaatttttgacaaaattctctctcatactcacattatatt 51930898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 5502377 - 5502425
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  5502377 tgatatttgtacaaccactttgtgacaactttctctctcatattcacat 5502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 37392182 - 37392125
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  37392182 tgatatttgtacaaccattttttgacaactttctctctcatactcacattatattctt 37392125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 16011969 - 16011917
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||| |||||    
T  16011969 atatttgtacaaccactttgtgacaaatttctctctcatattcacattatatt 16011917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 36178311 - 36178268
Alignment:
Q  322 tatttgtccaaccaatttgtgacaactttctctctcatattcac 365  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||    
T  36178311 tatttgtacaaccaatttgtgacaactttctctctcatactcac 36178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 3946276 - 3946314
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  3946276 tttgtgacaactttctctctcatactcacatcatattct 3946314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 11138913 - 11138970
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||| | |||||||||||||||||||||||| ||| || ||||||||    
T  11138913 tgatatttgtacaactattttgtgacaactttctctctcatactcatatgatattctt 11138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 888296 - 888256
Alignment:
Q  333 ccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  888296 ccaatttgtgacaactttctttctcatattcacatgatatt 888256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 1796502 - 1796550
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||| ||||||| ||||||    
T  1796502 tgatatttgtacaaccactttgtgacaactttctttctcatactcacat 1796550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 14710947 - 14710899
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| || |||||||||||||||||||||||| ||||||    
T  14710947 tgatatttgtacaatcattttgtgacaactttctctctcatactcacat 14710899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 30925708 - 30925660
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  ||||| |||| |||||||||||||||||||||||||||    
T  30925708 tgatatttggacaaccgatttatgacaactttctctctcatattcacat 30925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 32954858 - 32954914
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||||||||||||| ||| ||||||||||||||    
T  32954858 tgatatttgaacatccattttgtgacaactttctctctgatactcacatcatattct 32954914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 37657007 - 37657063
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| || ||||||||||||||||||||| ||||||||||||||    
T  37657007 tgatatttgaacatccatttagtgacaactttctctctcatactcacatcatattct 37657063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 157073 - 157127
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| |||| ||||||||||||||||||| | |||| |||||    
T  157073 tgatatttgtacaaccattttgcgacaactttctctctcatacttacattatatt 157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 1370339 - 1370285
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| ||||| ||||||||||||| |||| |||||| |||||    
T  1370339 tgatatttgtacaaccactttgtaacaactttctctcacatactcacattatatt 1370285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 367
Target Start/End: Original strand, 44103784 - 44103830
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  44103784 atatttgtacaaccactttatgacaactttctctctcatactcacat 44103830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 41600345 - 41600378
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcat 370  Q
    |||||||||||||||||||||||| |||||||||    
T  41600345 tttgtgacaactttctctctcatactcacatcat 41600378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 3270914 - 3270878
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3270914 tttgtgacaactttctctctaatattcacattatatt 3270878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 6440117 - 6440153
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  6440117 tttgtgacaactttctctctcatactcacattatatt 6440153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 9047124 - 9047084
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcat 359  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  9047124 tgatatttgtacaaccactttttgacaactttctctctcat 9047084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 25830281 - 25830245
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  25830281 tttgtgacaactttctctctcatactcacattatatt 25830245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 30439559 - 30439511
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  30439559 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 30439511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 34996392 - 34996360
Alignment:
Q  341 tgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||| |||||    
T  34996392 tgacaactttctctctcatattcacattatatt 34996360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 35067196 - 35067232
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  35067196 tttgtgacaactttctctctcatactcacattatatt 35067232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 37524482 - 37524434
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| || ||||||||||||||||||| |||| ||||||    
T  37524482 tgatatttgtacaagcactttgtgacaactttctctcacatactcacat 37524434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 39211059 - 39211107
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  |||||| ||| |||||||||||||||||||| ||||||    
T  39211059 tgatatttgaacaaccattttttgacaactttctctctcatactcacat 39211107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 43285998 - 43285962
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  43285998 tttgtgacaactttctctctcatactcacattatatt 43285962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 43715910 - 43715946
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  43715910 tttgtgacaactttctctctcatactcacattatatt 43715946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 44607707 - 44607747
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcat 359  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  44607707 tgatatttgtacaaccatttggtgacaactttctctctcat 44607747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 6865841 - 6865787
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||| |||||    
T  6865841 tgatatttgtacaaccactttgtgacaactttctctctcatactcacataatatt 6865787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 13734414 - 13734357
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  13734414 tgatatttgtacaaccactttatgacaactttctctctcatactcacattatattctt 13734357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 33910142 - 33910085
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  33910142 tgatatttgttcaaccattttttgacaactttctctctcatactcacattatattctt 33910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 33567277 - 33567229
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  33567277 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 33567229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 376
Target Start/End: Complemental strand, 21922180 - 21922141
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21922180 tttgtgacaactttctctctcatactcacatcatattctt 21922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 376
Target Start/End: Original strand, 35473359 - 35473398
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  35473359 tttgtgacaactttctctctcatattcatatcatattctt 35473398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 372774 - 372720
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||| ||||| |||||| |||||||||||||||||||||||| |||||| |||||    
T  372774 tgatttttgtacaaccattttgtgacaactttctctctcatactcacatgatatt 372720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 2117675 - 2117621
Alignment:
Q  322 tatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    ||||||| |||| | |||||||||||||||||||||||| |||||| ||||||||    
T  2117675 tatttgtacaacaactttgtgacaactttctctctcatactcacattatattctt 2117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 4098629 - 4098683
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||| | |||||||||||||| |||||||||||||| |||||||    
T  4098629 tgatatttgtacaactattttgtgacaactttatctctcatattcacgtcatatt 4098683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 8920114 - 8920152
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8920114 tttgtgacaactttctctctcatactcacatcatattct 8920152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 14206406 - 14206454
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  14206406 tgatatttgtacaaccattttttgacaactttctctctcatactcacat 14206454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 26686917 - 26686953
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  26686917 tttgtgacaactttctctctcatattcacattatatt 26686953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 26956648 - 26956684
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  26956648 tttgtgacaactttctctctcatattcacattatatt 26956684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 29227723 - 29227771
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||| | |||||||||||||||||||||||| ||||||    
T  29227723 tgatatttgtacaactactttgtgacaactttctctctcatactcacat 29227771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 8725474 - 8725419
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||| |||||| ||| | |||||||||||||||||| |||||| ||||||||    
T  8725474 atatttgtacaaccactttattacaactttctctctcatactcacattatattctt 8725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Complemental strand, 1079988 - 1079958
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  1079988 tttgtgacaactttctctctcatattcacat 1079958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 31284449 - 31284407
Alignment:
Q  318 ctgatatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    ||||||||||| || ||| ||||||||||||||||||||||||    
T  31284449 ctgatatttgtacatccattttgtgacaactttctctctcata 31284407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 39628825 - 39628855
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  39628825 tttgtgacaactttctctctcatattcacat 39628855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 41173288 - 41173326
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  41173288 tttgtaacaactttctctctcatactcacatcatattct 41173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 29803266 - 29803299
Alignment:
Q  343 acaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||||||||||||||||| ||||||||    
T  29803266 acaactttctctctcatattcacattatattctt 29803299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 1839398 - 1839350
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  1839398 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 1839350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 375
Target Start/End: Original strand, 19437298 - 19437330
Alignment:
Q  343 acaactttctctctcatattcacatcatattct 375  Q
    ||||||||||||||||||||||||| |||||||    
T  19437298 acaactttctctctcatattcacattatattct 19437330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 22098291 - 22098327
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  22098291 tttgtgacaactttctctctcatactcacattatatt 22098327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 39458674 - 39458722
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||| ||| |||||| ||| |||||||||||||||||||| ||||||    
T  39458674 tgatatctgtacaaccagtttttgacaactttctctctcatactcacat 39458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 8482286 - 8482232
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||    
T  8482286 tgatatttgtacaaccactttatgacaactttctctctcatattcacattatatt 8482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 25801867 - 25801810
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||||| ||| ||||    
T  25801867 tgatatttgtacaaccaatttgtgacaactttatctctcatactcacattatactctt 25801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 6646841 - 6646897
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||||||||||    
T  6646841 tgatatttgaacatccattttgtgacaactttctctctcatactcacatcatattct 6646897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 32972960 - 32972904
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||||||||||    
T  32972960 tgatatttgaacatccattttgtgacaactttctctctcatactcacatcatattct 32972904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 37966373 - 37966421
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  37966373 tgatatttgtacaaccaatttgtgacaactttttctctcatactcacat 37966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 29795453 - 29795510
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||||||||||||||||||| |||| |||||| ||| ||||    
T  29795453 tgatatttgtacaaccattttgtgacaactttctctcacatactcacattatactctt 29795510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 45202186 - 45202129
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||| || |||||    
T  45202186 tgatatttgtacaaccatttttttacaactttctctctcatattcacattatcttctt 45202129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 18737909 - 18737873
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18737909 tttgtgacaactttctctctcatattcacattatatt 18737873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 28013975 - 28014019
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcac 365  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||    
T  28013975 atatttgtacaaccaatttttgacaactttctctctcatactcac 28014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 44018069 - 44018125
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||| |||||| |||||||||||||| || |||||| ||||||||| ||||    
T  44018069 tgatatttgtacaaccattttgtgacaactttttcactcatactcacatcatgttct 44018125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 2971867 - 2971812
Alignment:
Q  320 gatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    ||||||||  || ||| |||||||||||||||||||||||| ||| ||||||||||    
T  2971867 gatatttgaacatccattttgtgacaactttctctctcatactcatatcatattct 2971812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Complemental strand, 18876957 - 18876927
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  18876957 tttgtgacaactttctctctcatattcacat 18876927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 33045579 - 33045617
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  33045579 tttgtaacaactttctctctcatactcacatcatattct 33045617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 4384090 - 4384123
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcat 370  Q
    |||||||||||||||||||||||| |||||||||    
T  4384090 tttgtgacaactttctctctcatactcacatcat 4384123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 9449445 - 9449412
Alignment:
Q  343 acaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||||||||||||||||| ||||||||    
T  9449445 acaactttctctctcatattcacattatattctt 9449412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 14954629 - 14954596
Alignment:
Q  343 acaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||||||||||||||||| ||||||||    
T  14954629 acaactttctctctcatattcacataatattctt 14954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 38600831 - 38600888
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||| ||| || ||| ||| |||||||||||||||||||| |||||| ||||||||    
T  38600831 tgatatatgtacatccattttttgacaactttctctctcatactcacattatattctt 38600888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 6511610 - 6511554
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||| ||||||||||||||| |||| |||||||    
T  6511610 tgatatttggacatccattttgtgacaattttctctctcatatttacattatattct 6511554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 7121396 - 7121444
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    ||||||||||  ||||| ||||| |||||||||||||||||| ||||||    
T  7121396 tgatatttgtataaccattttgtaacaactttctctctcatactcacat 7121444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 14891143 - 14891095
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||| | ||||||| |||||||| ||||||||||||||    
T  14891143 tgatatttgtacaactattttgtgataactttctttctcatattcacat 14891095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 19695745 - 19695697
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| || ||| |||||||||||||||| ||||||||||    
T  19695745 tgatatttgtacaatcactttttgacaactttctctcttatattcacat 19695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 22353229 - 22353181
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| || |||||||||||||||| ||||||| ||||||    
T  22353229 tgatatttgtacaatcattttgtgacaactttctttctcatactcacat 22353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 24727432 - 24727480
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||||  |||||||||||||||||| ||||||    
T  24727432 tgatatttgtacaaccattttggtacaactttctctctcatactcacat 24727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 36774574 - 36774610
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||| |||||||||||||||||||||||||| |||||    
T  36774574 tttgagacaactttctctctcatattcacattatatt 36774610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 42081054 - 42081102
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| || ||| ||| |||||||||||||||||||| ||||||    
T  42081054 tgatatttgtacagccactttttgacaactttctctctcatactcacat 42081102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 2469709 - 2469766
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||  |||||||    
T  2469709 tgatatttgtacaaccactttgtgacaactttctctctcatactcacattgtattctt 2469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 22330685 - 22330637
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  22330685 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 22330637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 37352044 - 37351996
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  37352044 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 37351996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 41985154 - 41985106
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  41985154 tgatatttgtacaatcaatttgtgacaactttctctctcatactcacat 41985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 33224859 - 33224897
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33224859 tttgtgacaactttctctctcatactcacatcatattct 33224897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 35586808 - 35586770
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35586808 tttgtgacaactttctctctcatactcacatcatattct 35586770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 43444641 - 43444695
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||    
T  43444641 tgatatttgtacaaccactttatgacaactttctctctcatacttacatcatatt 43444695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 237030 - 237078
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| ||| ||||||||||||||||| ||||||||| ||||||    
T  237030 tgatatttgtacaatcaatttgtgacaactttatctctcatactcacat 237078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 366
Target Start/End: Original strand, 25887600 - 25887647
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcaca 366  Q
    |||||||||| || ||| |||||||||||||||||||||||| |||||    
T  25887600 tgatatttgtacatccactttgtgacaactttctctctcatactcaca 25887647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 366
Target Start/End: Complemental strand, 31274594 - 31274547
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcaca 366  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| |||||    
T  31274594 tgatatttgtacaaccaatttgtgacaactttttctcttatactcaca 31274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 10619750 - 10619696
Alignment:
Q  322 tatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    ||||||| |||||  ||| |||||||||||||||||||| |||||| ||||||||    
T  10619750 tatttgtacaacctttttttgacaactttctctctcatactcacattatattctt 10619696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 376
Target Start/End: Original strand, 26123407 - 26123441
Alignment:
Q  342 gacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||||||||||||||||||| ||||||||    
T  26123407 gacaactttctctctcatattcacattatattctt 26123441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 37899248 - 37899210
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  37899248 tttgtgacaactttctctctcatacttacatcatattct 37899210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 37899359 - 37899397
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  37899359 tttgtgacaactttatctctcatactcacatcatattct 37899397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 21204365 - 21204398
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcat 370  Q
    |||||||||||||||||||||||| |||||||||    
T  21204365 tttgtgacaactttctctctcatactcacatcat 21204398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 30180524 - 30180581
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||||| |||||||| |||| ||||||||||| ||| ||||    
T  30180524 tgatatttgtacaaccactttgtcacaactttatctcacatattcacattatactctt 30180581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 37856219 - 37856162
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||||||||||||| |||| |||| |||||| ||| ||||    
T  37856219 tgatatttgtacaaccattttgtgacaactttatctcacatactcacattatactctt 37856162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 38547344 - 38547287
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||| | ||| |||||||||||| ||||||| |||||| ||||||||    
T  38547344 tgatatttgtacaactattttttgacaactttctttctcatactcacattatattctt 38547287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 2323310 - 2323358
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||| | ||| |||||||||||||||||||| ||||||    
T  2323310 tgatatttgtacaacaattttatgacaactttctctctcatactcacat 2323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 6269402 - 6269438
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  6269402 tttgtgacaactttctctctcatactcacattatatt 6269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 7817655 - 7817703
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  7817655 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 7817703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 31711972 - 31711936
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  31711972 tttgtgacaactttctttctcatactcacatcatatt 31711936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 31785525 - 31785477
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| ||| |||||||||||||||| ||||||    
T  31785525 tgatatttgtacaaccactttatgaaaactttctctctcatactcacat 31785477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 42584838 - 42584874
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  42584838 tttgtgacaactttctctctcatactcacattatatt 42584874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 44496838 - 44496802
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  44496838 tttgtgacaactttctctctcatactcacattatatt 44496802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 45420114 - 45420066
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  |||| | ||| |||||||||||||||||||||||||||    
T  45420114 tgatatttgaacaactattttttgacaactttctctctcatattcacat 45420066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 3484776 - 3484833
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    ||||||||||||||||| ||| | |||||||||||||||||| |||||| ||||||||    
T  3484776 tgatatttgtccaaccattttattacaactttctctctcatactcacattatattctt 3484833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 47683807 - 47683855
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  47683807 tgatatttgtacaaccattttgtgacaactttctctctcatactcacat 47683855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 43169807 - 43169759
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| |||||||||||||| ||||||||| ||||||    
T  43169807 tgatatttgtacaaccattttgtgacaactttttctctcatactcacat 43169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 28884499 - 28884554
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||| |||||| | |||||||||||||||||||||| |||||| | ||||||    
T  28884499 atatttgtacaaccattatgtgacaactttctctctcatactcacatgagattctt 28884554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 26550273 - 26550303
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  26550273 tttgtgacaactttctctctcatattcacat 26550303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 26772404 - 26772434
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  26772404 tttgtgacaactttctctctcatattcacat 26772434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 33939271 - 33939301
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  33939271 tttgtgacaactttctctctcatattcacat 33939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 37302581 - 37302611
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  37302581 tttgtgacaactttctctctcatattcacat 37302611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 37780348 - 37780386
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  37780348 tttgtgacaactttctctctcatactcacatcgtattct 37780386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 11056976 - 11056927
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatc 368  Q
    |||||||||| |||| | ||| |||||||||||||| |||||||||||||    
T  11056976 tgatatttgtacaacaattttttgacaactttctctttcatattcacatc 11056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 23907041 - 23906984
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| | ||| |||||||||||||||||| |||||| | ||||||    
T  23907041 tgatatttgtacaaccattatgttacaactttctctctcatactcacatgagattctt 23906984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 29846945 - 29846888
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||   |||||||||||||||||| |||||| ||||||||    
T  29846945 tgatatttgtacaaccatttttgtacaactttctctctcatactcacattatattctt 29846888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 31997819 - 31997876
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| |||||||||||||||| | ||||| |||||| || |||||    
T  31997819 tgatatttgtacaaccactttgtgacaactttctttttcatactcacattattttctt 31997876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 3483138 - 3483178
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcat 359  Q
    |||||||||| |||||| |||||||| ||||||||||||||    
T  3483138 tgatatttgtacaaccactttgtgacgactttctctctcat 3483178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 19150354 - 19150318
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||||| |||| |||||    
T  19150354 tttgtgacaactttctctctcatatttacattatatt 19150318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 29917059 - 29917023
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  29917059 tttgtgacaactttctctctcatactcacattatatt 29917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 29966212 - 29966176
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  29966212 tttgtgacaactttctctctcatactcacattatatt 29966176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 45293064 - 45293028
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  45293064 tttgtgacaactttctctctcatactcacattatatt 45293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 46952955 - 46953003
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||| |||||| ||| ||| |||||||||||||||| ||||||    
T  46952955 tgatatttgtacaaccattttttgataactttctctctcatactcacat 46953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 49761325 - 49761373
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||||||    
T  49761325 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 49761373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 53871086 - 53871038
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacat 367  Q
    |||||||||  |||||| ||| |||||| ||||||||||||||||||||    
T  53871086 tgatatttgaacaaccattttatgacaattttctctctcatattcacat 53871038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 31654 - 31597
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| ||| ||||    
T  31654 tgatatttgtacaaccattttttgacaactttctctctcatactcacattatactctt 31597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 12441544 - 12441601
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    |||||||||| |||| | |||||||||||||||||||||||| |||||| | ||||||    
T  12441544 tgatatttgtacaactactttgtgacaactttctctctcatactcacatgacattctt 12441601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 28748130 - 28748186
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||||||||||||||||| ||| ||||||||||    
T  28748130 tgatatttgaacatccattttgtgacaactttctctctcatactcatatcatattct 28748186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 32149508 - 32149547
Alignment:
Q  321 atatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  32149508 atatttgtacaaccactttgtgacaactttctctctcata 32149547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Complemental strand, 8505809 - 8505779
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  8505809 tttgtgacaactttctctctcatattcacat 8505779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Complemental strand, 11635570 - 11635540
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  11635570 tttgtgacaactttctctctcatattcacat 11635540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 12177586 - 12177640
Alignment:
Q  322 tatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattctt 376  Q
    ||||||| |||| | |||||||||||||||||| ||||| |||||| ||||||||    
T  12177586 tatttgtacaactattttgtgacaactttctctttcatactcacattatattctt 12177640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Complemental strand, 32459552 - 32459522
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  32459552 tttgtgacaactttctctctcatattcacat 32459522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 32644629 - 32644683
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||| |||| | ||| |||||||||||||||||||| |||||| |||||    
T  32644629 tgatatttgtacaactattttttgacaactttctctctcatactcacattatatt 32644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 2163708 - 2163749
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    |||||||||| ||| ||||||||||||| |||||||||||||    
T  2163708 tgatatttgtacaatcaatttgtgacaattttctctctcata 2163749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 2175341 - 2175382
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    |||||||||| ||| ||||||||||||| |||||||||||||    
T  2175341 tgatatttgtacaatcaatttgtgacaattttctctctcata 2175382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 13423004 - 13423040
Alignment:
Q  337 tttgtgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||||| |||||| |||||    
T  13423004 tttgtgacaactttctctctcatactcacattatatt 13423040  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 25338109 - 25338077
Alignment:
Q  341 tgacaactttctctctcatattcacatcatatt 373  Q
    |||||||||||||||||||||| ||||||||||    
T  25338109 tgacaactttctctctcatatttacatcatatt 25338077  T

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Target: scaffold0155 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 371
Target Start/End: Complemental strand, 3325 - 3273
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcata 371  Q
    |||||||||| |||||| ||| | |||||||||||||||||| ||||||||||    
T  3325 tgatatttgtacaaccactttctcacaactttctctctcatactcacatcata 3273  T

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Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 44792 - 44848
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcatattcacatcatattct 375  Q
    |||||||||  || ||| |||||||||||||||||||||||| | ||||||||||||    
T  44792 tgatatttgaacatccattttgtgacaactttctctctcatacttacatcatattct 44848  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 366329 - 366359
Alignment:
Q  337 tttgtgacaactttctctctcatattcacat 367  Q
    |||||||||||||||||||||||||||||||    
T  366329 tttgtgacaactttctctctcatattcacat 366359  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 18701 - 18660
Alignment:
Q  319 tgatatttgtccaaccaatttgtgacaactttctctctcata 360  Q
    |||||||||| ||| ||||||||||||| |||||||||||||    
T  18701 tgatatttgtacaatcaatttgtgacaattttctctctcata 18660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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