View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4571_low_7 (Length: 335)

Name: NF4571_low_7
Description: NF4571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4571_low_7
NF4571_low_7
[»] chr6 (46 HSPs)
chr6 (7-204)||(31673574-31673768)
chr6 (267-334)||(31681892-31681960)
chr6 (211-285)||(7996378-7996452)
chr6 (211-285)||(8022349-8022423)
chr6 (209-289)||(20371106-20371186)
chr6 (200-285)||(9629357-9629442)
chr6 (217-298)||(13364692-13364773)
chr6 (195-292)||(33001282-33001379)
chr6 (223-292)||(30851599-30851666)
chr6 (217-298)||(19040343-19040424)
chr6 (199-291)||(426508-426600)
chr6 (211-291)||(5732504-5732584)
chr6 (210-290)||(7265588-7265668)
chr6 (224-292)||(7377977-7378045)
chr6 (226-285)||(9025494-9025553)
chr6 (234-285)||(9617442-9617493)
chr6 (223-290)||(21924930-21924997)
chr6 (199-285)||(9027151-9027237)
chr6 (195-283)||(9658848-9658936)
chr6 (218-285)||(26562681-26562748)
chr6 (198-292)||(8776966-8777060)
chr6 (199-285)||(9107370-9107456)
chr6 (199-285)||(10294080-10294166)
chr6 (179-285)||(12696277-12696383)
chr6 (234-280)||(30866149-30866195)
chr6 (212-253)||(677823-677864)
chr6 (211-284)||(7938101-7938174)
chr6 (200-285)||(34073347-34073432)
chr6 (199-292)||(34595107-34595200)
chr6 (209-285)||(3398602-3398677)
chr6 (227-298)||(31579214-31579283)
chr6 (212-252)||(32839679-32839719)
chr6 (228-283)||(7086797-7086852)
chr6 (226-285)||(7723250-7723309)
chr6 (209-284)||(13851719-13851794)
chr6 (226-285)||(32320669-32320728)
chr6 (211-285)||(16766682-16766756)
chr6 (209-283)||(26178683-26178757)
chr6 (235-292)||(7740650-7740707)
chr6 (212-285)||(16488590-16488663)
chr6 (217-278)||(17341671-17341732)
chr6 (211-284)||(19044449-19044522)
chr6 (235-280)||(26314639-26314684)
chr6 (234-283)||(32299283-32299332)
chr6 (225-285)||(9195754-9195814)
chr6 (231-279)||(21142123-21142171)
[»] chr3 (35 HSPs)
chr3 (200-291)||(8383231-8383322)
chr3 (223-290)||(25093499-25093566)
chr3 (209-278)||(32804547-32804616)
chr3 (215-285)||(8039835-8039905)
chr3 (199-285)||(15796294-15796380)
chr3 (198-298)||(26492192-26492292)
chr3 (224-291)||(7614409-7614476)
chr3 (224-291)||(7928448-7928515)
chr3 (232-290)||(21419450-21419508)
chr3 (226-292)||(24633394-24633460)
chr3 (234-284)||(40150572-40150622)
chr3 (236-292)||(8789543-8789599)
chr3 (226-274)||(9624641-9624689)
chr3 (209-285)||(25948887-25948963)
chr3 (210-290)||(48202264-48202344)
chr3 (214-285)||(10455778-10455849)
chr3 (209-252)||(12674534-12674577)
chr3 (233-292)||(32652036-32652095)
chr3 (227-298)||(45451554-45451625)
chr3 (218-285)||(49651786-49651853)
chr3 (256-290)||(13414499-13414533)
chr3 (256-298)||(40993322-40993364)
chr3 (224-277)||(11313808-11313861)
chr3 (227-284)||(13807170-13807227)
chr3 (224-277)||(16192758-16192811)
chr3 (234-283)||(17005621-17005670)
chr3 (234-279)||(29508452-29508497)
chr3 (256-285)||(35222968-35222997)
chr3 (234-291)||(49505148-49505205)
chr3 (244-292)||(2941576-2941624)
chr3 (178-285)||(8587021-8587129)
chr3 (244-292)||(13845518-13845566)
chr3 (199-279)||(24205047-24205127)
chr3 (234-286)||(48353730-48353782)
chr3 (177-292)||(55401025-55401141)
[»] chr8 (28 HSPs)
chr8 (225-284)||(12606830-12606889)
chr8 (218-292)||(31236570-31236644)
chr8 (172-284)||(4298887-4298999)
chr8 (223-285)||(11927086-11927148)
chr8 (218-290)||(13844591-13844663)
chr8 (223-285)||(11944662-11944724)
chr8 (212-285)||(4786338-4786411)
chr8 (189-289)||(24669396-24669496)
chr8 (209-285)||(31109518-31109594)
chr8 (230-298)||(33405371-33405439)
chr8 (234-292)||(14134707-14134765)
chr8 (199-285)||(22651949-22652035)
chr8 (218-280)||(27213539-27213601)
chr8 (209-275)||(29776019-29776085)
chr8 (226-283)||(11803259-11803316)
chr8 (225-290)||(34897084-34897149)
chr8 (234-290)||(12985400-12985456)
chr8 (199-283)||(29510306-29510390)
chr8 (199-270)||(4673440-4673511)
chr8 (227-278)||(8798838-8798889)
chr8 (209-284)||(28384995-28385070)
chr8 (234-292)||(3025559-3025617)
chr8 (198-292)||(20873041-20873135)
chr8 (209-285)||(15816129-15816205)
chr8 (212-284)||(20679396-20679468)
chr8 (218-278)||(24362209-24362269)
chr8 (221-285)||(25172698-25172762)
chr8 (218-282)||(39954282-39954346)
[»] chr5 (33 HSPs)
chr5 (211-285)||(3966488-3966562)
chr5 (213-297)||(28588662-28588746)
chr5 (234-298)||(30502375-30502439)
chr5 (234-298)||(30542718-30542782)
chr5 (212-298)||(23012395-23012480)
chr5 (179-252)||(26716097-26716170)
chr5 (179-252)||(26985837-26985910)
chr5 (209-285)||(16203795-16203871)
chr5 (185-292)||(26312727-26312835)
chr5 (213-285)||(32630735-32630807)
chr5 (199-290)||(21191051-21191142)
chr5 (212-289)||(34276858-34276934)
chr5 (234-290)||(17925167-17925223)
chr5 (212-252)||(19429418-19429458)
chr5 (212-285)||(11685925-11685998)
chr5 (226-298)||(18421828-18421900)
chr5 (210-286)||(30098310-30098386)
chr5 (225-285)||(39205879-39205939)
chr5 (218-298)||(42029744-42029824)
chr5 (234-285)||(6471889-6471940)
chr5 (237-284)||(15086482-15086529)
chr5 (177-290)||(19820391-19820503)
chr5 (234-285)||(22423812-22423863)
chr5 (226-285)||(41091257-41091316)
chr5 (212-285)||(6035469-6035541)
chr5 (261-290)||(15874197-15874226)
chr5 (212-285)||(21814247-21814320)
chr5 (212-285)||(31084309-31084382)
chr5 (224-277)||(32766951-32767004)
chr5 (238-291)||(34879362-34879415)
chr5 (218-283)||(38749565-38749630)
chr5 (199-291)||(6247595-6247687)
chr5 (221-285)||(18592068-18592132)
[»] chr2 (38 HSPs)
chr2 (217-292)||(37411237-37411312)
chr2 (199-284)||(18276494-18276579)
chr2 (177-282)||(23717977-23718082)
chr2 (177-282)||(24105649-24105754)
chr2 (198-298)||(30404837-30404937)
chr2 (227-281)||(30527599-30527653)
chr2 (234-291)||(34691799-34691856)
chr2 (234-291)||(34714211-34714268)
chr2 (217-278)||(35449504-35449565)
chr2 (174-285)||(20539674-20539786)
chr2 (234-297)||(5367200-5367263)
chr2 (234-297)||(18570980-18571043)
chr2 (217-283)||(18420436-18420502)
chr2 (217-283)||(39279666-39279732)
chr2 (217-290)||(896202-896275)
chr2 (219-283)||(4332919-4332981)
chr2 (177-291)||(19536391-19536507)
chr2 (226-278)||(19614183-19614235)
chr2 (209-277)||(21616745-21616813)
chr2 (256-292)||(34993975-34994011)
chr2 (209-285)||(37558960-37559036)
chr2 (209-292)||(15972856-15972939)
chr2 (209-276)||(16069263-16069330)
chr2 (234-285)||(44860328-44860379)
chr2 (224-289)||(1327976-1328039)
chr2 (217-271)||(21782832-21782886)
chr2 (224-266)||(27084260-27084302)
chr2 (223-292)||(31284045-31284115)
chr2 (224-298)||(31808075-31808149)
chr2 (234-283)||(6045918-6045967)
chr2 (209-290)||(18421946-18422027)
chr2 (234-283)||(44605141-44605190)
chr2 (177-284)||(14996224-14996332)
chr2 (178-290)||(20242722-20242834)
chr2 (225-285)||(24975325-24975385)
chr2 (241-285)||(35056883-35056927)
chr2 (240-284)||(37491856-37491900)
chr2 (212-292)||(42205828-42205908)
[»] chr7 (36 HSPs)
chr7 (212-282)||(3520345-3520415)
chr7 (212-290)||(7197292-7197370)
chr7 (209-285)||(1433437-1433513)
chr7 (217-284)||(7438697-7438764)
chr7 (224-290)||(20549789-20549855)
chr7 (217-285)||(22602710-22602778)
chr7 (175-285)||(27944989-27945100)
chr7 (212-285)||(21138996-21139066)
chr7 (211-285)||(24339627-24339701)
chr7 (211-285)||(32308105-32308179)
chr7 (212-285)||(6630912-6630985)
chr7 (236-285)||(9482944-9482993)
chr7 (198-283)||(15902794-15902879)
chr7 (223-284)||(19206047-19206108)
chr7 (219-284)||(23948385-23948450)
chr7 (212-285)||(26329382-26329455)
chr7 (221-285)||(5548671-5548735)
chr7 (224-284)||(24146814-24146874)
chr7 (209-281)||(38134410-38134482)
chr7 (199-279)||(43249966-43250046)
chr7 (228-283)||(3142080-3142135)
chr7 (223-274)||(10377504-10377555)
chr7 (226-285)||(16341496-16341555)
chr7 (209-292)||(26733287-26733370)
chr7 (209-291)||(3721077-3721158)
chr7 (209-283)||(21828407-21828481)
chr7 (234-292)||(26022542-26022600)
chr7 (209-271)||(29787383-29787445)
chr7 (212-285)||(7328691-7328764)
chr7 (234-283)||(23128663-23128712)
chr7 (177-250)||(24105629-24105702)
chr7 (211-292)||(25481887-25481968)
chr7 (173-250)||(30813759-30813836)
chr7 (212-273)||(48246825-48246886)
chr7 (234-298)||(21880160-21880224)
chr7 (233-285)||(35297672-35297724)
[»] chr1 (37 HSPs)
chr1 (209-291)||(9709803-9709885)
chr1 (212-298)||(36878447-36878533)
chr1 (209-285)||(6427333-6427409)
chr1 (224-283)||(1864882-1864941)
chr1 (177-290)||(39130762-39130876)
chr1 (209-291)||(52903232-52903314)
chr1 (218-298)||(21530681-21530761)
chr1 (177-298)||(38078648-38078771)
chr1 (224-284)||(38503318-38503378)
chr1 (226-290)||(40181871-40181935)
chr1 (209-292)||(46348376-46348459)
chr1 (210-292)||(37598816-37598897)
chr1 (199-252)||(15641063-15641116)
chr1 (238-275)||(27966008-27966045)
chr1 (236-285)||(44482240-44482289)
chr1 (223-291)||(13436455-13436523)
chr1 (218-290)||(30847715-30847787)
chr1 (199-278)||(398772-398851)
chr1 (209-284)||(2896122-2896197)
chr1 (234-285)||(7918211-7918262)
chr1 (212-283)||(13997869-13997940)
chr1 (217-284)||(19562622-19562689)
chr1 (199-285)||(5927340-5927426)
chr1 (199-285)||(6612171-6612257)
chr1 (234-292)||(14332635-14332693)
chr1 (218-292)||(29163374-29163448)
chr1 (236-285)||(25361896-25361945)
chr1 (204-285)||(34712383-34712464)
chr1 (217-285)||(1486709-1486777)
chr1 (225-285)||(9629900-9629960)
chr1 (257-297)||(19637799-19637839)
chr1 (225-285)||(20157350-20157410)
chr1 (194-277)||(25098563-25098647)
chr1 (211-291)||(31672889-31672969)
chr1 (241-285)||(34371728-34371772)
chr1 (225-285)||(38075970-38076030)
chr1 (209-285)||(42359449-42359525)
[»] scaffold0652 (1 HSPs)
scaffold0652 (209-292)||(455-538)
[»] scaffold0223 (1 HSPs)
scaffold0223 (175-285)||(20120-20231)
[»] scaffold0036 (1 HSPs)
scaffold0036 (218-285)||(9747-9814)
[»] scaffold0020 (1 HSPs)
scaffold0020 (224-285)||(135312-135373)
[»] scaffold0697 (1 HSPs)
scaffold0697 (218-298)||(1636-1716)
[»] scaffold0110 (1 HSPs)
scaffold0110 (223-283)||(28847-28907)
[»] chr4 (27 HSPs)
chr4 (234-278)||(3712516-3712560)
chr4 (209-285)||(40742574-40742650)
chr4 (177-252)||(12628618-12628693)
chr4 (218-285)||(35952617-35952684)
chr4 (206-252)||(18743860-18743906)
chr4 (212-285)||(35723384-35723458)
chr4 (199-292)||(23292979-23293072)
chr4 (224-292)||(8423711-8423779)
chr4 (209-285)||(13783264-13783340)
chr4 (233-284)||(5775359-5775410)
chr4 (199-298)||(21945476-21945575)
chr4 (225-276)||(22440609-22440660)
chr4 (217-280)||(40613441-40613504)
chr4 (215-298)||(48139253-48139336)
chr4 (194-292)||(49430993-49431092)
chr4 (209-275)||(903905-903971)
chr4 (234-284)||(7214523-7214573)
chr4 (234-284)||(33950144-33950194)
chr4 (232-278)||(44081584-44081630)
chr4 (234-292)||(54580016-54580074)
chr4 (212-285)||(15029751-15029824)
chr4 (212-273)||(21539879-21539940)
chr4 (233-298)||(40179623-40179688)
chr4 (226-271)||(56257933-56257978)
chr4 (177-285)||(3947766-3947874)
chr4 (224-284)||(9996838-9996898)
chr4 (225-281)||(26504303-26504359)
[»] scaffold0027 (1 HSPs)
scaffold0027 (199-286)||(46655-46742)
[»] scaffold0050 (1 HSPs)
scaffold0050 (218-292)||(70270-70344)
[»] scaffold0011 (1 HSPs)
scaffold0011 (234-284)||(240022-240072)
[»] scaffold0053 (1 HSPs)
scaffold0053 (199-292)||(8771-8864)
[»] scaffold0018 (1 HSPs)
scaffold0018 (189-250)||(192284-192345)
[»] scaffold0171 (1 HSPs)
scaffold0171 (177-285)||(23371-23479)
[»] scaffold0168 (1 HSPs)
scaffold0168 (209-281)||(21026-21098)
[»] scaffold0008 (1 HSPs)
scaffold0008 (209-285)||(263372-263448)
[»] scaffold0007 (1 HSPs)
scaffold0007 (199-279)||(225274-225354)
[»] scaffold0376 (1 HSPs)
scaffold0376 (226-285)||(6312-6371)
[»] scaffold0116 (1 HSPs)
scaffold0116 (218-285)||(9890-9957)
[»] scaffold0022 (2 HSPs)
scaffold0022 (233-284)||(90850-90901)
scaffold0022 (218-285)||(99885-99952)


Alignment Details
Target: chr6 (Bit Score: 119; Significance: 9e-61; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 31673768 - 31673574
Alignment:
Q  7 aaaacagcacaataagaaaaagattgaactcaatccataaatgagagactaaaagcacaaagcaaaaaagctaaagtttggcttccatttcaatttccct 106  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||| |||||||||||||||||| |||||    
T  31673768 aaaacagcacggtaagaaaaagattgaactcaatccataaatgaga--ctaaaagcacaaag-aaataagctaaaatttggcttccatttcaatctccct 31673672  T
Q  107 tcccaaagacaccctttaagcacaggcgaaagaatggtcatgcacccccaacttgctaatccctaaaaacctatgacgcacagatatggacacggaca 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || | ||  |||| |||| |||||||||||    
T  31673671 tcccaaagacaccctttaagcacaggcaaaagaatggtcatgcacacccaacttgctaattcctaaacacatgtggagcacggatacggacacggaca 31673574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 31681892 - 31681960
Alignment:
Q  267 attatatgtgtc-ggtgtcgaacacgaaacatgcagactttctaccacttattgattttgcaccgagta 334  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31681892 attatatgtgtctggtgtcgaacacgaaacatgcagactttctaccacttattgattttgcaccgagta 31681960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 7996452 - 7996378
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| |||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||| ||||||||||    
T  7996452 ggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 8022349 - 8022423
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| |||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||| ||||||||||    
T  8022349 ggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 20371186 - 20371106
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaaca 289  Q
    ||||||||||||| |||||||| | |||||||||||||||||||   || ||||||| |||||||||||||||||||||||    
T  20371186 acggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcgaaca 20371106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 9629357 - 9629442
Alignment:
Q  200 ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| || ||||| ||||||| |||||||| |  ||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 13364773 - 13364692
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||||||||||||||| | ||||||||||||||||||  |||||| |||||| |||||||||||||| | |||||| |||||    
T  13364773 tgacatgccgacactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatg 13364692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 33001379 - 33001282
Alignment:
Q  195 gacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||||||  | |||| || ||||| |||||||||| ||||||||||| |||||||   |||| ||||||||||||||||||||||||| ||||||    
T  33001379 gacacggacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacga 33001282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 30851599 - 30851666
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||| ||||||||| |||||||||   |||||||||||||||||||||||||||||| ||||||    
T  30851599 gccgacactgctaataatttaagaaaatcac--aattcaatgtaattatatgtgtcggtgtcggacacga 30851666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 19040343 - 19040424
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||| |||||||| | |||||||||||||||||||   |||||| |||||||||||||||| |||||| |||||| |||||    
T  19040343 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacacatg 19040424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 426600 - 426508
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    |||||| || ||||||| ||||| |||||||| ||||||||||||| |||||||   |||| |||||||||| | |||||||||||| |||||    
T  426600 cggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 5732584 - 5732504
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||| ||||| |||||||| |||||||||||||||||||||   | || | ||||||||||||||||||||||| |||||    
T  5732584 ggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 7265668 - 7265588
Alignment:
Q  210 cggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||| ||||| ||| |||| | |||||||||||||||||||   |||||| ||||||||||||||||||||||| ||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 7377977 - 7378045
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| | ||| |||||||||||||||   |||||||||||||||||||||||||||||| ||||||    
T  7377977 ccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacga 7378045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 9025553 - 9025494
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| |||||||||||||||||||   |||||| |||||||||||||||||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 9617442 - 9617493
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 21924997 - 21924930
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||||||| |||||||||||||| ||||   |||||| ||||||||||||||||||||||| ||||    
T  21924997 gccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 9027151 - 9027237
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||||| |||||   |||||  |||||||||||||||||||||||    
T  9027151 cggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 9658848 - 9658936
Alignment:
Q  195 gacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||| |||| || ||||||| ||||| |||||||| | ||||||||| |||||||||   |||||| ||||||||||| |||||||||    
T  9658848 gacacagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 26562681 - 26562748
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| |||||||||| ||| |||||||||||||||   |||||| ||||||||||||||||| |||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 292
Target Start/End: Complemental strand, 8777060 - 8776966
Alignment:
Q  198 acggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| || ||||||| ||||| ||||||||   ||||||||||| |||||||  ||||||| |||||||| | |||| ||||||| ||||||    
T  8777060 acggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacga 8776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 9107456 - 9107370
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||||| | ||| |||||||| | ||||||||||| |||||||  ||||||| |||||||| | ||||||||||||    
T  9107456 cggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 10294080 - 10294166
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||| | ||||||||||| || | ||||||||||||| ||||    | ||||||||||||||||||||||||||||    
T  10294080 cggacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcg 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 12696277 - 12696383
Alignment:
Q  179 atgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    |||| |||| |||| ||||||||||| || ||||||| ||||| |||||||| | ||||||||||| ||||| |   |||||| |||||||| | |||||    
T  12696277 atgaagcacggatacggacacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T
Q  279 ggtgtcg 285  Q
     ||||||    
T  12696377 agtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 30866195 - 30866149
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcgg 280  Q
    |||||||||||||||||||   |||||||||||||||||||||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 677823 - 677864
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcat 253  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  677823 gacactgacacgccgacactgttaataatttgagaaaatcat 677864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 7938101 - 7938174
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||| ||||| |||||||| | ||||||||||| ||||||||  |||| | |||||||||| |||||||||||    
T  7938101 ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 34073432 - 34073347
Alignment:
Q  200 ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| || ||||||| ||||||||| |||  | ||||||||||||||||||    |||||| |||||||||||| ||||||||||    
T  34073432 ggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcg 34073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 34595107 - 34595200
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||| || ||||||| ||||| ||||||||   ||||||||||| |||||||   |||||| |||||||| | |||||||||||| ||||||    
T  34595107 cggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 34595200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 3398602 - 3398677
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||| |||||||| | ||||||||||| ||||||||  |||||| |||||||||| || |||||||||    
T  3398602 acggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcg 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 298
Target Start/End: Complemental strand, 31579283 - 31579214
Alignment:
Q  227 acactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||| |||||||||||||||||||||   |||||| ||||||  ||||||||||||||| |||||| |||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacacgacacatg 31579214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 32839719 - 32839679
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  32839719 gacatcgacatgctgacactgttaataatttgagaaaatca 32839679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 7086797 - 7086852
Alignment:
Q  228 cactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||| |||||||||||||||||||   |||| | |||||||||||||||||||||    
T  7086797 cactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 7723309 - 7723250
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||||||||||||||||||  ||||||   ||||||||||| |||||||||    
T  7723309 gacactgctaataatttgagaaaatcatataattcagcataattatatgtatcggtgtcg 7723250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 13851719 - 13851794
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||| ||||| | |||||| | ||||||||||||||||| |   |||||| ||||||||||||||||| ||||    
T  13851719 acggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 13851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 32320728 - 32320669
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| ||||||||||||| |||||||   |||||||||| ||||||||| |||||||||    
T  32320728 gacaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtcg 32320669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 16766682 - 16766756
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| ||||| |||||||| | ||||||||||| |||||||   |||||| |||||||| | ||||||||||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 26178757 - 26178683
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||||||||| |||| ||||  ||||||||||| |||||||   |||| | |||||| ||||||||||||||    
T  26178757 acggacattgacaagccgtcacttctaataatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 7740650 - 7740707
Alignment:
Q  235 aataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||||| ||||||||  ||||| | |||||||||||||||| |||||| ||||||    
T  7740650 aataatttgtgaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacacga 7740707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 16488663 - 16488590
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| |||| |||||||| | ||||  ||| |||||||||  |||| || |||||||||||||||||||||||    
T  16488663 gacatggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 17341732 - 17341671
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    ||||| |||||||| ||||||||||||| |||||||   |||||| |||||||||| |||||    
T  17341732 tgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 19044449 - 19044522
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||| ||||| ||||||||   |||||||||||||| ||||   |||||| ||| ||||||||||||||||||    
T  19044449 ggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 26314684 - 26314639
Alignment:
Q  235 aataatttgagaaaatcattaaattcaatgtaattatatgtgtcgg 280  Q
    |||||||||| ||||||||  |||||||||||||||||| ||||||    
T  26314684 aataatttgaaaaaatcatataattcaatgtaattatatatgtcgg 26314639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||||||||||||||||   ||||||||||| ||||| ||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 9195814 - 9195754
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||  ||||||||||||||||| |   |||| | |||||||||||||||||||||||    
T  9195814 cgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcg 9195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 21142123 - 21142171
Alignment:
Q  231 tgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcg 279  Q
    |||||||||||||||||||||||  |||||| | || ||||||||||||    
T  21142123 tgttaataatttgagaaaatcatataattcagtctagttatatgtgtcg 21142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 8383231 - 8383322
Alignment:
Q  200 ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||| || ||||||||||||| |||||||| | ||||||||||||||||||||  |||||| |||||||||| |||||||||||| |||||    
T  8383231 ggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 25093499 - 25093566
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||||||||||| ||||||||||||||   |||||| ||||||||||||||||||||||| ||||    
T  25093499 gccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacac 25093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 32804616 - 32804547
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    |||| ||||||||||||||||| |||||||||||||||||||||   |||| | ||||||||||||||||    
T  32804616 acgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 8039905 - 8039835
Alignment:
Q  215 attgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||| |||| | ||||||||||||||||| ||  |||||| |||||||||||||||||||||||    
T  8039905 attgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcg 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 15796380 - 15796294
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||||| ||||| |||||||| ||||||||||||| ||||||||  |||||| |||||||| |  |||||||||||    
T  15796380 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 26492292 - 26492192
Alignment:
Q  198 acggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacat 297  Q
    ||||||| || ||||||| ||||| |||||||  | ||||||||||| ||||||||  |||||| |||||||| | || ||||||||| |||||| ||||    
T  26492292 acggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacat 26492193  T
Q  298 g 298  Q
    |    
T  26492192 g 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 7614476 - 7614409
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||| ||||||||||| |||||||||   |||||| | ||||||||| |||||||||||||||||    
T  7614476 ccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtcgaacacg 7614409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 7928448 - 7928515
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||| | ||||||||||| |||||||   |||||| ||||||||||||||||||||||| |||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 21419508 - 21419450
Alignment:
Q  232 gttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||||||| ||||||| ||  |||||||||||||||||| ||| ||||||||||||    
T  21419508 gttaataatttaagaaaataatataattcaatgtaattatatatgttggtgtcgaacac 21419450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 24633460 - 24633394
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||| ||||||||||||  |||||||   |||||||||||||||||||||||||||| | ||||||    
T  24633460 gacacagttaataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttggacacga 24633394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 40150622 - 40150572
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  40150622 taataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtc 40150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 8789599 - 8789543
Alignment:
Q  236 ataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||||||||   |||||  ||||||||||||||||||||||| ||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacga 8789543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 9624641 - 9624689
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatg 274  Q
    ||||||| |||||||||||||||||||   |||||||||||||||||||    
T  9624641 gacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 25948963 - 25948887
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||||||||| || | ||||||||||| |||||||   |||||| |||||||||| |||| |||||||    
T  25948963 acggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 48202344 - 48202264
Alignment:
Q  210 cggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||||||||| |||||||    ||||| |||||||||||||   |||| |||||||||||||||||| ||||| |||||    
T  48202344 cggacattgacacgccgacatccataatagtttgagaaaatcacataatttaatgtaattatatgtgtctgtgtcaaacac 48202264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 10455778 - 10455849
Alignment:
Q  214 cattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||| ||| |||||| ||||||| ||||||||||||  || | | ||||||||||||||| |||||||    
T  10455778 cattgacacgccaacactgctaataatatgagaaaatcatataactaagtgtaattatatgtgttggtgtcg 10455849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 12674577 - 12674534
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||||||||||||  ||||||||| |||||||||||||||||||    
T  12674577 acggacattgacacaccgacactgctaataatttgagaaaatca 12674534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 32652095 - 32652036
Alignment:
Q  233 ttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||| ||||||||||| | |||| |||||||||||| ||| |||| ||||||||    
T  32652095 ttaataatttaagaaaatcatttacttcactgtaattatatgagtccgtgttgaacacga 32652036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 45451554 - 45451625
Alignment:
Q  227 acactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||||| |||||||||||||||||||   | |||| | |||| |||||||||||||||| |||||| |||||    
T  45451554 acactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatg 45451625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 49651853 - 49651786
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||||| | ||||||||||| |||||||   |||||| |||||||| | ||||||||||||    
T  49651853 gacatgccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 290
Target Start/End: Original strand, 13414499 - 13414533
Alignment:
Q  256 aattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||||||||||||||||||||||||||| ||||    
T  13414499 aattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 40993364 - 40993322
Alignment:
Q  256 aattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||||| ||||||||||||||||||||||| |||||| |||||    
T  40993364 aattcagtgtaattatatgtgtcggtgtcggacacgacacatg 40993322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 11313861 - 11313808
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgt 277  Q
    ||||||||| |||||||||||||||||||   |||| | |||||||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 13807170 - 13807227
Alignment:
Q  227 acactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||| ||| |||||||||||||||   |||||||| |||| |||||||||||||||    
T  13807170 acactgataacaatttgagaaaatcacataattcaatataataatatgtgtcggtgtc 13807227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 16192811 - 16192758
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgt 277  Q
    ||||||| ||||||||||||||||||| |   |||||| |||||||||||||||    
T  16192811 ccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 17005670 - 17005621
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||||||| ||||||||  |||||| |||||||||| ||||||||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 29508452 - 29508497
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcg 279  Q
    ||||||||||| ||||||||  |||||| |||||||||||||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 35222968 - 35222997
Alignment:
Q  256 aattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||||||||||||||||||||||    
T  35222968 aattcaatgtaattatatgtgtcggtgtcg 35222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 49505205 - 49505148
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    |||||||||||||||||||   |||| | |||||||||||||||| |||||| |||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 2941576 - 2941624
Alignment:
Q  244 agaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||  |||| || ||||||||||||||||||||||| ||||||    
T  2941576 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacga 2941624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 8587129 - 8587021
Alignment:
Q  178 tatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    ||||| ||||||||| |||||| ||||| || ||||||| ||||| ||||||||   || |||||||| |||||||   |||| | |||||||| | |||    
T  8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtg 8587030  T
Q  277 tcggtgtcg 285  Q
    |||||||||    
T  8587029 tcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 13845566 - 13845518
Alignment:
Q  244 agaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||  |||| || ||||||||||||||||||||||| ||||||    
T  13845566 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 13845518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 24205127 - 24205047
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcg 279  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||||||||| |   ||| || |||||||||| ||||||    
T  24205127 cggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 48353782 - 48353730
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcga 286  Q
    |||||||||||||||||||   |||| | ||||||||||||| ||||||||||    
T  48353782 taataatttgagaaaatcaaataattaattgtaattatatgtatcggtgtcga 48353730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 55401025 - 55401141
Alignment:
Q  177 ctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgt 275  Q
    |||||| ||||||||| |||||| ||| | || ||||||| ||| | ||||||||   ||||||||||| |||||||   |||| | |||||||| | ||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagt 55401124  T
Q  276 gtcggtgtcgaacacga 292  Q
    |||||||||| ||||||    
T  55401125 gtcggtgtcggacacga 55401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 12606889 - 12606830
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12606889 cgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 31236644 - 31236570
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||| |||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||| || ||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 4298999 - 4298887
Alignment:
Q  172 aaaacctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattat 271  Q
    ||||||||||| |||| |||||||||||||||| || || || | | ||| |||||||| ||||||||||||| |||||||   |||| ||||||||||     
T  4298999 aaaacctatgaagcacggatatggacacggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattac 4298900  T
Q  272 atgtgtcggtgtc 284  Q
    | |||||||||||    
T  4298899 aagtgtcggtgtc 4298887  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 11927148 - 11927086
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||||||| |||||||   |||||| |||||||||||||||||||||||    
T  11927148 gccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 13844663 - 13844591
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||| |||||||||| |||||||||||||||||||   |||| | ||||||||||||||||||||||| ||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

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Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 11944662 - 11944724
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||||||| |||||||   || ||| |||||||||||||||||||||||    
T  11944662 gccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcg 11944724  T

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Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 4786411 - 4786338
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| ||||||||  |||||||||| |||||||||   |||||| |||||||||||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

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Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 24669396 - 24669496
Alignment:
Q  189 gatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaac 288  Q
    |||| ||||||||||| || || |||| ||||| || ||||| |||||||||||||| |||| |   |||||| |||||||| | |||||||||||||||    
T  24669396 gatacggacacggacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcgaac 24669495  T
Q  289 a 289  Q
    |    
T  24669496 a 24669496  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 31109594 - 31109518
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||   |||||| | ||| |||||||||| ||||||    
T  31109594 acggacactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtcagtgtcg 31109518  T

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Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 33405439 - 33405371
Alignment:
Q  230 ctgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||||||||||||||||||| ||   |||| | ||||||||||||||||||||||| |||||| |||||    
T  33405439 ctgttaataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatg 33405371  T

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Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 14134707 - 14134765
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||||||||||   |||||| ||||||||||| |||||||||| |||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacga 14134765  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 22651949 - 22652035
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||| |||||||   |||||||| |||||| | ||||||||||||    
T  22651949 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 27213539 - 27213601
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcgg 280  Q
    |||| |||||||||| ||||||||| |||||||||   |||||| ||||||||||||||||||    
T  27213539 gacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

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Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 29776019 - 29776085
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgt 275  Q
    ||||||||||||| | |||||||| |||||||||||||||||||   |||||| | |||||||||||    
T  29776019 acggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattatatgt 29776085  T

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Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 11803259 - 11803316
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||||||||||||| |||||||||   |||||| ||||||||||||||| |||||    
T  11803259 gacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

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Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 34897084 - 34897149
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||| | |||||||||||||||||||   |||||| ||||||||||||||||| ||||| ||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

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Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 12985400 - 12985456
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||||||||||||||||   ||||||||||||| |||| ||||||||||| ||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 29510390 - 29510306
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||| |||||||  ||||||| | |||||| | ||||||||||    
T  29510390 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 4673511 - 4673440
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaatta 270  Q
    |||||| || || |||| ||||| |||||||| | ||||||||||| |||||||| ||||||| ||||||||    
T  4673511 cggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 8798889 - 8798838
Alignment:
Q  227 acactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    |||||||||||||||||||||||| |   |||||||| ||||||||||||||    
T  8798889 acactgttaataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 28385070 - 28384995
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||| |||||| ||||||| ||||||||| |||  |||||    |||||| ||||||||||||||||||||||    
T  28385070 acggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtc 28384995  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 3025559 - 3025617
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||||||||||   |||||| |||||||||| ||||| |||||| ||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacga 3025617  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 20873041 - 20873135
Alignment:
Q  198 acggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| || ||||||| ||||| |||||||  | ||||||||||| |||||||   |||| | |||||||| | |||||||||||| ||||||    
T  20873041 acggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 20873135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 15816205 - 15816129
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||| ||||||||   ||||||||||| |||||||   |||| | |||||||||| ||||||||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 20679468 - 20679396
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||| ||||||| ||||||   |||||||||||||||||||   | |||| |||||||||| |||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 24362269 - 24362209
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    |||| |||||||| | ||||||||||||| |||||   |||||| ||||||||||||||||    
T  24362269 gacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 25172762 - 25172698
Alignment:
Q  221 atgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||||| ||||||||||| ||||| |   | || |||||||||||||||||||||||||    
T  25172762 atgctgacactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcg 25172698  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 39954346 - 39954282
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtg 282  Q
    |||| |||||||| | |||||||||||||||||||   |||| | |||||||||||||| |||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

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Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 3966488 - 3966562
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| |||||||||||||| | |||||||||||||||||||   |||||| |||||||||||||||||||||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 28588746 - 28588662
Alignment:
Q  213 acattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacat 297  Q
    ||||||||| |||||||| | |||||||||||||||||||   |||||| |||||||||| |||||||||||| |||||| ||||    
T  28588746 acattgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacat 28588662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 30502439 - 30502375
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||| |||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatg 30502375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 30542782 - 30542718
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||| |||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatg 30542718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 23012480 - 23012395
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||||||  |||||| || ||||||||||||||||||||  |||| ||||||||||||||||||||||| | |||||| |||||    
T  23012480 gacattgacacaccgaca-tgctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacacatg 23012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 26716097 - 26716170
Alignment:
Q  179 atgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||| |||| |||| ||||||||||| || |  ||||||||||||||||||||| |||||||||||||||||||    
T  26716097 atgaagcaccgatacggacacggacacgacatagacattgacatgccgacactgctaataatttgagaaaatca 26716170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 26985837 - 26985910
Alignment:
Q  179 atgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||| |||| |||| ||||||||||| || |  ||||||||||||||||||||| |||||||||||||||||||    
T  26985837 atgaagcaccgatacggacacggacacgacatagacattgacatgccgacactgctaataatttgagaaaatca 26985910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 16203871 - 16203795
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| | |||||||||||||| ||||||||||||||||||    |||| | |||||||||||||||||||||||    
T  16203871 acggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcg 16203795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 26312727 - 26312835
Alignment:
Q  185 cacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||||| |||||| ||||| || | ||||| ||| ||||||| || |  |||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  26312727 cacagatacggacactggacacgacatggacactgatatgccgataccgcaaataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgt 26312826  T
Q  284 cgaacacga 292  Q
    || ||||||    
T  26312827 cggacacga 26312835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 32630807 - 32630735
Alignment:
Q  213 acattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||| || ||||| | ||||||||||||||||| ||  ||||||||||||||||||||||| ||||||    
T  32630807 acattgacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 21191142 - 21191051
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||| || ||||||| |||||||||||||| | ||||||||||| |||||||   |||||| |||||||| | |||||||||||| ||||    
T  21191142 cggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 34276858 - 34276934
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaaca 289  Q
    ||||||||||  ||||||| ||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||    
T  34276858 gacattgacacaccgacacagttaataatttaagaaaatcataaaattcagtgtaattatgtttgtc-gtgtcgaaca 34276934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 17925223 - 17925167
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||||| |||||||||   ||||||||||||| |||||||||||||||||||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 19429418 - 19429458
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  19429418 gacattgacatgccgacaatgttaataatttgagaaaatca 19429458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 11685925 - 11685998
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| |||||||||||||| | ||||||||||||||| ||    |||| | |||||||||||||||||||||||    
T  11685925 gacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcg 11685998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 18421900 - 18421828
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||| | |||||||||||||||||   ||| || |||||||||||||||||| |||| |||||| |||||    
T  18421900 gacactgctgataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatg 18421828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 30098310 - 30098386
Alignment:
Q  210 cggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcga 286  Q
    |||||| ||||| | ||| || |||||||||||||||||||||   |||||||||||||||||  ||||||| ||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcga 30098386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 39205879 - 39205939
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||| ||||||||||||||||||||  ||||   ||||||||||||||| |||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcg 39205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 42029744 - 42029824
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||| ||||||||  |||| || || |||||||||   |||||||||||||||||||| ||||||||| |||||| |||||    
T  42029744 gacacgccgacacaattaaaaaatttagaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatg 42029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 6471940 - 6471889
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||||   |||||| ||||||||||||||| |||||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 15086482 - 15086529
Alignment:
Q  237 taatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||||||||||||  |||  ||||||||||||||||||||||||    
T  15086482 taatttgagaaaatcatataatgtaatgtaattatatgtgtcggtgtc 15086529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 19820503 - 19820391
Alignment:
Q  177 ctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgt 275  Q
    |||||| |||| |||| |||||| ||||| || ||||||| |||||  ||||||| | ||||||||||||||||||||  |||| | |  ||||||| ||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatcat--aattaagtacaattataagt 19820406  T
Q  276 gtcggtgtcgaacac 290  Q
    |||||||||| ||||    
T  19820405 gtcggtgtcggacac 19820391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 22423863 - 22423812
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||||   |||||||| ||||||||| |||||||||||    
T  22423863 taataatttgagaaaatcacataattcaatataattatatatgtcggtgtcg 22423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 41091316 - 41091257
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| |||| ||||||||||||||   |||||| ||||||||||||||||| |||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 6035469 - 6035541
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| |||||||| | ||||||||||||||| | ||  |||||| ||||||||||| |||||||||||    
T  6035469 gacactgacacgccgacaccgctaataatttgagaaa-taatataattcagtgtaattatatttgtcggtgtcg 6035541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 15874226 - 15874197
Alignment:
Q  261 aatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||||||||||||||||||||||||||    
T  15874226 aatgtaattatatgtgtcggtgtcgaacac 15874197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 21814247 - 21814320
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| |||| |||||||| | ||||  ||| |||||||||  |||| || |||||||||||||||||||||||    
T  21814247 gacatggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 31084309 - 31084382
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| |||||||| | ||||||||||| |||||||   ||||||||||||||| | |||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 32767004 - 32766951
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgt 277  Q
    ||||||| | ||||||||||||||||||    ||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgt 32766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 34879362 - 34879415
Alignment:
Q  238 aatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||||||||||||  |||||| |||||| |||||||||| ||||| |||||    
T  34879362 aatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 38749630 - 38749565
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||| |||||| | ||||||||||| ||||| |   |||||||||||||||||||||| |||||    
T  38749630 gacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgt 38749565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 6247595 - 6247687
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    |||||| || ||| ||| ||||| ||||||||   ||||||||||| |||||||   |||||| |||||||| | |||||||||||| |||||    
T  6247595 cggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 18592068 - 18592132
Alignment:
Q  221 atgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||| | ||||| ||| ||||||| |   ||||||||||||||||||||| ||||||||    
T  18592068 atgccgacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcg 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 37411312 - 37411237
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||||| | |||||||||||||||||||   |||||| ||| ||||||||||||| ||||||||||||    
T  37411312 tgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacga 37411237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 18276494 - 18276579
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||| || || |||| ||| |||||||||| | ||||||||||||||||||| | |||||| ||||||||| ||||||||||||    
T  18276494 cggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 23717977 - 23718082
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    |||||| |||| ||||  |||||||||| || ||||||| |||||  ||||||| | ||||||||||||||| |||   |||||| ||||||||||||||    
T  23717977 ctatgaagcacggatacagacacggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T
Q  277 tcggtg 282  Q
    ||||||    
T  23718077 tcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 24105649 - 24105754
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    |||||| |||| ||||  |||||||||| || ||||||| |||||  ||||||| | ||||||||||||||| |||   |||||| ||||||||||||||    
T  24105649 ctatgaagcacggatacagacacggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T
Q  277 tcggtg 282  Q
    ||||||    
T  24105749 tcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 30404937 - 30404837
Alignment:
Q  198 acggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacat 297  Q
    ||||||| || ||||||| ||||| |||||||| ||||||||||||| |||||||   |||||| |||||||| | ||||||| |||| |||||| ||||    
T  30404937 acggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacat 30404838  T
Q  298 g 298  Q
    |    
T  30404837 g 30404837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 30527653 - 30527599
Alignment:
Q  227 acactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggt 281  Q
    |||||||||||||||||||||||||||  |||| | |||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 34691856 - 34691799
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||||||| ||||||||  |||||| ||||||||||||||||||||||| |||||    
T  34691856 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 34714268 - 34714211
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||||||| ||||||||  |||||| ||||||||||||||||||||||| |||||    
T  34714268 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 35449504 - 35449565
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    ||||| ||| ||||||||||||||||||||||||||   |||||| ||||||||||||||||    
T  35449504 tgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 20539786 - 20539674
Alignment:
Q  174 aacctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattata 272  Q
    ||||||||| |||| |||| |||||| ||||| || ||||||| ||||| | |||||| | ||||||||||| ||||||||  |||| | |||||||| |    
T  20539786 aacctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattaca 20539687  T
Q  273 tgtgtcggtgtcg 285  Q
     ||||||||||||    
T  20539686 agtgtcggtgtcg 20539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 5367200 - 5367263
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacat 297  Q
    |||||||||||| ||||||   |||||| ||||||||||||||||||||||| |||||| ||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacat 5367263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 18570980 - 18571043
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacat 297  Q
    ||||||||||||||||| |   ||||||||||||| ||||||||| ||||||||||||| ||||    
T  18570980 taataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacat 18571043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 18420502 - 18420436
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||| ||| |||||| |||||||||||||||||||   ||||||||| ||||||| ||||||||||    
T  18420502 tgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 39279666 - 39279732
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||| ||| |||| ||||||||| |||||||||||   |||||| |||||||||||||||||||||    
T  39279666 tgacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 896202 - 896275
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||| |||||||||| ||||| |||||||||||||   | ||||||||||| ||||||||||| |||| ||||    
T  896202 tgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggacac 896275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 4332919 - 4332981
Alignment:
Q  219 acatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||||||||||| |||||||||| ||||||||   |||||||||||||  |||||||||||||    
T  4332919 acatgccgacactgataataatttgggaaaatcacataattcaatgtaat--tatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 19536507 - 19536391
Alignment:
Q  177 ctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaa-tcattaaattcaatgtaattatatg 274  Q
    |||||| ||||||||| |||||| ||||| || ||||||| ||||| ||||||||   ||||||||||| |||| |||   |||||| |||||||| | |    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaag 19536408  T
Q  275 tgtcggtgtcgaacacg 291  Q
    ||||||||||| |||||    
T  19536407 tgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 19614183 - 19614235
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    ||||||| ||||||||||  |||||| ||||||||| ||||||||||||||||    
T  19614183 gacactgctaataatttggaaaaatctttaaattcagtgtaattatatgtgtc 19614235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 21616745 - 21616813
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgt 277  Q
    |||||||  |||| |||||||| | |||||||||||||||||||   |||||| |||||||||||||||    
T  21616745 acggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 34994011 - 34993975
Alignment:
Q  256 aattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||||||||||||||||||| |||||||||||||    
T  34994011 aattcaatgtaattatatgtgtcagtgtcgaacacga 34993975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 37558960 - 37559036
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||| |||||||| | ||||||||||  |||||||   ||||||||||||||| | ||||||||||||    
T  37558960 acggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 15972856 - 15972939
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| ||||| ||||||||  |||||||||||| ||||| |   |||||| |||||||| | |||||||||||| ||||||    
T  15972856 acggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacga 15972939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 16069330 - 16069263
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    ||||||| ||||| |||||||| ||||||||||| | ||||||||  |||||| ||||||||| ||||    
T  16069330 acggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 44860328 - 44860379
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||||||||||    |||||| |||||||||||||||||||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 1327976 - 1328039
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaaca 289  Q
    ||||||| | |||||||||||||||||||| ||||||| | ||||  |||||||||||||| ||||    
T  1327976 ccgacaccgctaataatttgagaaaatcataaaattcagtataat--tatgtgtcggtgtcaaaca 1328039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 21782886 - 21782832
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattat 271  Q
    ||||| |||||||||| |||||||||||||||||||   |||||| |||||||||    
T  21782886 tgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 27084260 - 27084302
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgta 266  Q
    ||||||||| ||||||||||||||||||||  |||||||||||    
T  27084260 ccgacactgctaataatttgagaaaatcatataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 31284045 - 31284115
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaatta-tatgtgtcggtgtcgaacacga 292  Q
    |||||||||| |||||||||||||||||||   ||| || |||||||| ||||||||||||| | ||||||    
T  31284045 gccgacactgctaataatttgagaaaatcacataatccattgtaattattatgtgtcggtgttggacacga 31284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 31808075 - 31808149
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||| | ||||||||| | |||||||   |||||| |||||||||||||||| |||| |||||||| |||||    
T  31808075 ccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatg 31808149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 6045967 - 6045918
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||||||| ||||||||  ||||||| ||| ||||||||||||||||    
T  6045967 taataatttgataaaatcatacaattcaaagtagttatatgtgtcggtgt 6045918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 18421946 - 18422027
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||| ||||| ||||||||  |||||||||| | || ||||   |||||| |||||||| | |||||||||||||||||    
T  18421946 acggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||||||||||||| |   ||||||||||||||| ||||||||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 14996332 - 14996224
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttg-agaaaatcattaaattcaatgtaattatatgt 275  Q
    |||||| |||| |||| |||| | |||| || ||||||| ||||| |||||||| | |||||||||| | ||||||||  |||| | |||||||| | ||    
T  14996332 ctatgaagcacggatacggacgcagacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagt 14996233  T
Q  276 gtcggtgtc 284  Q
    |||||||||    
T  14996232 gtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 20242834 - 20242722
Alignment:
Q  178 tatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgt 277  Q
    ||||| |||| |||| || ||| |||| || | ||||| ||||| ||||||||   ||||  ||| |||||||||   |||||| |||||||||||||||    
T  20242834 tatgaagcacggatacgggcacagacacgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgt 20242735  T
Q  278 cggtgtcgaacac 290  Q
    |||||||| ||||    
T  20242734 cggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 24975385 - 24975325
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| | |||||||||||||||||| |  |||||| ||||| |||||| ||||||||||    
T  24975385 cgacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcg 24975325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 35056883 - 35056927
Alignment:
Q  241 ttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||| |||  |||||| |||||||||||||||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcg 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 37491900 - 37491856
Alignment:
Q  240 tttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||||||| | | ||||||||||||||| |||||||||||||    
T  37491900 tttgagaaaataacttaattcaatgtaattaaatgtgtcggtgtc 37491856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 292
Target Start/End: Complemental strand, 42205908 - 42205828
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||||| ||||   ||||||||||||||||| | | |||| ||  |||| ||||||||||||| || ||||||    
T  42205908 gacattgacatgccaacaccaataataatttgagaaaatgacttaattgaaaataatcatatgtgtcggtgccggacacga 42205828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 3520415 - 3520345
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtg 282  Q
    |||||||||| || ||||| | |||| |||||||||||||||  |||||||||||||||||||||||||||    
T  3520415 gacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 7197370 - 7197292
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    |||||||||| |||||||| | ||||||||| | ||||||||| ||||||||||||||| | |||||||||||| ||||    
T  7197370 gacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacac 7197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 1433437 - 1433513
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    |||   |||||||||||||||||||||||    
T  1433437 acggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcg 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 7438697 - 7438764
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||||||||| ||||||||||||| |||||||   ||||||||||||||| | |||||||||||    
T  7438697 tgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 20549789 - 20549855
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||| | |||||||||||||||||||   |||||| ||||||||||||||||||||||| ||||    
T  20549789 ccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 22602778 - 22602710
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| |||||||| || ||| ||||||||||||||   |||||| |||||||||||||||||||||||    
T  22602778 tgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 27944989 - 27945100
Alignment:
Q  175 acctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatat 273  Q
    |||||||| |||| |||| |||||| ||||| || ||||||| ||||| ||||||||   ||||||||||||||||| |   |||||| |||||||| |     
T  27944989 acctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaa 27945088  T
Q  274 gtgtcggtgtcg 285  Q
    ||||||||||||    
T  27945089 gtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 21139066 - 21138996
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||||| | |||| ||||||||||||||||||||||  |||| | |||||||||||||||||||||||    
T  21139066 gacactgacatgtcaacaccgttaataatttgagaaaatcat--aatt-actgtaattatatgtgtcggtgtcg 21138996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 24339627 - 24339701
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||| |||||||| | ||||||||||| |||||||   |||||| |||||||| | ||||||||||||    
T  24339627 ggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 32308105 - 32308179
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| ||||| |||||||| | |||||||||||||||||||   |||||| ||||||| |||||||| ||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 6630985 - 6630912
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| ||||||||   ||||||||||||||| ||| | |||||| ||||||||||||||||| |||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcg 6630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 9482944 - 9482993
Alignment:
Q  236 ataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 15902794 - 15902879
Alignment:
Q  198 acggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||| || || |||| ||||||||||||||   ||||||||||| |||||||   |||| | |||||||||||||||||||||    
T  15902794 acggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 19206047 - 19206108
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||| | |||||||||||||||||||   |||||| | ||||||||||||||||||||    
T  19206047 gccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 23948385 - 23948450
Alignment:
Q  219 acatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||| |||||||| ||||||||||| ||||||| | |||| |||||||| ||||||||| |||||    
T  23948385 acatgtcgacactgataataatttgaaaaaatcaattaattgaatgtaatcatatgtgtcagtgtc 23948450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 26329455 - 26329382
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| |||||||  |||||||||||||||||| ||   |||||| |||||||||||||||||| ||||    
T  26329455 gacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcg 26329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 5548671 - 5548735
Alignment:
Q  221 atgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||| | | |||||||||||||||||   |||||| |||||||||||||||| ||||||    
T  5548671 atgccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcg 5548735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 24146814 - 24146874
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||| || ||||||||| |||||||||   |||||||| ||||||||||||||||||||    
T  24146814 ccgacaatgctaataattttagaaaatcacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 38134482 - 38134410
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggt 281  Q
    |||||||| ||||||  ||||| | ||||||||||||||||| |   ||||||||||||| ||||||||||||    
T  38134482 acggacatggacatgttgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 43249966 - 43250046
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcg 279  Q
    ||||||||| ||||||| ||||| |||||||| | ||||||||||||||||| |   ||| || |||||||||| ||||||    
T  43249966 cggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 3142135 - 3142080
Alignment:
Q  228 cactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||| |||||| ||||| |||||||  ||||||||||||| ||||||||||||||    
T  3142135 cactgctaataaattgagtaaatcatataattcaatgtaatcatatgtgtcggtgt 3142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 10377504 - 10377555
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatg 274  Q
    |||||||||||||||||| | ||||||||||  |||||| ||||||||||||    
T  10377504 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 16341496 - 16341555
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| |||||||||||||||||||   |||| | |||||||||||||| ||||||||    
T  16341496 gacactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcg 16341555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 26733287 - 26733370
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| ||||| | |||||| | ||||||||||| |||||||   |||||| | |||||| |||||||||||||| ||||||    
T  26733287 acggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacga 26733370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 3721077 - 3721158
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||| ||||||  ||||| || |||||||||||||||||||   |||| | | ||||||||||||||||||||| |||||    
T  3721077 acggacactgacatttcgaca-tgctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 21828481 - 21828407
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||| ||||| |||||||| |||| ||||||||||||||||   ||| || ||||||| |||||||| ||||    
T  21828481 acggacactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgtaattgtatgtgtcagtgt 21828407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 26022600 - 26022542
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||| || | ||  |||||| ||||| ||||||||||||||||||||||||    
T  26022600 taataatttgagcaagttatctaattcagtgtaactatatgtgtcggtgtcgaacacga 26022542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 29787445 - 29787383
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattat 271  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||   |||||| |||||||||    
T  29787445 acggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 7328764 - 7328691
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| ||| | ||| |||| ||||||||||||||||| |   |||| | |||||||||||||||||||||||    
T  7328764 gacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcg 7328691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 23128712 - 23128663
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||||||||||||| |||  |||||| |||||| ||||||||||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgt 23128663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaat 250  Q
    |||||| |||| |||| ||| ||||||| || ||||||| ||||| |||||||| | ||||||||||| |||||    
T  24105629 ctatgaagcacggatacggatacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 25481887 - 25481968
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||| ||||| |||||||| | ||||||||||| |||||||   |||||| |||||||| | |||| ||||||| ||||||    
T  25481887 ggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacga 25481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 30813759 - 30813836
Alignment:
Q  173 aaacctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaat 250  Q
    |||||||||| ||||||||| ||||||  ||| ||||| |||| ||| |  |||||| || |||||||||||||||||    
T  30813759 aaacctatgaagcacagatacggacacatacacgagacagacactgatactccgacattgctaataatttgagaaaat 30813836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 48246886 - 48246825
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatat 273  Q
    |||| ||||| | ||||||||||| ||||||||||||||||   || |||||||||||||||    
T  48246886 gacaatgacacgtcgacactgttattaatttgagaaaatcacacaactcaatgtaattatat 48246825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 21880160 - 21880224
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||||||||||||| |   |||||| |||||||| | |||||||||||| |||||| |||||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatg 21880224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 35297724 - 35297672
Alignment:
Q  233 ttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||||||||||||   |||||| | ||||||||||||| |||||||    
T  35297724 ttaataatttgagaaaatcacataattcattataattatatgtgttggtgtcg 35297672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 9709803 - 9709885
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||| ||||||||| |||| | |||||||||||||||||||   |||||  ||||||||||||||||||||||| |||||    
T  9709803 acggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 36878447 - 36878533
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||| ||||| |||||||| | |||||||||||||||||||   |||||| |||||||||| |||||||||||  ||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatg 36878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 6427333 - 6427409
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||| ||| |||| | |||||||||||||||||||   |||||||||||||||||||||| |||||||    
T  6427333 acggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 1864941 - 1864882
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    ||||||| |||||||||||||||||||||   |||||| |||||||||||||||||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 39130876 - 39130762
Alignment:
Q  177 ctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgt 275  Q
    |||||| |||| |||| |||||| ||||| || | ||| ||||||| || |||||| |||||||||| ||||||| ||  |||| | |||||||||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgt 39130777  T
Q  276 gtcggtgtcgaacac 290  Q
    |||||||||| ||||    
T  39130776 gtcggtgtcggacac 39130762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 52903232 - 52903314
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||||| | ||| ||||| || ||||||||||| | ||||||||  |||||| ||||||||||||||||||||||| |||||    
T  52903232 acggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 21530681 - 21530761
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||| |||||||| ||||||||||||||||||||||  ||||   | |||||||| |||||||||||| |||||| |||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatg 21530761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 298
Target Start/End: Complemental strand, 38078771 - 38078648
Alignment:
Q  177 ctatgacgcacagatatggacacggacaa--gagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatg 274  Q
    |||||| |||| |||| |||||||||||   || ||| ||| ||||| | |||||| | ||||||||||| |||||||   ||||||||||||||| | |    
T  38078771 ctatgaagcacggatacggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaag 38078672  T
Q  275 tgtcggtgtcgaacacgaaacatg 298  Q
    ||||||||||| |||||| |||||    
T  38078671 tgtcggtgtcggacacgacacatg 38078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 38503318 - 38503378
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||| | ||||||||||||||||||||  | |||| ||||||||||||||||||||||    
T  38503318 ccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 40181871 - 40181935
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||| |||||||||||||||||||   |||||| ||||||||||||| ||||||||| ||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 46348459 - 46348376
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| ||||| |||||||| | ||||||||||| ||||||||  |||| | |||||||| | |||||||||||| ||||||    
T  46348459 acggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacga 46348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 37598816 - 37598897
Alignment:
Q  210 cggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||| ||||| ||||||||   ||||||||||| |||||||  ||||||| |||||||||| |||||||||||| ||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcac-aaattcagtgtaattataagtgtcggtgtcggacacga 37598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 15641116 - 15641063
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||||| || ||||||| |||||||||||||||| ||||||||| |||||||||    
T  15641116 cggacatgacacggacactgacatgccgacactgctaataatttaagaaaatca 15641063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 27966045 - 27966008
Alignment:
Q  238 aatttgagaaaatcattaaattcaatgtaattatatgt 275  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27966045 aatttgagaaaatcattaaattcagtgtaattatatgt 27966008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 44482240 - 44482289
Alignment:
Q  236 ataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 13436455 - 13436523
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    |||||||||| ||||||||| || ||||||   |||||| ||||||||||||||| ||||||| |||||    
T  13436455 gccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 30847787 - 30847715
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacac 290  Q
    ||||||| ||||||| ||||||||||| ||||| |   ||||||||||||| ||||||||| |||| ||||||    
T  30847787 gacatgctgacactgctaataatttgaaaaaatgacataattcaatgtaatcatatgtgtcagtgttgaacac 30847715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 398851 - 398772
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||| |||||||   |||||| |||||||||| |||||    
T  398851 cggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 2896197 - 2896122
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||| ||||| |||||||| | |||||||||||||||||||   |||||| ||||  ||||| ||||||||||    
T  2896197 acggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 7918262 - 7918211
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||||   |||||| |||||||||||||||| ||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 7918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 13997869 - 13997940
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||| ||||| |||||||| |||||| |||| | |||||||   |||||| |||||||||||||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 19562689 - 19562622
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||| |||||||||| ||||||||||||||||||    | |||| ||||||||||||||| ||||||    
T  19562689 tgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtc 19562622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 5927426 - 5927340
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||||| ||||| ||  |||||| ||||||||||| ||||||||  |||| |||||||||| | ||||| ||||||    
T  5927426 cggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 6612257 - 6612171
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| || ||||||| ||||| ||||| || ||||||||||||| ||||| |   |||||| |||||||| | ||||||||||||    
T  6612257 cggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 14332693 - 14332635
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||||||||||||||||   |||| | ||||||||||||| ||||||||| ||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacga 14332635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 29163448 - 29163374
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||| |||||||| | ||| |||||  ||||||||   |||||||| ||||||||||||||||||||| ||||||    
T  29163448 gacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacacga 29163374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 25361896 - 25361945
Alignment:
Q  236 ataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||||||||||||   |||||| |||||||||||||||| ||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 34712464 - 34712383
Alignment:
Q  204 aagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||||||| |||  ||| ||||| ||||||||||||||||| |   |||| | |||||||||||||||| ||||||    
T  34712464 aagacacggacattaacacaccgtcactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcg 34712383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 1486777 - 1486709
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||| || ||||| | ||||||||||| |||||||   |||||| |||||||||| ||||||||||||    
T  1486777 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 9629960 - 9629900
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| | ||||||||||| ||||||||  |||||| ||| |||||| ||||||||||||    
T  9629960 cgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcg 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 19637799 - 19637839
Alignment:
Q  257 attcaatgtaattatatgtgtcggtgtcgaacacgaaacat 297  Q
    |||||||||||| |||||||||||||||| |||||| ||||    
T  19637799 attcaatgtaatcatatgtgtcggtgtcggacacgatacat 19637839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 20157410 - 20157350
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| | ||||||| |||||||||||   |||||| |||||| ||||||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 25098647 - 25098563
Alignment:
Q  194 ggacacggacaagagacg-gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgt 277  Q
    |||||||||||| ||||  ||||  |||| |||||||| | | |||||||||||||||||   |||||| |||||||||||||||    
T  25098647 ggacacggacaacagacacgacaaggacaagccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 31672969 - 31672889
Alignment:
Q  211 ggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacg 291  Q
    ||||| |||||  ||||||| | ||||||||||| ||||||| | |||||| |||||||| | || ||||||||| |||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacg 31672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 34371728 - 34371772
Alignment:
Q  241 ttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||||   |||||| |||||||||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 38076030 - 38075970
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||||| |||||||||||| ||||||   || ||| |||||| ||||||||||||||||    
T  38076030 cgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcg 38075970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 42359525 - 42359449
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||| || |||||   ||||||||||| |||||||  ||||||| |||||||| | ||||||||||||    
T  42359525 acggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 538 - 455
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| ||| | |||||||||| ||||||||||| |||||||  ||||||| |||||||| | |||||||||||| ||||||    
T  538 acggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacga 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 20120 - 20231
Alignment:
Q  175 acctatgacgcacagatatggacac-ggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatat 273  Q
    |||||||| ||||||||| |||||| ||||| || ||||||| ||||| |||||||| | ||||||||||| |||||||   |||||| |||||||| |     
T  20120 acctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaa 20219  T
Q  274 gtgtcggtgtcg 285  Q
    ||||| ||||||    
T  20220 gtgtcagtgtcg 20231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 9814 - 9747
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||| |   ||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  9814 gacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 135373 - 135312
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||| |||||||||||||||||||   |||||  |||||||||||||||||||||||    
T  135373 ccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 1636 - 1716
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||| |||||||| ||||||||||||||||||||||  ||||   | |||||||| |||||||||||| |||||| |||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatg 1716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 28847 - 28907
Alignment:
Q  223 gccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgt 283  Q
    |||||||| ||||||||||| ||||||||    ||||||||||||||||||||||||||||    
T  28847 gccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgt 28907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 3712560 - 3712516
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  3712560 taataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 40742574 - 40742650
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||||||| | ||||||||  |||||||||||||||||||||  |||  | ||||||||||||||||| |||||    
T  40742574 acggacattgaaacgccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcg 40742650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 12628693 - 12628618
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||||| |||| |||| ||| ||||||| || || |||| |||||||||||||| ||||||||||||| |||||||    
T  12628693 ctatgaagcacggatacggatacggacatgacactgacactgacatgccgacacagttaataatttgaaaaaatca 12628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 35952684 - 35952617
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| |||| ||||| ||||||||||| ||||||||  |||||||||||||||||||| || ||||||    
T  35952684 gacacgccgccactgctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcg 35952617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 18743860 - 18743906
Alignment:
Q  206 gagacggacattgacatgccgacactgttaataatttgagaaaatca 252  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||||    
T  18743860 gagacggacactgacatgccgacattgttaataatttgataaaatca 18743906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 35723458 - 35723384
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaat-cattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| |||||||| | ||||||||||||||||| ||   ||||||||||||||||||||||| ||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcg 35723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 23293072 - 23292979
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||| |||||||   |||||| | |||||| | |||||||||||| ||||||    
T  23293072 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacga 23292979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 8423779 - 8423711
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||| | |||||||||||||||||||   |||||| ||||||||||  ||||||||||| ||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacga 8423711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 13783264 - 13783340
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| |||||  ||||||| | |||| ||||||||| ||||  ||||||| |||||||||||||| ||||||||    
T  13783264 acggacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcg 13783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 5775410 - 5775359
Alignment:
Q  233 ttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||||||||||||||||   |||| | ||||||||||||||||||||||    
T  5775410 ttaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 21945476 - 21945575
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||||| || || |||| |||||||||||||| | ||||||||||| ||||| |   |||||| |||||||| | |||||||||||| ||| || |||||    
T  21945476 cggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatg 21945575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 22440660 - 22440609
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    |||||| |||||||||||||||||||||   |||||| ||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 40613441 - 40613504
Alignment:
Q  217 tgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcgg 280  Q
    ||||| |||||||| | ||||| |||||||||||||   |||||| ||||||||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 48139253 - 48139336
Alignment:
Q  215 attgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    ||||||| | |||||||||||||||||||||| ||||    |||| ||||||||||||||||| | ||||  |||||| |||||    
T  48139253 attgacacgtcgacactgttaataatttgagataatctcataatttaatgtaattatatgtgttgatgtcagacacgacacatg 48139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 49430993 - 49431092
Alignment:
Q  194 ggacacggacaagagacggacattgacatgccgacactgttaataatttg-agaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||||||| ||  |||||| ||||| |||||||| | |||||||||| | |||||||   |||||| |||||||| | |||||||||||| ||||||    
T  49430993 ggacacggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacga 49431092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 903905 - 903971
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgt 275  Q
    ||||||| |||||  ||| ||| |||||||||||||||||||||   |||||| |||||||||||||    
T  903905 acggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 7214573 - 7214523
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||||||||||||||   |||| |||||||||||||| |||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 33950144 - 33950194
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||||||||||||||   |||| |||||||| |||||||||||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 44081630 - 44081584
Alignment:
Q  232 gttaataatttgagaaaatcattaaattcaatgtaattatatgtgtc 278  Q
    ||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  44081630 gttaataatttgaaaaaatcatataatttaatgtaattatatgtgtc 44081584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 54580074 - 54580016
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    ||||||||||| |||||||   |||||| |||||||||| |||||||||||| ||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacga 54580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 15029751 - 15029824
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| ||||| || ||||||| ||||||||||| || ||||   |||||| ||||||||||||||| |||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 21539940 - 21539879
Alignment:
Q  212 gacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatat 273  Q
    |||| ||||||||||||||  |||||||||| ||||||||||  |||| | |||||||||||    
T  21539940 gacactgacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 40179688 - 40179623
Alignment:
Q  233 ttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacgaaacatg 298  Q
    |||||| ||||| |||||||   |||||| |||||||||||| |||||||||| |||||| |||||    
T  40179688 ttaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacacatg 40179623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 56257933 - 56257978
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattat 271  Q
    ||||||| ||||||||||||||||||||  |||||| |||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 3947874 - 3947766
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    |||||| || |||||| |||||||||||  | || ||||  ||||||||||||| | ||||||||||| ||||||    |||||| |||||||| | |||    
T  3947874 ctatgaagctcagatacggacacggacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtg 3947775  T
Q  277 tcggtgtcg 285  Q
    || ||||||    
T  3947774 tcagtgtcg 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 9996838 - 9996898
Alignment:
Q  224 ccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||||  ||||||||||||||||||   |||||| | ||||||||||| ||||||||    
T  9996838 ccgacactgacaataatttgagaaaatcacataattcagtataattatatgtctcggtgtc 9996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 26504359 - 26504303
Alignment:
Q  225 cgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggt 281  Q
    |||||||| ||||||||| |||||||||   | |||| |||||||||||||||||||    
T  26504359 cgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 46655 - 46742
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcga 286  Q
    |||||| || ||||||| ||||| |||||||| ||||||||||||| |||||||   |||||| |||||||| |  ||||||||||||    
T  46655 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcga 46742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 70270 - 70344
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||| |||||| ||||||||||||| ||||| |   |||||| |||||||||| |||||||||||| ||||||    
T  70270 gacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacga 70344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 240072 - 240022
Alignment:
Q  234 taataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  240072 taataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 8771 - 8864
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcgaacacga 292  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||| ||||||||   ||| | |||||||| | |||||||||||| ||||||    
T  8771 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacga 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 192345 - 192284
Alignment:
Q  189 gatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaat 250  Q
    |||| |||||| |||| || ||||||| ||||| |||||||| |||||||||||||||||||    
T  192345 gatacggacacagacacgatacggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 23371 - 23479
Alignment:
Q  177 ctatgacgcacagatatggacacggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtg 276  Q
    |||||| |||| |||| ||||||||||| || || |||| ||||| |||||||| | |||||| |  | |||||||   |||||| |||||||||| |||    
T  23371 ctatgaagcacggatacggacacggacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtg 23470  T
Q  277 tcggtgtcg 285  Q
    |||||||||    
T  23471 tcggtgtcg 23479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 21026 - 21098
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggt 281  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||   || ||  | |||||||||||||||||    
T  21026 acggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggt 21098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 263448 - 263372
Alignment:
Q  209 acggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||||| | |||||| |||||||||||||||| ||   |||||| |||||||||| ||||| ||||||    
T  263448 acggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcg 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 225354 - 225274
Alignment:
Q  199 cggacaagagacggacattgacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcg 279  Q
    |||||| || ||||||| ||||| |||||||| | ||||||||||||||||| |   ||| ||||||||||||| ||||||    
T  225354 cggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 6312 - 6371
Alignment:
Q  226 gacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    ||||||| ||||||||||| |||||     ||||||||||||||||||||||||||||||    
T  6312 gacactgctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcg 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 9890 - 9957
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||| |||||||| | ||||  ||| |||||||||| |||| || |||||||||||||||||||||||    
T  9890 gacacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 9957  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 90850 - 90901
Alignment:
Q  233 ttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtc 284  Q
    |||||||||||||||||||||  |||||| ||||||||||| ||||| ||||    
T  90850 ttaataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtc 90901  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 99885 - 99952
Alignment:
Q  218 gacatgccgacactgttaataatttgagaaaatcattaaattcaatgtaattatatgtgtcggtgtcg 285  Q
    |||||| |||||| | ||||||||| ||||||| |   |||||||||||||||||||||| |||||||    
T  99885 gacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcg 99952  T

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