View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4573-Insertion-3 (Length: 901)
Name: NF4573-Insertion-3
Description: NF4573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4573-Insertion-3 |
 | |
|
| [»] chr5 (6 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 831; Significance: 0; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 831; E-Value: 0
Query Start/End: Original strand, 7 - 901
Target Start/End: Complemental strand, 37836739 - 37835845
Alignment:
| Q |
7 |
agatgtaactcgcggaggttggtaaattctgccaaaaaccctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatatttctccaac |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37836739 |
agatgtaactcgcggaggttggtaaattctgccaaaaactctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatatttctccaac |
37836640 |
T |
|
| Q |
107 |
ttctcaaacttgatggaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttc |
206 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37836639 |
ttctcaaacttgatgggagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggtaaaggaccttc |
37836540 |
T |
|
| Q |
207 |
caagttgttttgagaaagatccaaaatcacaagactcacaagtttacctaactctgtcgatatgagccctgcaaaattgttcctcgacaaattactgtat |
306 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37836539 |
caagttgttgtgagaaagatccaaaatcacaagactcacaagcttacctaactctgtcgatatgagccctgcaaaattgttcctcgacaaattactgtat |
37836440 |
T |
|
| Q |
307 |
gtgagatatttgcaatttcccaaacttgatggaactggtccactgatattgttcttgctcaagtccatgtagttcaggttcaaattactttcaaaatcag |
406 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37836439 |
gtgagatttttgcaatttcccaaacttgatggaactggtccactgatattgttcttgctcaagtccatgtagttcaggttcaaattactctcaaaatcag |
37836340 |
T |
|
| Q |
407 |
gaagagacccggtgaaattattttcattgataatcaacctcatcagagtttcacatcttcctagatcagaaggtaggccaccttgaagttgattgattcc |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37836339 |
gaagagacccggtgaaattattttcattgataatcaacctcatcagagtttcacatcttcctagatcagaaggtatgccaccttgaagttgattgattcc |
37836240 |
T |
|
| Q |
507 |
catattgagcactgacaaatgctttccaaagcaaagattgggtgggatattaccactgaacttgttattcatacagtcgaacttcactatgctgctgttt |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
37836239 |
catattgagcactgacaaatgctttccaaagcaaagattgggtgggatattaccgctgaacttgttattcataccgtccaacttcactattctgctgttg |
37836140 |
T |
|
| Q |
607 |
attcctaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttaagctttgtcatctcgaaaggcagttccccag |
706 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37836139 |
attcctaagctttgaggtatgactcctgagaactgattatcaaacaatgagatattttttagatacttgagctttgtcatctcgaaaggcagttccccag |
37836040 |
T |
|
| Q |
707 |
agaggctgttgttgtgaaccaagatgttcacaagacttgaaattctccaaacactgaccggaattttgcctctcagtcggttgaaagacaattcaaggtt |
806 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37836039 |
agaggctgttgttgtgaaccaagatgttcacaagacttgaaattctccaaacactgaccggaattttgcctctcagtcggttgaaagacaattcaaggtc |
37835940 |
T |
|
| Q |
807 |
ctctaatttactgcaattaccaagagatgaaggaatagtccctgacaactgattaccatatagatacaacctcaatagatgagtcaagtttccaa |
901 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37835939 |
ctctaatttactgcaattaccaagagatgaaggaatagtccctgacaactgattaccatatagatacaacctcaatagatgagtcaagtttccaa |
37835845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 598; E-Value: 0
Query Start/End: Original strand, 10 - 901
Target Start/End: Complemental strand, 37850108 - 37849220
Alignment:
| Q |
10 |
tgtaactcgcggaggttggtaaattctgccaaaaaccctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatatttctccaacttc |
109 |
Q |
| |
|
|||||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37850108 |
tgtaactcgcggaggttgttaaaatttggcaaaaaccctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatgtttctccaacttc |
37850009 |
T |
|
| Q |
110 |
tcaaacttgatggaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttccaa |
209 |
Q |
| |
|
|||||||||||| | || |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| || || ||||| ||||||||||| |
|
|
| T |
37850008 |
ccaaacttgatgggactgatccatttaggaaattgaatcccacatcaaaatgatccattttagtacaatttgacagctgaagaggcaatggaccttccaa |
37849909 |
T |
|
| Q |
210 |
gttgttttgagaaagatccaaaatcacaagactcacaagtttacctaactctgtcgatatgagccctgcaaaattgttcctcgacaaattactgtatgtg |
309 |
Q |
| |
|
|||||| ||||||||||||||||||||| | ||||| || || | || || | |||||||| |||||| |||||||| ||||||||| ||||||| |
|
|
| T |
37849908 |
gttgtt---agaaagatccaaaatcacaaggtttacaaggtttcccagctgtgatggtatgagccgtgcaaatttgttccttgacaaattaatgtatgta |
37849812 |
T |
|
| Q |
310 |
agatatttgcaatttcccaaacttgatggaactggtccactgatattgttcttgctcaagtccatgtagttcaggttcaaattactttcaaaatcaggaa |
409 |
Q |
| |
|
|||| | |||||||||||||||||||||||| |||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
37849811 |
agatttgtgcaatttcccaaacttgatggaatccgtccactgattttgttcttactcatgtccatgtatttcaggttcaaattactttcaaaatcgggaa |
37849712 |
T |
|
| Q |
410 |
gagacccggtgaaattattttcattgataatcaacctcatcagagtttcacatcttcctagatcagaaggtaggccaccttgaagttgattgattcccat |
509 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37849711 |
gagacccggtgaaattattttcattgagaaacaacctcatcagagtttcacatcttcctacatcagaaggtatattgccttgaagttgattgattcccat |
37849612 |
T |
|
| Q |
510 |
attgagcactgacaaatgctttccaaagcaaagattgggtgggatattaccactgaacttgttattcatacagtcgaacttcactatgctgctgtttatt |
609 |
Q |
| |
|
|| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37849611 |
gtttagcactagcaaatgctttccaaagcaaatattgggtgggatattaccactgaacttgttattcatacagtccaacttcactatgctgctgtttatt |
37849512 |
T |
|
| Q |
610 |
cctaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttaagctttgtcatctcgaaaggcagttccccagaga |
709 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
37849511 |
cccaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttgagctttgtcatctcgaaaggtagttccctggaga |
37849412 |
T |
|
| Q |
710 |
ggctgttgttgtgaaccaagatgttcacaagacttgaaattctccaaacactgaccggaattttgcctctcagtcggttgaaagacaattcaaggttctc |
809 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||| |
|
|
| T |
37849411 |
ggctgttgttgtgaaccaatatgtgcacaagacttgaaattctccaaacactgaccggaatttcgcctctcaaacggttgaaagaaaattcaaggtcctc |
37849312 |
T |
|
| Q |
810 |
taatttactgcaattaccaagagatgaaggaatagtccctgacaactgattaccatatagatacaacctcaatagatgagtcaagtttccaa |
901 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37849311 |
taatttgctgcaattaccaagagatgtaggaatagtccctgacaactgattaccatatagatacaacctcaatagacgagtcaagtttccaa |
37849220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 10 - 901
Target Start/End: Complemental strand, 37842355 - 37841464
Alignment:
| Q |
10 |
tgtaactcgcggaggttggtaaattctgccaaaaaccctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatatttctccaacttc |
109 |
Q |
| |
|
|||||||| || ||||| |||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
37842355 |
tgtaactcacgaaggtttctaaatttagctaaaaactctgggatacctcctgtgaagtaattttctcttaaaatcaatgtggttatgtttgtccaacttc |
37842256 |
T |
|
| Q |
110 |
tcaaacttgatggaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttccaa |
209 |
Q |
| |
|
||||| ||||||| |||| ||||||||||||||||||||| | |||||| ||||||| | | ||| |||||||| || |||||| |||||||||||| |
|
|
| T |
37842255 |
tcaaatttgatgggagtgatccatttaggaaattgaatcctatatcaaaacgatccatgtgactacagtttgacagctgatgtggcagaggaccttccaa |
37842156 |
T |
|
| Q |
210 |
gttgttttgagaaagatccaaaatcacaagactcacaagtttacctaactctgtcgatatgagccctgcaaaattgttcctcgacaaattactgtatgtg |
309 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| ||| || || || ||||||| | ||| || | |||||| |||||||| |||| |||| ||||||| |
|
|
| T |
37842155 |
gttgttgtgagaaagttccaaaatcacaagattcaataggtttcccaactctgatggtataagtcgtgcaaatttgttccttgacagattaatgtatgtc |
37842056 |
T |
|
| Q |
310 |
agatatttgcaatttcccaaacttgatggaactggtccactgatattgttcttgctcaagtccatgtagttcaggttcaaattactttcaaaatcaggaa |
409 |
Q |
| |
|
|||| | |||||||||||||||| ||||||| ||| || ||||||||||||||||| | ||||||||| |||||||| | ||||||| |||||||||||| |
|
|
| T |
37842055 |
agatttgtgcaatttcccaaactcgatggaattggcccgctgatattgttcttgcttatgtccatgtatttcaggttaagattacttgcaaaatcaggaa |
37841956 |
T |
|
| Q |
410 |
gagacccggtgaaattattttcattgataatcaacctcatcagagtttcacatcttcctagatcagaaggtaggccaccttgaagttgattgattcccat |
509 |
Q |
| |
|
| ||||||||||||||||||| ||||| || ||||||| | |||||| | |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
37841955 |
gcgacccggtgaaattattttgattgagaaacaacctccttagagttgcgcatcttccaagatcagaaggtatgccaccttgtagttgattgattcccat |
37841856 |
T |
|
| Q |
510 |
attgagcactgacaaatgctttccaaagcaaagattgggtgggatattaccactgaacttgttattcatacagtcgaacttcactatgctgctgtttatt |
609 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||| |
|
|
| T |
37841855 |
attgagctctaacaaatgctttccaaagcaaagattgggtgggatattgccattgaacttgttattcatacagtccaacttcactatactgctgttgatt |
37841756 |
T |
|
| Q |
610 |
cctaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttaagctttgtcatctcgaaaggcagttccccagaga |
709 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||| ||||| ||||||| |
|
|
| T |
37841755 |
cccaagctttgaggtatgactcctgagaactgattatcaaacaatgagatatttcttagatacttgagctctgtcatctcaaaaggtagttctccagaga |
37841656 |
T |
|
| Q |
710 |
ggctgttgttgtgaaccaagatgttcacaagacttgaaattctccaaacactgaccggaattttgcctctcagtcggttgaaagacaattcaaggttctc |
809 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||| ||||||| ||||||||||| || | ||||| ||| |
|
|
| T |
37841655 |
ggctgttgttgtgaaccaagatgtgcaaaagactttgtattctccaaacaaagaccggaatttcacctctcaaacggttgaaagataagttaaggtcctc |
37841556 |
T |
|
| Q |
810 |
taatttactgcaattaccaagagatgaaggaatagtccctgacaactgattaccatatagatacaacctcaatagatgagtcaagtttccaa |
901 |
Q |
| |
|
|| |||||| |||||||||| || |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37841555 |
tagtttactacaattaccaatagctgaaggaatagtccctgaaaacatattacgatgtagatacaacctcaatagatgagtcaagtttccaa |
37841464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 10 - 901
Target Start/End: Complemental strand, 37831032 - 37830141
Alignment:
| Q |
10 |
tgtaactcgcggaggttggtaaattctgccaaaaaccctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatatttctccaacttc |
109 |
Q |
| |
|
|||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||| |
|
|
| T |
37831032 |
tgtaactcacgaaggttgctaaattctgtcaaaaaccctgggatacctccagtgaagtaattttctctgaaaatcaatgtagttatgcgtgcccaacttc |
37830933 |
T |
|
| Q |
110 |
tcaaacttgatggaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttccaa |
209 |
Q |
| |
|
||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||||| ||| ||||| || |||||||||||||||||||| |
|
|
| T |
37830932 |
tcaaacttgatgggagtgatccatttaagaaattgaatcccacatcaaaacgatccattttagcacagtttgaaagcctaagtggcaaaggaccttccaa |
37830833 |
T |
|
| Q |
210 |
gttgttttgagaaagatccaaaatcacaagactcacaagtttacctaactctgtcgatatgagccctgcaaaattgttcctcgacaaattactgtatgtg |
309 |
Q |
| |
|
|| || |||| ||||||||||||||||||| ||||||| || || | || | | |||||| |||||||| ||||| || ||||||||| |||||| | |
|
|
| T |
37830832 |
attattgtgagcaagatccaaaatcacaagattcacaaggtttccaagctgtaatggtatgagtcctgcaaatttgtttcttgacaaattaatgtatgcg |
37830733 |
T |
|
| Q |
310 |
agatatttgcaatttcccaaacttgatggaactggtccactgatattgttcttgctcaagtccatgtagttcaggttcaaattactttcaaaatcaggaa |
409 |
Q |
| |
|
|||| | ||||||||||||||||||||| || |||||||| |||||||| ||||| | ||||||||| |||||||| | ||||||| ||||||| |||| |
|
|
| T |
37830732 |
agatttgtgcaatttcccaaacttgatgtaattggtccaccaatattgtttttgcttatgtccatgtatttcaggttaagattacttgcaaaatcgggaa |
37830633 |
T |
|
| Q |
410 |
gagacccggtgaaattattttcattgataatcaacctcatcagagtttcacatcttcctagatcagaaggtaggccaccttgaagttgattgattcccat |
509 |
Q |
| |
|
| |||||||||||||||||| ||||| || ||||||| | |||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
37830632 |
gcaacccggtgaaattattttgattgagaaacaacctccttagagttgcacatcttcctagatcagaaggtatgccaccttgtagttgattgattcccat |
37830533 |
T |
|
| Q |
510 |
attgagcactgacaaatgctttccaaagcaaagattgggtgggatattaccactgaacttgttattcatacagtcgaacttcactatgctgctgtttatt |
609 |
Q |
| |
|
|||||| || |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
37830532 |
gttgagctctaacaaatgctttccaaaacaaagatttggtgggatattaccactgaacttgttattcatacagtccaacttcactatgctgctgttgatt |
37830433 |
T |
|
| Q |
610 |
cctaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttaagctttgtcatctcgaaaggcagttccccagaga |
709 |
Q |
| |
|
|| |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||| || || ||||| ||||||||| ||| |
|
|
| T |
37830432 |
cccaagctttgaggtatgactcctgagaactgattttcaaacaatgagacattttttagacacttaaggtttgtgatttccaaaggtagttccccaaaga |
37830333 |
T |
|
| Q |
710 |
ggctgttgttgtgaaccaagatgttcacaagacttgaaattctccaaacactgaccggaattttgcctctcagtcggttgaaagacaattcaaggttctc |
809 |
Q |
| |
|
| |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||| || |
|
|
| T |
37830332 |
gatcgttgttgtgaaccaagatgtgcacaagactttgaattctccaaatactgaccggaatttcacctctcaaacggttgaaagacaaatcaaggtcttc |
37830233 |
T |
|
| Q |
810 |
taatttactgcaattaccaagagatgaaggaatagtccctgacaactgattaccatatagatacaacctcaatagatgagtcaagtttccaa |
901 |
Q |
| |
|
| |||||||||||| ||||||||||||||||| |||||||| ||| ||||| || |||||||||||| ||||||| ||||| |||||||| |
|
|
| T |
37830232 |
aagtttactgcaattgccaagagatgaaggaatggtccctgaaaacatattactatgtagatacaaccttaatagattagtcatgtttccaa |
37830141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 578 - 663
Target Start/End: Original strand, 26640749 - 26640834
Alignment:
| Q |
578 |
tacagtcgaacttcactatgctgctgtttattcctaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattt |
663 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||| |||||||||||| || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
26640749 |
tacagtctaacttcacaatgctgctgttgattcccaagctttgaggtatgcctcctgagaactgattgtcaaacaatgagatattt |
26640834 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 465 - 533
Target Start/End: Complemental strand, 37821587 - 37821519
Alignment:
| Q |
465 |
tcctagatcagaaggtaggccaccttgaagttgattgattcccatattgagcactgacaaatgctttcc |
533 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
37821587 |
tcctagatcagaaggtatgccaccttgaagttgattgattcccatgttgagctctaacaaatgctttcc |
37821519 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 22 - 901
Target Start/End: Complemental strand, 36865471 - 36864606
Alignment:
| Q |
22 |
aggttggtaaattctgccaaaaaccctgggatacctccagtgaagtaattttctcttaaaatcaatgtggttatatttctccaacttctcaaacttgatg |
121 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| || ||||| | ||| ||||| || | ||||||| |||| |||||||||| |||||||||||| |
|
|
| T |
36865471 |
aggttgctaaattctgccaaaaaccctgggataccccctgtgaaatgattatctctcaagaccaatgtgcttatgcctctccaacttatcaaacttgatg |
36865372 |
T |
|
| Q |
122 |
gaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttccaagttgttttgaga |
221 |
Q |
| |
|
| | || |||||||||||||||||||||||| ||||| ||||||| |||| ||||||||| | || ||||| ||||||||||||||||| ||||| |
|
|
| T |
36865371 |
ggaatgatccatttaggaaattgaatcccacgtcaaaacgatccatgttagtacaatttgaaaa----agaggcaatggaccttccaagttgttgtgaga |
36865276 |
T |
|
| Q |
222 |
aagatccaaaatcacaagactcacaagtttacctaactctgtcgatatgagccctgcaaaattgttcctcgacaaattactgtatgtgagatatttgcaa |
321 |
Q |
| |
|
||||||||||||||||||| ||||||| || || | |||| | ||||||||||||||| ||||| || ||||||||| ||||||| |||| || || |
|
|
| T |
36865275 |
aagatccaaaatcacaagattcacaaggtttcccagctctaatggtatgagccctgcaaatttgttgcttgacaaattaatgtatgtaagattagtgtaa |
36865176 |
T |
|
| Q |
322 |
tttcccaaacttgatggaactggtccactgatattgttcttgctcaagtccatgtagttcaggttcaaattactttcaaaatcaggaagagacccggtga |
421 |
Q |
| |
|
||||||||||||||||| | ||||||| |||| |||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
36865175 |
tttcccaaacttgatggtatcggtccaccgatactgttcttgctcatgtccatgtatttcaggttcatattactttcaaaatcgggaagagacccggtga |
36865076 |
T |
|
| Q |
422 |
aattattttcattgataatcaacctcatcagagtttcacatcttcctagatcagaaggtaggccaccttgaagttgattgattcccatattgagcactga |
521 |
Q |
| |
|
||||||||||||||| || ||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||| | ||||| || | |
|
|
| T |
36865075 |
aattattttcattgaaaaacaa-----tcagagtttcacatcttcctatatcagaaggaatgccaccttgaagttgattaattccgacgttgaggtctaa |
36864981 |
T |
|
| Q |
522 |
caaatgctttccaaagcaaagattgggtgggatattaccactgaacttgttattcatacagtcgaacttcactatgctgctgtttattcctaagctttga |
621 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||| |||||||||| | | |||| ||||| ||||||||| |
|
|
| T |
36864980 |
caaatgctttccaaagcaaagatttggtgggatattaccattaaacttgttattcatac-gtccaacttcactaaggtattgttgattcccaagctttga |
36864882 |
T |
|
| Q |
622 |
ggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttaagctttgtcatctcgaaaggcagttccccagagaggctgttgttgt |
721 |
Q |
| |
|
|| ||||||||||||||||||| |||||||||||||||||||| | || || ||||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
36864881 |
ggaatgactcctgagaactgattg-------atgagatattttttagatacctgaggttcgtcatttcgaaaggtagttccccagagaggctgttgtggt |
36864789 |
T |
|
| Q |
722 |
gaaccaagatgttcacaagacttgaaattctccaaacactgaccggaattttgcctctcagtcggttgaaagacaattcaaggttctctaatttactgca |
821 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||| |||| || ||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
36864788 |
gaaccaagatatgcacaaggcttgaaattctccaaatactggcctgaatttttcctctcaaacggttgaaagacaattcaaggtcctctagtttactgca |
36864689 |
T |
|
| Q |
822 |
attaccaagagatgaaggaatagtccctgacaactgattaccatatag---atacaacctcaatagatgagtcaagtttccaa |
901 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
36864688 |
gttaccaagagatgaaggaatagtccctgaaaacatattaccatatagataatacagtctcaatagatgagtcaagtttccaa |
36864606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 111 - 261
Target Start/End: Complemental strand, 45561235 - 45561085
Alignment:
| Q |
111 |
caaacttgatggaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttccaag |
210 |
Q |
| |
|
|||||||||||| | || ||||||| ||| || |||||||||||||||| |||||||||| |||||||||||| || | ||||||||| ||||| ||| |
|
|
| T |
45561235 |
caaacttgatggcaatgaaccatttaagaagttaaatcccacatcaaacttgtccattttagtacaatttgacagctgaaatggcaaaggtccttctaag |
45561136 |
T |
|
| Q |
211 |
ttgttttgagaaagatccaaaatcacaagactcacaagtttacctaactct |
261 |
Q |
| |
|
||||| ||| |||| |||| || |||| ||||||| || ||||||||| |
|
|
| T |
45561135 |
ttgttgtgatcaagaatcaaagtccgaagattcacaaggtttcctaactct |
45561085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 704
Target Start/End: Complemental strand, 45560748 - 45560642
Alignment:
| Q |
598 |
ctgctgtttattcctaagctttgaggtgtgactcctgagaactgattatcaaacaatgagatattttttagatacttaagctttgtcatctcgaaaggca |
697 |
Q |
| |
|
||||| || ||||| |||||||||||| ||||||| |||||| | || |||||||||||||| ||||| || | ||| |||| ||||||||| | ||| | |
|
|
| T |
45560748 |
ctgctattgattcccaagctttgaggtatgactccagagaacaggttgtcaaacaatgagatgtttttgaggttcttgagctctgtcatctccacaggaa |
45560649 |
T |
|
| Q |
698 |
gttcccc |
704 |
Q |
| |
|
||||||| |
|
|
| T |
45560648 |
gttcccc |
45560642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 40541269 - 40541171
Alignment:
| Q |
114 |
acttgatggaagtgttccatttaggaaattgaatcccacatcaaactgatccattttagaacaatttgacagttggagtggcaaaggaccttccaagtt |
212 |
Q |
| |
|
||||||||||| | ||||| ||||||||||||||||||||||| | |||||| | ||| ||||| ||||| |||||||||||||||| ||||| |
|
|
| T |
40541269 |
acttgatggaaacgaaccattaaggaaattgaatcccacatcaaatacactcattttggtacactttgaaagttgatgtggcaaaggaccttctaagtt |
40541171 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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