View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4573-Insertion-4 (Length: 715)

Name: NF4573-Insertion-4
Description: NF4573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4573-Insertion-4
NF4573-Insertion-4
[»] chr7 (66 HSPs)
chr7 (8-715)||(32941952-32942663)
chr7 (522-686)||(46147228-46147393)
chr7 (8-103)||(32948687-32948782)
chr7 (451-590)||(13852250-13852389)
chr7 (457-564)||(8568582-8568689)
chr7 (452-715)||(29211512-29211788)
chr7 (475-608)||(48642745-48642883)
chr7 (452-653)||(29628050-29628244)
chr7 (528-653)||(43202447-43202573)
chr7 (527-695)||(37375341-37375518)
chr7 (455-610)||(40848796-40848956)
chr7 (469-608)||(23729347-23729486)
chr7 (454-653)||(26524881-26525079)
chr7 (456-578)||(6880120-6880241)
chr7 (524-598)||(20306629-20306699)
chr7 (163-270)||(32948466-32948576)
chr7 (100-200)||(32900826-32900926)
chr7 (523-581)||(35820098-35820156)
chr7 (451-576)||(524882-525007)
chr7 (467-589)||(26215123-26215249)
chr7 (451-576)||(27054748-27054873)
chr7 (452-576)||(7209285-7209409)
chr7 (456-576)||(16535759-16535879)
chr7 (456-576)||(16629783-16629903)
chr7 (651-706)||(27456498-27456553)
chr7 (451-583)||(34750929-34751061)
chr7 (467-600)||(23032631-23032769)
chr7 (522-590)||(12117612-12117680)
chr7 (92-200)||(32923806-32923914)
chr7 (522-581)||(10671833-10671892)
chr7 (647-706)||(11834345-11834404)
chr7 (473-577)||(31287794-31287898)
chr7 (522-581)||(47069681-47069740)
chr7 (522-581)||(47204468-47204527)
chr7 (469-576)||(8118296-8118403)
chr7 (530-610)||(47646697-47646782)
chr7 (472-608)||(7697247-7697387)
chr7 (522-590)||(8768965-8769033)
chr7 (523-575)||(20334597-20334649)
chr7 (467-576)||(47903205-47903314)
chr7 (522-581)||(3213233-3213292)
chr7 (657-704)||(6879979-6880026)
chr7 (648-695)||(22701204-22701251)
chr7 (522-576)||(11206374-11206428)
chr7 (92-134)||(32911872-32911914)
chr7 (452-610)||(10338793-10338950)
chr7 (649-694)||(25007474-25007519)
chr7 (527-653)||(2308046-2308180)
chr7 (527-590)||(32237665-32237729)
chr7 (525-581)||(43429191-43429247)
chr7 (651-706)||(1812627-1812682)
chr7 (647-706)||(7697431-7697490)
chr7 (648-695)||(10338699-10338746)
chr7 (456-715)||(11399064-11399349)
chr7 (652-706)||(22298679-22298734)
chr7 (522-588)||(27456372-27456443)
chr7 (522-581)||(33434124-33434183)
chr7 (648-715)||(41459319-41459386)
chr7 (648-686)||(20306750-20306788)
chr7 (647-685)||(26215004-26215042)
chr7 (623-653)||(27215135-27215165)
chr7 (522-596)||(36875335-36875409)
chr7 (677-715)||(40849044-40849082)
chr7 (648-685)||(2734481-2734518)
chr7 (467-573)||(5932653-5932759)
chr7 (527-576)||(25007348-25007397)
[»] chr5 (50 HSPs)
chr5 (452-653)||(27571981-27572185)
chr5 (452-610)||(20191961-20192119)
chr5 (531-600)||(6633341-6633410)
chr5 (467-581)||(35240835-35240949)
chr5 (452-598)||(25495027-25495178)
chr5 (467-572)||(40331510-40331615)
chr5 (452-576)||(36567664-36567788)
chr5 (523-581)||(17132101-17132159)
chr5 (532-706)||(36760136-36760316)
chr5 (474-576)||(40884295-40884397)
chr5 (452-581)||(22747584-22747712)
chr5 (522-580)||(1048725-1048783)
chr5 (522-608)||(14652465-14652551)
chr5 (477-607)||(18432046-18432183)
chr5 (647-695)||(25495233-25495281)
chr5 (523-599)||(28224857-28224933)
chr5 (523-583)||(32244385-32244445)
chr5 (527-610)||(41454881-41454969)
chr5 (527-590)||(9161001-9161064)
chr5 (522-581)||(11917418-11917477)
chr5 (449-581)||(15068400-15068532)
chr5 (471-558)||(2588936-2589023)
chr5 (648-702)||(6633467-6633521)
chr5 (543-653)||(18845545-18845655)
chr5 (647-693)||(33792815-33792861)
chr5 (467-576)||(333293-333402)
chr5 (522-582)||(35358949-35359009)
chr5 (647-695)||(41455016-41455064)
chr5 (522-581)||(36177116-36177175)
chr5 (451-583)||(38433639-38433771)
chr5 (523-581)||(8409004-8409062)
chr5 (522-576)||(27886432-27886486)
chr5 (453-556)||(30265827-30265930)
chr5 (648-681)||(18432233-18432266)
chr5 (467-558)||(40692453-40692543)
chr5 (529-581)||(6594997-6595049)
chr5 (523-583)||(36103620-36103680)
chr5 (527-590)||(2226886-2226949)
chr5 (467-514)||(10090263-10090310)
chr5 (526-576)||(667630-667680)
chr5 (619-653)||(733968-734002)
chr5 (619-653)||(6367781-6367815)
chr5 (522-576)||(12166180-12166234)
chr5 (537-571)||(12379044-12379078)
chr5 (452-514)||(12379092-12379154)
chr5 (522-576)||(30002024-30002078)
chr5 (522-576)||(40109615-40109669)
chr5 (522-576)||(42544671-42544725)
chr5 (527-576)||(2422824-2422873)
chr5 (648-685)||(2422947-2422984)
[»] chr4 (66 HSPs)
chr4 (452-641)||(36106372-36106560)
chr4 (452-653)||(5122323-5122524)
chr4 (453-653)||(48293351-48293544)
chr4 (471-653)||(48338303-48338483)
chr4 (451-581)||(23120268-23120398)
chr4 (451-590)||(40900085-40900224)
chr4 (471-576)||(23450000-23450105)
chr4 (523-608)||(18396342-18396427)
chr4 (452-653)||(32223256-32223459)
chr4 (452-590)||(20986364-20986507)
chr4 (452-583)||(40806827-40806958)
chr4 (524-653)||(48602465-48602587)
chr4 (455-576)||(5261980-5262101)
chr4 (467-576)||(21069003-21069112)
chr4 (457-599)||(42198737-42198873)
chr4 (522-581)||(29636786-29636845)
chr4 (484-590)||(54274022-54274125)
chr4 (452-583)||(10778482-10778613)
chr4 (523-581)||(19753532-19753590)
chr4 (523-581)||(19786216-19786274)
chr4 (451-590)||(32136634-32136773)
chr4 (543-654)||(18319506-18319615)
chr4 (543-654)||(18399066-18399175)
chr4 (522-581)||(29644136-29644195)
chr4 (522-581)||(50570969-50571028)
chr4 (523-581)||(15723895-15723953)
chr4 (522-575)||(14866789-14866842)
chr4 (528-581)||(18536655-18536708)
chr4 (647-692)||(23625794-23625839)
chr4 (471-573)||(45983345-45983447)
chr4 (619-706)||(6101991-6102089)
chr4 (531-610)||(11031617-11031701)
chr4 (523-610)||(23625878-23625970)
chr4 (524-576)||(29232767-29232819)
chr4 (451-576)||(48996026-48996151)
chr4 (452-540)||(6333259-6333347)
chr4 (525-604)||(28147795-28147874)
chr4 (647-706)||(29232891-29232950)
chr4 (532-598)||(29335108-29335179)
chr4 (522-581)||(42557737-42557796)
chr4 (452-556)||(43630520-43630624)
chr4 (648-715)||(46471582-46471649)
chr4 (647-689)||(21069198-21069240)
chr4 (522-576)||(30193991-30194045)
chr4 (452-558)||(4642364-4642470)
chr4 (523-576)||(23937534-23937587)
chr4 (523-576)||(36077586-36077639)
chr4 (527-608)||(40494440-40494521)
chr4 (648-684)||(4688824-4688860)
chr4 (620-693)||(31109448-31109517)
chr4 (671-715)||(36106330-36106374)
chr4 (648-692)||(42198931-42198975)
chr4 (648-692)||(49640989-49641033)
chr4 (467-506)||(5061294-5061333)
chr4 (523-610)||(8311898-8311985)
chr4 (648-695)||(8312036-8312083)
chr4 (91-134)||(11824011-11824054)
chr4 (647-706)||(27743343-27743402)
chr4 (647-706)||(28147926-28147984)
chr4 (523-589)||(4688690-4688756)
chr4 (677-715)||(18536495-18536533)
chr4 (620-653)||(26674223-26674256)
chr4 (471-500)||(27743181-27743210)
chr4 (677-706)||(48338528-48338557)
chr4 (523-576)||(49640861-49640914)
chr4 (648-689)||(51907215-51907256)
[»] chr8 (44 HSPs)
chr8 (452-715)||(44336714-44336993)
chr8 (452-610)||(40436378-40436537)
chr8 (452-610)||(9012819-9012972)
chr8 (455-558)||(22811207-22811310)
chr8 (527-653)||(6591245-6591374)
chr8 (452-576)||(10661096-10661220)
chr8 (451-583)||(33068207-33068339)
chr8 (470-573)||(7428452-7428555)
chr8 (452-558)||(11218892-11218998)
chr8 (452-581)||(15272317-15272446)
chr8 (452-581)||(15452686-15452815)
chr8 (527-653)||(6616940-6617069)
chr8 (472-598)||(4785198-4785329)
chr8 (523-581)||(36340771-36340829)
chr8 (451-581)||(5803257-5803387)
chr8 (473-607)||(19539346-19539475)
chr8 (451-576)||(36910347-36910472)
chr8 (527-581)||(31497610-31497664)
chr8 (523-581)||(33565970-33566028)
chr8 (467-581)||(24682102-24682215)
chr8 (522-591)||(35688406-35688475)
chr8 (452-545)||(12883777-12883870)
chr8 (466-583)||(45366264-45366381)
chr8 (522-581)||(3006583-3006642)
chr8 (455-511)||(28441432-28441488)
chr8 (619-653)||(12074129-12074163)
chr8 (647-705)||(12193344-12193402)
chr8 (647-705)||(12437772-12437830)
chr8 (523-581)||(14549237-14549295)
chr8 (650-704)||(24681965-24682019)
chr8 (647-704)||(11017154-11017211)
chr8 (647-704)||(33566096-33566153)
chr8 (647-695)||(18755218-18755266)
chr8 (647-695)||(30254008-30254056)
chr8 (471-576)||(44672750-44672855)
chr8 (467-506)||(11017022-11017061)
chr8 (452-576)||(28073207-28073331)
chr8 (531-610)||(41345912-41345991)
chr8 (529-598)||(6649539-6649613)
chr8 (527-573)||(12660275-12660321)
chr8 (532-590)||(18170027-18170085)
chr8 (452-514)||(31497687-31497749)
chr8 (451-504)||(4267842-4267895)
chr8 (648-677)||(38926336-38926365)
[»] chr2 (37 HSPs)
chr2 (454-653)||(28790450-28790648)
chr2 (452-715)||(27301352-27301624)
chr2 (452-653)||(17762684-17762884)
chr2 (452-610)||(41461024-41461182)
chr2 (452-653)||(1330952-1331147)
chr2 (452-576)||(12041605-12041729)
chr2 (648-715)||(41166332-41166399)
chr2 (452-577)||(5862646-5862771)
chr2 (528-653)||(13193917-13194040)
chr2 (452-576)||(44979785-44979909)
chr2 (451-610)||(42785611-42785770)
chr2 (476-610)||(30761738-30761872)
chr2 (452-653)||(44085431-44085625)
chr2 (450-573)||(15320598-15320721)
chr2 (456-608)||(36500621-36500765)
chr2 (455-576)||(44035251-44035373)
chr2 (467-576)||(12884488-12884592)
chr2 (522-609)||(30759626-30759718)
chr2 (528-595)||(4657750-4657817)
chr2 (522-581)||(36413651-36413710)
chr2 (527-607)||(11678014-11678092)
chr2 (527-607)||(11695492-11695570)
chr2 (451-581)||(16578577-16578707)
chr2 (650-697)||(12884667-12884714)
chr2 (619-653)||(6946491-6946525)
chr2 (522-576)||(9811403-9811457)
chr2 (544-590)||(20985903-20985949)
chr2 (532-581)||(12841563-12841612)
chr2 (455-573)||(25298270-25298388)
chr2 (482-576)||(36075372-36075466)
chr2 (648-704)||(6946429-6946485)
chr2 (679-715)||(36500492-36500528)
chr2 (452-556)||(17916887-17916991)
chr2 (455-514)||(43452100-43452159)
chr2 (522-576)||(11375914-11375968)
chr2 (648-715)||(31719938-31720013)
chr2 (623-653)||(31720019-31720049)
[»] chr3 (49 HSPs)
chr3 (467-610)||(55467624-55467767)
chr3 (455-653)||(42363162-42363362)
chr3 (456-610)||(17144707-17144865)
chr3 (471-581)||(54121982-54122092)
chr3 (453-610)||(10481622-10481784)
chr3 (458-610)||(20846418-20846576)
chr3 (452-653)||(2832330-2832539)
chr3 (445-576)||(6004403-6004534)
chr3 (469-715)||(52631997-52632248)
chr3 (468-581)||(8557969-8558082)
chr3 (528-653)||(37045328-37045451)
chr3 (523-610)||(45915191-45915272)
chr3 (466-590)||(51191661-51191785)
chr3 (472-610)||(26758186-26758329)
chr3 (531-695)||(25465821-25465996)
chr3 (452-577)||(26291971-26292096)
chr3 (522-590)||(35402207-35402275)
chr3 (452-573)||(38652008-38652128)
chr3 (529-609)||(50578986-50579065)
chr3 (452-600)||(27054017-27054165)
chr3 (452-572)||(40483865-40483985)
chr3 (470-610)||(45629153-45629293)
chr3 (522-581)||(44650976-44651035)
chr3 (467-610)||(2566312-2566455)
chr3 (529-610)||(4554705-4554791)
chr3 (524-581)||(33360968-33361025)
chr3 (522-581)||(4669658-4669717)
chr3 (647-694)||(26758371-26758418)
chr3 (647-706)||(45629336-45629395)
chr3 (526-576)||(4280296-4280346)
chr3 (566-653)||(5681441-5681526)
chr3 (522-576)||(51149673-51149727)
chr3 (650-695)||(2566224-2566269)
chr3 (451-581)||(10369153-10369283)
chr3 (454-576)||(21586859-21586981)
chr3 (647-692)||(22257391-22257436)
chr3 (474-576)||(22257515-22257617)
chr3 (527-572)||(55129746-55129791)
chr3 (522-594)||(38680818-38680890)
chr3 (452-581)||(43030359-43030488)
chr3 (647-694)||(25919145-25919192)
chr3 (647-706)||(45915087-45915146)
chr3 (533-576)||(46253448-46253491)
chr3 (619-653)||(5640669-5640703)
chr3 (619-653)||(5671944-5671978)
chr3 (522-576)||(34794607-34794661)
chr3 (648-686)||(38680955-38680993)
chr3 (529-599)||(45699636-45699706)
chr3 (657-706)||(4280437-4280486)
[»] chr1 (64 HSPs)
chr1 (452-652)||(36203378-36203583)
chr1 (473-696)||(32910255-32910488)
chr1 (452-610)||(40095398-40095561)
chr1 (444-610)||(12973494-12973665)
chr1 (452-589)||(50471169-50471306)
chr1 (452-715)||(17651694-17651968)
chr1 (452-610)||(25559977-25560136)
chr1 (452-581)||(21685553-21685682)
chr1 (457-600)||(9962139-9962282)
chr1 (452-610)||(16529477-16529640)
chr1 (452-571)||(35980408-35980527)
chr1 (455-576)||(27507507-27507628)
chr1 (467-696)||(17989005-17989248)
chr1 (471-576)||(2490044-2490149)
chr1 (452-581)||(11074410-11074538)
chr1 (451-581)||(8165562-8165692)
chr1 (452-582)||(39256646-39256776)
chr1 (452-558)||(52380756-52380862)
chr1 (552-653)||(35992541-35992641)
chr1 (451-556)||(51252451-51252556)
chr1 (472-576)||(16537853-16537957)
chr1 (647-706)||(40095292-40095351)
chr1 (477-577)||(50153376-50153476)
chr1 (452-610)||(26345035-26345198)
chr1 (522-607)||(39158303-39158393)
chr1 (470-576)||(52828783-52828888)
chr1 (455-576)||(1161758-1161879)
chr1 (471-576)||(34914095-34914200)
chr1 (522-581)||(8211291-8211350)
chr1 (522-581)||(20493761-20493820)
chr1 (647-706)||(26344929-26344988)
chr1 (522-581)||(32954050-32954109)
chr1 (473-653)||(35980218-35980387)
chr1 (473-600)||(18309963-18310090)
chr1 (467-558)||(44055670-44055761)
chr1 (454-572)||(3935401-3935519)
chr1 (467-685)||(10847429-10847647)
chr1 (522-590)||(45691810-45691878)
chr1 (469-606)||(47984487-47984623)
chr1 (522-581)||(5155354-5155413)
chr1 (453-555)||(8268600-8268703)
chr1 (531-581)||(24629964-24630014)
chr1 (452-514)||(25532714-25532776)
chr1 (449-556)||(33910818-33910925)
chr1 (467-582)||(44918505-44918615)
chr1 (452-513)||(6248019-6248080)
chr1 (471-581)||(35375137-35375247)
chr1 (620-652)||(9330490-9330522)
chr1 (647-683)||(15882053-15882089)
chr1 (647-695)||(34914274-34914322)
chr1 (527-575)||(50952047-50952095)
chr1 (647-706)||(3935602-3935661)
chr1 (647-686)||(6694269-6694308)
chr1 (531-578)||(11899027-11899074)
chr1 (527-590)||(16062880-16062943)
chr1 (523-590)||(33769891-33769958)
chr1 (619-653)||(23475048-23475082)
chr1 (657-695)||(25532870-25532908)
chr1 (523-581)||(27350672-27350730)
chr1 (668-706)||(47984365-47984403)
chr1 (527-560)||(9330404-9330437)
chr1 (648-685)||(15880048-15880085)
chr1 (565-610)||(39185512-39185557)
chr1 (566-603)||(44055785-44055822)
[»] scaffold0204 (3 HSPs)
scaffold0204 (471-653)||(25825-26005)
scaffold0204 (467-653)||(14480-14663)
scaffold0204 (677-706)||(26050-26079)
[»] chr6 (40 HSPs)
chr6 (453-576)||(24644969-24645091)
chr6 (452-576)||(9686000-9686124)
chr6 (451-653)||(892276-892482)
chr6 (482-646)||(30752503-30752671)
chr6 (528-653)||(4562875-4562998)
chr6 (452-573)||(6266846-6266967)
chr6 (452-556)||(10590793-10590897)
chr6 (522-608)||(12108548-12108634)
chr6 (469-576)||(14940588-14940695)
chr6 (472-610)||(32190647-32190790)
chr6 (449-556)||(35040246-35040353)
chr6 (523-610)||(7170074-7170166)
chr6 (456-600)||(13859375-13859519)
chr6 (451-563)||(22413779-22413891)
chr6 (455-600)||(31945421-31945561)
chr6 (522-581)||(5874163-5874222)
chr6 (647-706)||(24644835-24644894)
chr6 (452-576)||(29048069-29048193)
chr6 (452-514)||(8135378-8135440)
chr6 (523-581)||(11417069-11417127)
chr6 (647-705)||(11417212-11417270)
chr6 (523-577)||(19135127-19135181)
chr6 (107-200)||(10329614-10329707)
chr6 (451-581)||(13810880-13811010)
chr6 (647-695)||(9686193-9686241)
chr6 (456-556)||(5287940-5288040)
chr6 (647-706)||(7169963-7170022)
chr6 (648-686)||(7676247-7676285)
chr6 (522-576)||(12270569-12270623)
chr6 (452-555)||(15859668-15859771)
chr6 (452-578)||(10494395-10494521)
chr6 (522-583)||(25136784-25136845)
chr6 (648-684)||(12108461-12108497)
chr6 (526-581)||(13801993-13802048)
chr6 (452-514)||(20500507-20500569)
chr6 (563-608)||(13532263-13532308)
chr6 (528-581)||(15859266-15859319)
chr6 (659-692)||(16971638-16971671)
chr6 (647-692)||(29048267-29048312)
chr6 (528-581)||(33550338-33550391)
[»] scaffold0059 (1 HSPs)
scaffold0059 (448-581)||(69551-69684)
[»] scaffold0013 (2 HSPs)
scaffold0013 (448-581)||(105968-106101)
scaffold0013 (448-581)||(128575-128708)
[»] scaffold0470 (1 HSPs)
scaffold0470 (527-653)||(6258-6387)
[»] scaffold0015 (1 HSPs)
scaffold0015 (523-581)||(62413-62471)
[»] scaffold0688 (2 HSPs)
scaffold0688 (458-514)||(1107-1163)
scaffold0688 (458-514)||(7676-7732)
[»] scaffold0029 (1 HSPs)
scaffold0029 (527-590)||(40577-40640)
[»] scaffold0308 (1 HSPs)
scaffold0308 (452-576)||(5899-6023)
[»] scaffold0664 (1 HSPs)
scaffold0664 (563-600)||(6054-6091)


Alignment Details
Target: chr7 (Bit Score: 547; Significance: 0; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 8 - 715
Target Start/End: Complemental strand, 32942663 - 32941952
Alignment:
Q  8 aatatttctttcctttaagtacaatcttttttatgtatggatcctctccctggggtacttgtggagcnnnnnnngcttgctctcttgagactgcatatac 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||||| ||||||||||||||||||||    
T  32942663 aatatttctttcctttaagtacaatcttttttatgtatggatcctctccctgaggtacttgtggagctttttttgcttgttctcttgagactgcatatac 32942564  T
Q  108 catttgaactgatccacctccaagatcagctactgccactgtctctgaaaaatcttttcccaagtttcccaaaacatagttaattgtcacctacacaaat 207  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32942563 catttgaactgatccccctccaagatcagctactgccactgtctctgaaaaatcttttcccaagtttcccaaaacatagttaattgtcacctacacaaat 32942464  T
Q  208 gttgcaaggttaggatagcacttttcaaattgtttccactactctatcaaaaataaaataaaatggtttcgctgcaacaattttatcgtgtagcaggggt 307  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32942463 gttgcaaggttaggaaagcacttttcaaattgtttccactactctatcaaaaataaaataaaatggtttcgctgcaacaattttatcatgtagcaggggt 32942364  T
Q  308 tttcgcagtgtgttttgtatcggttattattgacagatattattgaaaattttcgagggtattgtatttatagtaagtttcaacatttaatgtgaagaat 407  Q
    ||| || ||||| ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  32942363 ttttgcggtgtgatttgtatcggttattattgacagatattattgaaatttttttagggtattgtatttatagtaagtttcaacatttaatgtgaagaat 32942264  T
Q  408 aaattcacatcttcgacatcgtgctaaaatcactaccttttacctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaact 507  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||    
T  32942263 aaattcacatcttggacgtcgtgctaaaatcactaccttttacctaggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaact 32942164  T
Q  508 gcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgat 602  Q
    |||||||       |||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||    
T  32942163 gcaagataaaaaaacatgcggtttggtttgattcggttgacttttaaaatacaatccgaaccaaaccaaaccaaaccaatgtggtttgagttggatcgat 32942064  T
Q  603 tggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacat 702  Q
    ||||||||        |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32942063 tggtgcggttttttttcgagacaatacaattttttgtttccaacattaaaaaggtaaaacacaa-atattttcaacaatgtttttaatttcattccacat 32941965  T
Q  703 tacattctcattt 715  Q
    |||||||||||||    
T  32941964 tacattctcattt 32941952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 522 - 686
Target Start/End: Original strand, 46147228 - 46147393
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncga 621  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||  |||||||||||||||||| |||||  ||||||||| ||||||| |        |||    
T  46147228 catgcggattggtttggtttggttgacttttaaaataaaatctgaaccaaaccaaaccaatgcggtttacgttggatcggttggtgc-gatttttttcga 46147326  T
Q  622 gacaatacaattttttgtttccaacattaaaa--aggtaaaacacaacatattttcaacaatgtttt 686  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||| ||||| ||||| |||||||||    
T  46147327 gacaatacaattttttgtttccatcattaaaatcaggtaaaacacgacataatttcagcaatgtttt 46147393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 32948782 - 32948687
Alignment:
Q  8 aatatttctttcctttaagtacaatcttttttatgtatggatcctctccctggggtacttgtggagcnnnnnnngcttgctctcttgagactgcat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||    
T  32948782 aatatttctttcctttaagtacaatcttttttatgtatggatcctctccctgaggtacttgtggagctttttttgcttgctctcttgagactgcat 32948687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 590
Target Start/End: Original strand, 13852250 - 13852389
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||| ||| || ||||||||||| |||||||  |||||||||||| |||||| ||||       |||||||||||||||||||||||||| ||    
T  13852250 ctaggggtgtttgcagtgtggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgattt 13852349  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||    ||||||||||||||||||||||| ||||||    
T  13852350 ttaaaaagtcatccaaaccaaaccaaaccaatgcggtttg 13852389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 8568689 - 8568582
Alignment:
Q  457 gtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaa 556  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||        ||||||||||||| ||||||||||||||||||||    
T  8568689 gtgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggttcggttcggttgacttttaaaa 8568590  T
Q  557 tacaatcc 564  Q
    || |||||    
T  8568589 taaaatcc 8568582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 715
Target Start/End: Complemental strand, 29211788 - 29211512
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||| ||||||||| |||| ||| ||||| |||| |||||||||||||       | ||| ||||||||| ||||||| || |||    
T  29211788 taggggtgttcgcggtgcgatttggttcggttttaaggctaaaactcattcgaactgcaagataaaaaa-cttgcagtttggtttcgttcggtcgatttt 29211690  T
Q  552 taaaatacaatcc-----aaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaac 646  Q
    | |||||||||||     |||||||||||||||||||  | ||||||||||||| |||||||||        ||| ||||||||||||||||||| ||||    
T  29211689 tgaaatacaatccgaaccaaaccaaaccaaaccaatgcaggttgagttggatcggttggtgcggtttttt--cgaaacaatacaattttttgtttgcaac 29211592  T
Q  647 attaaaa-----------aggtaaaacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    |||||||           | ||||||||||| ||||||  | |||||||||||||||||||||| |||||||| ||||||    
T  29211591 attaaaatatagttaaaaaagtaaaacacaatatatttcgagcaatgtttttaatttcattccaaattacattttcattt 29211512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 475 - 608
Target Start/End: Original strand, 48642745 - 48642883
Alignment:
Q  475 ggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaat-----ccaaacc 569  Q
    |||||| |||||||| ||||| ||||| |||| |||||||       |||||||||||||||||||||||||||||| |||||  |||     |||||||    
T  48642745 ggttcggttttgagggtaaaattcatctgaaccgcaagattaaaaaacatgcggtttggtttggttcggttgactttaaaaattaaatttgaaccaaacc 48642844  T
Q  570 aaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  48642845 aaaccaaaccaatgcggtttgggttggatcgattggtgc 48642883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 653
Target Start/End: Original strand, 29628050 - 29628244
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||||||| ||||||||| |||||  |||||||| ||||| |       ||||||||||| |||||||||| ||| |||    
T  29628050 taggggtgttcgcggtgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaacatgcggtttgatttggttcggctgaattt 29628149  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaa 651  Q
    ||||||| |||   || ||||||||     ||||||||| ||||||||| ||||||||         |||||||||||||||||||||||||||||||||    
T  29628150 taaaataaaatttgaatcaaaccaa-----tgtggtttgggttggatcggttggtgcg--attttttcgagacaatacaattttttgtttccaacattaa 29628242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 528 - 653
Target Start/End: Original strand, 43202447 - 43202573
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg--nnnnnnnncgagaca 625  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||| | | ||||| |||||| ||          |||||||    
T  43202447 gtttggtttggttcggttgacttttaaaatacaatctgaatcaaaccaaaccaatgtggtttg-gattgatcggttggtgtggttttttttttcgagaca 43202545  T
Q  626 atacaattttttgtttccaacattaaaa 653  Q
    ||||||||||||||||||||||||||||    
T  43202546 atacaattttttgtttccaacattaaaa 43202573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 527 - 695
Target Start/End: Original strand, 37375341 - 37375518
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaa 626  Q
    |||||||||||||| |||||||||| |||||| ||||| |||||||| ||||||||| |||||| |||| |||| |||||||||        ||| || |    
T  37375341 ggtttggtttggtttggttgactttaaaaatagaatccgaaccaaactaaaccaatgcggtttgggttgaatcggttggtgcgg--ttttttcgatacga 37375438  T
Q  627 tacaattttttgtttccaacattaaa---aaggta--------aaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||||||||||||||||||||   ||| ||        |||||||||||||||||||||||||||| ||||||||    
T  37375439 tacaattttttgtttccaacattaaaatcaagttaaaaattttaaacacaacatattttcaacaatgttttaaatttcat 37375518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 455 - 610
Target Start/End: Original strand, 40848796 - 40848956
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||||||  |||||||||||||| |||||||| |||||||||| |||| || ||| |       ||| |||||||||||||||||||||||||||||    
T  40848796 gggtgttcgcggtgcggtttggttcggttttgagggtaaaagtcattcgaattgtaaggtaaaaaaacatacggtttggtttggttcggttgacttttaa 40848895  T
Q  555 aatacaatccaaacc-----aaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||| ||||| ||||     ||||||||| |||| |||||| |||| |||| |||||||||    
T  40848896 aataaaatccgaaccaaataaaaccaaactaatgcggtttgggttgaatcggttggtgcgg 40848956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 23729347 - 23729486
Alignment:
Q  469 cggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaac 568  Q
    ||||||||||| ||||||| | ||||| |||||||||| |||||||       |||||||||||||||   ||||||||||||||||||| ||||  |||    
T  23729347 cggtttggttcaattttgatgctaaaaatcatccgaaccgcaagataaaaaagcatgcggtttggtttaactcggttgacttttaaaataaaatctgaac 23729446  T
Q  569 caaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    |||||||||| |||  ||||||  |||||||| |||||||    
T  23729447 caaaccaaactaatacggtttggtttggatcggttggtgc 23729486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 454 - 653
Target Start/End: Complemental strand, 26525079 - 26524881
Alignment:
Q  454 ggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttta 553  Q
    ||||||||||| || | |||||||||| |||||||  |||||||||| |||||  ||  ||       |||||||||||| ||||||||||| |||||||    
T  26525079 ggggtgttcgcgatccagtttggttcggttttgagactaaaagtcattcgaacaacatcataaaaaaacatgcggtttgggttggttcggttaactttta 26524980  T
Q  554 aaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||| ||||  || |||||| |||||||| |||| | ||||||||| |||||||||        | ||||||| ||||||| |||||||||||||||||    
T  26524979 aaataaaatcataatcaaacctaaccaatgcggttagggttggatcggttggtgcggtgtttcacc-agacaatgcaattttctgtttccaacattaaaa 26524881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 456 - 578
Target Start/End: Complemental strand, 6880241 - 6880120
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||||||  |||||||| ||||||||| |||||||||| | |||||||| |||||||       |||| |||||||| |||| || ||||||||||||    
T  6880241 ggtgttcgcggtgcggtttagttcgattt-gaggttaaaaattatccgaacggcaagataagcaaacatggggtttggtatggtacgattgacttttaaa 6880143  T
Q  556 atacaatccaaaccaaaccaaac 578  Q
    ||| |||||||||||||||||||    
T  6880142 ataaaatccaaaccaaaccaaac 6880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 598
Target Start/End: Original strand, 20306629 - 20306699
Alignment:
Q  524 tgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggat 598  Q
    |||||||||||||||||    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  20306629 tgcggtttggtttggtt----tgacttttaaaataaaatccgaaccaaaccaaaccaatgtggtttgagttggat 20306699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 32948576 - 32948466
Alignment:
Q  163 tttcccaagtttcccaaaacatagttaattgtcacctacac--aaatgttgcaaggttaggatagcacttttcaaattgtttccactac--tctatcaaa 258  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||  || ||||||||| || | ||||  |||||||||    
T  32948576 tttcccaagtttcccaaaacatagttaattgtcacctacacatatatgttgcaaggttaggaaagtgctcttcaaattggtttccctactttctatcaaa 32948477  T
Q  259 aataaaataaaa 270  Q
    || |||||||||    
T  32948476 aa-aaaataaaa 32948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 32900926 - 32900826
Alignment:
Q  100 gcatataccatttgaactgatccacctccaagatcagctactgccactgtctctgaaaaatcttttcccaagtttcccaaaacatagttaattgtcacct 199  Q
    |||||| |||||||||| |||||||||||||||||| ||||  | || |||| |||| ||||||||||||||||||| || | |||||||||||| ||||    
T  32900926 gcatatgccatttgaacagatccacctccaagatcaactaccccaacggtctttgaataatcttttcccaagtttcctaatagatagttaattgtaacct 32900827  T
Q  200 a 200  Q
    |    
T  32900826 a 32900826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 35820156 - 35820098
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  35820156 atgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaaaccaa 35820098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 525007 - 524882
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||||||||||| |  ||| |||||||||  |||| ||| ||||||| ||| |||| |||||||        ||||||||||||||| |||| |||||||    
T  525007 ctaggggtgttcacggtgcagtttggttcatttttaaggctaaaagttatctgaaccgcaagataaaaaaatatgcggtttggtttgattcgattgactt 524908  T
Q  551 ttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||| |||||||||||||||||    
T  524907 ttaaaataaaatccaaaccaaaccaa 524882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 589
Target Start/End: Complemental strand, 26215249 - 26215123
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaat---- 562  Q
    |||||||||||| | ||||||||||||||||||||| ||| |||||||       ||| ||| || |||||||||||||||||||||||||| |||        
T  26215249 tgcggtttggtttggttttgaggttaaaagtcatccaaaccgcaagataataaagcatacgggtttgtttggttcggttgacttttaaaataaaatcgaa 26215150  T
Q  563 ccaaaccaaaccaaaccaatgtggttt 589  Q
    |||| ||||  ||||||||||||||||    
T  26215149 ccaagccaactcaaaccaatgtggttt 26215123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 27054873 - 27054748
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||| ||  |||||||||||| | |||||||   ||||||||||| ||| || ||||       |||||||||||||||||||||||||| ||    
T  27054873 ctaggggtgtttgcggtgcggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgattt 27054774  T
Q  551 ttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||  | ||||||||||||||||    
T  27054773 ttaaaaagccatccaaaccaaaccaa 27054748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 7209409 - 7209285
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||| |||||||||||||| ||||||   |||||||||||| |||  | ||||       ||| |||||||||||||||||||||| |||    
T  7209409 taggggtgttcgcagtgcggtttggttcggttttgaatataaaagtcatccaaaccacgagataaaaaagcatacggtttggtttggttcggttgatttt 7209310  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    |||||    ||||||||||||||||    
T  7209309 taaaaagtcatccaaaccaaaccaa 7209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 576
Target Start/End: Complemental strand, 16535879 - 16535759
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||||||  ||| |||| |||||||||||||| |||||||||| | ||| ||||| |       ||||||||||  || |||||||||||||||||||    
T  16535879 ggtgttcgcggtgcagtttagttcgattttgaggctaaaagtcatgcaaaccgcaagttaaaaaaacatgcggtttcattaggttcggttgacttttaaa 16535780  T
Q  556 atacaatccaaaccaaaccaa 576  Q
    ||| ||||| |||||||||||    
T  16535779 ataaaatccgaaccaaaccaa 16535759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 16629783 - 16629903
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||||||  ||| |||| |||||||||||||| |||||||||| | ||| ||||| |       ||||||||||  || |||||||||||||||||||    
T  16629783 ggtgttcgcggtgcagtttagttcgattttgaggctaaaagtcatgcaaaccgcaagttaaaaaaacatgcggtttcattaggttcggttgacttttaaa 16629882  T
Q  556 atacaatccaaaccaaaccaa 576  Q
    ||| ||||| |||||||||||    
T  16629883 ataaaatccgaaccaaaccaa 16629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 651 - 706
Target Start/End: Original strand, 27456498 - 27456553
Alignment:
Q  651 aaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  27456498 aaaaggtaaaacacaacatatttccgacaatgtttttagtttcattccacattaca 27456553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 583
Target Start/End: Original strand, 34750929 - 34751061
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||||||||||| | ||||||||||||||  |||| ||| |||||||||| ||||  |||| ||        |||||| ||||||||||| |||||| ||    
T  34750929 ctaggggtgttcacgatgcggtttggttcagtttttaggctaaaagtcattcgaatcgcaatatataaaagtatgcgggttggtttggtttggttgattt 34751028  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    |||||||| ||||| || |||||||||||||||    
T  34751029 ttaaaataaaatccgaatcaaaccaaaccaatg 34751061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 600
Target Start/End: Original strand, 23032631 - 23032769
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaat---- 562  Q
    |||||||||||||  | |||||| ||||||||||| |||| | |||||        ||| ||||| |||||||||||||||||||||||||| |||        
T  23032631 tgcggtttggttcagtgttgaggctaaaagtcatctgaaccgaaagataaaaaagtatgtggtttagtttggttcggttgacttttaaaataaaatttga 23032730  T
Q  563 -ccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
     ||||||||||||||||||||| ||||||  ||||||||    
T  23032731 accaaaccaaaccaaaccaatgaggtttggattggatcg 23032769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 590
Target Start/End: Original strand, 12117612 - 12117680
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||| |||||||||||||||||||| ||||||||    ||||||||||||||||||||||| ||||||    
T  12117612 catgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaatgcggtttg 12117680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 32923914 - 32923806
Alignment:
Q  92 ttgagactgcatataccatttgaactgatccacctccaagatcagctactgccactgtctctgaaaaatcttttcccaagtttcccaaaacatagttaat 191  Q
    |||| ||||||||| ||||||||||||||||||||||||||||   |||| ||||||| | ||  || | ||||||||| || |||||  |||||||||     
T  32923914 ttgacactgcatatgccatttgaactgatccacctccaagatccattactcccactgtttttgtgaatttttttcccaatttccccaatgcatagttaac 32923815  T
Q  192 tgtcaccta 200  Q
    |||||||||    
T  32923814 tgtcaccta 32923806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 10671833 - 10671892
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  10671833 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 10671892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 647 - 706
Target Start/End: Complemental strand, 11834404 - 11834345
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| || | ||||||||    
T  11834404 attaaaaagctaaaacacaacatattttcaacaatgttttaaattttatccaacattaca 11834345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 577
Target Start/End: Complemental strand, 31287898 - 31287794
Alignment:
Q  473 ttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaa 572  Q
    |||||| |||||||||| ||| ||||||| |||| | |||||        ||||||||||||||||||||||||||||||||||||  |||| ||||||     
T  31287898 ttggtttgattttgaggctaatagtcatctgaaccgtaagataaataagtatgcggtttggtttggttcggttgacttttaaaataagatccgaaccaat 31287799  T
Q  573 ccaaa 577  Q
    |||||    
T  31287798 ccaaa 31287794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 47069681 - 47069740
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  47069681 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 47069740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 47204527 - 47204468
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  47204527 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 47204468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 576
Target Start/End: Complemental strand, 8118403 - 8118296
Alignment:
Q  469 cggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaac 568  Q
    |||||||||||  |||||||| ||||| | |||||||| |||||||       |||| ||||||||||||||||||||| ||| |||||| ||||  |||    
T  8118403 cggtttggttctgttttgagggtaaaatttatccgaaccgcaagataaaaaagcatgtggtttggtttggttcggttgattttaaaaataaaatctgaac 8118304  T
Q  569 caaaccaa 576  Q
    ||||||||    
T  8118303 caaaccaa 8118296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 610
Target Start/End: Complemental strand, 47646782 - 47646697
Alignment:
Q  530 ttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||||||||||||||| |||||||||| | |     ||||||||||||||| ||| |||||||| ||||||||| |||||||||    
T  47646782 ttggtttggttcggttgatttttaaaataaagtttgaaccaaaccaaaccaaatcaacgtggtttgtgttggatcggttggtgcgg 47646697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 608
Target Start/End: Original strand, 7697247 - 7697387
Alignment:
Q  472 tttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatc-----caa 566  Q
    ||||||||| |||||||||||||||||   |||||||||||||        ||| |||| |||||||||| ||||| |||||||||| ||||     |||    
T  7697247 tttggttcggttttgaggttaaaagtccgtcgaactgcaagatacaaaagtatgtggtt-ggtttggttctgttgaattttaaaataaaatccggatcaa 7697345  T
Q  567 accaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    ||||||||||||||||| ||||||  || ||||| |||||||    
T  7697346 accaaaccaaaccaatgcggtttggatttgatcggttggtgc 7697387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 590
Target Start/End: Complemental strand, 8769033 - 8768965
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||| |||| |||| ||||||    
T  8769033 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaacgaaactaatgcggtttg 8768965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 575
Target Start/End: Original strand, 20334597 - 20334649
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaacca 575  Q
    ||||||||||||||||||||||||||||| |||||| ||||  ||||||||||    
T  20334597 atgcggtttggtttggttcggttgactttaaaaataaaatctgaaccaaacca 20334649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 576
Target Start/End: Original strand, 47903205 - 47903314
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||||||||||||| |||| ||  ||||| |||||| ||| || ||||       |||||||||||||||||||||||||| ||||||||    ||||||    
T  47903205 tgcggtttggttcggttttaagcataaaaatcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaaagtcatccaa 47903304  T
Q  567 accaaaccaa 576  Q
    ||||||||||    
T  47903305 accaaaccaa 47903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 3213292 - 3213233
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    ||||||| |||||||||||||    
T  3213292 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaatcaaaccaaaccaa 3213233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 657 - 704
Target Start/End: Complemental strand, 6880026 - 6879979
Alignment:
Q  657 taaaacacaacatattttcaacaatgtttttaatttcattccacatta 704  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||    
T  6880026 taaaacacaacatattttcaacaatgttttaaatttcatccaacatta 6879979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 648 - 695
Target Start/End: Complemental strand, 22701251 - 22701204
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  22701251 ttaaaaagataaaacataacatattttcaacaatgttttcaatttcat 22701204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 11206428 - 11206374
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  11206428 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 11206374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 32911914 - 32911872
Alignment:
Q  92 ttgagactgcatataccatttgaactgatccacctccaagatc 134  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  32911914 ttgacactgcatatgccatttgaactgatccacctccaagatc 32911872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 10338950 - 10338793
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||| |||||||| | |||||||| |||| ||||||| |||||||| ||        ||  |||||  ||||||||| ||||||||    
T  10338950 taggggtgttcgcggtgcagtttggtttggttttgagggtaaa-gtcatccaaactgcaaaataaataagtatttggttttatttggttcgattgacttt 10338852  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||| ||||  |||||||||||| ||||  ||||||  |||||||| ||| |||||    
T  10338851 taaaataaaatctgaaccaaaccaaatcaattcggtttggattggatcggttgatgcgg 10338793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 694
Target Start/End: Original strand, 25007474 - 25007519
Alignment:
Q  649 taaaaaggtaaaacacaacatattttcaacaatgtttttaatttca 694  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||    
T  25007474 taaaaagttaaaacaaaacatattttcaacaatgttttgaatttca 25007519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 653
Target Start/End: Complemental strand, 2308180 - 2308046
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaacc---aatgtggtttgagttggatcgattggtgcggnnnnnnnn 618  Q
    ||||||||||||||||||||| |||||||||| |||     ||| |||||| ||||||   ||||||||||||||||||||| || || | |            
T  2308180 ggtttggtttggttcggttgatttttaaaataaaatttgaaccacaccaaatcaaaccaataatgtggtttgagttggatcggttagttcagtttttttt 2308081  T
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    | | ||||||||||||||||||| |||||||||||    
T  2308080 caaaacaatacaattttttgtttgcaacattaaaa 2308046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 590
Target Start/End: Original strand, 32237665 - 32237729
Alignment:
Q  527 ggtttggtttggttcggttgactttt-aaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||| |||||||||||||||| |||||| ||| | |||||||| ||||||||| ||||||    
T  32237665 ggtttggttcggttcggttgacttttaaaaataaaattcgaaccaaactaaaccaatgcggtttg 32237729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 581
Target Start/End: Original strand, 43429191 - 43429247
Alignment:
Q  525 gcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||||||||||||||||| ||||||||    |||||||| ||||||||||||    
T  43429191 gcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaaccaaaccaa 43429247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 706
Target Start/End: Original strand, 1812627 - 1812682
Alignment:
Q  651 aaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||| ||||||||||||||||||||||| ||||||  ||||||| | ||||||||    
T  1812627 aaaagttaaaacacaacatattttcaacagtgttttagatttcatccaacattaca 1812682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 706
Target Start/End: Original strand, 7697431 - 7697490
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||| |||| |||||||||||||||||||| ||||||| | |||||||| | ||||||||    
T  7697431 attataaagataaaacacaacatattttcagcaatgttataaatttcatccaacattaca 7697490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 695
Target Start/End: Complemental strand, 10338746 - 10338699
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    |||||||| || |||||||||||||| |||||||||||| ||||||||    
T  10338746 ttaaaaagctataacacaacatatttccaacaatgttttcaatttcat 10338699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 715
Target Start/End: Original strand, 11399064 - 11399349
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggttt--ggtttggttcggttgactttta 553  Q
    ||||||||| |||| |||||||||| |||||||| ||||| |||||||||| |||||||       ||||||||||  |||||||||| ||| | |||||    
T  11399064 ggtgttcgcgatgctgtttggttcgcttttgaggctaaaattcatccgaaccgcaagataaaaaa-catgcggtttttggtttggttcagttaaatttta 11399162  T
Q  554 aaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacat 648  Q
    ||  ||||||     ||||| ||||||||| |||| |||||| ||||||||| |||||||||         ||||||| |||||||||| ||| ||| ||    
T  11399163 aagcacaatctgaaccaaactaaaccaaacaaatgcggtttgggttggatcggttggtgcggttttttt--gagacaacacaattttttattttcaaaat 11399260  T
Q  649 ta-----------aaaaggtaaaacacaacatattttca-----------acaatgtttttaatttcattccacattacattctcattt 715  Q
    ||           |||||||||||||||||||||||| |           |||||||||| ||||||||||||||||||||| ||||||    
T  11399261 tataatcgagttaaaaaggtaaaacacaacatattttgagcaaggttccgacaatgttttaaatttcattccacattacattttcattt 11399349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 706
Target Start/End: Original strand, 22298679 - 22298734
Alignment:
Q  652 aaaggtaaaacacaacatattttcaa-caatgtttttaatttcattccacattaca 706  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  22298679 aaagctaaaacacaacatattttcaagcaatgttttaaatttcatccaacattaca 22298734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 588
Target Start/End: Original strand, 27456372 - 27456443
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaac-----caaaccaaaccaatgtggtt 588  Q
    ||||||||||||||| |||| |||||||||||||||| ||| |||||     ||||||||||||||| ||||    
T  27456372 catgcggtttggtttagttctgttgacttttaaaataaaattcaaactgatccaaaccaaaccaatgcggtt 27456443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 33434124 - 33434183
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||  ||||| |||||||||  ||| | ||||||||||||||||    
T  33434124 catgcggtttggtttggttttgttgatttttaaaattaaattcgaaccaaaccaaaccaa 33434183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 41459319 - 41459386
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    |||||| | |||| |||||||||||| ||||||| |||||||||||||  ||||||||| | ||||||    
T  41459319 ttaaaaggctaaagcacaacatatttccaacaatatttttaatttcatctcacattacaatttcattt 41459386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 648 - 686
Target Start/End: Original strand, 20306750 - 20306788
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttt 686  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  20306750 ttaaaaagtaaaaacacaacatattttcaacaatgtttt 20306788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 647 - 685
Target Start/End: Complemental strand, 26215042 - 26215004
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgttt 685  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  26215042 attaaaaaggtaaaacacaacatatttccatcaatgttt 26215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 653
Target Start/End: Complemental strand, 27215165 - 27215135
Alignment:
Q  623 acaatacaattttttgtttccaacattaaaa 653  Q
    |||||||||||||||||||||||||||||||    
T  27215165 acaatacaattttttgtttccaacattaaaa 27215135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 596
Target Start/End: Complemental strand, 36875409 - 36875335
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttgg 596  Q
    |||||| ||| |||||||| | ||| ||||||||||| ||  ||||||||||||||| |||| ||||| ||||||    
T  36875409 catgcgtttttgtttggtttgattgccttttaaaataaaaatcaaaccaaaccaaacaaatgaggtttaagttgg 36875335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 40849044 - 40849082
Alignment:
Q  677 acaatgtttttaatttcattccacattacattctcattt 715  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  40849044 acaatgtttttaatttcattccacattacactttcattt 40849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 685
Target Start/End: Original strand, 2734481 - 2734518
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgttt 685  Q
    |||||| | |||||||||||||||||||||||||||||    
T  2734481 ttaaaatgataaaacacaacatattttcaacaatgttt 2734518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 467 - 573
Target Start/End: Original strand, 5932653 - 5932759
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    ||||||||| |||| |||||||  ||||||||||| |||| || ||||       |||||||||||||||||||  ||||| ||||||||    ||||||    
T  5932653 tgcggtttgattcggttttgagcataaaagtcatctgaaccgcgagataagaaagcatgcggtttggtttggttaagttgatttttaaaaagtcatccaa 5932752  T
Q  567 accaaac 573  Q
    |||||||    
T  5932753 accaaac 5932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 25007348 - 25007397
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||||||| |||| || ||||||||| || |||||||||||||||||    
T  25007348 ggtttggtttgattcgattaacttttaaactaaaatccaaaccaaaccaa 25007397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 6e-45; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 653
Target Start/End: Complemental strand, 27572185 - 27571981
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  |||||||||||||| ||||||||||||||||||||||||| ||||| |       ||||||||||||||||||||||||| ||||    
T  27572185 taggggtgtttgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttt 27572086  T
Q  552 taaaatacaatcc-----aaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaac 646  Q
    ||||||| |||||     ||||||||||||||||||| |||||| ||||||||| |||||||||        ||||||||||||||||||||||||||||    
T  27572085 taaaataaaatccgaaccaaaccaaaccaaaccaatgcggtttgggttggatcggttggtgcgg--ttttttcgagacaatacaattttttgtttccaac 27571988  T
Q  647 attaaaa 653  Q
    |||||||    
T  27571987 attaaaa 27571981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 20192119 - 20191961
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||  | || ||||| ||||| |||||| ||||||||||||| ||||||||||||       |||| | |||| ||||||||||||||||||    
T  20192119 taggggtgttctaagtgaggtttagttcggttttgatgttaaaagtcatctgaactgcaagattaaaaaacatgtgatttgatttggttcggttgacttt 20192020  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||| ||||| ||| ||| |||||||||| ||||||| |||||||| || ||||||    
T  20192019 taaaataaaatccgaactaaatcaaaccaatgcggtttgaattggatcggtttgtgcgg 20191961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 600
Target Start/End: Original strand, 6633341 - 6633410
Alignment:
Q  531 tggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
    |||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  6633341 tggtttggtttggttgacttttaaaataaaatctgaaccaaaccaaaccaatgtggtttgagttggatcg 6633410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 467 - 581
Target Start/End: Complemental strand, 35240949 - 35240835
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    ||||||||||||||||||||||| ||||| |||||||||| | ||| |        |||||||||| |||||||||||||||||| |||||| ||||| |    
T  35240949 tgcggtttggttcgattttgaggctaaaattcatccgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgactttaaaaataaaatccga 35240850  T
Q  567 accaaaccaaaccaa 581  Q
    |||||||||||||||    
T  35240849 accaaaccaaaccaa 35240835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 452 - 598
Target Start/End: Original strand, 25495027 - 25495178
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||||||  ||| |||| ||        |||| |||||||||  ||||||||| |||    
T  25495027 taggggtgttcgctatgcggtttggttcggttttgaggctaaaagtcatctaaaccgcaacataaataagtatgcagtttggtttttttcggttgatttt 25495126  T
Q  552 taaaatacaatcc-----aaaccaaaccaaaccaatgtggtttgagttggat 598  Q
    ||||||| |||||     |||||||||| |||||||||||||||| ||||||    
T  25495127 taaaataaaatccgaacaaaaccaaacccaaccaatgtggtttgaattggat 25495178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 467 - 572
Target Start/End: Complemental strand, 40331615 - 40331510
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||||||| ||||||||||||| || ||||| ||| ||||||||||||       || | |||||||||||||||||||||||||||||||| ||||| |    
T  40331615 tgcggtttagttcgattttgagatttaaagtaatctgaactgcaagatgaaaaaacacgtggtttggtttggttcggttgacttttaaaataaaatccga 40331516  T
Q  567 accaaa 572  Q
    ||||||    
T  40331515 accaaa 40331510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 452 - 576
Target Start/End: Original strand, 36567664 - 36567788
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||| ||||| || | |||||||||||||||| |||||||| | |||||        ||||||||||||| |||| ||||||||||    
T  36567664 taggggtgttcgcggtgccgtttgatttggttttgaggttaaaagttatccgaaccgtaagatgaataagtatgcggtttggttcggtttggttgacttt 36567763  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    ||||||| ||| |||||||||||||    
T  36567764 taaaataaaattcaaaccaaaccaa 36567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 17132159 - 17132101
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  17132159 atgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaaaccaa 17132101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 706
Target Start/End: Original strand, 36760136 - 36760316
Alignment:
Q  532 ggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcg-gnnnnnnnncgagacaataca 630  Q
    ||||||||||| ||||||||||||||| |||     || |||||||||||||||||||||||||||||| ||||||||           |||||||||||    
T  36760136 ggtttggttcgattgacttttaaaataaaat-----ccgaaccaaaccaatgtggtttgagttggatcggttggtgcgtttttttttttgagacaataca 36760230  T
Q  631 attttttgtttccaa----------cattaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||||||||||||||            |||||||  ||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  36760231 attttttgtttccaaatttaaaatgagttaaaaatttaaaacacaacatattttcaacaaaatttttaatttcattcaacattaca 36760316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 474 - 576
Target Start/End: Original strand, 40884295 - 40884397
Alignment:
Q  474 tggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaac 573  Q
    ||||||||||||||||||||||||||| ||||| |||||||        |||| ||||||||| ||||||| ||||||||||||| |||  |||||||||    
T  40884295 tggttcgattttgaggttaaaagtcattcgaaccgcaagataaaaaagtatgctgtttggtttagttcggtcgacttttaaaataaaatttaaaccaaac 40884394  T
Q  574 caa 576  Q
    |||    
T  40884395 caa 40884397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 22747712 - 22747584
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  | |||||| ||||| |||||||| |||| ||||||||||| |||||||       ||||||||||| ||||||||| ||||||||    
T  22747712 taggggtgttcgcggtacggtttagttcggttttgaggctaaa-gtcatccgaaccgcaagataaaagtacatgcggtttgatttggttcgattgacttt 22747614  T
Q  552 taaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||| |||   ||| ||||||||||||    
T  22747613 taaaataaaatttgaacaaaaccaaaccaa 22747584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 580
Target Start/End: Complemental strand, 1048783 - 1048725
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaacca 580  Q
    |||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||    
T  1048783 catgcggtttggtttggtccgattgacttttgaaataaaatccaaaccaaaccaaacca 1048725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 608
Target Start/End: Original strand, 14652465 - 14652551
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    |||||| |||| |||||||| ||||||||| |||||| ||||  |||||||||||||||||| | |||| ||||||||| |||||||    
T  14652465 catgcgatttgatttggttcagttgactttaaaaataaaatctgaaccaaaccaaaccaatgcgatttgggttggatcggttggtgc 14652551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 607
Target Start/End: Original strand, 18432046 - 18432183
Alignment:
Q  477 ttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnn--catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaacc 574  Q
    |||| |||| |||||||||||||||||||||| |||||         |||| ||||| ||||  |||||||||||||||||||| ||||||||| |||||    
T  18432046 ttcggtttttaggttaaaagtcatccgaactgtaagataaaaaaaaacatggggttttgtttaattcggttgacttttaaaataaaatccaaacaaaacc 18432145  T
Q  575 aaaccaa-----tgtggtttgagttggatcgattggtg 607  Q
    |||||||     | ||||||| ||||||||||||||||    
T  18432146 aaaccaatacactttggtttgggttggatcgattggtg 18432183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 647 - 695
Target Start/End: Original strand, 25495233 - 25495281
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  25495233 attaaaaaggtaaaacacaacatattttcaacaatgttttaaatatcat 25495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 599
Target Start/End: Complemental strand, 28224933 - 28224857
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatc 599  Q
    |||| |||||||||| |||||||   |||||||||| ||||||||||||||||||||| | |||||||| |||||||    
T  28224933 atgcagtttggtttgtttcggttcttttttaaaataaaatccaaaccaaaccaaaccagtatggtttgaattggatc 28224857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 583
Target Start/End: Complemental strand, 32244445 - 32244385
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  32244445 atgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaatcaaacaaatg 32244385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 527 - 610
Target Start/End: Original strand, 41454881 - 41454969
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||| |||||||||||||||||||||| |||     ||||||||||||||||||||| ||||||  |||||||  |||||||||    
T  41454881 ggtttggttcggttcggttgacttttaaaataaaatctgaaccaaaccaaaccaaaccaatgcggtttggattggatctgttggtgcgg 41454969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 590
Target Start/End: Original strand, 9161001 - 9161064
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||||||||||||||| ||||||||    ||||||||||||||||||||||| ||||||    
T  9161001 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaatgcggtttg 9161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 11917418 - 11917477
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  11917418 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 11917477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 581
Target Start/End: Original strand, 15068400 - 15068532
Alignment:
Q  449 acctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgac 548  Q
    ||||||||||||||||  |||||||||||||| |||| ||  ||| | |||||| ||| || |||        |||||| |||||||||||||||||||     
T  15068400 acctaggggtgttcgcggtgcggtttggttcggttttaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgat 15068499  T
Q  549 ttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||    |||||||||||||||||||||    
T  15068500 ttttaaaaagtcatccaaaccaaaccaaaccaa 15068532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 471 - 558
Target Start/End: Original strand, 2588936 - 2589023
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaata 558  Q
    ||||||||||||||||||  ||||||||||  |||| | |||||       ||||||||||||||||||| |||||||||||||||||    
T  2588936 gtttggttcgattttgagactaaaagtcatttgaaccgtaagataaaaaaacatgcggtttggtttggtttggttgacttttaaaata 2589023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 648 - 702
Target Start/End: Original strand, 6633467 - 6633521
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacat 702  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||| |||||    
T  6633467 ttaaaaaggtaaaacacaacatattttcagcaatatttttaattttatttcacat 6633521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 653
Target Start/End: Original strand, 18845545 - 18845655
Alignment:
Q  543 gttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttc 642  Q
    ||||| |||||||||| ||||  ||||||||||||||| || |||||| ||||||||| |||||||          | |||| |||||||||||||||||    
T  18845545 gttgagttttaaaataaaatctgaaccaaaccaaaccactgcggtttgggttggatcggttggtgcattttttttaccagacgatacaattttttgtttc 18845644  T
Q  643 caacattaaaa 653  Q
    |||||||||||    
T  18845645 caacattaaaa 18845655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 693
Target Start/End: Original strand, 33792815 - 33792861
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttc 693  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  33792815 attaaaaaggtaaaacacaacatattttcagcaatgttttaaatttc 33792861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 576
Target Start/End: Complemental strand, 333402 - 333293
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    ||||||||||||||||||||||  |||||||||||| ||| || ||||       ||||||  ||||||||||||| |||| ||||||||    ||||||    
T  333402 tgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagatagaaaagcatgcgaattggtttggttcgattgatttttaaaaagtcatccaa 333303  T
Q  567 accaaaccaa 576  Q
    ||||||||||    
T  333302 accaaaccaa 333293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 35358949 - 35359009
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaat 582  Q
    ||||||||||||||||||||||||||  |||||||    ||||||||||||||||||||||    
T  35358949 catgcggtttggtttggttcggttgatatttaaaaagtcatccaaaccaaaccaaaccaat 35359009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 695
Target Start/End: Original strand, 41455016 - 41455064
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  41455016 attaaaaagctaaaacacaacatattttcatcaatgttttaaatttcat 41455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 36177175 - 36177116
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||| ||||||||||||    
T  36177175 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaaccaaaccaa 36177116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 451 - 583
Target Start/End: Original strand, 38433639 - 38433771
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||||||||||| |  ||| |||| ||||| |||||||  |||||||||| | ||| || ||||       |||||||||| ||||||||||||||| ||    
T  38433639 ctaggggtgttcacggtgcagtttagttcggttttgagcataaaagtcattcaaaccgcgagataaaaaatcatgcggtttagtttggttcggttgattt 38433738  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    ||||||     ||||||||||||||||||||||    
T  38433739 ttaaaaagtcctccaaaccaaaccaaaccaatg 38433771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 8409004 - 8409062
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||||||||||||||||||| ||||||||    | |||||||||||||||||||    
T  8409004 atgcggtttggtttggttcggttgatttttaaaaagtcacccaaaccaaaccaaaccaa 8409062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 27886486 - 27886432
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  27886486 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 27886432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 556
Target Start/End: Complemental strand, 30265930 - 30265827
Alignment:
Q  453 aggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttt 552  Q
    ||||||||||||  |||||||||||| | |||||||  ||||| |||||  ||| |||||||       ||||| |||||||||||||||||||| ||||    
T  30265930 aggggtgttcgcggtgcggtttggtttggttttgagcataaaaatcatctaaaccgcaagataaaaaaacatgcagtttggtttggttcggttgattttt 30265831  T
Q  553 aaaa 556  Q
    ||||    
T  30265830 aaaa 30265827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 681
Target Start/End: Original strand, 18432233 - 18432266
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaat 681  Q
    ||||||||||||||||||||||||||||||||||    
T  18432233 ttaaaaaggtaaaacacaacatattttcaacaat 18432266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 558
Target Start/End: Original strand, 40692453 - 40692543
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaata 558  Q
    |||| |||| |||| |||||||| || ||||||| | |||||||||||       |||||| ||||||||||||||||||||||||||||||    
T  40692453 tgcgatttgattcggttttgaggctagaagtcattcaaactgcaagataaaaag-catgcgatttggtttggttcggttgacttttaaaata 40692543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 581
Target Start/End: Original strand, 6594997 - 6595049
Alignment:
Q  529 tttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||| ||||||||||||||| ||||||  ||||||| |||||||||||||    
T  6594997 tttggttcggttcggttgactttaaaaataacatccaaatcaaaccaaaccaa 6595049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 583
Target Start/End: Complemental strand, 36103680 - 36103620
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    ||||||||||||||||||| ||||| ||||||||    ||||||||||||||||| |||||    
T  36103680 atgcggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaaccaaatcaatg 36103620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 590
Target Start/End: Complemental strand, 2226949 - 2226886
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||||||||||||||| ||||||||    |||||||||||||||| | |||| ||||||    
T  2226949 ggtttggtttggttcggttgatttttaaaaactcatccaaaccaaaccaatctaatgcggtttg 2226886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 10090263 - 10090310
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    |||||||||||||| |||||||| ||||||||||| |||| |||||||    
T  10090263 tgcggtttggttcggttttgaggctaaaagtcatcagaaccgcaagat 10090310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 667680 - 667630
Alignment:
Q  526 cggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  667680 cggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 667630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 734002 - 733968
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||||||||| |||||||||||||||||||||    
T  734002 cgagacaatacaactttttgtttccaacattaaaa 733968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 6367815 - 6367781
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||||||||||| |||||||||||||||||||    
T  6367815 cgagacaatacaattctttgtttccaacattaaaa 6367781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 12166234 - 12166180
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||| |||||||||||||||||||| ||||||||    ||||||||||||||||    
T  12166234 catgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 12166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 571
Target Start/End: Complemental strand, 12379078 - 12379044
Alignment:
Q  537 ggttcggttgacttttaaaatacaatccaaaccaa 571  Q
    |||| ||||||||||||||||||||||||||||||    
T  12379078 ggtttggttgacttttaaaatacaatccaaaccaa 12379044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 514
Target Start/End: Complemental strand, 12379154 - 12379092
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    |||||||||||||  ||| ||||||||||||||||||  ||||| |||| ||||| |||||||    
T  12379154 taggggtgttcgcggtgcagtttggttcgattttgagactaaaaatcattcgaaccgcaagat 12379092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 30002024 - 30002078
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||  ||||||||    ||||||||||||||||    
T  30002024 catgcggtttggtttggttcggttgttttttaaaaagtcatccaaaccaaaccaa 30002078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 40109669 - 40109615
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||||||| |||||||| |||  |||||||||||||||| | ||||||||||    
T  40109669 catgcggtttgatttggttcagttatcttttaaaatacaatctacaccaaaccaa 40109615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 42544671 - 42544725
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| |||||| |    ||||||||||||||||    
T  42544671 catgcggtttggtttggttcggttgatttttaagaagtcatccaaaccaaaccaa 42544725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 2422824 - 2422873
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||| ||||||||||||||||| ||||   ||||||||||    
T  2422824 ggtttggtttggtttggttgacttttaaaatataatctggaccaaaccaa 2422873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 685
Target Start/End: Original strand, 2422947 - 2422984
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgttt 685  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  2422947 ttaaaaaggtaaaacacgacatattttcaaaaatgttt 2422984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 6e-45; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 452 - 641
Target Start/End: Complemental strand, 36106560 - 36106372
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggttt-ggtttggttcggttgactt 550  Q
    ||||| |||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||       |||||||||| |||||||||||||||||||    
T  36106560 tagggatgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaaaaaacatgcggttttggtttggttcggttgactt 36106461  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgttt 641  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||||||||        |||||||||||||||||||||||    
T  36106460 ttaaaataaaatccgaaccaaaccaaaccaatgcggtttgagttggatcagttggtgcgg--ttttttcgagacaatacaattttttgttt 36106372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 452 - 653
Target Start/End: Complemental strand, 5122524 - 5122323
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  |||||||||||||| |||||||| ||||||||||   |||  ||||||       ||||||||||| ||||||||||||||||||    
T  5122524 taggggtgtttgcggtgcggtttggttcggttttgagggtaaaagtcatataaaccacaagataaaaaagcatgcggtttgatttggttcggttgacttt 5122425  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaa 651  Q
     |||||| ||||| |||||||||||||||||||||| || |||||||||||| ||| ||        |||||||||||||||||||||||| ||||||||    
T  5122424 aaaaataaaatccgaaccaaaccaaaccaatgtggtctgggttggatcgatttgtgtggctttttttcgagacaatacaattttttgtttctaacattaa 5122325  T
Q  652 aa 653  Q
    ||    
T  5122324 aa 5122323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 453 - 653
Target Start/End: Complemental strand, 48293544 - 48293351
Alignment:
Q  453 aggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttt 552  Q
    ||||||||||||  ||| |||||||||| ||||||||||||||||||||||||| ||||| |       ||||||||||||||||||||||||| |||||    
T  48293544 aggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtctttt 48293445  T
Q  553 aaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaa 652  Q
    |||||| ||||| |||||||     |||||| |||||| ||||||||| |||||| ||        ||||||||||||||||||||||||||||||||||    
T  48293444 aaaataaaatccgaaccaaa-----ccaatgcggtttgggttggatcggttggtgagg--ttttttcgagacaatacaattttttgtttccaacattaaa 48293352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 471 - 653
Target Start/End: Original strand, 48338303 - 48338483
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    |||||||||| |||| |||||||||||||||||||| | |||||       ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  48338303 gtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa-catgcagtttggtttggttcggttgacttttaaaataaaatccaaacca 48338401  T
Q  571 aaccaaaccaatgtggtttgagttggatc-gattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||| ||||| ||||||| ||||||| | |||||| ||        ||||||||||||||||||||||| |||||||||||    
T  48338402 aaccaaatcaatgcggtttgaattggatcgggttggtgtgg--ttttttcgagacaatacaattttttgttttcaacattaaaa 48338483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 451 - 581
Target Start/End: Complemental strand, 23120398 - 23120268
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  ||||||||| ||||||||||| | |||||||||||||||| |||||||       ||||||||||||||||||||| |||||||    
T  23120398 ctaggggtgttcgcggtgcggtttgattcgattttgaaggtaaaagtcatccgaaccgcaagataaaaaagcatgcggtttggtttggttcgattgactt 23120299  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    | |||| |  |||||||||||||||||||||    
T  23120298 taaaaaaaacatccaaaccaaaccaaaccaa 23120268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 590
Target Start/End: Complemental strand, 40900224 - 40900085
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  |||||||||||||| |||||||  |||||||||||| |||||| ||||       |||||||||||||||||||| ||||| ||    
T  40900224 ctaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcagttgattt 40900125  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||    ||||||||||||||||||||||| ||||||    
T  40900124 ttaaaaagtcatccaaaccaaaccaaaccaatgcggtttg 40900085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 471 - 576
Target Start/End: Complemental strand, 23450105 - 23450000
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    |||| ||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  23450105 gtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaatataatccacacca 23450006  T
Q  571 aaccaa 576  Q
    ||||||    
T  23450005 aaccaa 23450000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 523 - 608
Target Start/End: Original strand, 18396342 - 18396427
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    ||||||||||||||||||| |||||||||||| ||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||    
T  18396342 atgcggtttggtttggttcagttgacttttaagataaaatccgaacaaaaccaaaccaatgtggtttgggttggatcggttggtgc 18396427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 653
Target Start/End: Complemental strand, 32223459 - 32223256
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||||||||| |||| ||||||||||||||||||||| ||  | |||||       |||||||||||| || |||| ||| |||||    
T  32223459 taggggtgttcgcggtgcggtttgattcggttttgaggttaaaagtcatccaaatcgaaagataaaaaagcatgcggtttggatttgttccgtttacttt 32223360  T
Q  552 taaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaac 646  Q
    ||||| |||||     |||||||||||||||| |||| |||||| ||| ||||| ||| |||||         |||||||||||||||||||||||||||    
T  32223359 taaaacacaatctgaaccaaaccaaaccaaacaaatgcggtttgggttagatcggttgatgcggtttttt---gagacaatacaattttttgtttccaac 32223263  T
Q  647 attaaaa 653  Q
    |||||||    
T  32223262 attaaaa 32223256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 590
Target Start/End: Original strand, 20986364 - 20986507
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| || |||||||||| |||| |||||| | |||||||||||| ||| |||||||        ||||||||||||||||||||||||||||     
T  20986364 taggggtgtttgcgatgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagtatgcggtttggtttggttcggttgactta 20986463  T
Q  552 taaaatacaat-----ccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||| |||     ||||||||||||||||||||| ||||||    
T  20986464 taaaataaaatatgaaccaaaccaaaccaaaccaatgcggtttg 20986507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 452 - 583
Target Start/End: Complemental strand, 40806958 - 40806827
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  || ||||||||||| |||||||  |||||||||||| ||| || ||||       |||||| ||||||||||||||||||| |||    
T  40806958 taggggtgtttgcggtgtggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcgatttggtttggttcggttgatttt 40806859  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatg 583  Q
    ||||| |  |||||||||||||||||||||||    
T  40806858 taaaaaatcatccaaaccaaaccaaaccaatg 40806827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 653
Target Start/End: Complemental strand, 48602587 - 48602465
Alignment:
Q  524 tgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgaga 623  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||     |||||| |||||| ||||||||| |||||||||        ||| |    
T  48602587 tgcggtttggtttggttcggttgactttgaaaatacaatcctaaccaaa-----ccaatgcggtttgggttggatcggttggtgcgg--ttttatcgaaa 48602495  T
Q  624 caatacaattttttgtttccaacattaaaa 653  Q
    ||||||||||| |||||| |||||||||||    
T  48602494 caatacaatttgttgttttcaacattaaaa 48602465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 455 - 576
Target Start/End: Complemental strand, 5262101 - 5261980
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    |||||||||| |||||||||| |||| |||||||  |||||||||||| ||| |||||||       ||||||||||||||| |||| ||||| ||||||    
T  5262101 gggtgttcgcgatgcggtttgattcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttagttcagttgatttttaa 5262002  T
Q  555 aatacaatccaaaccaaaccaa 576  Q
    ||    ||||||||||||||||    
T  5262001 aaagtcatccaaaccaaaccaa 5261980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 576
Target Start/End: Original strand, 21069003 - 21069112
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||        |||| |||||||| |||| ||||||||||||||||  ||| | |    
T  21069003 tgcggtttagttcgattttgaggttaaaagtcattcgaactgcaaaataaataaatatgcagtttggttcggtttggttgacttttaaaattaaattcga 21069102  T
Q  567 accaaaccaa 576  Q
    ||||||||||    
T  21069103 accaaaccaa 21069112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 599
Target Start/End: Original strand, 42198737 - 42198873
Alignment:
Q  457 gtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaa 556  Q
    ||||||||  ||| |||||||||||||||||||||||| ||||||  ||| |||||||       |||||||||| |||| |||     |||||||||||    
T  42198737 gtgttcgcggtgcagtttggttcgattttgaggttaaatgtcatcataaccgcaagataaaaaa-catgcggttttgttttgtt-----gacttttaaaa 42198830  T
Q  557 tacaatccaaaccaaaccaaaccaatgtggtttgagttggatc 599  Q
    || ||||  ||||||||||||| ||||||||||||||||||||    
T  42198831 taaaatctgaaccaaaccaaactaatgtggtttgagttggatc 42198873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 29636786 - 29636845
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||  | |||||||||||||||||||||    
T  29636786 catgcggtttggtttggttcggttgatttttaaaaagccatccaaaccaaaccaaaccaa 29636845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 590
Target Start/End: Complemental strand, 54274125 - 54274022
Alignment:
Q  484 ttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    |||||||||||| |||||||||| |||||||       ||||||||||||||||||||||    ||||||||||  || || ||||||||||||||||||    
T  54274125 ttgaggttaaaactcatccgaaccgcaagatagaaaatcatgcggtttggtttggttcggg---cttttaaaatgaaaaccgaaccaaaccaaaccaatg 54274029  T
Q  584 tggtttg 590  Q
    |||||||    
T  54274028 tggtttg 54274022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 583
Target Start/End: Complemental strand, 10778613 - 10778482
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||| |  ||||||||| |||||||||||| |||||||| ||| |||| |||||||       || |||||||| ||||||| ||||| ||||    
T  10778613 taggggtgttcacggtgcggtttgattcgattttgagattaaaagttatctgaaccgcaagataaaaaaacacgcggtttgatttggtttggttggcttt 10778514  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatg 583  Q
    | ||||  || || ||||||||||||||||||    
T  10778513 ttaaatgaaaacctaaccaaaccaaaccaatg 10778482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 19753590 - 19753532
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  19753590 atgcggtttgatttggttcggttgacttttaaaataaaattcgaaccaaaccaaaccaa 19753532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 19786216 - 19786274
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  19786216 atgcggtttgatttggttcggttgacttttaaaataaaattcgaaccaaaccaaaccaa 19786274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 451 - 590
Target Start/End: Original strand, 32136634 - 32136773
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||| ||| |||||||||||||| ||||||   ||||||||| || |||  | ||||       |||||| |||||||||||||| |||| ||    
T  32136634 ctaggggtgtttgcagtgcggtttggttcggttttgaacataaaagtcacccaaacctcgagataaaaaagcatgcgatttggtttggttcgattgattt 32136733  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||    ||||||||||||||||||||||| ||||||    
T  32136734 ttaaaaattcatccaaaccaaaccaaaccaatgcggtttg 32136773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 543 - 654
Target Start/End: Complemental strand, 18319615 - 18319506
Alignment:
Q  543 gttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttc 642  Q
    |||||||||||||||| ||| |  ||||||||||||||||| |||||| ||||||||| |||||||||          |||||||||||||||||||||     
T  18319615 gttgacttttaaaataaaattcgtaccaaaccaaaccaatgcggtttgggttggatcggttggtgcggtttttcta--agacaatacaattttttgtttt 18319518  T
Q  643 caacattaaaaa 654  Q
     |||||||||||    
T  18319517 taacattaaaaa 18319506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 543 - 654
Target Start/End: Original strand, 18399066 - 18399175
Alignment:
Q  543 gttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttc 642  Q
    |||||||||||||||| ||| |  ||||||||||||||||| |||||| ||||||||| |||||||||          |||||||||||||||||||||     
T  18399066 gttgacttttaaaataaaattcgtaccaaaccaaaccaatgcggtttgggttggatcggttggtgcggtttttcta--agacaatacaattttttgtttt 18399163  T
Q  643 caacattaaaaa 654  Q
     |||||||||||    
T  18399164 taacattaaaaa 18399175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 29644195 - 29644136
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  29644195 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 29644136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 50571028 - 50570969
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  50571028 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 50570969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 15723895 - 15723953
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||| |||| ||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  15723895 atgcagtttagtttggttcggttgactttaaaaataacatccaaaccaaaccaaaccaa 15723953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 14866789 - 14866842
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaacca 575  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| |||||||    
T  14866789 catgcggtttggtttggttcagttgacttttaaaataaaatctaaatcaaacca 14866842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 581
Target Start/End: Complemental strand, 18536708 - 18536655
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||| |||||||    
T  18536708 gtttgggttggttcggttgacttttaaaacacaatccgaaccaaacaaaaccaa 18536655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 647 - 692
Target Start/End: Complemental strand, 23625839 - 23625794
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaattt 692  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||    
T  23625839 attaaaaagttaaaacacaacatattttcaacaatgttttaaattt 23625794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 573
Target Start/End: Original strand, 45983345 - 45983447
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    ||||||||||  ||||| | ||||||| ||| |||| |||||||       |||||||||||||||| ||||||||||||| ||||||  ||||||||||    
T  45983345 gtttggttcggctttgaagataaaagttatctgaaccgcaagataaaaaatcatgcggtttggtttgattcggttgactttaaaaataacatccaaacca 45983444  T
Q  571 aac 573  Q
    |||    
T  45983445 aac 45983447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 706
Target Start/End: Original strand, 6101991 - 6102089
Alignment:
Q  619 cgagacaatacaattttttgtttccaaca-----------ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||||||||||||||||||||||||||||           |||||| | |||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  6101991 cgagacaatacaattttttgtttccaacagtaaaatcaagttaaaaggataaaacacaacatattttcaacgatgttttaaatttcatccaacattaca 6102089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 610
Target Start/End: Complemental strand, 11031701 - 11031617
Alignment:
Q  531 tggtttggttcggttgacttttaaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||||||| ||||||||||||||||| ||||     ||| ||||| |||| |||||||||||| ||||||||| |||||||||    
T  11031701 tggtttggtttggttgacttttaaaataaaatcttaaccaacccaaatcaaatcaatgtggtttgggttggatcggttggtgcgg 11031617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 610
Target Start/End: Complemental strand, 23625970 - 23625878
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||| |||||||||| ||||||||||||||| ||||     ||| |||||||||| ||||| ||||||  |||||||| |||||||||    
T  23625970 atgcggttttgtttggttcgcttgacttttaaaataaaatctgaatcaacccaaaccaaatcaatgcggtttggattggatcggttggtgcgg 23625878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 576
Target Start/End: Original strand, 29232767 - 29232819
Alignment:
Q  524 tgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||| |||||||    
T  29232767 tgcggtttggtttagttcggttgacttttaaaataaaatccgaactaaaccaa 29232819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 576
Target Start/End: Original strand, 48996026 - 48996151
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||| || |||||||||||||||| |   ||||| |||||| ||| || | ||       |||| ||||||||||||||||||||| ||    
T  48996026 ctaggggtgttcgcagtgtggtttggttcgattttaatcataaaaatcatccaaaccgcgaaataaaaaagcatgtggtttggtttggttcggttgattt 48996125  T
Q  551 ttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||    ||||||||||||||||    
T  48996126 ttaaaaagttatccaaaccaaaccaa 48996151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 540
Target Start/End: Original strand, 6333259 - 6333347
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggtt 540  Q
    |||||||||||||  ||||||||||||||||||||||   ||||||||||| ||| || ||||       |||||||||||||||||||    
T  6333259 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtt 6333347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 604
Target Start/End: Original strand, 28147795 - 28147874
Alignment:
Q  525 gcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattg 604  Q
    |||||||||||| |||  |||||||||||||||| ||||  | |||||||||||||||| ||||||  || |||||||||    
T  28147795 gcggtttggtttagttttgttgacttttaaaatataatctgatccaaaccaaaccaatgcggtttggatttgatcgattg 28147874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 647 - 706
Target Start/End: Original strand, 29232891 - 29232950
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||||| || ||||| |||||||||||||||||||||||| |||||||| | ||||||||    
T  29232891 attaaacagctaaaaaacaacatattttcaacaatgttttaaatttcatccaacattaca 29232950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 598
Target Start/End: Complemental strand, 29335179 - 29335108
Alignment:
Q  532 ggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggat 598  Q
    |||||||||||||||  ||||||||||||||     ||||||||||||||||||||  ||||||||||||||    
T  29335179 ggtttggttcggttggtttttaaaatacaatatgaaccaaaccaaaccaaaccaatacggtttgagttggat 29335108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 42557737 - 42557796
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||| ||||||||    
T  42557737 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaatcaaaccaa 42557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 556
Target Start/End: Original strand, 43630520 - 43630624
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||| ||||||||  ||||||||||||||||||||||  |||||||||||| ||| |  ||||        |||||||||||||||||| |||||| |||    
T  43630520 taggagtgttcgcggtgcggtttggttcgattttgagtataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttggtttggttgatttt 43630619  T
Q  552 taaaa 556  Q
    |||||    
T  43630620 taaaa 43630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 46471582 - 46471649
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    ||||||| |||||||||| ||| |||||  ||||||||||||||||||| ||||||||| | ||||||    
T  46471582 ttaaaaaagtaaaacacagcatgttttcggcaatgtttttaatttcatttcacattacaatttcattt 46471649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 21069198 - 21069240
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaa 689  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  21069198 attaaaaagctaaaacactacatattttcaacaatgtttttaa 21069240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 30194045 - 30193991
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  30194045 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 30193991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 558
Target Start/End: Original strand, 4642364 - 4642470
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  | |||||||||||| |||||||| ||||||| |||||||| |||||||        |||  ||||| ||||||||| ||||||||    
T  4642364 taggggtgttggcggtacggtttggttcggttttgaggctaaaagttatccgaaccgcaagataaataagtatgtagtttgatttggttcgattgacttt 4642463  T
Q  552 taaaata 558  Q
    |||||||    
T  4642464 taaaata 4642470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 23937587 - 23937534
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  23937587 atgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 23937534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 36077586 - 36077639
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  36077586 atgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 36077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 608
Target Start/End: Original strand, 40494440 - 40494521
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    ||||||||||||||| || ||||||||||||| | |  | | |||||||||  ||||||||||| ||||||||| |||||||    
T  40494440 ggtttggtttggttcagtagacttttaaaataaagtttatatcaaaccaaattaatgtggtttgtgttggatcggttggtgc 40494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 684
Target Start/End: Original strand, 4688824 - 4688860
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtt 684  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4688824 ttaaaaaggtaaaacacaacatatttgcaacaatgtt 4688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 693
Target Start/End: Original strand, 31109448 - 31109517
Alignment:
Q  620 gagacaatacaattttttgtttccaacattaaaaaggtaaaacacaacatattttcaacaatgtttttaatttc 693  Q
    |||||||||||| |||||||||| ||||||||    || ||| ||||| |||||||||||||||||| ||||||    
T  31109448 gagacaatacaactttttgtttcgaacattaa----gtcaaaaacaacttattttcaacaatgttttaaatttc 31109517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 671 - 715
Target Start/End: Complemental strand, 36106374 - 36106330
Alignment:
Q  671 ttttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||    
T  36106374 ttttcgacaatgtttttaatttcattccacattacactttcattt 36106330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 692
Target Start/End: Original strand, 42198931 - 42198975
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaattt 692  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||    
T  42198931 ttaaaaagttaaaacacaacatattttcgacaatgttttaaattt 42198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 692
Target Start/End: Original strand, 49640989 - 49641033
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaattt 692  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||    
T  49640989 ttaaagagttaaaacacaacatattttcaacaatatttttaattt 49641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 506
Target Start/End: Original strand, 5061294 - 5061333
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaac 506  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  5061294 tgcggtttggttcgattttgagattaaaagtcttccgaac 5061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 610
Target Start/End: Original strand, 8311898 - 8311985
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||| |||||||||||||||| | ||||||||||||  |||  |  ||||||||||| |||| ||||  ||||||||| |||||||||    
T  8311898 atgcagtttggtttggttcggattacttttaaaataatatctgattcaaaccaaaccgatgtagtttaggttggatcggttggtgcgg 8311985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 695
Target Start/End: Original strand, 8312036 - 8312083
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    |||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  8312036 ttaaaaagctaaaacacaacaaattttcagcaatgttttaaatttcat 8312083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 11824054 - 11824011
Alignment:
Q  91 cttgagactgcatataccatttgaactgatccacctccaagatc 134  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||    
T  11824054 cttgacactgcatatgccatttgaaccgatccacctccaagatc 11824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 706
Target Start/End: Original strand, 27743343 - 27743402
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||| ||||||| | |||||||||||||||||||  |||||||| | ||||||||    
T  27743343 attaaaaagctaaaacaaagcatattttcaacaatgtttaaaatttcatccaacattaca 27743402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 706
Target Start/End: Original strand, 28147926 - 28147984
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||| |||||||||||| || |||||||||||||| |||||||| | ||||||||    
T  28147926 attaaaaagctaaaacacaaca-atcttcaacaatgttttaaatttcatacaacattaca 28147984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 589
Target Start/End: Original strand, 4688690 - 4688756
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggttt 589  Q
    |||| |||||||| | ||||||||||||||||||    |||  ||||||||||||||||||||||||    
T  4688690 atgcagtttggttcgattcggttgacttttaaaaagttatcttaaccaaaccaaaccaatgtggttt 4688756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 715
Target Start/End: Complemental strand, 18536533 - 18536495
Alignment:
Q  677 acaatgtttttaatttcattccacattacattctcattt 715  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  18536533 acaatgtttttaacttcattccacattacattttcattt 18536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 653
Target Start/End: Original strand, 26674223 - 26674256
Alignment:
Q  620 gagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||||||||||||||||||||||| ||||||    
T  26674223 gagacaatacaattttttgtttccaactttaaaa 26674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 500
Target Start/End: Original strand, 27743181 - 27743210
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcat 500  Q
    ||||||||||||||||||||||||||||||    
T  27743181 gtttggttcgattttgaggttaaaagtcat 27743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 706
Target Start/End: Original strand, 48338528 - 48338557
Alignment:
Q  677 acaatgtttttaatttcattccacattaca 706  Q
    ||||||||||||||||||||||||||||||    
T  48338528 acaatgtttttaatttcattccacattaca 48338557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 49640861 - 49640914
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||| |||| || ||||||||||||||||| ||| | |||||||||||    
T  49640861 atgcggtttgatttgatttggttgacttttaaaataaaattcgaaccaaaccaa 49640914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 51907215 - 51907256
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaa 689  Q
    ||||||||||||||||||||||| || || ||||||||||||    
T  51907215 ttaaaaaggtaaaacacaacatacttccaccaatgtttttaa 51907256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 6e-42; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 452 - 715
Target Start/End: Original strand, 44336714 - 44336993
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnn-catgcggtttggtttggttcggttgactt 550  Q
    |||| ||||||||  |||||||||||||| ||||||| ||||||||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  44336714 taggagtgttcgcggtgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgactt 44336813  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa-----tgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaatttt-ttgtttcca 644  Q
    |||||||||||||| ||||||||||||||||     ||||||||| |||||||| ||||||||||        | |||||||| ||     |||||||||    
T  44336814 ttaaaatacaatccgaaccaaaccaaaccaaacctatgtggtttg-gttggatcaattggtgcggtttttt--ctagacaataaaaaaaaattgtttcca 44336910  T
Q  645 acattaaaaaggtaaaacacaacatattttcaacaatgtttt------------taatttcattccacattacattctcattt 715  Q
    |||| |||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||    
T  44336911 acatcaaaaaggtaaaacacaacatattttcaacaatgttttcgacaatatttttaatttcattccacattacattctcattt 44336993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 452 - 610
Target Start/End: Original strand, 40436378 - 40436537
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnn-catgcggtttggtttggttcggttgactt 550  Q
    |||||||||||||  |||||||||||||| |||||||| ||||||| |||| || ||||||||        ||||| |||||||||||||||||||||||    
T  40436378 taggggtgttcgcggtgcggtttggttcggttttgagggtaaaagtgatccaaattgcaagataaaaaaaacatgccgtttggtttggttcggttgactt 40436477  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    | |||||| |||   |||| ||||||||||||| |||||| ||||||||| |||||||||    
T  40436478 taaaaataaaatttgaaccgaaccaaaccaatgcggtttgggttggatcggttggtgcgg 40436537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 9012972 - 9012819
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  || || ||||||||||||||||| ||||||||| |||||| |||||||         |||||||||||||| ||     ||||||    
T  9012972 taggggtgttcgcggtgtgggttggttcgattttgaggctaaaagtcacccgaaccgcaagataaaaatgtgtgcggtttggtttgatt-----gacttt 9012878  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||    
T  9012877 taaaatacaatccgaaccaaaccaaaccaatgcggtttgggttggatcggttggtgcgg 9012819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 455 - 558
Target Start/End: Complemental strand, 22811310 - 22811207
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||||||  |||||||||||| |||||||||| ||||||||||| ||||||||||||        |||| |||||||||||||||||||||||||||    
T  22811310 gggtgttcgcggtgcggtttggtttgattttgaggctaaaagtcatctgaactgcaagataaatatgtatgctgtttggtttggttcggttgacttttaa 22811211  T
Q  555 aata 558  Q
    ||||    
T  22811210 aata 22811207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 653
Target Start/End: Original strand, 6591245 - 6591374
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncga 621  Q
    |||||||||||||||||||||||||||||||| |||     ||||||||||||||| |||||||||||||||||||| | ||||| |||         ||    
T  6591245 ggtttggtttggttcggttgacttttaaaataaaattctaaccaaaccaaaccaaaacaatgtggtttgagttggattggttggtacggttttttt--ga 6591342  T
Q  622 gacaatacaattttttgtttccaacattaaaa 653  Q
    |||||||||||||||| |||||||| ||||||    
T  6591343 gacaatacaattttttatttccaactttaaaa 6591374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 452 - 576
Target Start/End: Original strand, 10661096 - 10661220
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||||||| |||||||  |||||||||||| ||| || ||||       |||||||||||||||||||||||||| |||    
T  10661096 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 10661195  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    |||||    ||||||||||||||||    
T  10661196 taaaaagtcatccaaaccaaaccaa 10661220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 583
Target Start/End: Original strand, 33068207 - 33068339
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||||||||||||   |||||||||||||| |||||||  |||||||||||| ||| |||||||       |||||||||||||||||||| ||||| ||    
T  33068207 ctaggggtgttcgtggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttggttcagttgattt 33068306  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    ||||||    |||||||||||| ||||||||||    
T  33068307 ttaaaaagtcatccaaaccaaatcaaaccaatg 33068339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 470 - 573
Target Start/End: Complemental strand, 7428555 - 7428452
Alignment:
Q  470 ggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacc 569  Q
    ||||||||||| || ||||||||||||||||| |||| ||| |||       ||||||||||||||||||||||||||||||||||||| ||| | ||||    
T  7428555 ggtttggttcggttatgaggttaaaagtcatctgaaccgcatgataaaaatgcatgcggtttggtttggttcggttgacttttaaaataaaattcgaacc 7428456  T
Q  570 aaac 573  Q
    ||||    
T  7428455 aaac 7428452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 558
Target Start/End: Original strand, 11218892 - 11218998
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||||   ||||||||||||||||||||||| |||||||||||||||  |||||||        ||||| |||||||||||| ||||||||||    
T  11218892 taggggtgttcggggtgcggtttggttcgattttgaggctaaaagtcatccgaaacgcaagataaataagtatgcgatttggtttggtttggttgacttt 11218991  T
Q  552 taaaata 558  Q
    |||||||    
T  11218992 taaaata 11218998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 15272446 - 15272317
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||| |||||  ||||||||||| || ||||||| ||||||||||||||||| ||| |||       || ||||||||||||||||  |||||||||    
T  15272446 taggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtttagttgacttt 15272347  T
Q  552 taaaatacaatccaaaccaaaccaaaccaa 581  Q
    | ||  ||||||| ||||||||||||||||    
T  15272346 tcaagcacaatccgaaccaaaccaaaccaa 15272317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 15452815 - 15452686
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||| |||||  ||||||||||| || ||||||| ||||||||||||||||| ||| |||       || ||||||||||||||||  |||||||||    
T  15452815 taggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtttagttgacttt 15452716  T
Q  552 taaaatacaatccaaaccaaaccaaaccaa 581  Q
    | ||  ||||||| ||||||||||||||||    
T  15452715 tcaagcacaatccgaaccaaaccaaaccaa 15452686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 527 - 653
Target Start/End: Original strand, 6616940 - 6617069
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncga 621  Q
    ||||||||||| |||||||||||||||||||| |||     ||||||||||||||| ||||||||||||||| |||| | ||||| |||         ||    
T  6616940 ggtttggtttgtttcggttgacttttaaaataaaattctaaccaaaccaaaccaaaacaatgtggtttgagtaggattggttggtacggttttttt--ga 6617037  T
Q  622 gacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||||||||||||||||||||| ||||||    
T  6617038 gacaatacaattttttgtttccaactttaaaa 6617069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 598
Target Start/End: Original strand, 4785198 - 4785329
Alignment:
Q  472 tttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaat-----ccaa 566  Q
    ||||||||| ||||||| ||||||||||| ||||| |||  ||        |||||||||| ||||||||||||||||||||||||| |||     ||||    
T  4785198 tttggttcggttttgagattaaaagtcatacgaaccgcagaataaaaaagtatgcggtttgatttggttcggttgacttttaaaatataatatgaaccaa 4785297  T
Q  567 accaaaccaaaccaatgtggtttgagttggat 598  Q
    ||||||||||||||||| ||||||| ||||||    
T  4785298 accaaaccaaaccaatgcggtttgaattggat 4785329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 36340829 - 36340771
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36340829 atgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaaaccaa 36340771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 581
Target Start/End: Complemental strand, 5803387 - 5803257
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||| ||||||||||||||||||  ||  ||| | |||||| ||| || |||        |||||||||||||||||||||||||| ||    
T  5803387 ctaggggtgttcgcagtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgattt 5803288  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||    |||||||||||||||||||||    
T  5803287 ttaaaaagtcatccaaaccaaaccaaaccaa 5803257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 607
Target Start/End: Original strand, 19539346 - 19539475
Alignment:
Q  473 ttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaa 572  Q
    |||||||| ||||| || ||||||| ||||||||| ||||||       ||||||||||||| |||||     ||||||||||||| ||||| |||||||    
T  19539346 ttggttcggttttggggctaaaagttatccgaacttcaagataaaaatacatgcggtttggtatggtt-----gacttttaaaataaaatccgaaccaaa 19539440  T
Q  573 ccaaaccaatgtggtttgagttggatcgattggtg 607  Q
    ||||||||||| || ||| ||||||||| ||||||    
T  19539441 ccaaaccaatgcggattgggttggatcggttggtg 19539475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 36910472 - 36910347
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  |||||||||||| |||||||||  |||||||||||  ||| || ||||       |||||||||| ||||||||||||||| ||    
T  36910472 ctaggggtgttcgcggtgcggtttggtttgattttgagcataaaagtcatcaaaaccgcgagataaaaaagcatgcggtttagtttggttcggttgattt 36910373  T
Q  551 ttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||    ||||||||||||||||    
T  36910372 ttaaaaagtcatccaaaccaaaccaa 36910347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 581
Target Start/End: Complemental strand, 31497664 - 31497610
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  31497664 ggtttggtttggttcggttgactttaaaaataacatccaaaccaaaccaaaccaa 31497610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 33565970 - 33566028
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  33565970 atgcggtttggtttggttcggttgacttctaaaataaaattcgaaccaaaccaaaccaa 33566028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 581
Target Start/End: Complemental strand, 24682215 - 24682102
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    ||||| |||||||| |||||||| ||||| |||||||||| |||||||        |||| |||||||||| |||| ||||||||||||||| ||| | |    
T  24682215 tgcggcttggttcggttttgaggctaaaattcatccgaaccgcaagataaataagtatgcagtttggtttgattcgattgacttttaaaataaaat-cga 24682117  T
Q  567 accaaaccaaaccaa 581  Q
    |||||||||||||||    
T  24682116 accaaaccaaaccaa 24682102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 591
Target Start/End: Complemental strand, 35688475 - 35688406
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttga 591  Q
    ||||| ||||| ||||||||| ||||||||||||||  || || ||||||||||||||||||||||||||    
T  35688475 catgcagtttgatttggttcgattgacttttaaaatgaaaacccaaccaaaccaaaccaatgtggtttga 35688406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 12883870 - 12883777
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggtt 545  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||| |||||  ||| ||        |||||||||||||||||||||||    
T  12883870 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagtcattcgaaccacaaaataaataagtatgcggtttggtttggttcggtt 12883777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 466 - 583
Target Start/End: Original strand, 45366264 - 45366381
Alignment:
Q  466 atgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatcca 565  Q
    |||| ||||||| || |||||||||||||||||||  |||| |||||||       ||| ||||||| ||||||||||||| ||||||||||  || ||     
T  45366264 atgcagtttggtccggttttgaggttaaaagtcatatgaaccgcaagataaaaaagcatacggtttgatttggttcggttgccttttaaaatgaaaaccg 45366363  T
Q  566 aaccaaaccaaaccaatg 583  Q
    || |||||||||||||||    
T  45366364 aatcaaaccaaaccaatg 45366381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 3006642 - 3006583
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  3006642 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 3006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 28441432 - 28441488
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaa 511  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||| |||| ||||    
T  28441432 gggtgtacgcaatgtggtttggttcgattttgaggctaaaagtcatcggaaccgcaa 28441488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 12074163 - 12074129
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    |||||||||||||||||||||||||||||||||||    
T  12074163 cgagacaatacaattttttgtttccaacattaaaa 12074129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 705
Target Start/End: Complemental strand, 12193402 - 12193344
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattac 705  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||| || | |||||||    
T  12193402 attaaaaagctaaaacacaacatattttcagcaatgttttaaattttatccaacattac 12193344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 705
Target Start/End: Complemental strand, 12437830 - 12437772
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattac 705  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||| || | |||||||    
T  12437830 attaaaaagctaaaacacaacatattttcagcaatgttttaaattttatccaacattac 12437772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 14549237 - 14549295
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||||||||| ||||||||| ||||||||    |||||||||||||||||||||    
T  14549237 atgcggtttggtttgattcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 14549295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 704
Target Start/End: Complemental strand, 24682019 - 24681965
Alignment:
Q  650 aaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacatta 704  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||| | ||||||    
T  24682019 aaaaaggtaaaacacaacatatttacaaaaatgttttaaatttcatccaacatta 24681965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 704
Target Start/End: Original strand, 11017154 - 11017211
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacatta 704  Q
    |||| |||| |||||||||||||||||||| ||||||||| |||||||| | ||||||    
T  11017154 attacaaagataaaacacaacatattttcagcaatgttttaaatttcatccaacatta 11017211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 704
Target Start/End: Original strand, 33566096 - 33566153
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacatta 704  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||||| | ||||||    
T  33566096 attaaaaagctaaaacacaacatattttcagtaatgttttaaatttcatccaacatta 33566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 695
Target Start/End: Complemental strand, 18755266 - 18755218
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||| ||||||||||||||||||||| ||| |||| ||||||||    
T  18755266 attaaaaagttaaaacacaacatattttcaaaaatattttaaatttcat 18755218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 695
Target Start/End: Complemental strand, 30254056 - 30254008
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||| | ||||||||||| |||||||||||||||||| ||||||||    
T  30254056 attaaaaggttaaaacacaacctattttcaacaatgttttaaatttcat 30254008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 576
Target Start/End: Original strand, 44672750 - 44672855
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    |||||||||| |||||||  |||||||||||| ||  || ||||       ||||||||||||||||||||| |||| ||||||||    ||||||||||    
T  44672750 gtttggttcggttttgagcataaaagtcatccaaatcgcgagataaaaaaacatgcggtttggtttggttcgattgatttttaaaaagtcatccaaacca 44672849  T
Q  571 aaccaa 576  Q
    ||||||    
T  44672850 aaccaa 44672855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 506
Target Start/End: Original strand, 11017022 - 11017061
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaac 506  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  11017022 tgcggtttggttcgattttgaggctaaaattcatccgaac 11017061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 28073331 - 28073207
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||| | |  ||| ||| ||||||||||| |||| |||| ||       |||| ||||| ||||||||| |||||||||    
T  28073331 taggggtgttcgcggtgcggtttggcttgggtttaaggctaaaagtcatctgaaccgcaatataaaaaaacatgtggtttagtttggttcagttgacttt 28073232  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    ||||||  || || |||||||||||    
T  28073231 taaaatgaaaaccgaaccaaaccaa 28073207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 610
Target Start/End: Original strand, 41345912 - 41345991
Alignment:
Q  531 tggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||||| ||||| |||||||||| |||  |||| |||||||||||||| | |||  ||||||| | |||||||||    
T  41345912 tggtttggttcagttgatttttaaaataaaatataaactaaaccaaaccaatgcgatttaggttggattggttggtgcgg 41345991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 598
Target Start/End: Original strand, 6649539 - 6649613
Alignment:
Q  529 tttggtttggttcggttgacttttaaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggat 598  Q
    ||||||||||||| |||||||||||||||| ||||     |||| |||| |||| ||||| ||||||||||||||    
T  6649539 tttggtttggttcagttgacttttaaaataaaatcctaatcaaaacaaagcaaaacaatgcggtttgagttggat 6649613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 573
Target Start/End: Complemental strand, 12660321 - 12660275
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaac 573  Q
    ||||||||||||||||||||| ||| |||||| ||||| ||||||||    
T  12660321 ggtttggtttggttcggttgagtttaaaaataaaatccgaaccaaac 12660275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 590
Target Start/End: Complemental strand, 18170085 - 18170027
Alignment:
Q  532 ggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    |||||||||||||||| ||||||||    ||| ||||||||||||||||||| ||||||    
T  18170085 ggtttggttcggttgagttttaaaaagtcatcaaaaccaaaccaaaccaatgcggtttg 18170027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 514
Target Start/End: Complemental strand, 31497749 - 31497687
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    ||||||||||| | ||||| ||||||| | |||||| | |||||||||||||||| |||||||    
T  31497749 taggggtgttcacgatgcgctttggtttggttttgaaggtaaaagtcatccgaaccgcaagat 31497687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 4267895 - 4267842
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccga 504  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||| |||| ||||    
T  4267895 ctaggggtgttcgcggtgcggtttggatcgattttgaggtaaaatgtcaaccga 4267842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 677
Target Start/End: Complemental strand, 38926365 - 38926336
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaa 677  Q
    ||||||||||||||||||||||||||||||    
T  38926365 ttaaaaaggtaaaacacaacatattttcaa 38926336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 454 - 653
Target Start/End: Original strand, 28790450 - 28790648
Alignment:
Q  454 ggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttta 553  Q
    ||||||||||   |||||||||||||  |||||| ||||||||||||| |||| |||||||       ||||||||||| || | |||||||||||||||    
T  28790450 ggggtgttcgtggtgcggtttggttcagttttgatgttaaaagtcatctgaaccgcaagataaaaaagcatgcggtttgattagattcggttgactttta 28790549  T
Q  554 aaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||| |||||||||        ||||| |||||||||||||||||||||||||||||    
T  28790550 aaataaaatccaaaccaaaccaaaccaatgtggtttgggtcggatcggttggtgcgg-ttttttccgagataatacaattttttgtttccaacattaaaa 28790648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 452 - 715
Target Start/End: Complemental strand, 27301624 - 27301352
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||| |||||||||| ||||||| ||||||| |||||| || |||||||       |||||||||||||||| |||||||||||||    
T  27301624 taggggtgttcgcgctgcagtttggttcggttttgagattaaaagccatccggaccgcaagataaaaaagcatgcggtttggtttgattcggttgacttt 27301525  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaaca---- 647  Q
    ||||||| |||   |||||||||||||||||| |||||| ||  ||||| |||||||||         |||||||||||||||||||||||||| |        
T  27301524 taaaataaaatttgaaccaaaccaaaccaatgcggtttgggtcagatcgtttggtgcggttttttt--gagacaatacaattttttgtttccaaaattaa 27301427  T
Q  648 -------ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
           ||||||||||||||||||| |||||||| |||||||||||||||||||| || |||||| | ||||||    
T  27301426 aatcgagttaaaaaggtaaaacacaaaatattttcgacaatgtttttaatttcatttcatattacaatttcattt 27301352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 653
Target Start/End: Original strand, 17762684 - 17762884
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  || ||||| ||| | |||||||| ||||||||| |||||| || ||||       ||||||||||||||||||||||||||||||    
T  17762684 taggggtgttcgcggtgtggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaacatgcggtttggtttggttcggttgacttt 17762783  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaa 651  Q
    ||||||| ||||| ||||||| |||||| ||||||||||  |||||| | |||||||||        |||||||||||||||||||||||||||||||||    
T  17762784 taaaataaaatccgaaccaaatcaaaccgatgtggtttggattggattggttggtgcgg-tttttttcgagacaatacaattttttgtttccaacattaa 17762882  T
Q  652 aa 653  Q
    ||    
T  17762883 aa 17762884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 610
Target Start/End: Original strand, 41461024 - 41461182
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||| |||||||||| |||| ||  ||||||||| |||||| ||||| |        |||||||||||||||||||||||||||||    
T  41461024 taggggtgttcgcggtgcagtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagtatgcggtttggtttggttcggttgacttt 41461123  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||| ||| | |||||||||||||||||| ||||||  ||| |||| |||||||||    
T  41461124 taaaataaaattcgaaccaaaccaaaccaatgcggtttggattgaatcggttggtgcgg 41461182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 653
Target Start/End: Original strand, 1330952 - 1331147
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| || |||||||||| |||| |||| ||   |||| ||||||||||  |||| |       ||||| | ||||||||||||||||||||||    
T  1330952 taggggtgtttgcgatgcggtttgattcggttttaagacgaaaaatcatccgaaccacaaggtaaaaaagcatgcagattggtttggttcggttgacttt 1331051  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaa 651  Q
    ||||||| |||     ||||||||||||||||||||||| ||||||||  |||||||||        |||||||||||||||||||||||||||||||||    
T  1331052 taaaataaaat-----ccaaaccaaaccaatgtggtttgggttggatcagttggtgcgg-tttttttcgagacaatacaattttttgtttccaacattaa 1331145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 12041729 - 12041605
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  || ||||||||||| |||||||| ||||||||||| |||| | |||||       ||||||||||| ||||||||||||||||||    
T  12041729 taggggtgtttgcggtgtggtttggttcggttttgaggctaaaagtcatctgaaccgtaagataaaaaaacatgcggtttgatttggttcggttgacttt 12041630  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    ||||||| ||||| |||||||||||    
T  12041629 taaaataaaatccgaaccaaaccaa 12041605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 41166332 - 41166399
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  41166332 ttaaaaaggtaaaatacaacatattttcaacaatatttttaatttcattccacattacattttcattt 41166399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 452 - 577
Target Start/End: Complemental strand, 5862771 - 5862646
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||||||||| || |||||||||| |||||||||||  ||  |||| ||        |||||||||||||||||||||||||||||    
T  5862771 taggggtgttcgcggtgcggtttgatttgattttgagggtaaaagtcatctaaatcgcaaaataaaaaagtatgcggtttggtttggttcggttgacttt 5862672  T
Q  552 taaaatacaatccaaaccaaaccaaa 577  Q
    ||||||| ||||| ||||||||||||    
T  5862671 taaaataaaatccgaaccaaaccaaa 5862646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 528 - 653
Target Start/End: Original strand, 13193917 - 13194040
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaat 627  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||  ||||| ||||||||| ||||| |||        | ||| |||    
T  13193917 gtttggtttggttcggttgacttttaaaataaaatccgaaccaaatcaaaccaatgcagtttgggttggatcggttggtacgg--ttttttcaagataat 13194014  T
Q  628 acaattttttgtttccaacattaaaa 653  Q
    |||||||||||||| |||||||||||    
T  13194015 acaattttttgttttcaacattaaaa 13194040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 44979909 - 44979785
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||||||| |||||||  |||||||||||| ||| || ||||       |||||||||||||||||||||||||| |||    
T  44979909 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 44979810  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    |||||    ||||||||||||||||    
T  44979809 taaaaagtcatccaaaccaaaccaa 44979785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 451 - 610
Target Start/End: Complemental strand, 42785770 - 42785611
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  ||||||||||||||||||||||  |||||||||||| ||  |  ||||        |||||||||||||||||||| |||| ||    
T  42785770 ctaggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaatcgtgagataaaaaaggatgcggtttggtttggttcgcttgattt 42785671  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||    || |||||||||||||||||||| ||||||  |||| ||||||| |||||    
T  42785670 ttaaaaactcattcaaaccaaaccaaaccaatgcggtttggattggttcgattgatgcgg 42785611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 610
Target Start/End: Complemental strand, 30761872 - 30761738
Alignment:
Q  476 gttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaacca 575  Q
    |||||||||||||||||||||||||| |||   ||||||       ||||||||||| |||| ||  |||||||||||||||| ||| ||||||||||||    
T  30761872 gttcgattttgaggttaaaagtcatctgaatcacaagataaaaaaacatgcggtttgttttgattatgttgacttttaaaataaaattcaaaccaaacca 30761773  T
Q  576 aaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||||| | |||| ||| ||||| ||| |||||    
T  30761772 aaccaatgcgatttgggttagatcggttgatgcgg 30761738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 653
Target Start/End: Original strand, 44085431 - 44085625
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnn-catgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||  ||||||||||||||  |||||||| | ||||||||| |||| |||||||        |||||||||||||||||||||||||||||    
T  44085431 taggggtgttcgtcatgcggtttggttcagttttgagggttaaagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttcggttgactt 44085530  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacatta 650  Q
    | |||||| |||     |  || |||||||||| |||||| ||||||||| |||||||||        |||||||| |||||||||| ||||||||||||    
T  44085531 taaaaataaaat-----ctgaatcaaaccaatgcggtttgggttggatcggttggtgcgg--ttatttcgagacaacacaatttttt-tttccaacatta 44085622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 450 - 573
Target Start/End: Complemental strand, 15320721 - 15320598
Alignment:
Q  450 cctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgact 549  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||||||| ||| |  |  |       ||||| ||| |||||||||| ||||| |    
T  15320721 cctaggggtgttcgcggtgcggtttggttcgattttgaggctaaaagtcatccaaaccgtgaagtaaaaaagcatgcagttaggtttggttcagttgatt 15320622  T
Q  550 tttaaaatacaatccaaaccaaac 573  Q
    ||||||||| ||||||||||||||    
T  15320621 tttaaaataaaatccaaaccaaac 15320598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 608
Target Start/End: Complemental strand, 36500765 - 36500621
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    ||||||||||| |||||||| |||| |||||||| |||||||||||||||| | || ||       ||| ||||||| |||| || | ||||||||||||    
T  36500765 ggtgttcgcaaagcggtttgattcggttttgaggctaaaagtcatccgaaccgaaa-at-------cattcggtttgatttgctttgattgacttttaaa 36500674  T
Q  556 atacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    |||||||   |||| |||||||||| || |||||| ||||||||| |||||||    
T  36500673 atacaatatgaaccgaaccaaaccattgcggtttgggttggatcggttggtgc 36500621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 576
Target Start/End: Original strand, 44035251 - 44035373
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnn-catgcggtttggtttggttcggttgactttta 553  Q
    |||||||||||  ||||||||||||| |||||||  |||||||||||| ||| |||| ||        |||||||||||||||||||||||||| |||||    
T  44035251 gggtgttcgcagggcggtttggttcggttttgagcataaaagtcatccaaaccgcaaaataaaaaaagcatgcggtttggtttggttcggttgattttta 44035350  T
Q  554 aaatacaatccaaaccaaaccaa 576  Q
    |||    ||||||||||||||||    
T  44035351 aaaagtcatccaaaccaaaccaa 44035373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 467 - 576
Target Start/End: Original strand, 12884488 - 12884592
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| | |        ||||||||||||||     ||||||||||||||||| ||| |||    
T  12884488 tgcggtttggttcgattttaaggttaaaagtcatccaaactgcatggtaaaaaagtatgcggtttggttt-----ggttgacttttaaaataaaattcaa 12884582  T
Q  567 accaaaccaa 576  Q
    ||||||||||    
T  12884583 accaaaccaa 12884592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 609
Target Start/End: Complemental strand, 30759718 - 30759626
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcg 609  Q
    ||||| |||||||||| |||||||| ||||||||||| |||     ||||||||||||||||||||| |||||| ||| ||||| ||||||||    
T  30759718 catgcagtttggtttgattcggttggcttttaaaataaaatttgaaccaaaccaaaccaaaccaatgcggtttgtgttagatcggttggtgcg 30759626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 595
Target Start/End: Original strand, 4657750 - 4657817
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttg 595  Q
    |||||||||  ||||||||| |||||||||| || |||| |||||||||||||||| |||||||||||    
T  4657750 gtttggtttaattcggttgatttttaaaataaaaaccaacccaaaccaaaccaatgcggtttgagttg 4657817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 36413710 - 36413651
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  36413710 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 36413651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 607
Target Start/End: Original strand, 11678014 - 11678092
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtg 607  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||  ||| | || ||||||| |||||||| ||||||    
T  11678014 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaac--aactattgcggtttgaattggatcggttggtg 11678092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 607
Target Start/End: Original strand, 11695492 - 11695570
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtg 607  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||  ||| | || ||||||| |||||||| ||||||    
T  11695492 ggtttgatttggttcggttgacttttaaaataaaatccgaaccaaac--aactattgcggtttgaattggatcggttggtg 11695570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 581
Target Start/End: Original strand, 16578577 - 16578707
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||||||||||||| ||||||||||||||| |||  ||  ||| | |||||| ||| || |||        ||||||||||||||||||||| |||| ||    
T  16578577 ctaggggtgttcgcgatgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcgattgattt 16578676  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||    |||||||||||||||||||||    
T  16578677 ttaaaaagtcatccaaaccaaaccaaaccaa 16578707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 697
Target Start/End: Original strand, 12884667 - 12884714
Alignment:
Q  650 aaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattc 697  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  12884667 aaaaacgtaaaacacaacatattttcagcaatgttttaaatttcattc 12884714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 6946525 - 6946491
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    |||||||||||||||||||||||||||||||||||    
T  6946525 cgagacaatacaattttttgtttccaacattaaaa 6946491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 9811403 - 9811457
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  9811403 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 9811457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 590
Target Start/End: Complemental strand, 20985949 - 20985903
Alignment:
Q  544 ttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  20985949 ttgacttttaaaataaaatccaaaccaaaccaaactaatgcggtttg 20985903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 12841563 - 12841612
Alignment:
Q  532 ggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||| |||||| |||||||||||||||| |||| |||||||||||    
T  12841563 ggtttggtttggttgaattttaaaatacaatccgaaccgaaccaaaccaa 12841612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 573
Target Start/End: Complemental strand, 25298388 - 25298270
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||||||  ||| |||||||||| |||||||  |||||||||||  |||||| ||||       ||| ||||| |||||||||||||||| ||||||    
T  25298388 gggtgttcgcggtgcagtttggttcggttttgagcataaaagtcatcgaaactgcgagataaaaaaacattcggttcggtttggttcggttgatttttaa 25298289  T
Q  555 aatacaatccaaaccaaac 573  Q
    ||    |||||||||||||    
T  25298288 aaagtcatccaaaccaaac 25298270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 576
Target Start/End: Original strand, 36075372 - 36075466
Alignment:
Q  482 ttttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||| |||||||| ||| |||       |||| ||||||||||| ||| ||| |||||||||||| || ||||| ||||||||    
T  36075372 ttttgaggttaaaagttatccgaaccgcaggataaaaaagcatgtggtttggtttgattcagttcacttttaaaatataaaccaaatcaaaccaa 36075466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 704
Target Start/End: Complemental strand, 6946485 - 6946429
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacatta 704  Q
    |||||||||||||||||||| ||||| ||||||||||||  ||||||| | ||||||    
T  6946485 ttaaaaaggtaaaacacaacttatttccaacaatgttttatatttcatccaacatta 6946429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 679 - 715
Target Start/End: Complemental strand, 36500528 - 36500492
Alignment:
Q  679 aatgtttttaatttcattccacattacattctcattt 715  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36500528 aatgtttttaatttcattccacattacattttcattt 36500492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 556
Target Start/End: Complemental strand, 17916991 - 17916887
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||| ||||||||  |||||||  ||||||| |||| ||||   ||||       |||||||||||||||||||||||||| |||    
T  17916991 taggggtgttcgcggtgcgatttggttcagttttgagcataaaagttatccaaactttgagataaaaaaacatgcggtttggtttggttcggttgatttt 17916892  T
Q  552 taaaa 556  Q
    |||||    
T  17916891 taaaa 17916887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 514
Target Start/End: Original strand, 43452100 - 43452159
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    ||||||||||| ||  ||||||||||||||||| | ||||| |||||||||||| |||||    
T  43452100 gggtgttcgcagtgtagtttggttcgattttgaaggtaaaaatcatccgaactgtaagat 43452159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 11375914 - 11375968
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||| |||||||||||||||||||| ||||||||    ||||||||||||||||    
T  11375914 catgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 11375968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 648 - 715
Target Start/End: Complemental strand, 31720013 - 31719938
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaa--------tgtttttaatttcattccacattacattctcattt 715  Q
    |||||||||||||||| ||||||||||| ||||        ||||| |||||||||||||||||||||| ||||||    
T  31720013 ttaaaaaggtaaaacaaaacatattttcgacaaggtttcaatgtttctaatttcattccacattacattttcattt 31719938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 653
Target Start/End: Complemental strand, 31720049 - 31720019
Alignment:
Q  623 acaatacaattttttgtttccaacattaaaa 653  Q
    |||||||||||||||||||||||||||||||    
T  31720049 acaatacaattttttgtttccaacattaaaa 31720019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 467 - 610
Target Start/End: Complemental strand, 55467767 - 55467624
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| ||||| |    
T  55467767 tgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttgacttttaaaataaaatccga 55467668  T
Q  567 accaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||| |||||||||| ||||||  |||||||  |||||||||    
T  55467667 accaaatcaaaccaatgcggtttggattggatcagttggtgcgg 55467624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 455 - 653
Target Start/End: Complemental strand, 42363362 - 42363162
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||||||| |||||||||||||| |||||||| ||||||| ||  |||| |||||||       |||||||||||||||||||||||||||||| ||    
T  42363362 gggtgttcgcagtgcggtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaatcatgcggtttggtttggttcggttgactttaaa 42363263  T
Q  555 aatacaatccaaaccaaacca----aaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacatta 650  Q
    || | ||||| ||||||||||    |||||||| ||||||  ||||||||||| ||||||        |||||| ||| |||||||||||||||||||||    
T  42363262 aacaaaatccgaaccaaaccaaatcaaccaatgcggtttggtttggatcgattagtgcgg--atttttcgagacgatataattttttgtttccaacatta 42363165  T
Q  651 aaa 653  Q
    |||    
T  42363164 aaa 42363162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 456 - 610
Target Start/End: Complemental strand, 17144865 - 17144707
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||| ||| |||||||        |||||| ||||||||||||||||||||||||||    
T  17144865 ggtgttcgcagtgcggtttggttcggttttgaggctaaaagtcatccaaaccgcaagataaaaagt-atgcggattggtttggttcggttgacttttaaa 17144767  T
Q  556 atacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||| ||||     |||||||| |||||||||||||||||| ||||||||| ||| |||||    
T  17144766 atagaatccgaagcaaaccaagccaaaccaatgtggtttgggttggatcggttgatgcgg 17144707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 471 - 581
Target Start/End: Original strand, 54121982 - 54122092
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    ||||| |||||||||||||||||||||||||||||| | |||||        |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  54121982 gtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggtttggttcggttgacttttaaaataaaatccgaacca 54122081  T
Q  571 aaccaaaccaa 581  Q
    |||||||||||    
T  54122082 aaccaaaccaa 54122092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 453 - 610
Target Start/End: Complemental strand, 10481784 - 10481622
Alignment:
Q  453 aggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttt 552  Q
    |||||||||| |  ||| |||||||||| |||||||| ||||||||||  ||||  ||||||       || || |||||||||||||||||||||||||    
T  10481784 aggggtgttcacggtgcagtttggttcggttttgaggataaaagtcattggaaccacaagataaaaagacacgcagtttggtttggttcggttgactttt 10481685  T
Q  553 aaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||| |||      ||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  10481684 aaaataaaatttgaatcaaaccaaatcaaaccaatgtggtttgagttggatcggttgatgcgg 10481622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 610
Target Start/End: Original strand, 20846418 - 20846576
Alignment:
Q  458 tgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnn--catgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||||  ||| |||||||||| ||| |||  |||||||||||||||| |||||||         |||||| |||||||||||||||||||||||||||    
T  20846418 tgttcgcggtgcagtttggttcggtttcgagagtaaaagtcatccgaaccgcaagataaaaaaatacatgcgctttggtttggttcggttgacttttaaa 20846517  T
Q  556 atacaatcca----aaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||| ||||||    ||||||| |||||||||| |||||| ||||||||| |||||||||    
T  20846518 ataaaatccaaaccaaccaaatcaaaccaatgcggtttgggttggatcggttggtgcgg 20846576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 452 - 653
Target Start/End: Complemental strand, 2832539 - 2832330
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgc-----ggtttggtttggttcggttg 546  Q
    ||||| |||||||  || ||||||||| | |||||||| ||||||||||||||||  ||||||       |||||     ||||||||||||||||||||    
T  2832539 tagggttgttcgcggtgtggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaagcatgcggtttggtttggtttggttcggttg 2832440  T
Q  547 acttttaaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgttt 641  Q
    |||||||||||| ||||     ||||||||| |||||||||| |||||| ||| ||||| |||||||||         |||||||||||||||| |||||    
T  2832439 acttttaaaataaaatccgaatcaaaccaaatcaaaccaatgcggtttgggtttgatcggttggtgcgggtttttt--gagacaatacaattttatgttt 2832342  T
Q  642 ccaacattaaaa 653  Q
     |||||||||||    
T  2832341 tcaacattaaaa 2832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 445 - 576
Target Start/End: Complemental strand, 6004534 - 6004403
Alignment:
Q  445 ttttacctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggt 544  Q
    ||||| ||||||||||| || ||||||||||||||| |||| ||  |||||||||||| ||| || ||||       |||||||||||||||||||||||    
T  6004534 ttttaactaggggtgtttgcgatgcggtttggttcggttttcagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggt 6004435  T
Q  545 tgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||| ||||||||    ||||||||||||||||    
T  6004434 tgatttttaaaaagtcatccaaaccaaaccaa 6004403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 469 - 715
Target Start/End: Original strand, 52631997 - 52632248
Alignment:
Q  469 cggtttggttcgattttgaggttaaaagtcatccgaactg-caagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaa 567  Q
    |||||||||||| |||| ||| |||||||||||| ||| | ||||||       || ||||||||||||| ||||||| |||||||||||||||||| ||    
T  52631997 cggtttggttcgtttttaaggctaaaagtcatccaaacagacaagataaaaaaacacgcggtttggtttgattcggttaacttttaaaatacaatccgaa 52632096  T
Q  568 ccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa-----------agg 656  Q
    |||||||||  ||     ||||| ||||||| | |||||||||        | |||||| | ||||||||||||||||||||||||           | |    
T  52632097 ccaaaccaatgca-----gtttgggttggattggttggtgcggtttttt--caagacaacataattttttgtttccaacattaaaatcgagttaaaaatg 52632189  T
Q  657 taaaacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    |||| ||||||||||||| | |||||||||||||||||||||| |||||||| ||||||    
T  52632190 taaagcacaacatatttttagcaatgtttttaatttcattccaaattacattttcattt 52632248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 581
Target Start/End: Complemental strand, 8558082 - 8557969
Alignment:
Q  468 gcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaa 567  Q
    ||||||||||| | |||||||| ||||||||| ||||||||||||||       | |||||||||||| |||| | |||||||| |||||| ||||| ||    
T  8558082 gcggtttggtttggttttgagggtaaaagtcacccgaactgcaagataaaaaagcttgcggtttggttcggtttgattgactttaaaaataaaatccgaa 8557983  T
Q  568 ccaaaccaaaccaa 581  Q
    ||||||||||||||    
T  8557982 ccaaaccaaaccaa 8557969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 528 - 653
Target Start/End: Original strand, 37045328 - 37045451
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaat 627  Q
    ||||||||||||||||||| |||| |||||| ||||| ||||||||||||||||| ||||||| |||| |||| |||||||||        || ||| ||    
T  37045328 gtttggtttggttcggttggcttt-aaaataaaatccgaaccaaaccaaaccaatatggtttgggttgtatcggttggtgcgg-tttttttcgtgacgat 37045425  T
Q  628 acaattttttgtttccaacattaaaa 653  Q
    || |||||||||||||||||||||||    
T  37045426 acgattttttgtttccaacattaaaa 37045451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 610
Target Start/End: Complemental strand, 45915272 - 45915191
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||||||||||||||||||||||||||||      ||||||||||||| ||||||| ||||||| |||||||| |||||||||    
T  45915272 atgcggtttggtttggttcggttgacttttaaaa------ccaaaccaaaccagaccaatgcggtttgaattggatcggttggtgcgg 45915191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 466 - 590
Target Start/End: Original strand, 51191661 - 51191785
Alignment:
Q  466 atgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatcca 565  Q
    |||||||||||||| ||||||||||||||||| ||  |||| |||||||        ||||||||||||||||||||||||  |||||||||  || ||     
T  51191661 atgcggtttggttctattttgaggttaaaagttattagaaccgcaagataaaaaaatatgcggtttggtttggttcggttggattttaaaatgaaaaccg 51191760  T
Q  566 aaccaaaccaaaccaatgtggtttg 590  Q
    |||||||||||||| ||| ||||||    
T  51191761 aaccaaaccaaaccgatgcggtttg 51191785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 610
Target Start/End: Original strand, 26758186 - 26758329
Alignment:
Q  472 tttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaa 571  Q
    ||||||||| |||| |||||||||||||||||||| |||||||        || ||||||||||||||||||||||||||||||||| | ||  | ||||    
T  26758186 tttggttcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatacggtttggtttggttcggttgacttttaaaataaagtctgatccaa 26758285  T
Q  572 acc-----aaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||     ||||||||| |||||| |||| |||| |||||||||    
T  26758286 accaaactaaaccaatgcggtttgggttgtatcggttggtgcgg 26758329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 531 - 695
Target Start/End: Original strand, 25465821 - 25465996
Alignment:
Q  531 tggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaataca 630  Q
    |||||||||| | ||||||||||||||| ||||| |||||||||||||||||  | |||| |||||| || || ||| |         | ||||||||||    
T  25465821 tggtttggtttgattgacttttaaaataaaatccgaaccaaaccaaaccaatacgatttgggttggaccggttagtgtgattttttttcaagacaataca 25465920  T
Q  631 attttttgtttccaacatta----------aaaagg-taaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||||| ||||||||          |||||| |||||||||||||||||||||||||||||| ||||||||    
T  25465921 attttttgttttcaacattaaaatcaagttaaaaggctaaaacacaacatattttcaacaatgttttaaatttcat 25465996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 577
Target Start/End: Complemental strand, 26292096 - 26291971
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||||||||||||||||||| |  |||||| |||||| ||| |||||||         ||||||||| |||||||||||||| |||    
T  26292096 taggggtgttcgcggtgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattgtgcggtttgctttggttcggttgatttt 26291997  T
Q  552 taaaatacaatccaaaccaaaccaaa 577  Q
    ||||||| ||||  ||||||||||||    
T  26291996 taaaatagaatctgaaccaaaccaaa 26291971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 522 - 590
Target Start/End: Complemental strand, 35402275 - 35402207
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||||||||| ||||||    
T  35402275 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaatgcggtttg 35402207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 573
Target Start/End: Complemental strand, 38652128 - 38652008
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||| |||||  |||||||||||| | |||||| | |||||||||||||||  |||||||        |||||||||||||||||||||||||||||    
T  38652128 taggggtattcgcggtgcggtttggtttggttttgaaggtaaaagtcatccgaatcgcaagataaaaaat-atgcggtttggtttggttcggttgacttt 38652030  T
Q  552 taaaatacaatccaaaccaaac 573  Q
     ||||||  |||||||||||||    
T  38652029 aaaaataatatccaaaccaaac 38652008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 50579065 - 50578986
Alignment:
Q  529 tttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcg 609  Q
    ||||||||| ||||||||||||| |||||| ||||| ||| ||||||||||||||||||||| ||||||| | ||||||||    
T  50579065 tttggtttgcttcggttgactttaaaaataaaatccgaac-aaaccaaaccaatgtggtttgggttggattggttggtgcg 50578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 600
Target Start/End: Original strand, 27054017 - 27054165
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||| |||  ||| ||||  |||| |||||||||||||||| || |||| ||||||||        ||||  |||||||||||| |||||| |||    
T  27054017 taggggtgtgcgcggtgcagtttatttcggttttgaggttaaaagttattcgaattgcaagataaataagtatgcattttggtttggtttggttgaattt 27054116  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
    ||||||| ||| |||||||||||||||||||| | ||||  ||||||||    
T  27054117 taaaataaaattcaaaccaaaccaaaccaatgcgatttggattggatcg 27054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 40483865 - 40483985
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||||   ||||||||| ||||||||| | ||||||| |||| |||||  ||||||       |||||||||||||||||||| |||||||||    
T  40483865 taggggtgttcgttgtgcggtttgattcgattttaaagttaaaaatcattcgaaccacaagataaaaatgcatgcggtttggtttggttcagttgacttt 40483964  T
Q  552 taaaatacaatccaaaccaaa 572  Q
    ||||||| ||  |||||||||    
T  40483965 taaaataaaaatcaaaccaaa 40483985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 470 - 610
Target Start/End: Original strand, 45629153 - 45629293
Alignment:
Q  470 ggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacc 569  Q
    |||||| |||| |||| |||||||||||||||||||| |||||||        ||||  ||||||||| || ||||||||||||||||| | ||| ||||    
T  45629153 ggtttgattcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatgcaatttggtttgatttggttgacttttaaaataaactccgaacc 45629252  T
Q  570 aaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||| |||||||||  ||||||  || ||| |||||||||||    
T  45629253 aaatcaaaccaatacggtttggattagattgattggtgcgg 45629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 44650976 - 44651035
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||| ||||    
T  44650976 catgcggtttggtttggtttggttgactttaaaaataaaatccgaaccaaaccaatccaa 44651035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 610
Target Start/End: Complemental strand, 2566455 - 2566312
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||| |||||||||||||||| | ||||||||||| ||||  ||||||        ||| ||||||||| |||||| || | |||||||||| |||   |    
T  2566455 tgcgctttggttcgattttgatgctaaaagtcatctgaaccacaagataaagaaatatgtggtttggttcggttcgattaagttttaaaataaaatttga 2566356  T
Q  567 accaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||| ||| ||||||||||||  |||||||| |||||||||    
T  2566355 accaaacaaaatcaatgtggtttggattggatcggttggtgcgg 2566312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 4554705 - 4554791
Alignment:
Q  529 tttggtttggttcggttgacttt-----taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||||||||||||||||||||     ||| || ||| |||||||||||||||| |||| |||||||||||||||| ||| |||||    
T  4554705 tttggtttggttcggttgactttaaaagtaacatccaaaccaaaccaaaccaaactaatgcggtttgagttggatcggttgatgcgg 4554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 524 - 581
Target Start/End: Original strand, 33360968 - 33361025
Alignment:
Q  524 tgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  33360968 tgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 33361025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 4669717 - 4669658
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||| ||||||||||||||||    
T  4669717 catgcggtttggtttggttcggttgatttttaaaaagtcatccgaaccaaaccaaaccaa 4669658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 647 - 694
Target Start/End: Original strand, 26758371 - 26758418
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttca 694  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  26758371 attaaaaagctaaaacacaacatattttcagcaatgttttaaatttca 26758418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 647 - 706
Target Start/End: Original strand, 45629336 - 45629395
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||||||||||| |||||||||||| |||| |||| |||||||| | ||||||||    
T  45629336 attaaaaaggtaaaacataacatattttcagcaatattttaaatttcatacaacattaca 45629395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 4280296 - 4280346
Alignment:
Q  526 cggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| |||||||    
T  4280296 cggtttggtttggctcggttgacttttaaaataaaattcaaacaaaaccaa 4280346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 653
Target Start/End: Complemental strand, 5681526 - 5681441
Alignment:
Q  566 aaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||||| |||||||| |||||| ||||||||| | |||||||        ||||| |||||||||||||||||||||||||||||    
T  5681526 aaccaaacctaaccaatgcggtttgggttggatcggtcggtgcggtttttt--cgagagaatacaattttttgtttccaacattaaaa 5681441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 51149727 - 51149673
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  51149727 catgcggtttggtttggttcggttgatttttaaaaagtgatccaaaccaaaccaa 51149673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 695
Target Start/End: Complemental strand, 2566269 - 2566224
Alignment:
Q  650 aaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||    
T  2566269 aaaaagctaaaacacaacatattttcaaccatgttttaaatttcat 2566224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 581
Target Start/End: Original strand, 10369153 - 10369283
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  |||||||||||||| |||  ||  ||| | |||||| |||||| |||        |||||||||||||| |||||| |||| ||    
T  10369153 ctaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaactgcgagagaaaaaaacatgcggtttggttcggttcgtttgattt 10369252  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||    |||||||||||||||||||||    
T  10369253 ttaaaaagtcatccaaaccaaaccaaaccaa 10369283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 576
Target Start/End: Complemental strand, 21586981 - 21586859
Alignment:
Q  454 ggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttta 553  Q
    ||||||||| |  ||| |||||||||| ||||||| ||||||||||||| ||| || ||||       ||||| |||||||||| ||| ||||| |||||    
T  21586981 ggggtgttcacggtgcagtttggttcggttttgagcttaaaagtcatccaaaccgcgagataaaaaagcatgcagtttggtttgattcagttgattttta 21586882  T
Q  554 aaatacaatccaaaccaaaccaa 576  Q
    |||    ||||||||||||||||    
T  21586881 aaaagtcatccaaaccaaaccaa 21586859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 692
Target Start/End: Complemental strand, 22257436 - 22257391
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaattt 692  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||    
T  22257436 attaaaaagctaaaacgcaacatattttcagcaatgtttttaattt 22257391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 576
Target Start/End: Complemental strand, 22257617 - 22257515
Alignment:
Q  474 tggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaac 573  Q
    ||||||| |||||||  |||||||||||||||| || ||||        |||||||||| ||| |||| ||||||||||||||||  |||| ||||||||    
T  22257617 tggttcggttttgagactaaaagtcatccgaaccgcgagataaataagtatgcggtttgatttagttcagttgacttttaaaataatatccgaaccaaac 22257518  T
Q  574 caa 576  Q
    |||    
T  22257517 caa 22257515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 572
Target Start/End: Original strand, 55129746 - 55129791
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaa 572  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||    
T  55129746 ggtttggtttggttcggttgactttgaaaatacaaaccgaaccaaa 55129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 594
Target Start/End: Original strand, 38680818 - 38680890
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagtt 594  Q
    |||| ||||||||| ||||  |||||||||||||||| |||   |||||||||||||||||  ||||||||||    
T  38680818 catgaggtttggttcggttaagttgacttttaaaataaaatttgaaccaaaccaaaccaattcggtttgagtt 38680890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 581
Target Start/End: Original strand, 43030359 - 43030488
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||||||||| ||   |||||||  |||||||||| ||||  |||||||        |||| |||||||||||||||||||| |||    
T  43030359 taggggtgttcgcggtgcggtttgatttagttttgagcataaaagtcatgcgaatcgcaagataaaaaagtatgcagtttggtttggttcggttgatttt 43030458  T
Q  552 taaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||    |||||||| ||||||||||||    
T  43030459 taaaaagtcatccaaactaaaccaaaccaa 43030488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 694
Target Start/End: Complemental strand, 25919192 - 25919145
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttca 694  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  25919192 attaaaaagctaaaacacaacatattttcactaatgttttaaatttca 25919145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 706
Target Start/End: Complemental strand, 45915146 - 45915087
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||||||||  ||||  ||||||||||||||||||||||| |||||||| | ||||||||    
T  45915146 attaaaaagccaaaattcaacatattttcaacaatgttttaaatttcatccaacattaca 45915087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 576
Target Start/End: Complemental strand, 46253491 - 46253448
Alignment:
Q  533 gtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||| ||||||||||| | |||||||||||||||    
T  46253491 gtttggttcggttggcttttaaaataaattccaaaccaaaccaa 46253448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 5640703 - 5640669
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||| |||||||||||||||||||||||||||||    
T  5640703 cgagagaatacaattttttgtttccaacattaaaa 5640669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 5671978 - 5671944
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||| |||||||||||||||||||||||||||||    
T  5671978 cgagagaatacaattttttgtttccaacattaaaa 5671944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 34794607 - 34794661
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||| ||||||||||||||||||| ||||||||    ||||||||||||||||    
T  34794607 catgcgatttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 34794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 648 - 686
Target Start/End: Original strand, 38680955 - 38680993
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttt 686  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  38680955 ttaaaaagttaaaacacaacatatttccaacaatgtttt 38680993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 599
Target Start/End: Original strand, 45699636 - 45699706
Alignment:
Q  529 tttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatc 599  Q
    |||||||| ||||| ||||||||||||||| |||   || ||||| | |||||||||||||| ||||||||    
T  45699636 tttggttttgttcgattgacttttaaaataaaatttgaatcaaacaagaccaatgtggtttgggttggatc 45699706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 706
Target Start/End: Original strand, 4280437 - 4280486
Alignment:
Q  657 taaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||||||| ||||||||||| ||||||||| |||||||| | ||||||||    
T  4280437 taaaacactacatattttcagcaatgttttaaatttcatccaacattaca 4280486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 452 - 652
Target Start/End: Complemental strand, 36203583 - 36203378
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||| ||||||||| ||||||||||||||||||||| ||| |||||||       ||||||||||| ||||||||||||||||||    
T  36203583 taggggtgttcgcggtgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagataaaaaagcatgcggtttgatttggttcggttgacttt 36203484  T
Q  552 taaaatacaatccaaaccaaaccaaacc-----aatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaac 646  Q
    ||||||||||||| |||| |||||||||     |||| |||||| ||||||| | ||||||| |        |||||||||  |||||||||||||||||    
T  36203483 taaaatacaatccgaaccgaaccaaaccaaactaatgcggtttgggttggattggttggtgcagttttttttcgagacaatggaattttttgtttccaac 36203384  T
Q  647 attaaa 652  Q
    ||||||    
T  36203383 attaaa 36203378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 696
Target Start/End: Complemental strand, 32910488 - 32910255
Alignment:
Q  473 ttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaa 572  Q
    |||||||| |||||||| |||||||||||| |||||||||||       ||||| |||||||||||||||||||||||| |||||| ||||  |||||||    
T  32910488 ttggttcggttttgaggataaaagtcatccaaactgcaagataaaaaaacatgcagtttggtttggttcggttgactttaaaaatagaatctgaaccaaa 32910389  T
Q  573 ccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaaca-----------ttaaaaaggtaaaa 661  Q
     ||||| |||| |||||| ||||||||| ||||||  |        |||||| ||||||||||||||||||||||           |||||||| | |||    
T  32910388 acaaacaaatgcggtttgtgttggatcggttggtg-tgatttttttcgagacgatacaattttttgtttccaacattaaaatcaagttaaaaagtttaaa 32910290  T
Q  662 cacaacatattttcaacaatgtttttaatttcatt 696  Q
    ||||||||||||||||||||||||| |||||||||    
T  32910289 cacaacatattttcaacaatgttttaaatttcatt 32910255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 40095561 - 40095398
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||||||| |||||||||||||||| |||||||| |||||||        ||||||||||| ||| ||||||| | |||    
T  40095561 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagataaataaatatgcggtttggcttgtttcggtttatttt 40095462  T
Q  552 taaaata-----caatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||||     ||| ||||||||||||||||||||||||||||  |||||||| |||||||||    
T  40095461 taaaataaaactcaaaccaaaccaaaccaaaccaatgtggtttggattggatcggttggtgcgg 40095398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 610
Target Start/End: Original strand, 12973494 - 12973665
Alignment:
Q  444 cttttacctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcgg 543  Q
    ||||||| |||||||||||||  |||||||||||||| |||||| | | |||||||||||||| |||||||        |||||||||||||||||| ||    
T  12973494 cttttacttaggggtgttcgcggtgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaatatgcggtttggtttggtttgg 12973593  T
Q  544 ttgacttttaaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||| ||| |||||| ||||     ||||||||||||||| |||||||||||  |||||||| |||||||||    
T  12973594 ttgattttgaaaataaaatccgaatcaaaccaaaccaaactaatgtggtttggattggatcggttggtgcgg 12973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 50471169 - 50471306
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||| ||||| || |||||||||||| | |||||||||||||||| | || ||        ||||||||||||||||||| ||||  |||    
T  50471169 taggggtgttcgcagtgcgggtttgttcgattttgatgctaaaagtcatccgaaccgtaaaataaaaaagtatgcggtttggtttggttcagttgcattt 50471268  T
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggttt 589  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  50471269 taaaataaaatccaaaccaaaccaaaccaatgcggttt 50471306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 715
Target Start/End: Original strand, 17651694 - 17651968
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| || |||||||||| |||| |||||||| |||||||||| |||| || ||| |       ||||||||||| ||| ||||||||||||||    
T  17651694 taggggtgtttgcgatgcggtttgattcggttttgaggctaaaagtcattcgaattgtaaggtaaaaaagcatgcggtttgattttgttcggttgacttt 17651793  T
Q  552 taaaatacaatcc-----aaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaac 646  Q
    ||||||| |||||      |||||||||||||||||| ||||||  |||||| | ||| |||||         || ||||||||||||||||||||||||    
T  17651794 taaaataaaatccgaactgaaccaaaccaaaccaatgcggtttggtttggattggttgatgcggttttttt--gaaacaatacaattttttgtttccaac 17651891  T
Q  647 attaaaa---aggtaa------aacacaacatattttcaacaatgtttttaatttcattccacattacattctcattt 715  Q
    |||||||   || |||      ||||| |||||||| |||||||||||||||||| ||||||||||||| | ||||||    
T  17651892 attaaaatcgagttaaaaaggtaacacgacatatttccaacaatgtttttaattt-attccacattacaatttcattt 17651968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 25560136 - 25559977
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||||| ||||| | |||||        |||||||||||   |||||||||||||||    
T  25560136 taggggtgttcgcggtgcgttttggttcgattttgaggttaaaagtcattcgaaccgtaagataaaaaagtatgcggtttgg---ggttcggttgacttt 25560040  T
Q  552 taaaata----caatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    |||||||    | | ||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  25560039 taaaataaatccgaaccaaaccaaacaaaaccaatgcggtttgaattggatcggttggtgcgg 25559977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 21685682 - 21685553
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  ||| |||||||||| |||| ||| ||||||||||| |||| |||||||       |||||||||||||||||||| |||||||||    
T  21685682 taggggtgtttgcggtgcagtttggttcggttttaaggctaaaagtcatctgaaccgcaagatacaaatgcatgcggtttggtttggttcagttgacttt 21685583  T
Q  552 taaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||| ||||  ||||||||||||||||    
T  21685582 taaaataaaatcagaaccaaaccaaaccaa 21685553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 457 - 600
Target Start/End: Complemental strand, 9962282 - 9962139
Alignment:
Q  457 gtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaa 556  Q
    ||||||||  |||||||||||||  ||||||   |||||||||||||||  |||||||       || ||||||| ||||| || ||||||||||| |||    
T  9962282 gtgttcgcggtgcggtttggttcagttttgaaactaaaagtcatccgaatcgcaagataaaaaaacaggcggttttgtttgatttggttgacttttcaaa 9962183  T
Q  557 tacaatccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
    || ||| ||||||||||||||||||||||||||| |||||||||    
T  9962182 taaaattcaaaccaaaccaaaccaatgtggtttgggttggatcg 9962139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 16529640 - 16529477
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||||||| |||||||  |||||||||||| |||||| ||||       ||||| |||||||||||||||||||| |||    
T  16529640 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgccgtttggtttggttcggttgatttt 16529541  T
Q  552 taaa-----atacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||     || ||| ||||||||||||||||||||| || |||| |||| ||| || ||||||    
T  16529540 taaaaagtcattcaaaccaaaccaaaccaaaccaatgcggcttgaattggttcggtttgtgcgg 16529477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 571
Target Start/End: Complemental strand, 35980527 - 35980408
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  |||||||||||||| |||||||| |||||||||||||||| ||||| |       |||| |||||||||| ||||| ||||||||    
T  35980527 taggggtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgttcgattgacttt 35980428  T
Q  552 taaaatacaatccaaaccaa 571  Q
    ||||||| ||||||||||||    
T  35980427 taaaataaaatccaaaccaa 35980408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 455 - 576
Target Start/End: Complemental strand, 27507628 - 27507507
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||||||  |||||||||||||| |||||||  |||||||||||||||| |||||||        ||||  |||||||| |||||||||||||||||    
T  27507628 gggtgttcgcggtgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagtatgcaatttggtttagttcggttgacttttaa 27507529  T
Q  555 aatacaatccaaaccaaaccaa 576  Q
    |||| |||||||| ||||||||    
T  27507528 aataaaatccaaatcaaaccaa 27507507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 467 - 696
Target Start/End: Original strand, 17989005 - 17989248
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||||||||||||| |||||||| ||||||||||| |||  |||||||       ||| ||||||| ||||||||||||||||||||||||| ||||| |    
T  17989005 tgcggtttggttcggttttgaggctaaaagtcatctgaatcgcaagataaaaac-catacggtttgatttggttcggttgacttttaaaataaaatccga 17989103  T
Q  567 accaa-----accaaaccaatgtggttt-gagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaa--------- 651  Q
    |||||     |||||| ||||| ||||| | ||||||||  ||||||||         |||||||||| || ||||||||| |||||||||             
T  17989104 accaacctaaaccaaatcaatgcggttttgggttggatctgttggtgcg--tttttttcgagacaatagaaatttttgttttcaacattaaaatggagtt 17989201  T
Q  652 --aaaggtaaaacacaacatattttcaacaatgtttttaatttcatt 696  Q
      |||||||||||||||||||||||||||||||||| ||||||||||    
T  17989202 aaaaaggtaaaacacaacatattttcaacaatgtttataatttcatt 17989248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 576
Target Start/End: Complemental strand, 2490149 - 2490044
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||        ||||| ||||||||||||| |||||||||||||||| ||| | |||||    
T  2490149 gtttggttcgattttgaggctaaaagttatccgaaccgcaagataaataagtatgcgatttggtttggttcagttgacttttaaaataaaattcgaacca 2490050  T
Q  571 aaccaa 576  Q
    ||||||    
T  2490049 aaccaa 2490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 11074538 - 11074410
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  |||||||||||||||||| |||| |||||||| |||||||   |||||       ||| ||||||||||||||||||||||||||    
T  11074538 taggggtgttcgcggtgcggtttggttcgattt-gagggtaaaagtcttccgaaccttaagataaaaaaacatacggtttggtttggttcggttgacttt 11074440  T
Q  552 taaaatacaatccaaaccaaaccaaaccaa 581  Q
     |||||| ||||  |||| |||||||||||    
T  11074439 aaaaataaaatctgaacctaaccaaaccaa 11074410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 581
Target Start/End: Complemental strand, 8165692 - 8165562
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||| ||  |||||||| ||||  |||||| | ||||| |||||||||| ||| |||       |||||||||||||| ||||||||||||||    
T  8165692 ctaggggtgtttgcggtgcggtttagttcagttttgaaggtaaaaatcatccgaaccgcaggataaagaagcatgcggtttggttcggttcggttgactt 8165593  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    | |||||| ||||  ||||||||||||||||    
T  8165592 taaaaataaaatctgaaccaaaccaaaccaa 8165562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 582
Target Start/End: Complemental strand, 39256776 - 39256646
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||||   |||||||||||||  |||||||   ||||||||| |||||||| ||||       |||||||||| ||||||||||||||| |||    
T  39256776 taggggtgttcgtggtgcggtttggttctgttttgagcacaaaagtcattcgaactgcgagataaaaaagcatgcggtttagtttggttcggttgatttt 39256677  T
Q  552 taaaatacaatccaaaccaaaccaaaccaat 582  Q
    |||||    ||||||||||||||||||||||    
T  39256676 taaaaagtcatccaaaccaaaccaaaccaat 39256646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 558
Target Start/End: Complemental strand, 52380862 - 52380756
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||||| ||| |||||||| || | |||||| ||||||||||  ||||||||||||        |||||||||||||| ||||||||||||||    
T  52380862 taggggtgttcgcgatgtggtttggtacggtattgaggctaaaagtcatatgaactgcaagatatataactatgcggtttggtttagttcggttgacttt 52380763  T
Q  552 taaaata 558  Q
    |||||||    
T  52380762 taaaata 52380756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 552 - 653
Target Start/End: Complemental strand, 35992641 - 35992541
Alignment:
Q  552 taaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaa 651  Q
    |||||| |||||||||||||||||||| |||| ||||||  |||||||| |||||||||        |||||||||||||||||||| ||||||||||||    
T  35992641 taaaatccaatccaaaccaaaccaaactaatgcggtttggtttggatcggttggtgcgg-tttttttcgagacaatacaattttttgcttccaacattaa 35992543  T
Q  652 aa 653  Q
    ||    
T  35992542 aa 35992541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 556
Target Start/End: Complemental strand, 51252556 - 51252451
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  ||||||||||||||||||||||  |||||||||||| ||| || ||||       |||| |||||||||||||| |||||| ||    
T  51252556 ctaggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttgggttgattt 51252457  T
Q  551 ttaaaa 556  Q
    ||||||    
T  51252456 ttaaaa 51252451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 16537957 - 16537853
Alignment:
Q  472 tttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaa 571  Q
    |||||||||||||||| | |||||||||||  ||| |||||||       ||||||||||| ||||||| |||| |||||||||||| ||||| ||||||    
T  16537957 tttggttcgattttgaaggtaaaagtcatctaaaccgcaagataaaaaaacatgcggtttgatttggtttggttcacttttaaaataaaatccgaaccaa 16537858  T
Q  572 accaa 576  Q
    |||||    
T  16537857 accaa 16537853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 647 - 706
Target Start/End: Complemental strand, 40095351 - 40095292
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  40095351 attaaaaagctaaaacgcaacatattttcaacaatgttttaaatttcattcaacattaca 40095292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 577
Target Start/End: Original strand, 50153376 - 50153476
Alignment:
Q  477 ttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||| |||||||||||||||| ||| ||||||||||||        ||| |||||| ||| ||||||||||||||||||||| ||||| |||||||||||    
T  50153376 ttcggttttgaggttaaaagttatctgaactgcaagataaaaaaatatgtggtttgattttgttcggttgacttttaaaataaaatccgaaccaaaccaa 50153475  T
Q  577 a 577  Q
    |    
T  50153476 a 50153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 26345198 - 26345035
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||| |||||  |||||||| ||||  ||||||||||| |||||||||||||   || ||        ||||||||| ||||| |||||||||||||    
T  26345198 taggggtattcgcggtgcggtttagttccgttttgaggttagaagtcatccgaaccaaaaaataaaaaagtatgcggtttagtttgattcggttgacttt 26345099  T
Q  552 taaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||| |||     |||||| |||||||||||||| ||||||  |||||||| |||||||||    
T  26345098 taaaataaaatccgaaccaaacaaaaccaaaccaatgcggtttggattggatcggttggtgcgg 26345035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 607
Target Start/End: Complemental strand, 39158393 - 39158303
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatc-----caaaccaaaccaaaccaatgtggtttgagttggatcgattggtg 607  Q
    |||||| |||||||| ||||||| | ||||||||||| ||||     ||||||||||||||||||||||||||| |||||||| |||||||    
T  39158393 catgcgttttggtttagttcggtcggcttttaaaataaaatctgaatcaaaccaaaccaaaccaatgtggtttgggttggatcaattggtg 39158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 470 - 576
Target Start/End: Original strand, 52828783 - 52828888
Alignment:
Q  470 ggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacc 569  Q
    ||||||||||| |||| |||||||| |||||| |||| |||||||       ||||| ||||||||||| ||||||||||||||||||| ||||  ||||    
T  52828783 ggtttggttcggttttaaggttaaaggtcatctgaaccgcaagataacaaagcatgctgtttggtttgg-tcggttgacttttaaaataaaatctgaacc 52828881  T
Q  570 aaaccaa 576  Q
    |||||||    
T  52828882 aaaccaa 52828888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 576
Target Start/End: Complemental strand, 1161879 - 1161758
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||| || ||||||||||||||| |||||||   ||||||||||||||| || ||||       |||| |||||||||||||| |||||| ||||||    
T  1161879 gggtgtttgcgatgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagataaaaaagcatgtggtttggtttggtttggttgatttttaa 1161780  T
Q  555 aatacaatccaaaccaaaccaa 576  Q
    ||    ||||||||||||||||    
T  1161779 aaagtcatccaaaccaaaccaa 1161758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 471 - 576
Target Start/End: Original strand, 34914095 - 34914200
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    |||||||||||||||||||| ||||||||||| |||||| | ||        |||| |||||||||| || ||||||||||||||||| ||| | |||||    
T  34914095 gtttggttcgattttgaggtgaaaagtcatccaaactgcgaaataaaaaagtatgcagtttggtttgctttggttgacttttaaaataaaattcgaacca 34914194  T
Q  571 aaccaa 576  Q
    ||||||    
T  34914195 aaccaa 34914200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 8211291 - 8211350
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  8211291 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 8211350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 20493761 - 20493820
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  20493761 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 20493820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 647 - 706
Target Start/End: Complemental strand, 26344988 - 26344929
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  26344988 attaaaaagttaaaacacaacatattttcagcaatgttttaaatttcatccaacattaca 26344929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 32954050 - 32954109
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  32954050 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 32954109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 653
Target Start/End: Complemental strand, 35980387 - 35980218
Alignment:
Q  473 ttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaa 572  Q
    ||||| || |||| ||| |||||||||||||||| ||||| |       |||| |||||||||| ||| ||||||||||||||||| ||||||||||||     
T  35980387 ttggtgcggtttttaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgtttggttgacttttaaaataaaatccaaaccaa- 35980289  T
Q  573 ccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
             |||||||||  || ||||| |||||||||        |||||||||||||||||||||||||||||||||||    
T  35980288 ---------tgtggtttggtttagatcggttggtgcggttttttt-cgagacaatacaattttttgtttccaacattaaaa 35980218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 600
Target Start/End: Original strand, 18309963 - 18310090
Alignment:
Q  473 ttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaa 572  Q
    |||||||  |||| ||| |||||||||||||||| ||| |||       |||| | |||||||||||| |||||| |||||||||| ||  |||||||||    
T  18309963 ttggttcagtttttaggataaaagtcatccgaaccgcatgataaaaaaacatgtgatttggtttggtttggttgaattttaaaataaaactcaaaccaaa 18310062  T
Q  573 ccaaaccaatgtggtttgagttggatcg 600  Q
    |||||| |||| ||||||  ||||||||    
T  18310063 ccaaacaaatgcggtttggtttggatcg 18310090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 558
Target Start/End: Original strand, 44055670 - 44055761
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaata 558  Q
    |||||||| |||| ||||||||| ||||| |||| |||||||||||||       |||||| |||||||| |||||||||||||| ||||||    
T  44055670 tgcggtttagttcaattttgagggtaaaaatcattcgaactgcaagataaaaaaacatgcgatttggtttagttcggttgactttaaaaata 44055761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 572
Target Start/End: Original strand, 3935401 - 3935519
Alignment:
Q  454 ggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttta 553  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||  |||| | |||||        |||| || ||||||| |||||||||||||||    
T  3935401 ggggtgtttgcggtgcggtttggttcgattttgagactaaaagtcatatgaaccgtaagataaataagtatgcagtatggtttgattcggttgactttta 3935500  T
Q  554 aaatacaatccaaaccaaa 572  Q
    ||||| ||||| |||||||    
T  3935501 aaataaaatccgaaccaaa 3935519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 467 - 685
Target Start/End: Complemental strand, 10847647 - 10847429
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||| ||||||| |||||||||||||||||||||| ||||  ||||||       ||||     ||||||||||||||||||||| |||||| ||||  |    
T  10847647 tgcgatttggttagattttgaggttaaaagtcatctgaacctcaagataaaaaaacatg-----tggtttggttcggttgactttgaaaataaaatcaga 10847553  T
Q  567 accaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa-----------ag 655  Q
    ||||||||||     ||||||||| ||||||| | ||| ||| |        | |||||||||||||||||||||||||||||||||           ||    
T  10847552 accaaaccaa-----tgtggtttgggttggattggttgatgcagttttctg-ctagacaatacaattttttgtttccaacattaaaacaaaattaaaaag 10847459  T
Q  656 gtaaaacacaacatattttcaacaatgttt 685  Q
     |||||||||||||||||||||||||||||    
T  10847458 ttaaaacacaacatattttcaacaatgttt 10847429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 590
Target Start/End: Original strand, 45691810 - 45691878
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    |||||||||||||||||||||||||| ||||||||    |||||||| ||||||||| |||| ||||||    
T  45691810 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaactaaaccaaactaatgcggtttg 45691878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 606
Target Start/End: Complemental strand, 47984623 - 47984487
Alignment:
Q  469 cggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaac 568  Q
    |||||||||||| |||||||  |||||||||| | || ||||||||       ||||| ||||| ||||||| |  |||||||||||||| |||   |||    
T  47984623 cggtttggttcggttttgagactaaaagtcattcaaattgcaagataaaaaaacatgcagtttgatttggtttgactgacttttaaaataaaatatgaac 47984524  T
Q  569 caaaccaaaccaatgtggtttgagttggatcgattggt 606  Q
    |||||| ||||||||||||||| |||| ||| ||||||    
T  47984523 caaacc-aaccaatgtggtttgggttgaatcaattggt 47984487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 5155413 - 5155354
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||| ||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  5155413 catgcgatttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 5155354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 555
Target Start/End: Original strand, 8268600 - 8268703
Alignment:
Q  453 aggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat-nnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||| |||  |||||||||||||| |||||||| ||||||||||| |||| |||||||         |||||| ||||||||||| ||||||||||    
T  8268600 aggggtgtacgcggtgcggtttggttcggttttgaggctaaaagtcatctgaaccgcaagataaacaaaatatgcgggttggtttggtttggttgacttt 8268699  T
Q  552 taaa 555  Q
    ||||    
T  8268700 taaa 8268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 581
Target Start/End: Original strand, 24629964 - 24630014
Alignment:
Q  531 tggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||| ||||  ||||||||||||||||    
T  24629964 tggtttggtttggttgacttttaaaataaaatcttaaccaaaccaaaccaa 24630014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 25532714 - 25532776
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    ||||||||||||| |||||||||| |||   ||||||| ||||||||||| ||||||||||||    
T  25532714 taggggtgttcgcgatgcggtttgattcagatttgaggctaaaagtcatctgaactgcaagat 25532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 556
Target Start/End: Complemental strand, 33910925 - 33910818
Alignment:
Q  449 acctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgac 548  Q
    |||||||||| |||||| |||||||||||||   ||||||  |||||||||||| || ||| ||||       |||| |||||| ||||||||||||||     
T  33910925 acctaggggtattcgcagtgcggtttggttcaggtttgagcataaaagtcatccaaaatgcgagataaaaaagcatgtggtttgatttggttcggttgat 33910826  T
Q  549 ttttaaaa 556  Q
    ||||||||    
T  33910825 ttttaaaa 33910818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 582
Target Start/End: Original strand, 44918505 - 44918615
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||||       |||||     |||||||||||||||| ||||||||    ||||||    
T  44918505 tgcggtttggttcgattttgagcataaaagtcacccaaactgcaagataaaaaagcatgc-----ggtttggttcggttgatttttaaaaagtcatccaa 44918599  T
Q  567 accaaaccaaaccaat 582  Q
    || |||||||||||||    
T  44918600 acgaaaccaaaccaat 44918615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 513
Target Start/End: Original strand, 6248019 - 6248080
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaaga 513  Q
    |||||||||||||| ||||||||| || |||||||||  |||||||||||| ||| ||||||    
T  6248019 taggggtgttcgcagtgcggtttgatttgattttgagactaaaagtcatccaaaccgcaaga 6248080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 581
Target Start/End: Original strand, 35375137 - 35375247
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    ||||||||| |||||  |||||||||| || ||||| | |||||       |||||||| | |||||||| | ||||||||||||||| ||||| |||||    
T  35375137 gtttggttcaattttagggttaaaagttattcgaaccgtaagattaaaaagcatgcggtatagtttggtttgtttgacttttaaaataaaatccgaacca 35375236  T
Q  571 aaccaaaccaa 581  Q
    ||| |||||||    
T  35375237 aacaaaaccaa 35375247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 652
Target Start/End: Original strand, 9330490 - 9330522
Alignment:
Q  620 gagacaatacaattttttgtttccaacattaaa 652  Q
    |||||||||||||||||||||||||||||||||    
T  9330490 gagacaatacaattttttgtttccaacattaaa 9330522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 683
Target Start/End: Complemental strand, 15882089 - 15882053
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgt 683  Q
    ||||||||| |||||||||||||||||||||||||||    
T  15882089 attaaaaagataaaacacaacatattttcaacaatgt 15882053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 695
Target Start/End: Original strand, 34914274 - 34914322
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||  |||||||||||||||||||| ||||||||| ||||||||    
T  34914274 attaaaaacctaaaacacaacatattttcagcaatgttttaaatttcat 34914322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 50952095 - 50952047
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaacca 575  Q
    |||||||||||||||||||||||||||||||| || || || |||||||    
T  50952095 ggtttggtttggttcggttgacttttaaaataaaacccgaatcaaacca 50952047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 706
Target Start/End: Original strand, 3935602 - 3935661
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||| ||| |||||||||||||||| ||| ||||||||| |||||||| | ||||||||    
T  3935602 attaataagttaaaacacaacatattctcatcaatgttttaaatttcatccaacattaca 3935661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 686
Target Start/End: Complemental strand, 6694308 - 6694269
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttt 686  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  6694308 attaaaaagttaaaacacaacatattttcagcaatgtttt 6694269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 11899027 - 11899074
Alignment:
Q  531 tggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaac 578  Q
    ||||||||||||||||| |||||||| |  ||||||||||||||||||    
T  11899027 tggtttggttcggttgatttttaaaaaatcatccaaaccaaaccaaac 11899074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 590
Target Start/End: Original strand, 16062880 - 16062943
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||||| ||| |||||||||||||||| ||| | || |||||||||| ||| |||||||    
T  16062880 ggtttggtttgattcagttgacttttaaaataaaattcgaatcaaaccaaactaatatggtttg 16062943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 590
Target Start/End: Original strand, 33769891 - 33769958
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||||||||| |||||||| |||| |||||  || |  |||||||||||||||||| ||||||    
T  33769891 atgcggtttggtttgattcggttgcctttcaaaatgaaaactgaaccaaaccaaaccaatgcggtttg 33769958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 653
Target Start/End: Complemental strand, 23475082 - 23475048
Alignment:
Q  619 cgagacaatacaattttttgtttccaacattaaaa 653  Q
    |||| ||||||||||||||||||||||||||||||    
T  23475082 cgaggcaatacaattttttgtttccaacattaaaa 23475048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 25532870 - 25532908
Alignment:
Q  657 taaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  25532870 taaaacacaacatatttccaacaatgttttaaatttcat 25532908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 27350672 - 27350730
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||  ||||||||||||||| ||| | ||| ||| ||||||||    
T  27350672 atgcggtttggtttggttcaattgacttttaaaataaaattcgaacaaaatcaaaccaa 27350730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 668 - 706
Target Start/End: Complemental strand, 47984403 - 47984365
Alignment:
Q  668 atattttcaacaatgtttttaatttcattccacattaca 706  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  47984403 atatttccgacaatgtttttaatttcattccacattaca 47984365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 560
Target Start/End: Original strand, 9330404 - 9330437
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaataca 560  Q
    |||||||||| |||||||||||||||||||||||    
T  9330404 ggtttggtttagttcggttgacttttaaaataca 9330437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 685
Target Start/End: Complemental strand, 15880085 - 15880048
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgttt 685  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15880085 ttaaaaaggtaaatcacaacatattttcagcaatgttt 15880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 610
Target Start/End: Complemental strand, 39185557 - 39185512
Alignment:
Q  565 aaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  39185557 aaaccaaaccaaaccaaagtggtttgagttggttcggttgttgcgg 39185512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 603
Target Start/End: Original strand, 44055785 - 44055822
Alignment:
Q  566 aaccaaaccaaaccaatgtggtttgagttggatcgatt 603  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  44055785 aaccaaaccaaacaaatgtggtttgggttggatcgatt 44055822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 73; Significance: 6e-33; HSPs: 3)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 471 - 653
Target Start/End: Original strand, 25825 - 26005
Alignment:
Q  471 gtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaacca 570  Q
    |||||||||| |||| |||||||||||||||||||| | |||||       ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  25825 gtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa-catgcagtttggtttggttcggttgacttttaaaataaaatccaaacca 25923  T
Q  571 aaccaaaccaatgtggtttgagttggatc-gattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||| ||||| ||||||| ||||||| | |||||| ||        ||||||||||||||||||||||| |||||||||||    
T  25924 aaccaaatcaatgcggtttgaattggatcgggttggtgtgg--ttttttcgagacaatacaattttttgttttcaacattaaaa 26005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 467 - 653
Target Start/End: Original strand, 14480 - 14663
Alignment:
Q  467 tgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaa 566  Q
    |||||||||||||  |||||| |||||||||||||||||| |||||||       |||||| ||||||||||||| ||||||| |||||  ||||||| |    
T  14480 tgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagataaaaaagcatgcgatttggtttggttcagttgactcttaaagcacaatccga 14579  T
Q  567 accaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaacattaaaa 653  Q
    |||||||||||| |||| ||||||  |||||||  |||||||||         |||||||||||||||||||||| |||||||||||    
T  14580 accaaaccaaacaaatgcggtttg-tttggatcagttggtgcggttttttt--gagacaatacaattttttgtttgcaacattaaaa 14663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 706
Target Start/End: Original strand, 26050 - 26079
Alignment:
Q  677 acaatgtttttaatttcattccacattaca 706  Q
    ||||||||||||||||||||||||||||||    
T  26050 acaatgtttttaatttcattccacattaca 26079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 453 - 576
Target Start/End: Complemental strand, 24645091 - 24644969
Alignment:
Q  453 aggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactttt 552  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||| ||| ||||||||||    
T  24645091 aggggtgttcgttgtgcggtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggtttgattc-gttgactttt 24644993  T
Q  553 aaaatacaatccaaaccaaaccaa 576  Q
    |||||| |||||||||||||||||    
T  24644992 aaaataaaatccaaaccaaaccaa 24644969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 452 - 576
Target Start/End: Original strand, 9686000 - 9686124
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||||||||||| |||| ||||||||||||||||||| | ||||||||| |||| |||||||        ||||||||||||||||||||||| |||||    
T  9686000 taggggtgttcgcgatgcagtttggttcgattttgaggctcaaagtcatctgaaccgcaagataaataagtatgcggtttggtttggttcggttaacttt 9686099  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    ||||||| ||||| |||||||||||    
T  9686100 taaaataaaatccgaaccaaaccaa 9686124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 451 - 653
Target Start/End: Complemental strand, 892482 - 892276
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||| |||||||||  ||||||||||||| ||||| ||| |||||||||||||||| |||| ||       |||||||||||||||||||||||| ||||    
T  892482 ctagaggtgttcgcggtgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaacatgcggtttggtttggttcggttaactt 892383  T
Q  551 ttaaaatacaatccaaaccaaacc------aaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttcca 644  Q
    ||||||||  |||| ||| |||||      |||||||||||||||| ||||||| | ||| |||||        |||||||||| |||||||||||| ||    
T  892382 ttaaaataacatccgaactaaaccaaacaaaaaccaatgtggtttgggttggattggttgatgcgg--ttttttcgagacaatataattttttgttttca 892285  T
Q  645 acattaaaa 653  Q
    |||||||||    
T  892284 acattaaaa 892276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 646
Target Start/End: Original strand, 30752503 - 30752671
Alignment:
Q  482 ttttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt----taaaatacaatccaaaccaaaccaaa 577  Q
    ||||||| | |||||||||| |||| |||||||       ||||||||||||||||||||||||||||||    |||||| |||  ||||||||| ||||    
T  30752503 ttttgagatgaaaagtcatctgaaccgcaagataaaaaagcatgcggtttggtttggttcggttgacttttaaataaaattcaaaacaaaccaaatcaaa 30752602  T
Q  578 ccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaatacaattttttgtttccaac 646  Q
    |||||| |||||  |||| |||| |||||||||        ||||||||||||||||||||||||||||    
T  30752603 ccaatgcggtttaggttgaatcgtttggtgcggttttttttcgagacaatacaattttttgtttccaac 30752671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 653
Target Start/End: Original strand, 4562875 - 4562998
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncgagacaat 627  Q
    |||||||||||||| ||||| |||||||||| |||  |||||||||||||||||| || ||||||||| || | ||| |||||         ||||||||    
T  4562875 gtttggtttggttcagttgatttttaaaataaaatttaaaccaaaccaaaccaatatgatttgagttgtattggttgatgcggttttttt--gagacaat 4562972  T
Q  628 acaattttttgtttccaacattaaaa 653  Q
    ||||||||||||||||||||||||||    
T  4562973 acaattttttgtttccaacattaaaa 4562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 6266846 - 6266967
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||| ||||||||  ||||||||||| || |||||||||||| |||||||||||| | || ||       |||||||||||||||||| |||||||||||    
T  6266846 taggagtgttcgcggtgcggtttggtacggttttgaggttaatagtcatccgaaccgtaaaataaaaaaacatgcggtttggtttggtacggttgacttt 6266945  T
Q  552 taaaatacaatccaaaccaaac 573  Q
    ||||||  || |||||||||||    
T  6266946 taaaatgaaaaccaaaccaaac 6266967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 452 - 556
Target Start/End: Original strand, 10590793 - 10590897
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||| ||||  |||||||||||||| |||||||  |||||||||||| |||||| ||||       |||||||||||||||||||||||||| |||    
T  10590793 taggggtggtcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 10590892  T
Q  552 taaaa 556  Q
    |||||    
T  10590893 taaaa 10590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 608
Target Start/End: Complemental strand, 12108634 - 12108548
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    ||||||||||| |||||||| |||||||||||||||| | |   ||||||||||||||||||||||||| ||| ||||| |||||||    
T  12108634 catgcggtttgttttggttcagttgacttttaaaatatagtttgaaccaaaccaaaccaatgtggtttgcgttagatcggttggtgc 12108548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 576
Target Start/End: Complemental strand, 14940695 - 14940588
Alignment:
Q  469 cggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaac 568  Q
    ||||||| |||| |||| |||||||| || |||||||| |||||||       ||||| ||||||||||||||||||||||||| ||||| ||||| |||    
T  14940695 cggtttgattcggttttaaggttaaaggttatccgaaccgcaagataaaaaaacatgcagtttggtttggttcggttgactttttaaataaaatccgaac 14940596  T
Q  569 caaaccaa 576  Q
    ||||||||    
T  14940595 caaaccaa 14940588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 610
Target Start/End: Complemental strand, 32190790 - 32190647
Alignment:
Q  472 tttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaa 571  Q
    |||||||||||||||||| ||||||||||| |||| | | |||       |||| ||||||||||| || |||| |||||||||||| ||||||||| ||    
T  32190790 tttggttcgattttgaggctaaaagtcatctgaaccgtatgataaaaaaacatgaggtttggtttgatttggttaacttttaaaataaaatccaaactaa 32190691  T
Q  572 accaaaccaa-----tgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||||     ||  ||||||||||||||| |||||||||    
T  32190690 accaaaccaaacaaatgcagtttgagttggatcggttggtgcgg 32190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 556
Target Start/End: Complemental strand, 35040353 - 35040246
Alignment:
Q  449 acctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgac 548  Q
    ||||||||||||||||  |||||||||||||| |||||||  |||||||||||| ||| || ||||       ||||||||||||||||||| ||||||     
T  35040353 acctaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttggttgat 35040254  T
Q  549 ttttaaaa 556  Q
    ||||||||    
T  35040253 ttttaaaa 35040246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 523 - 610
Target Start/End: Complemental strand, 7170166 - 7170074
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaac-----caaaccaatgtggtttgagttggatcgattggtgcgg 610  Q
    ||||||||||| |||| ||||||||||||||||||| ||| ||||||||||     |||||||||||||||||  |||||||| |||||||||    
T  7170166 atgcggtttggattggatcggttgacttttaaaataaaattcaaaccaaaccaaatcaaaccaatgtggtttggattggatcggttggtgcgg 7170074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 600
Target Start/End: Complemental strand, 13859519 - 13859375
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||| || ||||||||||||| |||||||||||||||| | |||||||| |||| ||       |||| | || | ||||||| ||||||| ||||||    
T  13859519 ggtgtttgcgatgcggtttggtttgattttgaggttaaaaattatccgaaccgcaaaataaaaaagcatgtgtttcgatttggtttggttgacgtttaaa 13859420  T
Q  556 atacaatccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
    | | ||  |||||||||| ||||||||| ||||| ||||||||||    
T  13859419 aaaaaactcaaaccaaactaaaccaatgcggtttcagttggatcg 13859375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 563
Target Start/End: Original strand, 22413779 - 22413891
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    |||||||||||||   ||| ||||| || | |||||||||||||||||||||||||   |||||        ||||||||||||||||||||||||||||    
T  22413779 ctaggggtgttcgaggtgcagtttgatttggttttgaggttaaaagtcatccgaaccagaagataaataagtatgcggtttggtttggttcggttgactt 22413878  T
Q  551 ttaaaatacaatc 563  Q
    |||||||| ||||    
T  22413879 ttaaaataaaatc 22413891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 600
Target Start/End: Complemental strand, 31945561 - 31945421
Alignment:
Q  455 gggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaa 554  Q
    ||||||||||  || |||||| |||| ||||||||||||||||||||||||| | |||||        ||||| |||||||     ||||||||||||||    
T  31945561 gggtgttcgcggtgtggtttgtttcggttttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcgttttggtt-----cggttgacttttaa 31945467  T
Q  555 aatacaatccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
    |||| |||| ||| |||||||| |||||| ||||||  ||||||||    
T  31945466 aataaaatcaaaatcaaaccaatccaatgcggtttggattggatcg 31945421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 5874222 - 5874163
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||||||||||||| ||||||||    |||||||||||||||||||||    
T  5874222 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 5874163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 647 - 706
Target Start/End: Complemental strand, 24644894 - 24644835
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  24644894 attaaaaaactaaaacacaacatattttcaacaatgttttaaatttcatccaacattaca 24644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 576
Target Start/End: Original strand, 29048069 - 29048193
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    ||||| |||||||  |||||||||||||| |||| |||||||||||||||| |||   ||| |         |||| |||||||||||||||||||||||    
T  29048069 tagggatgttcgcggtgcggtttggttcggttttaaggttaaaagtcatccaaaccataaggtaaaaaggtgtgcgatttggtttggttcggttgacttt 29048168  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    ||||||| ||||| ||| |||||||    
T  29048169 taaaataaaatccgaactaaaccaa 29048193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 8135378 - 8135440
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    |||||||||||||  |||| ||||||||| |||||||| |||||||||||||||| |||||||    
T  8135378 taggggtgttcgcggtgcgttttggttcggttttgaggctaaaagtcatccgaaccgcaagat 8135440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 11417069 - 11417127
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||| ||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  11417069 atgctgtttgatttggtttgattgacttttaaaataaaatccaaaccaaaccaaaccaa 11417127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 705
Target Start/End: Original strand, 11417212 - 11417270
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattac 705  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| | |||||||    
T  11417212 attaaaaagataaaacacaacatattttcagcaatgttttaaatttcatccaacattac 11417270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 577
Target Start/End: Complemental strand, 19135181 - 19135127
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaa 577  Q
    |||||||||||||||||||||||||||||||||||| |||   ||||||||||||    
T  19135181 atgcggtttggtttggttcggttgacttttaaaataaaatatgaaccaaaccaaa 19135127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 10329614 - 10329707
Alignment:
Q  107 ccatttgaactgatccacctccaagatcagctactgccactgtctctgaaaaatcttttcccaagtttcccaaaacatagttaattgtcaccta 200  Q
    |||||||||| |||||||||||||||||| | ||  | || || |||||| ||||| ||||||| |||||||| | ||||||||| ||||||||    
T  10329614 ccatttgaacagatccacctccaagatcaaccaccccaacagtgtctgaataatctcttcccaactttcccaatagatagttaatagtcaccta 10329707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 581
Target Start/End: Complemental strand, 13811010 - 13810880
Alignment:
Q  451 ctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgactt 550  Q
    ||||||||||||||  || ||||||||| | |||||||   ||||||||||| ||| || ||||       ||| |||||||||||||||| ||||| ||    
T  13811010 ctaggggtgttcgcggtgaggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatacggtttggtttggttcagttgattt 13810911  T
Q  551 ttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||    |||||||||||||||||||||    
T  13810910 ttaaaaagtcatccaaaccaaaccaaaccaa 13810880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 695
Target Start/End: Original strand, 9686193 - 9686241
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcat 695  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  9686193 attaaaaagctaaaacacaacttattttcaacaatgttttaaatttcat 9686241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 556
Target Start/End: Complemental strand, 5288040 - 5287940
Alignment:
Q  456 ggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttttaaa 555  Q
    |||||||||  |||||||||||||| |||||||  |  ||||||||| |||||| ||||       ||||| |||||||||||||||||||| |||||||    
T  5288040 ggtgttcgcggtgcggtttggttcggttttgagcatttaagtcatccaaactgcgagataaataaacatgcagtttggtttggttcggttgatttttaaa 5287941  T
Q  556 a 556  Q
    |    
T  5287940 a 5287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 647 - 706
Target Start/End: Complemental strand, 7170022 - 7169963
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaatttcattccacattaca 706  Q
    ||||||||| |||||||||||||||||| | ||||||||| |||||||| | ||||||||    
T  7170022 attaaaaagttaaaacacaacatatttttagcaatgttttaaatttcatccaacattaca 7169963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 686
Target Start/End: Complemental strand, 7676285 - 7676247
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtttt 686  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7676285 ttaaaaaggtaaaatacaacatattttcaacaatgtttt 7676247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 12270569 - 12270623
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaa 576  Q
    |||||||||||||||||||||||||| ||||||||    ||||||||||||||||    
T  12270569 catgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 12270623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 555
Target Start/End: Original strand, 15859668 - 15859771
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||| |||||||||| |||||||  |||||||| ||| ||| || ||||       |||||||||||||||| ||||||||| |||    
T  15859668 taggggtgttcgcggtgccgtttggttcggttttgagcataaaagtcttccaaaccgcgagattaaaaagcatgcggtttggtttgattcggttgatttt 15859767  T
Q  552 taaa 555  Q
    ||||    
T  15859768 taaa 15859771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 578
Target Start/End: Complemental strand, 10494521 - 10494395
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||| ||  |||||||||||| | |||||||  |||||||||||| ||| || ||||       |||| |||||| |||||||||||||| |||    
T  10494521 taggggtgtttgcggtgcggtttggtttggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatggggtttgatttggttcggttgatttt 10494422  T
Q  552 taaaatacaatccaaaccaaaccaaac 578  Q
    |||||    |||||||| |||||||||    
T  10494421 taaaaagtcatccaaactaaaccaaac 10494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 583
Target Start/End: Original strand, 25136784 - 25136845
Alignment:
Q  522 catgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatg 583  Q
    ||||||||| |||||||||||||||  ||||||||    |||||||||||||||||||||||    
T  25136784 catgcggttcggtttggttcggttggattttaaaaagtcatccaaaccaaaccaaaccaatg 25136845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 684
Target Start/End: Complemental strand, 12108497 - 12108461
Alignment:
Q  648 ttaaaaaggtaaaacacaacatattttcaacaatgtt 684  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12108497 ttaaaaaggtaaaacacaacatattttcaactatgtt 12108461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 581
Target Start/End: Complemental strand, 13802048 - 13801993
Alignment:
Q  526 cggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||||||||| ||||| ||||||||    |||||||||||||||||||||    
T  13802048 cggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaaccaaaccaa 13801993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 20500507 - 20500569
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    |||||||||||||  |||||||||||| | |||||||| |||||||||  ||||| |||||||    
T  20500507 taggggtgttcgcggtgcggtttggtttggttttgagggtaaaagtcactcgaaccgcaagat 20500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 608
Target Start/End: Complemental strand, 13532308 - 13532263
Alignment:
Q  563 ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgc 608  Q
    |||||||||||||||||| || |||||||||| ||||| |||||||    
T  13532308 ccaaaccaaaccaaaccagtgcggtttgagttagatcggttggtgc 13532263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 581
Target Start/End: Complemental strand, 15859319 - 15859266
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    ||||||||||||||||||| ||||||| ||  || || ||||||||||||||||    
T  15859319 gtttggtttggttcggttggcttttaagatgaaaacccaaccaaaccaaaccaa 15859266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 692
Target Start/End: Complemental strand, 16971671 - 16971638
Alignment:
Q  659 aaacacaacatattttcaacaatgtttttaattt 692  Q
    |||||||||||||||||||||||||||| |||||    
T  16971671 aaacacaacatattttcaacaatgttttaaattt 16971638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 692
Target Start/End: Original strand, 29048267 - 29048312
Alignment:
Q  647 attaaaaaggtaaaacacaacatattttcaacaatgtttttaattt 692  Q
    ||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  29048267 attaaaaagttaaaacacaacatatcttcaataatgttttaaattt 29048312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 33550338 - 33550391
Alignment:
Q  528 gtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||| ||||||||||||||| ||||||||    |||||||||||||||||||||    
T  33550338 gtttagtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaa 33550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 448 - 581
Target Start/End: Complemental strand, 69684 - 69551
Alignment:
Q  448 tacctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttga 547  Q
    |||||||||||||||||  ||||||||||||||||||||||  |||||||||||| ||| || ||||       |||| |||||||||||||||||||||    
T  69684 tacctaggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttcggttga 69585  T
Q  548 cttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
     ||||||||    |||||||||||||||||||||    
T  69584 tttttaaaaagtcatccaaaccaaaccaaaccaa 69551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 448 - 581
Target Start/End: Original strand, 105968 - 106101
Alignment:
Q  448 tacctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttga 547  Q
    |||||||||||||||||  ||||||||||||||||||||||   ||||||||||| ||| |||||||       |||| |||||||||||||||||||||    
T  105968 tacctaggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttcggttga 106067  T
Q  548 cttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
     |||||||||   ||||||||| |||||||||||    
T  106068 tttttaaaatgtcatccaaaccgaaccaaaccaa 106101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 448 - 581
Target Start/End: Original strand, 128575 - 128708
Alignment:
Q  448 tacctaggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttga 547  Q
    |||||||||||||| ||  ||||||||||||||||||||||  |||||||||||| ||| |||||||       |||| ||||||||||||||| |||||    
T  128575 tacctaggggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttctgttga 128674  T
Q  548 cttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
     ||||||||    ||||||||| |||||||||||    
T  128675 tttttaaaaagtcatccaaaccgaaccaaaccaa 128708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 527 - 653
Target Start/End: Original strand, 6258 - 6387
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaat-----ccaaaccaaaccaaaccaatgtggtttgagttggatcgattggtgcggnnnnnnnncga 621  Q
    ||||||||||| |||||||||||||||||||| |||     ||||||||||||||| ||||||||||||||| |||| | ||||| |||         ||    
T  6258 ggtttggtttgattcggttgacttttaaaataaaattctaaccaaaccaaaccaaaacaatgtggtttgagtaggattggttggtacggttttttt--ga 6355  T
Q  622 gacaatacaattttttgtttccaacattaaaa 653  Q
    ||||||||||||||||||||||||| ||||||    
T  6356 gacaatacaattttttgtttccaactttaaaa 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 62413 - 62471
Alignment:
Q  523 atgcggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaa 581  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  62413 atgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaaccaaaccaa 62471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 1107 - 1163
Alignment:
Q  458 tgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||||    
T  1107 tgttcgcaatgtggtttggttcggttttgaggctaaaagtcatccgaaccgcaagat 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 7676 - 7732
Alignment:
Q  458 tgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagat 514  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||||    
T  7676 tgttcgcaatgtggtttggttcggttttgaggctaaaagtcatccgaaccgcaagat 7732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 590
Target Start/End: Complemental strand, 40640 - 40577
Alignment:
Q  527 ggtttggtttggttcggttgacttttaaaatacaatccaaaccaaaccaaaccaatgtggtttg 590  Q
    ||||||||||||||||||||| ||||||||    ||||||||||||||||||||||| ||||||    
T  40640 ggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaatgcggtttg 40577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 6023 - 5899
Alignment:
Q  452 taggggtgttcgcaatgcggtttggttcgattttgaggttaaaagtcatccgaactgcaagatnnnnnnncatgcggtttggtttggttcggttgacttt 551  Q
    |||||||||||||  ||||||||||||||||||  ||  ||| | |||||| ||| || |||        |||||||||||||||||||||||||| |||    
T  6023 taggggtgttcgcggtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 5924  T
Q  552 taaaatacaatccaaaccaaaccaa 576  Q
    |||||    ||||||||||||||||    
T  5923 taaaaagtcatccaaaccaaaccaa 5899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 600
Target Start/End: Original strand, 6054 - 6091
Alignment:
Q  563 ccaaaccaaaccaaaccaatgtggtttgagttggatcg 600  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  6054 ccaaaccaaaccaaaccaatgcggtttgggttggatcg 6091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University