View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4575-Insertion-2 (Length: 966)

Name: NF4575-Insertion-2
Description: NF4575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4575-Insertion-2
NF4575-Insertion-2
[»] chr6 (4 HSPs)
chr6 (8-707)||(22082036-22082739)
chr6 (774-966)||(22081777-22081969)
chr6 (774-872)||(20909720-20909818)
chr6 (774-872)||(20924168-20924266)
[»] chr4 (6 HSPs)
chr4 (8-707)||(37617236-37617936)
chr4 (774-949)||(37618003-37618178)
chr4 (77-177)||(9203896-9203996)
chr4 (77-177)||(9208115-9208215)
chr4 (253-338)||(9203736-9203823)
chr4 (253-335)||(9207958-9208042)
[»] chr5 (2 HSPs)
chr5 (9-706)||(40164147-40164848)
chr5 (774-829)||(40164024-40164079)
[»] chr3 (5 HSPs)
chr3 (101-642)||(19767078-19767617)
chr3 (8-192)||(45456419-45456604)
chr3 (8-107)||(19767948-19768046)
chr3 (837-949)||(52127942-52128054)
chr3 (774-822)||(19766924-19766972)
[»] chr1 (3 HSPs)
chr1 (8-192)||(6921503-6921690)
chr1 (8-192)||(38238188-38238375)
chr1 (774-872)||(41326614-41326712)
[»] chr2 (2 HSPs)
chr2 (492-688)||(7827905-7828102)
chr2 (8-216)||(7827672-7827880)
[»] chr7 (2 HSPs)
chr7 (837-949)||(24760507-24760619)
chr7 (776-873)||(11504533-11504630)
[»] scaffold0135 (14 HSPs)
scaffold0135 (77-177)||(1979-2079)
scaffold0135 (77-177)||(6194-6294)
scaffold0135 (77-177)||(10409-10509)
scaffold0135 (77-177)||(14624-14724)
scaffold0135 (77-177)||(18839-18939)
scaffold0135 (77-177)||(23054-23154)
scaffold0135 (77-177)||(27269-27369)
scaffold0135 (253-338)||(1819-1906)
scaffold0135 (253-338)||(6034-6121)
scaffold0135 (253-338)||(10249-10336)
scaffold0135 (253-338)||(14464-14551)
scaffold0135 (253-338)||(18679-18766)
scaffold0135 (253-338)||(22894-22981)
scaffold0135 (253-338)||(27109-27196)
[»] chr8 (2 HSPs)
chr8 (774-872)||(42312834-42312932)
chr8 (809-862)||(43227254-43227307)


Alignment Details
Target: chr6 (Bit Score: 635; Significance: 0; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 635; E-Value: 0
Query Start/End: Original strand, 8 - 707
Target Start/End: Complemental strand, 22082739 - 22082036
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22082739 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 22082640  T
Q  108 tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22082639 tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata 22082540  T
Q  208 tcattataagtatttcatgctatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacagt 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22082539 tcattataagtatttcatgttatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctaccccatattctaaatgattcaacacacagt 22082440  T
Q  308 tatagatgtaaaaatttgaaagaaactctttataatataagtaaaattnnnnnnnn----taaaaggatcttcaaattgagatggtaagcataaatataa 403  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||    
T  22082439 tatacatgtaaatatttgaaagaaactctttataatataagtaaaattaaaaaaataaaataaaaggatcttcaaattgagatggtaagcataaatataa 22082340  T
Q  404 gaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttat 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22082339 gaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttat 22082240  T
Q  504 tttcaacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagttctgccccaccatcgcgaccaag 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  22082239 tttcaacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactctgagctctgccccaccatcgcgagcaag 22082140  T
Q  604 ttgtcaacaatccaaaaaggaattcaaaatcaaggataccttgttgctttaggagggctgaaacaatgaaaaggaaaaatcaacagtcactgaaaaatta 703  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22082139 ttgtcaacaatccaaaaaggaattcaaaatcaaggataccttgttgctttaggagggctgaaacaatgaaaaggaaaaatcaacagtcactgaaaaatta 22082040  T
Q  704 tgag 707  Q
    ||||    
T  22082039 tgag 22082036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 774 - 966
Target Start/End: Complemental strand, 22081969 - 22081777
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggtttt 873  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22081969 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggtttt 22081870  T
Q  874 gannnnnnnaaacatagaacaccaaaccctaaaaggaatcaatatgcaagataattcaatgttcccaattcatcttaattcaaactcattttg 966  Q
    ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22081869 gatttttttaaacatagaacaccaaaccctaaaaggaatcaatatgcaagataattcaatgttcccaattcatcttaattcaaactcattttg 22081777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 774 - 872
Target Start/End: Original strand, 20909720 - 20909818
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggttt 872  Q
    ||||||||||||||||||| || |||  | |||| ||| | |||| |||| |||||| |||||||||||||||| | ||||||| ||||  ||||||||    
T  20909720 cacagtggcatcaagtaagacgtcttctattacagagagatcttcctgtcgaacaacacttgattctaaaactcttgcttcatcatatggcagtggttt 20909818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 774 - 872
Target Start/End: Original strand, 20924168 - 20924266
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggttt 872  Q
    ||||||||||||||||||| || |||  | |||| ||| | |||| |||| |||||| |||||||||||||||| | ||||||| ||||  ||||||||    
T  20924168 cacagtggcatcaagtaagacgtcttctattacagagagatcttcctgtcgaacaacacttgattctaaaactcttgcttcatcatatggcagtggttt 20924266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 617; Significance: 0; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 617; E-Value: 0
Query Start/End: Original strand, 8 - 707
Target Start/End: Original strand, 37617236 - 37617936
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  37617236 actatatagcaatttgaaaatgagatacataacaccatctatcaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggctgc 37617335  T
Q  108 tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37617336 tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcaaaaaataatataattgagttagatctgctcaaata 37617435  T
Q  208 tcattat-aagtatttcatgctatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacag 306  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37617436 tcattataaagtatttcatgctatactatcaataaaaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacag 37617535  T
Q  307 ttatagatgtaaaaatttgaaagaaactctttataatataagtaaaattnnnnnnnntaaaaggatcttcaaattgagatggtaagcataaatataagaa 406  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  37617536 ttatacatgtaaaaatttgaaagaaactctttataatataagtaaaattaaaaaaaataaaaggatcttcaaattgagatggtaagcataaatataagaa 37617635  T
Q  407 atcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttatttt 506  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37617636 atcaaactattcaaagtctctcccatcaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgtttatttt 37617735  T
Q  507 caacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagttctgccccaccatcgcgaccaagttg 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  37617736 caacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagctctgccccaccatcgcaagcaagttg 37617835  T
Q  607 tcaacaatccaaaaaggaattcaaaatcaaggataccttgttgctttaggagggctgaaacaatgaaaaggaaaaatcaacagtcactgaaaaattatga 706  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  37617836 tcaacaatccaaaaaggaattcaaaatcaaggacaccttgttgctttaggagggctgaaacaatgaaaaggaaaaatcaacagtcgcagaaaaattatga 37617935  T
Q  707 g 707  Q
    |    
T  37617936 g 37617936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 774 - 949
Target Start/End: Original strand, 37618003 - 37618178
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggtttt 873  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37618003 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactccttcttcatcctatgtaagtggtttt 37618102  T
Q  874 gannnnnnnaaacatagaacaccaaaccctaaaaggaatcaatatgcaagataattcaatgttcccaattcatctt 949  Q
    ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37618103 gatttttttaaacatagaacaccaaaccctaaaaggaatcaatatgcaagataattcaatgttcccaattcatctt 37618178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 9203996 - 9203896
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  9203996 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 9203897  T
Q  177 a 177  Q
    |    
T  9203896 a 9203896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 9208215 - 9208115
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  9208215 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 9208116  T
Q  177 a 177  Q
    |    
T  9208115 a 9208115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 9203823 - 9203736
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  9203823 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 9203736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 9208042 - 9207958
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactc 335  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| |||||||||||    
T  9208042 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactc 9207958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 459; Significance: 0; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 9 - 706
Target Start/End: Complemental strand, 40164848 - 40164147
Alignment:
Q  9 ctatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgtt 108  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |    
T  40164848 ctatatagcaatttgaaaatgagatacataacaccatcttccaagacacattatcaacataaaatatcatgctaaataactttttgagttataggttgct 40164749  T
Q  109 ttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaatat 208  Q
    |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40164748 ttaagatccaaatgtgtcgtacatttttagttcaagcctaaag-ttttatgaagaatcctttcagaaaataatctaattgagttagatctgctcaaatat 40164650  T
Q  209 cattat-aagtatttcatgctatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacacagt 307  Q
    |||||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||  |||||||    
T  40164649 cattataaagcatttcatactatactatcaataaaaaaaccaaagttgcaatgtatgctatctaaggctattccatgttctaaattattca--acacagt 40164552  T
Q  308 tatagatgtaaaaatttgaaagaaactctttataatataagtaaaattnnnnnnnntaaaaggatcttcaaattgagatggtaagcataaatataagaaa 407  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||         |||||||||||||||||||||| |||||||||| |||||| |||    
T  40164551 tatacatgtaaaaatttgaaagaaactc--tataatataagtaaaataaaaaaaaataaaaggatcttcaaattgagacggtaagcatatatataaaaaa 40164454  T
Q  408 tcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaacta------ccagc--aaatttgt 499  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||      ||| |  ||||||||    
T  40164453 acaaactattcaaagtctctcccaccaaataagtcaacacatttcgtttcaattttcaaccaatataaacttcaaactaaaatatccaccagaaatttgt 40164354  T
Q  500 ttattttcaacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagttctgccccaccatcgcgac 599  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||| | |||||||||||| || ||||||||||||||||| ||||||||||||||||||     
T  40164353 ttattttcaacgttggaacaaaaattaaacaaagaagacaaacatattatagtacaaagacaccgtcataccactgtgagctctgccccaccatcgcgag 40164254  T
Q  600 caagttgtcaacaatccaaaaaggaattcaaaatcaaggataccttgttgctttaggagggctgaaacaatgaaaaggaaaaatcaacagtcactgaaaa 699  Q
    |||||||||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||    
T  40164253 caagttgtcaacaatccaaaaatggattcaaaatctaggataccctgttgctttaggagggctgaaacaatgaaaaggaaagatcaacaatcacagaaaa 40164154  T
Q  700 attatga 706  Q
    |||||||    
T  40164153 attatga 40164147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 829
Target Start/End: Complemental strand, 40164079 - 40164024
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaa 829  Q
    |||| |||||||||||||||  ||||||||| ||||| ||| ||||||||||||||    
T  40164079 cacaatggcatcaagtaagttcactttgactgcaaagctaatttcatgtcaaacaa 40164024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 452; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 101 - 642
Target Start/End: Complemental strand, 19767617 - 19767078
Alignment:
Q  101 aggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgc 200  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19767617 aggttgctttaagatccaaatgtgtcgtacattttttgttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgc 19767518  T
Q  201 tcaaatatcattataa-gtatttcatgctatactatcaataagaaaaccaaagttgcaatgtatgctatctaaggctactccatattctaaatgattcaa 299  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19767517 tcaaatatcattataaagtatttcatgctatactatcaataaaaaaaccaaagttgcaatgtaagctatctaaggctactccatattctaaatgattcaa 19767418  T
Q  300 cacacagttatagatgtaaaaatttgaaagaaactctttataatataagtaaaattnnnnnnnntaaaaggatcttcaaattgagatggtaagcataaat 399  Q
    |||||||||||| |||||||| |||||||||||||||  |||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  19767417 cacacagttatacatgtaaaa-tttgaaagaaactct--ataatataagtaaaattaaaaaaaataaaaggatcttcaaattgagatggtaagcataaat 19767321  T
Q  400 ataagaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttcaattttcaaccaatataaacttcaaactaccagcaaatttgt 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  19767320 ataagaaatcaaactattcaaagtctctcccaccaaatgagtcaacacattttgtttaaattttcaaccaatgtaaacttcaaactaccaggaaatttgt 19767221  T
Q  500 ttattttcaacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagttctgccccaccatcgcgac 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  19767220 ttattttcaacattggaacaaaaatcaaacaaagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagctctgccccaccatcgcgaa 19767121  T
Q  600 caagttgtcaacaatccaaaaaggaattcaaaatcaaggatac 642  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19767120 caagttgtcaacaatccaaaaaggaattcaaaatcaaggatac 19767078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 45456419 - 45456604
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 107  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||     
T  45456419 actatatagcaatttgaaaatgagatacataacaccatctgcaaagatacattctcaacataaaatatcatgctaaataaccttttgggttataggttgc 45456518  T
Q  108 tttaagatccaaatgtgtc-gtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagtt 192  Q
    |||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  45456519 tttaagatccaaatgtgtcaatacatttttggttcatgcctaaagattttatgaagaatcctttcagaaaatgatataattgagtt 45456604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 19768046 - 19767948
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19768046 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctgaacataaaatatcatgctaaatag-tttttgagttataggttgt 19767948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 837 - 949
Target Start/End: Complemental strand, 52128054 - 52127942
Alignment:
Q  837 ttctaaaactcctacttcatcctatgtaagtggttttgannnnnnnaaacatagaacaccaaaccctaaaaggaatcaatatgcaagataattcaatgtt 936  Q
    ||||||||| ||| ||||||||||||  ||||||||||         |||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  52128054 ttctaaaacccctgcttcatcctatggtagtggttttggttttgtttaacatagaacaccaaaccctaaaaggaatcaaaatgcaagtgaattcaatgtt 52127955  T
Q  937 cccaattcatctt 949  Q
    |||||||||||||    
T  52127954 cccaattcatctt 52127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 774 - 822
Target Start/End: Complemental strand, 19766972 - 19766924
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgt 822  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19766972 cacagtggcatcaagtaagtcgactttgactacaaagataactccatgt 19766924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 1e-68; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 6921690 - 6921503
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaat-agctttttgagttataggttg 106  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | | ||||| |||||||||||    
T  6921690 actatatagcaatttgaaaatgagatacataacaccatctgcaaagacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttg 6921591  T
Q  107 ttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcc--tttcagaaaataatataattgagtt 192  Q
     ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||    
T  6921590 ctttaagatccaaatgtgtcatacatttttggttcatgcctaaagattttatgaagaatcctttttcagaaaatgatataattgagtt 6921503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 38238188 - 38238375
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaat-agctttttgagttataggttg 106  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | | ||||| |||||||||||    
T  38238188 actatatagcaatttgaaaatgagatacataacaccatctgcaaagacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttg 38238287  T
Q  107 ttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcc--tttcagaaaataatataattgagtt 192  Q
     ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||    
T  38238288 ctttaagatccaaatgtgtcatacatttttggttcatgcctaaagattttatgaagaatcctttttcagaaaatgatataattgagtt 38238375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 774 - 872
Target Start/End: Original strand, 41326614 - 41326712
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggttt 872  Q
    ||||||||||||||||||| || ||| || |||| ||| | |||| |||| |||||  |||||||||||||||| | ||||||| ||||  ||||||||    
T  41326614 cacagtggcatcaagtaagacgtcttcgattacagagagatcttcctgtcgaacaaaacttgattctaaaactcttgcttcatcatatggcagtggttt 41326712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 4e-62; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 492 - 688
Target Start/End: Original strand, 7827905 - 7828102
Alignment:
Q  492 aaatttgtttattttcaacattggaacaaaaatcaaaca-aagaagaaaaacacactatagtacaaaggcatcgtcataccactgtgagttctgccccac 590  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||| |||| |||| |||||    
T  7827905 aaatttgtttattttcaacattggaacataaatcaaacagaagaagaaaaacacattatagtacaaagacattgtcataccactatgagctctgtcccac 7828004  T
Q  591 catcgcgaccaagttgtcaacaatccaaaaaggaattcaaaatcaaggataccttgttgctttaggagggctgaaacaatgaaaaggaaaaatcaaca 688  Q
    ||| |||| |||||||| |||||||| |||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  7828005 cattgcgagcaagttgttaacaatccgaaaagggattcaaaatctagaataccttgttgctttagaagggctgaaacaatgaaaagaaaagatcaaca 7828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 8 - 216
Target Start/End: Original strand, 7827672 - 7827880
Alignment:
Q  8 actatatagcaatttgaaaatgagatacataacaccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 107  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| || |||||||||| ||||||||||||   ||||     
T  7827672 actatatagcaatttgaaaatgagatacataacaacatctgccaagacacattctcagcataaaagataatgctaaataactttttgagttacttgttgc 7827771  T
Q  108 tttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaaataatataattgagttagatctgctcaaata 207  Q
     ||||||| |||||||||  ||||||||||||| | ||||||||||  ||| |||||||||||||||||||||||||| |||||||| |||| || ||||    
T  7827772 attaagattcaaatgtgtaatacatttttggttaaggcctaaagttgatataaagaatcctttcagaaaataatataactgagttaggtctgttcgaata 7827871  T
Q  208 tcattataa 216  Q
    |||||||||    
T  7827872 tcattataa 7827880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 837 - 949
Target Start/End: Complemental strand, 24760619 - 24760507
Alignment:
Q  837 ttctaaaactcctacttcatcctatgtaagtggttttgannnnnnnaaacatagaacaccaaaccctaaaaggaatcaatatgcaagataattcaatgtt 936  Q
    ||||||||| ||| ||||||||||||  ||||||||||         |||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  24760619 ttctaaaacccctgcttcatcctatggtagtggttttggttttgtttaacatagaacaccaaaccctaaaaggaatcaaaatgcaagtgaattcaatgtt 24760520  T
Q  937 cccaattcatctt 949  Q
    |||||||||||||    
T  24760519 cccaattcatctt 24760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 776 - 873
Target Start/End: Complemental strand, 11504630 - 11504533
Alignment:
Q  776 cagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggtttt 873  Q
    |||||||||||||| || || ||| || |||||||||| |||||||||||||||| |||||||||||||||| | ||||||| ||||  |||||||||    
T  11504630 cagtggcatcaagtgagacgtcttcgattacaaagatatcttcatgtcaaacaacacttgattctaaaactcttgcttcatcatatggtagtggtttt 11504533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 37; Significance: 0.00000000002; HSPs: 14)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 2079 - 1979
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  2079 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 1980  T
Q  177 a 177  Q
    |    
T  1979 a 1979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 6294 - 6194
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  6294 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 6195  T
Q  177 a 177  Q
    |    
T  6194 a 6194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 10509 - 10409
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  10509 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 10410  T
Q  177 a 177  Q
    |    
T  10409 a 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 14724 - 14624
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  14724 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 14625  T
Q  177 a 177  Q
    |    
T  14624 a 14624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 18939 - 18839
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  18939 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 18840  T
Q  177 a 177  Q
    |    
T  18839 a 18839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 23154 - 23054
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  23154 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 23055  T
Q  177 a 177  Q
    |    
T  23054 a 23054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 27369 - 27269
Alignment:
Q  77 atgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaagtttttatgaagaatcctttcagaaa 176  Q
    |||||||| | |||| |||||| ||||||| | |||||| ||||||  || || | |||||||||||||||||||||| |||| |||||| ||||| |||    
T  27369 atgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaatcttttcaaaaa 27270  T
Q  177 a 177  Q
    |    
T  27269 a 27269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 1906 - 1819
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  1906 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 1819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 6121 - 6034
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  6121 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 10336 - 10249
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  10336 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 10249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 14551 - 14464
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  14551 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 14464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 18766 - 18679
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  18766 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 18679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 22981 - 22894
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  22981 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 22894  T

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Target: scaffold0135; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 27196 - 27109
Alignment:
Q  253 ttgcaatgtatgctatctaaggctactccatattctaaatgattcaacacaca--gttatagatgtaaaaatttgaaagaaactcttt 338  Q
    ||||| ||||||||| |||||||||  || | |||||||||| | ||||||||  |||||  ||||||||||| ||||||||||||||    
T  27196 ttgcattgtatgctacctaaggctatcccgtgttctaaatgagttaacacacacggttatgcatgtaaaaattggaaagaaactcttt 27109  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 774 - 872
Target Start/End: Original strand, 42312834 - 42312932
Alignment:
Q  774 cacagtggcatcaagtaagtcgactttgactacaaagataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatgtaagtggttt 872  Q
    ||||||||||||||||||| || ||| || |||| ||| | |||| |||| |||||| ||||||||||| |||| | ||||||| ||||  ||||||||    
T  42312834 cacagtggcatcaagtaagacgtcttcgattacagagagatcttcctgtcgaacaacacttgattctaatactcttgcttcatcgtatggcagtggttt 42312932  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 809 - 862
Target Start/End: Complemental strand, 43227307 - 43227254
Alignment:
Q  809 agataacttcatgtcaaacaacgcttgattctaaaactcctacttcatcctatg 862  Q
    ||||| |||| ||||||| ||| |||||||||||||||| | ||||||||||||    
T  43227307 agatatcttcctgtcaaagaacacttgattctaaaactcttgcttcatcctatg 43227254  T

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