View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4575_high_8 (Length: 264)

Name: NF4575_high_8
Description: NF4575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4575_high_8
NF4575_high_8
[»] chr6 (14 HSPs)
chr6 (1-246)||(25089334-25089579)
chr6 (3-105)||(10587880-10587982)
chr6 (11-104)||(26705220-26705313)
chr6 (12-103)||(19295276-19295367)
chr6 (17-107)||(21222456-21222546)
chr6 (11-103)||(13536753-13536845)
chr6 (1-106)||(10672611-10672715)
chr6 (11-113)||(10588063-10588165)
chr6 (16-107)||(19295478-19295569)
chr6 (11-98)||(13536560-13536647)
chr6 (24-65)||(10862217-10862258)
chr6 (42-98)||(10862013-10862069)
chr6 (11-98)||(25089152-25089239)
chr6 (11-63)||(28752277-28752329)
[»] chr8 (23 HSPs)
chr8 (1-106)||(12106859-12106964)
chr8 (1-111)||(21185844-21185954)
chr8 (11-106)||(10289390-10289484)
chr8 (16-102)||(22469429-22469515)
chr8 (1-102)||(21124541-21124642)
chr8 (1-98)||(25149238-25149335)
chr8 (11-102)||(23976086-23976178)
chr8 (16-103)||(18324194-18324281)
chr8 (13-104)||(21184293-21184384)
chr8 (26-81)||(37494332-37494387)
chr8 (11-104)||(12107027-12107120)
chr8 (11-107)||(4288913-4289009)
chr8 (26-102)||(23625177-23625253)
chr8 (28-98)||(22469641-22469711)
chr8 (16-65)||(35202796-35202845)
chr8 (52-96)||(37543803-37543847)
chr8 (40-107)||(25149459-25149526)
chr8 (11-58)||(22326446-22326493)
chr8 (11-61)||(22326598-22326648)
chr8 (16-98)||(22426847-22426928)
chr8 (16-98)||(23976287-23976368)
chr8 (33-114)||(31250295-31250376)
chr8 (11-98)||(18323999-18324084)
[»] chr2 (7 HSPs)
chr2 (11-103)||(32092754-32092846)
chr2 (11-103)||(24006875-24006967)
chr2 (1-103)||(22093042-22093144)
chr2 (44-99)||(31820170-31820225)
chr2 (11-65)||(32092919-32092973)
chr2 (11-79)||(22092879-22092947)
chr2 (11-99)||(24007072-24007160)
[»] chr4 (33 HSPs)
chr4 (16-103)||(22017877-22017964)
chr4 (1-103)||(10757565-10757667)
chr4 (1-103)||(10970736-10970838)
chr4 (11-105)||(47463807-47463901)
chr4 (1-103)||(37694895-37694997)
chr4 (1-102)||(2063328-2063429)
chr4 (11-80)||(55382596-55382665)
chr4 (16-102)||(5448393-5448479)
chr4 (33-98)||(30378952-30379017)
chr4 (1-105)||(5324676-5324780)
chr4 (1-99)||(18830574-18830671)
chr4 (1-103)||(30470813-30470915)
chr4 (4-98)||(30471003-30471097)
chr4 (11-103)||(12140662-12140754)
chr4 (11-101)||(2634021-2634111)
chr4 (26-104)||(11821934-11822012)
chr4 (34-100)||(18836278-18836344)
chr4 (1-105)||(2232365-2232469)
chr4 (23-98)||(55382760-55382835)
chr4 (4-98)||(22018035-22018129)
chr4 (17-98)||(9826830-9826911)
chr4 (16-80)||(1387297-1387361)
chr4 (11-67)||(3391199-3391255)
chr4 (11-63)||(18830766-18830818)
chr4 (11-98)||(47943640-47943727)
chr4 (28-98)||(5448196-5448266)
chr4 (28-98)||(29908889-29908959)
chr4 (46-98)||(47463916-47463968)
chr4 (16-98)||(2063146-2063228)
chr4 (23-65)||(10380633-10380675)
chr4 (11-60)||(8951058-8951107)
chr4 (11-72)||(18500790-18500851)
chr4 (28-65)||(18836488-18836525)
[»] chr3 (27 HSPs)
chr3 (1-99)||(26498547-26498645)
chr3 (13-103)||(33343198-33343288)
chr3 (1-102)||(15031402-15031503)
chr3 (23-102)||(38498307-38498386)
chr3 (1-103)||(11989040-11989142)
chr3 (11-97)||(14434641-14434727)
chr3 (11-98)||(26498708-26498795)
chr3 (24-102)||(15005163-15005241)
chr3 (16-103)||(43562604-43562693)
chr3 (1-105)||(21514926-21515030)
chr3 (4-98)||(1426484-1426578)
chr3 (11-101)||(20759119-20759209)
chr3 (4-98)||(39541674-39541768)
chr3 (1-67)||(39541792-39541858)
chr3 (11-107)||(15031179-15031275)
chr3 (11-98)||(20758959-20759046)
chr3 (4-111)||(33342993-33343100)
chr3 (13-98)||(38498135-38498220)
chr3 (1-65)||(48755510-48755574)
chr3 (11-98)||(21514744-21514831)
chr3 (11-98)||(48755327-48755414)
chr3 (16-98)||(33412204-33412286)
chr3 (17-98)||(18445405-18445486)
chr3 (17-98)||(41984905-41984986)
chr3 (11-98)||(43562792-43562879)
chr3 (1-65)||(1426657-1426721)
chr3 (22-98)||(42453043-42453119)
[»] chr7 (18 HSPs)
chr7 (11-107)||(27508768-27508864)
chr7 (1-101)||(43257261-43257361)
chr7 (1-101)||(15272320-15272420)
chr7 (11-104)||(3404648-3404741)
chr7 (11-96)||(5080111-5080196)
chr7 (22-101)||(15000849-15000928)
chr7 (26-99)||(45012848-45012921)
chr7 (1-101)||(36150998-36151098)
chr7 (21-105)||(38760987-38761070)
chr7 (11-95)||(43257424-43257508)
chr7 (1-100)||(14197457-14197556)
chr7 (11-98)||(38761184-38761271)
chr7 (4-98)||(27508577-27508670)
chr7 (23-99)||(5080313-5080389)
chr7 (11-99)||(45013063-45013151)
chr7 (11-65)||(6441378-6441432)
chr7 (28-98)||(15000645-15000716)
chr7 (13-78)||(37787707-37787772)
[»] chr5 (19 HSPs)
chr5 (11-109)||(21943732-21943830)
chr5 (1-96)||(21211419-21211514)
chr5 (1-101)||(17497177-17497277)
chr5 (24-111)||(13753216-13753303)
chr5 (1-105)||(20429870-20429974)
chr5 (11-103)||(30100609-30100701)
chr5 (23-103)||(31912191-31912271)
chr5 (16-103)||(10760003-10760090)
chr5 (11-105)||(2555631-2555725)
chr5 (17-98)||(19491870-19491951)
chr5 (1-100)||(43548954-43549053)
chr5 (22-96)||(10760210-10760284)
chr5 (44-99)||(34419676-34419731)
chr5 (40-98)||(30852586-30852644)
chr5 (45-98)||(2555439-2555492)
chr5 (1-50)||(12895708-12895757)
chr5 (22-98)||(13753432-13753508)
chr5 (23-63)||(21211603-21211643)
chr5 (24-64)||(30852796-30852836)
[»] scaffold0047 (2 HSPs)
scaffold0047 (15-103)||(11767-11855)
scaffold0047 (4-107)||(11597-11699)
[»] chr1 (10 HSPs)
chr1 (11-107)||(50335432-50335528)
chr1 (11-102)||(42847210-42847301)
chr1 (16-102)||(37608168-37608254)
chr1 (1-99)||(8097714-8097812)
chr1 (1-103)||(50335623-50335725)
chr1 (11-103)||(32373981-32374072)
chr1 (22-81)||(11633333-11633392)
chr1 (11-93)||(8097907-8097989)
chr1 (11-81)||(37607989-37608059)
chr1 (4-98)||(11633194-11633288)
[»] scaffold0407 (2 HSPs)
scaffold0407 (21-103)||(831-913)
scaffold0407 (21-103)||(7295-7377)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-102)||(190174-190275)
[»] scaffold1300 (2 HSPs)
scaffold1300 (17-107)||(1548-1637)
scaffold1300 (23-100)||(1355-1432)
[»] scaffold0018 (2 HSPs)
scaffold0018 (16-100)||(72108-72192)
scaffold0018 (11-63)||(71943-71995)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-100)||(24074-24172)
[»] scaffold0049 (1 HSPs)
scaffold0049 (11-92)||(59711-59792)
[»] scaffold0066 (2 HSPs)
scaffold0066 (23-98)||(15365-15440)
scaffold0066 (21-97)||(15562-15638)
[»] scaffold0039 (1 HSPs)
scaffold0039 (23-106)||(27481-27564)
[»] scaffold0024 (1 HSPs)
scaffold0024 (17-98)||(128002-128083)
[»] scaffold0026 (1 HSPs)
scaffold0026 (17-98)||(57647-57728)


Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25089334 - 25089579
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||||| |||||||||| | |||||||| |||||||||||||||||| |||||||||||||| |||||  |||||||| || |||||||||||||||    
T  25089334 accaacatagtctatattcaggaactgttttgcaatttctctgcattcagtgactaaagtgactattcattgtccattcagggactaaagtgactaattc 25089433  T
Q  101 cccaaaattaattatctaaattaaactgaaaattatcaatttataagttttatttttgttttccacaagaggtaatcctgttgaaggaaaaggtggaggt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25089434 cccaaaattaattatctaaattaaactgaaaattatcaatttataagttttatttttgttttccacaagaggtaatcctgttgaaggaaaaggtggaggt 25089533  T
Q  201 ctctttcatatattgatggtacaagtgtttatatataagaaattac 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25089534 ctctttcatatattgatggtacaagtgtttatatataagaaattac 25089579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 10587982 - 10587880
Alignment:
Q  3 caacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    ||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||  || |||||||||||||||||    
T  10587982 caacatagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttctcattcatggactaaagtgactaattccc 10587883  T
Q  103 caa 105  Q
    |||    
T  10587882 caa 10587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 26705220 - 26705313
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccca 104  Q
    |||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||  | |||||||||||||||||||    
T  26705220 tctacattcagggactgttttgcaatttctctacattcagggactaaagtgactactctttttccattcaggaactaaagtgactaattcccca 26705313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 19295367 - 19295276
Alignment:
Q  12 ctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||||| | |||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||  || ||||||||||||||||||    
T  19295367 ctatatttagggactgttttgcaatttctcagcattcagggactaaagtgactactcctttcctattcaaggactaaagtgactaattcccc 19295276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 21222546 - 21222456
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| |||||||  | |||||| |||||||||||||||    
T  21222546 ttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagttactaattccccaaaa 21222456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 13536753 - 13536845
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||| ||||| |||||||||| ||||||||||| |||||| ||||||||||||||||| |||| ||||||  || ||||||||||||||||||    
T  13536753 tctacattcagggactgttttgcaatttctctgtattcagagactaaagtgactactcctttctcattcaaggactaaagtgactaattcccc 13536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10672715 - 10672611
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||||| |||| ||||| ||||||||||| ||||| | |||||||   |||||||||||||||||||||| ||||||| ||||||| | ||||||||    
T  10672715 accaacatagtctacattcagggactgttttataatttttatgcattcgaagactaaagtgactactcatttctcattcagggattaaa-taactaattc 10672617  T
Q  101 cccaaa 106  Q
    ||||||    
T  10672616 cccaaa 10672611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 10588063 - 10588165
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaatta 110  Q
    |||| ||||| ||||| |||| |||||| |||||||||| ||||| ||||||| |||| ||||| |||||| || |||||||||||||  |||||||| |    
T  10588063 tctacattcatggactattttgcaatttatctgcattcatggacttaagtgacaactcctttcctattcagggactaaagtgactaatctcccaaaatca 10588162  T
Q  111 att 113  Q
    |||    
T  10588163 att 10588165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 19295478 - 19295569
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    ||||| ||||| ||||  ||||| ||||||||||||||||||||| || |||| ||| | ||||||||| |||||||||||||  |||||||    
T  19295478 attcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctattcagagactaaagtgactaatctcccaaaa 19295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 13536647 - 13536560
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| |||| |||||| |||||||||||| | |||||||||  ||| ||||| |||||| || |||||||||||||    
T  13536647 tctacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctattcagggactaaagtgactaat 13536560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 10862217 - 10862258
Alignment:
Q  24 actgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  10862217 actgttttgcaatttctctgcattcagggactaaagtaacta 10862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 10862069 - 10862013
Alignment:
Q  42 tgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||||||||||||||||||| |||| |||  |||||||||| |||| ||||||||    
T  10862069 tgcattcagggactaaagtgacgactccttttacattcagagactaaaatgactaat 10862013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 25089239 - 25089152
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| |||| |||||| ||||||||||| |||||||||| | |||| | ||| |||||  || |||||||||||||    
T  25089239 tctacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctattcatggactaaagtgactaat 25089152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 28752329 - 28752277
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgac 63  Q
    |||| ||||| ||||| |||| |||||| |||||||||||| |||||||||||    
T  28752329 tctacattcatggactattttgcaatttatctgcattcaggtactaaagtgac 28752277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12106964 - 12106859
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  12106964 accaacagagtctacatccagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgactaattc 12106865  T
Q  101 cccaaa 106  Q
    ||||||    
T  12106864 cccaaa 12106859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21185844 - 21185954
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||||||| | |||  ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  21185844 accaacagagtctatatttagggaacgtttttcaatttttcagcattcagggactaaagtgactactcatttctcattcagcgactaaagtgactaattc 21185943  T
Q  101 cccaaaattaa 111  Q
    ||||| |||||    
T  21185944 cccaatattaa 21185954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 10289390 - 10289484
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaa 106  Q
    |||| ||||| | |||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||| || ||||||||||||||||||||||||    
T  10289390 tctacattcaggaactgttttacaatttctctgcatttaggaactaa-gtgactactcattttccatttagggattaaagtgactaattccccaaa 10289484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 22469515 - 22469429
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    ||||| |||||||||| |||||||||| |||||||| || |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  22469515 attcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcccattcagggattaaagtgactaattccc 22469429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21124541 - 21124642
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||||||||||||||| |||||||||| |||||||| | |||||||||||||| |||| ||||||   | |||||||||||||||    
T  21124541 accaacagagtctacattcaaggactgttttgcaatttctctacattcaggaattaaagtgactactcctttctcattcaagaactaaagtgactaattc 21124640  T
Q  101 cc 102  Q
    ||    
T  21124641 cc 21124642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25149335 - 25149238
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||||| | |||| ||||| |||||||||| |||||||| |||||||||||| |||||||||||||| ||| |||||||| || |||| ||||||||    
T  25149335 accaacagagtctacattcagggactgttttgcaatttctttgcattcagggattaaagtgactactctttttccattcagggactaaaatgactaat 25149238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 23976178 - 23976086
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactac-tcatttcccattcagagattaaagtgactaattccc 102  Q
    |||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||| || ||| |||||||  || |||||||||||||||||    
T  23976178 tctacattcagggactgttttgcaatttctctgcattcaggaactaaagtgactacttctttttccattcaaggactaaagtgactaattccc 23976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 18324194 - 18324281
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||||   |||| ||||||| ||||||| ||| |||||||||    
T  18324194 attcatggactgttttgcaatttctctgcattcagggactaaaatgactacgtctttctcattcagggattaaaatgattaattcccc 18324281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 21184384 - 21184293
Alignment:
Q  13 tatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccca 104  Q
    |||||||| ||||| |||| |||||| ||||||||| ||||||| |||||| |||||||||| |||||| || |||||||||||||| ||||    
T  21184384 tatattcagggactattttgcaatttatctgcattcggggactagagtgacgactcatttcctattcagggactaaagtgactaatttccca 21184293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 37494387 - 37494332
Alignment:
Q  26 tgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcag 81  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37494387 tgttttacaatttctctgcattcagggactaaagtgactacttatttcctattcag 37494332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 12107027 - 12107120
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccca 104  Q
    |||| ||||| ||| | |||| |||||| |||||||||| ||||||||||||| |||  ||||| ||| ||||| |||||||||||||||||||    
T  12107027 tctacattcagggattattttgcaatttatctgcattcaaggactaaagtgacgacttctttcctatttagagactaaagtgactaattcccca 12107120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 4289009 - 4288913
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    |||| |||| |||| |||||| |||||||||| |||||| | |||||||||||||||  ||| ||| |||| || |||| |||||||||||||||||    
T  4289009 tctacattcgaggaatgttttgcaatttctctacattcatgaactaaagtgactactttttttccaatcagggactaaaatgactaattccccaaaa 4288913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 23625177 - 23625253
Alignment:
Q  26 tgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    ||||||||||||||||||||  ||  || |||||||||||||  ||||| ||||||||| |||||||||||||||||    
T  23625177 tgttttacaatttctctgcacccaaagattaaagtgactacttttttcctattcagagactaaagtgactaattccc 23625253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 22469641 - 22469711
Alignment:
Q  28 ttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||||||||| |||||||| | ||||||||||||| |||||||||  ||||| ||| |||||||||||||    
T  22469641 ttttacaatttatctgcatttaaggactaaagtgacgactcatttcttattcatagactaaagtgactaat 22469711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 35202796 - 35202845
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  35202796 attcagggactgttttgcaatttctctgcattcaggaactaaagtgacta 35202845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 37543847 - 37543803
Alignment:
Q  52 gactaaagtgactactcatttcccattcagagattaaagtgacta 96  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  37543847 gactaaagtgactactcattttccattcagagactaaagtgacta 37543803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 25149459 - 25149526
Alignment:
Q  40 tctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    ||||||||||| ||||| |||||| |||||||||| |||||| || |||||||||||||  |||||||    
T  25149459 tctgcattcagagactatagtgacgactcatttcctattcagggactaaagtgactaatctcccaaaa 25149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 22326493 - 22326446
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaa 58  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||||||    
T  22326493 tctacattcaaggactattttacaatttctcagcattcagagactaaa 22326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 22326598 - 22326648
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtg 61  Q
    |||||||| ||||| | ||||||||||| |||||||||| |||||||||||    
T  22326598 tctatatttaaggattattttacaatttatctgcattcaaggactaaagtg 22326648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 22426928 - 22426847
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||| ||||| |||| |||||| || ||||||| ||||||||||||  |||| ||||| |||||| || |||||||||||||    
T  22426928 attcagggactattttgcaatttatc-gcattcatggactaaagtgatgactcgtttcctattcagggactaaagtgactaat 22426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 23976287 - 23976368
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||| ||||| ||||||||||| ||| |||||||| |||||| |||| |||||||||  ||| || || |||||||||||||    
T  23976287 attcagggactattttacaatttatctacattcaggaactaaaatgacgactcatttcttattgag-gactaaagtgactaat 23976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 31250295 - 31250376
Alignment:
Q  33 caatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaattaatta 114  Q
    ||||||||||||||| || || |||||||||| ||| ||| ||||||||    |||||||| ||||||||||| ||| ||||    
T  31250295 caatttctctgcatttagagattaaagtgacttctccttttccattcaggagctaaagtgattaattccccaatatttatta 31250376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 18324084 - 18323999
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| ||||||||||| |||||||||| | |||||| |||| |  |||||||  ||||| || |||||||||||||    
T  18324084 tctacattcagggactattttacaatttatctgcattcatgaactaaaatgacga--catttcctgttcagcgactaaagtgactaat 18323999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 32092846 - 32092754
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  32092846 tctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgactaattcccc 32092754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 24006967 - 24006875
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||| |  ||||||||| |||||||    
T  24006967 tctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactaattttttcccattcagaaaccaaagtgactgattcccc 24006875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22093042 - 22093144
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||||  ||||||||| |||||||||| ||||||||||||||||| |||| |||||| ||||||||  | |||||||| ||||||    
T  22093042 accaacagaatctacattcagagactgttttgcaatttctctacattcagggactaaagtaactaatcattttccattcaggaactaaagtgattaattc 22093141  T
Q  101 ccc 103  Q
    |||    
T  22093142 ccc 22093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 31820170 - 31820225
Alignment:
Q  44 cattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    |||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  31820170 cattcatgaactaaagtgactacttatttcccattcagaaattaaagtgactaatt 31820225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32092919 - 32092973
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    |||| ||||| ||||| |||| |||||| ||||||||||||||||||||||||||    
T  32092919 tctacattcagggactatttttcaatttatctgcattcagggactaaagtgacta 32092973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 22092947 - 22092879
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattc 79  Q
    |||| ||||| ||||| ||||||||||| |||||| ||| ||||||||||||| |||| ||||| ||||    
T  22092947 tctacattcagggactattttacaatttatctgcaatcaaggactaaagtgacgactcctttcctattc 22092879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 24007072 - 24007160
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    |||| |||||| | || ||||||||||| |||| ||||| |||||||||| || |||||||||| | |||  ||  |||||||||||||    
T  24007072 tctacattcaaagtctattttacaatttatctgtattcaaggactaaagtaacgactcatttcctagtcaaggaccaaagtgactaatt 24007160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 22017964 - 22017877
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  22017964 attcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttcccattcagggattaaagtgactgattcccc 22017877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10757667 - 10757565
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||||| |||| || || |||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  10757667 accaacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaattc 10757568  T
Q  101 ccc 103  Q
    |||    
T  10757567 ccc 10757565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10970838 - 10970736
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||||| |||| || || |||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  10970838 accaacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaattc 10970739  T
Q  101 ccc 103  Q
    |||    
T  10970738 ccc 10970736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 47463901 - 47463807
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaa 105  Q
    |||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| |||||    
T  47463901 tctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatccagggactaaagtgactaatttcccaa 47463807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37694997 - 37694895
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||| || |||| || |||||||||||||||    
T  37694997 accaacacaatctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactccattctcactcagtgactaaagtgactaattc 37694898  T
Q  101 ccc 103  Q
    |||    
T  37694897 ccc 37694895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2063328 - 2063429
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| |||||| ||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||  || |||||||||||||||    
T  2063328 accaacagagtctacattcagggactgctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggactaaagtgactaattc 2063427  T
Q  101 cc 102  Q
    ||    
T  2063428 cc 2063429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 55382665 - 55382596
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattca 80  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  55382665 tctatattcaaggactgctttgcaatttctctgcattcacggactaaagtgactactcattttccattca 55382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 5448393 - 5448479
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| || ||| | |||||  || |||||||||||||||||    
T  5448393 attcagggactgttttgcaatttctctgcattcagggactaaagtgactattctttttcgattcacggagtaaagtgactaattccc 5448479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 30378952 - 30379017
Alignment:
Q  33 caatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  30378952 caatttctctgcattaagggactaaagtgactactcatttcctatttagagactaaagtgactaat 30379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5324780 - 5324676
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||||| ||||||||| |||||||||||||| ||| | |||||| |||||||| |||| ||||||| || |||||||||||| ||    
T  5324780 accaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgactaactc 5324681  T
Q  101 cccaa 105  Q
    |||||    
T  5324680 cccaa 5324676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18830671 - 18830574
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    ||||||| | |||| ||||| |||||||||  |||||| ||||||| |||| ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  18830671 accaacagaatctacattcagggactgtttagcaatttatctgcatccagg-actaaagtgactactcatttctcattcagggactaaagtgactaatt 18830574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30470915 - 30470813
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| || ||| ||| | ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||  | ||||| ||| |||||    
T  30470915 accaacaaatgctacatttagggagtgttttgcaatttctctgcattcaggaactaaagtgactactcatttcccgttcaggaactaaagagaccaattc 30470816  T
Q  101 ccc 103  Q
    |||    
T  30470815 ccc 30470813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 30471003 - 30471097
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||| ||||| ||||| ||||||||||| ||| |||||||| ||||||||||| |||| ||| | ||||||||| |||||||||||||    
T  30471003 aacatagtctacattcagggactattttacaatttatctacattcaggaactaaagtgacgactctttttctattcagagactaaagtgactaat 30471097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 12140754 - 12140662
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||||||| | |||||||||| |||||||| |||||||| ||| ||||||||| ||| ||||| |||| |  |||||||||||||||||||||    
T  12140754 tctatatttagggactgttttgcaatttctttgcattcaaggattaaagtgacgacttatttctcatttaaggattaaagtgactaattcccc 12140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 2634111 - 2634021
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcc 101  Q
    |||| ||||| |||||||||| ||||||||| |||||| | | ||||||||||||||| |||| ||||||  || ||||||||||||||||    
T  2634111 tctacattcagggactgttttgcaatttctcagcattcggcggctaaagtgactactcttttctcattcatggactaaagtgactaattcc 2634021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 11821934 - 11822012
Alignment:
Q  26 tgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccca 104  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||| |  || |||||| ||||||| ||||    
T  11821934 tgttttgcaatttctctgcattcagggactaaagtaagtactcatttcccattgaaggactaaagtaactaatttccca 11822012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 18836344 - 18836278
Alignment:
Q  34 aatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||| ||  ||| ||||||||||    
T  18836344 aatttatctgcattcagggactaaagtgactactcatttctcattcagggacaaaaatgactaattc 18836278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2232469 - 2232365
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||| | ||| |||||| ||||||||||  |||||||||||||| |||||||||||||  |||| ||  | |||||||||||||||    
T  2232469 accaacagaatctacattgagggattgttttgcaatttctctctattcagggactaaattgactactcatttttcatttaggaactaaagtgactaattc 2232370  T
Q  101 cccaa 105  Q
    |||||    
T  2232369 cccaa 2232365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 55382760 - 55382835
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| |||| |||||| |||||||||||||| ||||||||| |||||||||| |||||  || |||||||||||||    
T  55382760 gactattttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggactaaagtgactaat 55382835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 22018035 - 22018129
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||| ||||| ||||| |||| |||||| ||||||||||| ||| ||| |||| |||||||||| ||| || || |||||||||||||    
T  22018035 aacatagtctacattcagggactattttgcaatttatctgcattcagagacgaaaatgacgactcatttcctatttagggactaaagtgactaat 22018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 9826830 - 9826911
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||| ||||||||||||||||| | ||| |||||||||||| ||||  ||||||  | |||||||||||||    
T  9826830 ttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 9826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 1387361 - 1387297
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattca 80  Q
    |||||||||||| |||  |||||||||||||||| |||||||| ||||||||| |||| ||||||    
T  1387361 attcaaggactgctttgtaatttctctgcattcatggactaaaatgactactcttttctcattca 1387297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 3391199 - 3391255
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactact 67  Q
    |||| |||||| || |||||| |||||||||||||||||| ||||||||||||||||    
T  3391199 tctacattcaatgattgttttgcaatttctctgcattcagagactaaagtgactact 3391255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18830766 - 18830818
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgac 63  Q
    |||| ||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  18830766 tctacattcaaggactattttgcaatttatctgcattcagggactaaagtgac 18830818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 47943640 - 47943727
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| |||| |||||| |||||||| | ||||||||||||| |||||||||| |||||| || ||||  |||||||    
T  47943640 tctacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcctattcagggactaaaacgactaat 47943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 5448266 - 5448196
Alignment:
Q  28 ttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||||||||| ||||||||||||||||||| |||  |||| ||||| |||||| || ||||| |||||||    
T  5448266 ttttacaatttatctgcattcagggactaaaatgatgactcctttcctattcagggaataaagggactaat 5448196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 29908959 - 29908889
Alignment:
Q  28 ttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| |||||| ||||||| ||| |||||||||||| |||||||||| |||||  ||| ||||||||||||    
T  29908959 ttttgcaatttatctgcatccagtgactaaagtgacgactcatttcctattcaaggatcaaagtgactaat 29908889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 47463916 - 47463968
Alignment:
Q  46 ttcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||||||||||||||| |||||||||| ||||||  | |||||||||||||    
T  47463916 ttcagggactaaagtgacgactcatttcctattcaggaactaaagtgactaat 47463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 2063228 - 2063146
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||| ||||| ||||| |||||||||| | || |||||| | ||||||||||  ||||| || |||||||||||||    
T  2063228 attcaatgactattttataatttatctgcattcaagaaccaaagtgccgactcatttcctcttcagggactaaagtgactaat 2063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 10380675 - 10380633
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    ||||||||| ||||||||||||||||||  |||||||||||||    
T  10380675 gactgttttgcaatttctctgcattcagaaactaaagtgacta 10380633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 8951107 - 8951058
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagt 60  Q
    |||| |||||| ||||||||| |||||||| | |||||||||||||||||    
T  8951107 tctacattcaaagactgttttgcaatttctttacattcagggactaaagt 8951058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 18500790 - 18500851
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcattt 72  Q
    |||| ||||||| ||||||||||||||||||||||  || | | |||| |||||||||||||    
T  18500790 tctacattcaagaactgttttacaatttctctgcacccaagaattaaaatgactactcattt 18500851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 18836488 - 18836525
Alignment:
Q  28 ttttacaatttctctgcattcagggactaaagtgacta 65  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  18836488 ttttgcaatttttctgcattcagggactaaagtgacta 18836525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26498645 - 26498547
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    ||||||||  |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  26498645 accaacatggtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcttttcccattcagggactaaagtgactaatt 26498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 33343198 - 33343288
Alignment:
Q  13 tatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  33343198 tatattcaaggactgttttgcaatttctctgcattcagtaactaaaatgtctactcatttcccattcagggattaaagtgactaattcccc 33343288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15031402 - 15031503
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||| | |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  15031402 accaacaaagtctagatttagggactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggactaaagtgactaattc 15031501  T
Q  101 cc 102  Q
    ||    
T  15031502 cc 15031503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 38498307 - 38498386
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  38498307 gactattttgcaatttctatgcattcagggactaaagtgactactcctttctcattcagggattaaagtgactaattccc 38498386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11989142 - 11989040
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||  |||||| ||||| ||  |||||||||||| |    
T  11989142 accaacagagtctatattcagggactgttttgcaatttctctgcattcagagactaaagtgactacttctttccctttcagggacaaaagtgactaatac 11989043  T
Q  101 ccc 103  Q
    |||    
T  11989042 ccc 11989040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 14434727 - 14434641
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaa 97  Q
    |||| |||||||||||||||| |||| |||||||||| | ||||||||||||||| ||||||||||||||  |||||||||||||||    
T  14434727 tctacattcaaggactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccattcatggattaaagtgactaa 14434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 26498708 - 26498795
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||    
T  26498708 tctacattcatggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagagactaaagtgactaat 26498795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 15005163 - 15005241
Alignment:
Q  24 actgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    |||||||| |||||||||||||||||| |||||||||||| | ||||| ||||||||  ||||||||||||||||||||    
T  15005163 actgttttgcaatttctctgcattcagagactaaagtgaccagtcattacccattcaaggattaaagtgactaattccc 15005241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 43562693 - 43562604
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgac--tactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||||||||||||||| |||||||||||||||||  ||| ||| ||||  ||||| ||||||||||||||| ||||||||||||||||||    
T  43562693 attcaaggactgttttgcaatttctctgcattcaatgaccaaattgacattactcttttcccattcagagactaaagtgactaattcccc 43562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 21514926 - 21515030
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||| ||| |||| ||||| ||||||||||  ||||| ||| |||||| |||||||| ||||||||||||||| |||||| ||  ||||||||||||||    
T  21514926 accaatatagtctacattcagggactgttttgaaatttatctacattcaaggactaaaatgactactcatttccaattcagggacaaaagtgactaattc 21515025  T
Q  101 cccaa 105  Q
    |||||    
T  21515026 cccaa 21515030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 1426578 - 1426484
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||| ||||| | ||| |||| |||||| ||||||||||||  |||||||||| |||||||||| ||||||||| |||||||||||||    
T  1426578 aacataatctacattcaggaactattttgcaatttatctgcattcaggatctaaagtgacgactcatttcctattcagagactaaagtgactaat 1426484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 20759119 - 20759209
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcc 101  Q
    |||| ||||||||||| |||| ||||||||||||||||| |||||||| ||||||||| |||| ||||||| || ||||  ||||||||||    
T  20759119 tctacattcaaggactattttgcaatttctctgcattcaaggactaaaatgactactcctttctcattcagggactaaaacgactaattcc 20759209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 39541768 - 39541674
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||||| |||||  ||| |||||| ||||||||||| |||||||||||| |||||||||| |||||| || ||||| |||||||    
T  39541768 aacataatctatattcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcagtgactaaagcgactaat 39541674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39541792 - 39541858
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactact 67  Q
    ||||||| | |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  39541792 accaacagagtctacattcagagactgttttacaatttctctgcattcagggactaaagtgactact 39541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 15031275 - 15031179
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    |||| ||||| ||||| ||||||||||| |||||||||| ||||||||||||| |||| |||||||||||  || ||||||| |||||  |||||||    
T  15031275 tctacattcagggactattttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggactaaagtggctaatctcccaaaa 15031179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 20759046 - 20758959
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||||||||  |||| ||||||||||| |||| ||||| ||||||||||||| ||| |||||  |||||||||||||||||| ||||    
T  20759046 tctatattcagagactattttacaatttatctgtattcaaggactaaagtgacgacttatttcatattcagagattaaagtgattaat 20758959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 33343100 - 33342993
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||||| |||| ||||| ||||  |||  |||||| |||||||||||||||||||||||| |||||||| | |||||| || |||||||||||||  |||    
T  33343100 aacatagtctacattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaagtgactaatctccc 33343001  T
Q  104 aaaattaa 111  Q
    ||| ||||    
T  33343000 aaatttaa 33342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 38498220 - 38498135
Alignment:
Q  13 tatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| | ||||| |||| |||||| |||||||||||||||||||||||  |||||||| | ||||||||| |||| ||||||||    
T  38498220 tatatttatggactattttgcaatttatctgcattcagggactaaagtgatcactcattttctattcagagactaaactgactaat 38498135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48755510 - 48755574
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    ||||||| | |||| ||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  48755510 accaacagagtctacattcaggaactgttttgcaatttctctgcattcagggactaaagtgacta 48755574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 21514831 - 21514744
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||||| |||  |||   ||||| ||| |||||||||||||    
T  21514831 tctacattcaaggactattttacaatttatctgtattcagggactaaagtgacgacttcttttatattcaaagactaaagtgactaat 21514744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 48755414 - 48755327
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| |||| ||| || ||||||||||| |||||||||||| |||| ||||| |||||| || |||||||||||||    
T  48755414 tctacattcagggactattttgcaacttatctgcattcagagactaaagtgacgactcctttcctattcagggactaaagtgactaat 48755327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 33412286 - 33412204
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||||||||| ||||||||||| |||||||||   || ||||||||| | |||||||| ||||| ||| |||||||||||||    
T  33412286 attcaaggactattttacaatttatctgcattcgaagattaaagtgacgattcatttcctattcaaagactaaagtgactaat 33412204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 18445486 - 18445405
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||| ||||||||||||||||| | ||| |||||||||||| ||||  ||||||  | |||||||||||||    
T  18445486 ttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 18445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 41984986 - 41984905
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||| ||||||||||||||||| | ||| |||||||||||| ||||  ||||||  | |||||||||||||    
T  41984986 ttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttcttattcaggaactaaagtgactaat 41984905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 43562792 - 43562879
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||||||||| ||||||||||| |||||||||||  |||||| |||| | |||||||| ||| || || |||| ||||||||    
T  43562792 tctacattcaaggactattttacaatttatctgcattcagaaactaaaatgacgaatcatttcctattgagggactaaaatgactaat 43562879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1426657 - 1426721
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    ||||||| | |||| |||||  ||||||||| ||||||||||||||||||||| |||| ||||||    
T  1426657 accaacaaagtctacattcagtgactgttttgcaatttctctgcattcagggattaaaatgacta 1426721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 42453119 - 42453043
Alignment:
Q  22 ggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||| |||| |||||| | ||||||||  |||||||||||| |||||||| | |||||  ||||||||||||||||    
T  42453119 ggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattcaaggattaaagtgactaat 42453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 27508768 - 27508864
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    |||| ||||| |||||||||| |||||||||| | ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  27508768 tctacattcagggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgactaattccccaaaa 27508864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43257361 - 43257261
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||||  |||| ||||||||||||| |||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||    
T  43257361 accaacaaaatctacattcagagactcttttacaatttctatgcattcagggactaaggtgactattcattttccattcagggattaaagtgactaattc 43257262  T
Q  101 c 101  Q
    |    
T  43257261 c 43257261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15272420 - 15272320
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||  || |||||||||| ||||    
T  15272420 accaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgactcattc 15272321  T
Q  101 c 101  Q
    |    
T  15272320 c 15272320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 3404648 - 3404741
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccca 104  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||| ||| ||||| ||  | ||||||||||||| |||||    
T  3404648 tctacattcaaggactattttgcaatttctctgcattcagggcctaaagtgactactctttttccatttaggaactaaagtgactaatacccca 3404741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 5080196 - 5080111
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgacta 96  Q
    |||| |||||| ||||||||| || |||||||||||||||| |||||||||||||||  |||||||||||| || |||||||||||    
T  5080196 tctacattcaaagactgttttgcattttctctgcattcaggaactaaagtgactacttttttcccattcagggactaaagtgacta 5080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 15000849 - 15000928
Alignment:
Q  22 ggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcc 101  Q
    |||||||||| ||||| |||||||| ||  |||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  15000849 ggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtggctaattcc 15000928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 45012921 - 45012848
Alignment:
Q  26 tgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    |||||| |||||||| ||||||||| ||||||||||||||||| |||||||||||| ||  |||||||||||||    
T  45012921 tgttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagggaccaaagtgactaatt 45012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36150998 - 36151098
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| | |||||||| |||||||||  |||||| ||| |||||||||||||||||| |||| ||| || |||||||||||||||    
T  36150998 accaacaaagtctacattcaggtactgttttgcaatttctcaacattcaaggattaaagtgactactcattttccatccagggactaaagtgactaattc 36151097  T
Q  101 c 101  Q
    |    
T  36151098 c 36151098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 38761070 - 38760987
Alignment:
Q  21 aggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaa 105  Q
    ||||||||||| |||||||||| |||||| | |||||||||||||||  |||||||||||| || |||| |||||||||||||||    
T  38761070 aggactgttttgcaatttctctacattcacgaactaaagtgactacttctttcccattcagggactaaa-tgactaattccccaa 38760987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 43257424 - 43257508
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgact 95  Q
    |||||||||||||| | |||| |||||| |||||||||||||| ||||||||| |||||||| | |||||| |||| ||||||||    
T  43257424 tctatattcaaggattattttgcaatttatctgcattcagggattaaagtgacgactcattttctattcagggattgaagtgact 43257508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14197556 - 14197457
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||| | ||||||||| ||||||||||||||| |||||||||||||||||||  ||||||||| ||  | |||||||| ||||||    
T  14197556 accaacagaatctacattcgatgactgttttgcaatttctctgcatttagggactaaagtgactacttttttcccattgaggaactaaagtgattaattc 14197457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 38761184 - 38761271
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||  |||||||||| |||||| || |||||||| ||||    
T  38761184 tctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaaagtgattaat 38761271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 27508670 - 27508577
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||  |||||||||| |||||| || | |||||||||||    
T  27508670 aacatagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggact-aagtgactaat 27508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 5080313 - 5080389
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    |||| ||||||||||| ||||||||||||||||||| | || |||  ||||| ||||||||| ||||||||||||||    
T  5080313 gactattttacaatttatctgcattcagggactaaaataacgacttctttcctattcagagactaaagtgactaatt 5080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 45013063 - 45013151
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    |||||||||||||||| |||| |||||| | |||||||| |||||||| |||| |||| ||||| ||| || || ||||||||||||||    
T  45013063 tctatattcaaggactattttgcaatttatttgcattcaaggactaaactgacgactcttttcctattaagggactaaagtgactaatt 45013151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 6441432 - 6441378
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgacta 65  Q
    |||| ||||| |||||||||| |||||||| ||||||||||||||| ||||||||    
T  6441432 tctacattcagggactgttttgcaatttctttgcattcagggactatagtgacta 6441378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 15000716 - 15000645
Alignment:
Q  28 ttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagaga-ttaaagtgactaat 98  Q
    |||| |||||| |||||||||||||||||||||||| | || ||||| |||||| ||  |||||||||||||    
T  15000716 ttttgcaatttatctgcattcagggactaaagtgacaattcctttcctattcagggacctaaagtgactaat 15000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 37787772 - 37787707
Alignment:
Q  13 tatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccatt 78  Q
    ||||||||  |||||||||||||| |  ||| ||||||||||||||| |||||||| ||| |||||    
T  37787772 tatattcagagactgttttacaatcttcctgtattcagggactaaagggactactctttttccatt 37787707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 21943830 - 21943732
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaatt 109  Q
    |||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||| ||| ||||    
T  21943830 tctacattcaaggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgactaattctccataatt 21943732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21211514 - 21211419
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgacta 96  Q
    ||||||| | |||| |||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  21211514 accaacaaagtctacattcagagactgttttgcaatttttctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgacta 21211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17497177 - 17497277
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||  || |||||||||| ||||    
T  17497177 accaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgactcattc 17497276  T
Q  101 c 101  Q
    |    
T  17497277 c 17497277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 13753303 - 13753216
Alignment:
Q  24 actgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaattaa 111  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||| | ||| || || ||||||||||||||||||| ||||||    
T  13753303 actgttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggactaaagtgactaattccccataattaa 13753216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 20429974 - 20429870
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||||| ||||||||| |||||||||||||| ||| | |||||| |||||||| |||| ||||||| || |||||||||||| ||    
T  20429974 accaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgactaactc 20429875  T
Q  101 cccaa 105  Q
    |||||    
T  20429874 cccaa 20429870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 30100701 - 30100609
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||| |||||||||||||| |||| || | || || ||||||||||||||||||    
T  30100701 tctacattcaaggattgttttgcaatttctctgcatttagggattaaagtgactactcttttctcacttagggactaaagtgactaattcccc 30100609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 31912271 - 31912191
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||||||||||||| |||||||||||||||| |||| |||||| || |||||||||||  || ||||||||||||||||||    
T  31912271 gactgttttacaatgtctctgcattcagggattaaaatgactattcttttcccattcaaggactaaagtgactaattcccc 31912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 10760090 - 10760003
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||| |||||||||| |||||||||| |||||||| ||||||||| |||||||||| ||| |||| ||  |||||||||||||||||    
T  10760090 attcagggactgtttttcaatttctctacattcaggaactaaagtggctactcattttccactcagggaccaaagtgactaattcccc 10760003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 2555631 - 2555725
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaa 105  Q
    |||| ||||| |||||||||| |||||| |||||||| || ||||||||| |||| | ||||||||||||| || ||| ||||||||||||||||    
T  2555631 tctacattcagggactgttttgcaatttttctgcatttagagactaaagtaactaattatttcccattcagggactaacgtgactaattccccaa 2555725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 19491870 - 19491951
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||| ||||||||||||||||| ||||| |||||||||||| |||| |||||||  | |||||||||||||    
T  19491870 ttcaagcactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgactaat 19491951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43548954 - 43549053
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||||| |||| ||||| | |||||||| ||||||||||||| ||| ||||||||||||||| |   ||  |||||||||| |||||||||||||||    
T  43548954 accaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtgactatttccttttcattcagagactaaagtgactaattc 43549053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 10760210 - 10760284
Alignment:
Q  22 ggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgacta 96  Q
    ||||| |||| |||||| ||||||||||| ||||||||||||  ||||||||| |||||| ||||||||||||||    
T  10760210 ggactattttgcaatttatctgcattcagagactaaagtgacggctcatttcctattcagggattaaagtgacta 10760284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 34419676 - 34419731
Alignment:
Q  44 cattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    ||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||    
T  34419676 cattcagggactaaagtgactactcctttctcattcaaggattaaagtgactaatt 34419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 30852644 - 30852586
Alignment:
Q  40 tctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||||||||||||||||| ||| |||||| |||||  || |||||||||||||    
T  30852644 tctgtattcagggactaaagtgacgacttatttcctattcaaggactaaagtgactaat 30852586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 2555492 - 2555439
Alignment:
Q  45 attcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||||||||||||| || |||||||||| | ||||||  |||||||||||||    
T  2555492 attcagggactaaagttacgactcatttcctactcagaggctaaagtgactaat 2555439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12895708 - 12895757
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcag 50  Q
    ||||||| | |||| |||||| ||||||||| ||||||||||||||||||    
T  12895708 accaacaaaatctacattcaacgactgttttgcaatttctctgcattcag 12895757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 13753432 - 13753508
Alignment:
Q  22 ggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    ||||| |||| |||||| ||||||||||| ||||||| |||| |||  ||||| ||| || || |||||||||||||    
T  13753432 ggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggactaaagtgactaat 13753508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 21211603 - 21211643
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgac 63  Q
    |||| |||| |||||| ||||||||||||||||||||||||    
T  21211603 gactattttgcaatttatctgcattcagggactaaagtgac 21211643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 30852796 - 30852836
Alignment:
Q  24 actgttttacaatttctctgcattcagggactaaagtgact 64  Q
    |||||||| |||||||||| ||||||| |||||||||||||    
T  30852796 actgttttgcaatttctctccattcagtgactaaagtgact 30852836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 11767 - 11855
Alignment:
Q  15 tattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||    
T  11767 tatttaaggactattttgcaatttctctgcattcagggactaaagcgactactcatttcccattcagaaactaaagtgattaattcccc 11855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 11699 - 11597
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||||| |||| ||||| ||||| ||||||||||| |||||||| ||| |||||| | || |||||||||| |||||| || |||||||||||||  |||    
T  11699 aacatagtctacattcagggactattttacaatttatctgcatttagg-actaaaataacgactcatttcctattcagtgactaaagtgactaatctccc 11601  T
Q  104 aaaa 107  Q
    ||||    
T  11600 aaaa 11597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 50335528 - 50335432
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||  |||||||    
T  50335528 tctacattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtgactaatctcccaaaa 50335432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 42847210 - 42847301
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||  ||||| || |||||| |||||||||||||||||    
T  42847210 tctacattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttttcctatccagagactaaagtgactaattccc 42847301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 37608168 - 37608254
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccc 102  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||  || |||||||||||| ||||    
T  37608168 attcagggactgttttgcaatttctctgcattcagggactaaaatgactactcctttcccattcaaggactaaagtgactaactccc 37608254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8097812 - 8097714
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaatt 99  Q
    ||||||||| |||||||| |  ||||||||| ||||||||||||||| ||  ||||||||| ||||| ||||| |||||||||| ||||||||||||||    
T  8097812 accaacatagtctatatttagagactgttttgcaatttctctgcatttagaaactaaagtggctactaatttctcattcagagactaaagtgactaatt 8097714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 50335623 - 50335725
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| |||||||||| |||||| |||||||||||||| |||||||||||||  ||| |||||| | || |||||||||||||||    
T  50335623 accaacagagtctacattcagggactgttttgcaatttgtctgcattcagggattaaagtgactactttttttccattctgggactaaagtgactaattc 50335722  T
Q  101 ccc 103  Q
    |||    
T  50335723 ccc 50335725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 32374072 - 32373981
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    |||| ||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||| ||||| |||||| || |||| |||||||||||||    
T  32374072 tctacattcaagaactgttttgcaaattctatgcatccagggactaaagtgactactc-tttcctattcagggactaaaatgactaattcccc 32373981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 11633333 - 11633392
Alignment:
Q  22 ggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcag 81  Q
    |||||||| |||||||||||| |||||||| |||||| ||||||||||||| ||||||||    
T  11633333 ggactgttatacaatttctctacattcaggaactaaaatgactactcattttccattcag 11633392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 8097907 - 8097989
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtga 93  Q
    |||||||||| ||||| ||||   |||| |||||||||||||||||||||||  |||||||||| ||| || || ||||||||    
T  8097907 tctatattcatggactattttgtgatttatctgcattcagggactaaagtgaaaactcatttcctatttagggactaaagtga 8097989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 37608059 - 37607989
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcag 81  Q
    |||| ||||||||||| |||| |||||| | ||||||||||||||||| |||| | |||||||| ||||||    
T  37608059 tctacattcaaggactattttgcaatttatatgcattcagggactaaaatgacaattcatttcctattcag 37607989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 11633288 - 11633194
Alignment:
Q  4 aacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||| ||||| | ||| ||||||||||| ||||| |||| | || |||||||| |||  ||||| |||||  ||||||||||||||||    
T  11633288 aacataatctacattcatgaactattttacaatttatctgctttcaagaaccaaagtgacgacttctttcctattcatggattaaagtgactaat 11633194  T

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Target: scaffold0407 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 913 - 831
Alignment:
Q  21 aggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||| | ||||||||| ||||||||    
T  913 aggactgttttgcaatttctctgcattcagggactaaagtgacttctctttttccattcagaaactaaagtgaccaattcccc 831  T

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Target: scaffold0407; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 7377 - 7295
Alignment:
Q  21 aggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattcccc 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||| | ||||||||| ||||||||    
T  7377 aggactgttttgcaatttctctgcattcagggactaaagtgacttctctttttccattcagaaactaaagtgaccaattcccc 7295  T

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Target: scaffold0011 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 190275 - 190174
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| |||||  ||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||| || |||| ||||||||||    
T  190275 accaacagagtctacattcagagactgttttgcaatttctctgcattcagagactaaaatgactactcttttcccattcagggactaaaatgactaattc 190176  T
Q  101 cc 102  Q
    ||    
T  190175 cc 190174  T

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Target: scaffold1300 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 1548 - 1637
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaaa 107  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| |||||||  | |||||||||||| |||||||||    
T  1548 ttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgactaa-tccccaaaa 1637  T

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Target: scaffold1300; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 1432 - 1355
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    |||| |||| |||||| |||||||| ||||||||||||||  | | |||||| |||||  || |||||||||||||||    
T  1432 gactattttgcaatttatctgcatttagggactaaagtgataatttatttcctattcaaggactaaagtgactaattc 1355  T

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Target: scaffold0018 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 72108 - 72192
Alignment:
Q  16 attcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||| |||||||||| ||||||||   ||||||||||||||||||||||||  |||||||||||| || |||||||||||||||    
T  72108 attcagggactgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggactaaagtgactaattc 72192  T

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Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 71995 - 71943
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgac 63  Q
    |||||||||| ||||| |||| |||||| |||||||||||||| |||||||||    
T  71995 tctatattcagggactattttgcaatttatctgcattcagggattaaagtgac 71943  T

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Target: scaffold0102 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 24074 - 24172
Alignment:
Q  1 accaacatattctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattc 100  Q
    ||||||| | |||| ||||| ||| |||||| ||||||||||||||||||||||||||   ||||||| ||| |||||||| ||||||||||||||||||    
T  24074 accaacagaatctacattcagggattgttttgcaatttctctgcattcagggactaaaacaactactc-ttttccattcagggattaaagtgactaattc 24172  T

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Target: scaffold0049 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 59792 - 59711
Alignment:
Q  11 tctatattcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtg 92  Q
    |||| ||||| || ||||||| |||||||||||||||||||||||||||||||||| | ||||||||| || || |||||||    
T  59792 tctacattcaggggctgttttgcaatttctctgcattcagggactaaagtgactacacctttcccattgagggactaaagtg 59711  T

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Target: scaffold0066 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 15440 - 15365
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||| ||||||||||| |||||||||| ||||||||||||| |||||||||  ||||| ||| |||||||||||||    
T  15440 gactattttacaatttatctgcattcaaggactaaagtgacaactcatttctaattcaaagactaaagtgactaat 15365  T

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Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 15562 - 15638
Alignment:
Q  21 aggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaa 97  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||| ||  | |||||||||  || |||||| |||||    
T  15562 aggactgttttgcaatttctctgcattcagagactaaattgacttctattctcccattcatggactaaagtcactaa 15638  T

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Target: scaffold0039 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 27564 - 27481
Alignment:
Q  23 gactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaattccccaaa 106  Q
    ||||||||| ||||||||| | |||||||| ||||||| ||||||||||| | |||||| || |||||||||||||||| ||||    
T  27564 gactgttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggactaaagtgactaattcctcaaa 27481  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 128002 - 128083
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||| ||||||||||||||||| | ||| |||||||||||| ||||  ||||||  | |||||||||||||    
T  128002 ttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 128083  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 57647 - 57728
Alignment:
Q  17 ttcaaggactgttttacaatttctctgcattcagggactaaagtgactactcatttcccattcagagattaaagtgactaat 98  Q
    |||||| |||||||| ||||||||||||||| | | ||| |||||||||||| ||||  ||||||  | |||||||||||||    
T  57647 ttcaagcactgttttgcaatttctctgcattaaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 57728  T

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