View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4575_low_9 (Length: 256)

Name: NF4575_low_9
Description: NF4575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4575_low_9
NF4575_low_9
[»] chr6 (19 HSPs)
chr6 (8-240)||(25089121-25089353)
chr6 (1-212)||(13536557-13536769)
chr6 (1-212)||(19295352-19295563)
chr6 (1-212)||(10672689-10672898)
chr6 (1-209)||(21222536-21222746)
chr6 (71-212)||(10588012-10588153)
chr6 (23-179)||(10862043-10862199)
chr6 (41-172)||(12651194-12651324)
chr6 (1-138)||(26705099-26705236)
chr6 (106-209)||(10587887-10587990)
chr6 (118-209)||(13536749-13536840)
chr6 (106-209)||(19295281-19295384)
chr6 (106-209)||(25089328-25089431)
chr6 (106-209)||(26705204-26705307)
chr6 (114-172)||(28752279-28752337)
chr6 (106-209)||(21222465-21222568)
chr6 (32-116)||(26705089-26705173)
chr6 (1-52)||(10587958-10588009)
chr6 (120-171)||(10862202-10862253)
[»] chr7 (25 HSPs)
chr7 (1-210)||(27508576-27508784)
chr7 (14-212)||(38761076-38761274)
chr7 (21-178)||(14197550-14197707)
chr7 (1-172)||(6441416-6441586)
chr7 (1-209)||(5080180-5080388)
chr7 (1-212)||(15000642-15000854)
chr7 (64-212)||(36150845-36150993)
chr7 (8-191)||(37787765-37787944)
chr7 (14-141)||(45012932-45013059)
chr7 (64-218)||(43257366-43257520)
chr7 (2-209)||(3404458-3404663)
chr7 (106-206)||(15272326-15272426)
chr7 (8-92)||(43257342-43257426)
chr7 (108-209)||(3404634-3404735)
chr7 (8-92)||(36150933-36151017)
chr7 (106-209)||(27508752-27508855)
chr7 (111-217)||(29934448-29934554)
chr7 (119-209)||(45013060-45013150)
chr7 (106-207)||(5080111-5080212)
chr7 (106-209)||(15000822-15000925)
chr7 (106-172)||(6441382-6441447)
chr7 (106-209)||(36150992-36151095)
chr7 (102-160)||(21658689-21658747)
chr7 (139-209)||(45012849-45012919)
chr7 (97-149)||(4617279-4617331)
[»] chr3 (46 HSPs)
chr3 (8-212)||(48755324-48755529)
chr3 (44-212)||(1426481-1426649)
chr3 (1-212)||(33343003-33343212)
chr3 (41-212)||(15031185-15031356)
chr3 (1-212)||(21514741-21514952)
chr3 (64-218)||(26498650-26498804)
chr3 (1-205)||(44967859-44968063)
chr3 (41-212)||(43562711-43562882)
chr3 (1-178)||(11989116-11989293)
chr3 (1-138)||(15031291-15031428)
chr3 (1-172)||(18445476-18445647)
chr3 (1-144)||(14434711-14434854)
chr3 (8-142)||(15005025-15005159)
chr3 (103-212)||(42453040-42453149)
chr3 (1-151)||(26920213-26920363)
chr3 (110-212)||(39541671-39541773)
chr3 (67-216)||(38498128-38498277)
chr3 (8-161)||(26840039-26840190)
chr3 (106-209)||(15031396-15031499)
chr3 (1-99)||(26498619-26498717)
chr3 (106-172)||(48755504-48755570)
chr3 (21-118)||(36383089-36383186)
chr3 (106-209)||(15005134-15005237)
chr3 (106-209)||(26498548-26498651)
chr3 (106-172)||(11989082-11989148)
chr3 (64-212)||(20758956-20759104)
chr3 (106-210)||(41984904-41985008)
chr3 (8-85)||(38498227-38498304)
chr3 (106-210)||(18445404-18445508)
chr3 (106-169)||(20759103-20759166)
chr3 (125-212)||(33412201-33412288)
chr3 (106-209)||(38498279-38498382)
chr3 (63-213)||(7300152-7300301)
chr3 (2-84)||(20759052-20759134)
chr3 (106-172)||(39541786-39541852)
chr3 (106-209)||(21514920-21515023)
chr3 (106-209)||(33343180-33343283)
chr3 (106-208)||(14434641-14434743)
chr3 (106-172)||(44968031-44968096)
chr3 (106-171)||(26920331-26920396)
chr3 (106-161)||(1426651-1426706)
chr3 (32-106)||(43562734-43562808)
chr3 (1-74)||(41984976-41985049)
chr3 (41-85)||(1426576-1426620)
chr3 (21-85)||(7300142-7300206)
chr3 (67-131)||(36383108-36383172)
[»] chr1 (12 HSPs)
chr1 (1-212)||(50335438-50335649)
chr1 (21-212)||(37607970-37608160)
chr1 (1-178)||(13735476-13735654)
chr1 (10-204)||(8097795-8097989)
chr1 (56-172)||(32374092-32374201)
chr1 (96-212)||(11633191-11633307)
chr1 (106-172)||(50335617-50335683)
chr1 (106-209)||(32373986-32374088)
chr1 (115-169)||(13735631-13735685)
chr1 (124-208)||(37608165-37608249)
chr1 (106-209)||(8097715-8097818)
chr1 (110-209)||(42847198-42847297)
[»] chr5 (27 HSPs)
chr5 (1-218)||(2555430-2555647)
chr5 (1-207)||(10760079-10760284)
chr5 (14-212)||(13753313-13753511)
chr5 (1-212)||(30852583-30852787)
chr5 (2-152)||(17497052-17497202)
chr5 (1-172)||(19491709-19491880)
chr5 (5-210)||(21943818-21944023)
chr5 (2-179)||(34419510-34419687)
chr5 (14-189)||(19564739-19564914)
chr5 (3-153)||(11298015-11298165)
chr5 (27-161)||(30100708-30100842)
chr5 (1-151)||(20429948-20430098)
chr5 (26-206)||(31912292-31912472)
chr5 (106-207)||(21211419-21211520)
chr5 (106-206)||(17497171-17497271)
chr5 (106-209)||(21943743-21943846)
chr5 (106-210)||(19491848-19491952)
chr5 (71-158)||(12895579-12895666)
chr5 (106-209)||(13753229-13753332)
chr5 (8-99)||(21211495-21211585)
chr5 (106-171)||(2555615-2555680)
chr5 (106-208)||(20429878-20429980)
chr5 (135-172)||(21211604-21211641)
chr5 (27-99)||(32539365-32539436)
chr5 (106-181)||(10760036-10760111)
chr5 (106-172)||(43548948-43549014)
chr5 (128-172)||(30852789-30852833)
[»] chr8 (34 HSPs)
chr8 (1-212)||(25149309-25149520)
chr8 (1-211)||(22469504-22469713)
chr8 (23-209)||(37543885-37544071)
chr8 (1-211)||(23976162-23976370)
chr8 (1-160)||(18324046-18324205)
chr8 (41-212)||(21124324-21124495)
chr8 (2-217)||(22326478-22326692)
chr8 (60-211)||(22426845-22426995)
chr8 (21-169)||(35202638-35202787)
chr8 (2-131)||(31253984-31254111)
chr8 (73-209)||(21184299-21184434)
chr8 (1-189)||(24609097-24609285)
chr8 (26-160)||(41358778-41358912)
chr8 (54-143)||(29585574-29585663)
chr8 (26-159)||(4289021-4289154)
chr8 (64-209)||(12106969-12107114)
chr8 (1-138)||(21124430-21124567)
chr8 (106-209)||(12106867-12106970)
chr8 (106-172)||(23976128-23976194)
chr8 (16-85)||(37494395-37494464)
chr8 (106-210)||(25149237-25149341)
chr8 (106-209)||(21124535-21124638)
chr8 (10-77)||(21185794-21185861)
chr8 (106-209)||(22469433-22469536)
chr8 (1-99)||(12106938-12107036)
chr8 (102-172)||(23625071-23625141)
chr8 (106-169)||(22326446-22326509)
chr8 (106-172)||(35202775-35202841)
chr8 (106-169)||(18324173-18324236)
chr8 (64-138)||(31254007-31254081)
chr8 (75-120)||(37494422-37494467)
chr8 (24-131)||(10289279-10289383)
chr8 (118-158)||(10289386-10289426)
chr8 (59-99)||(22426924-22426964)
[»] chr4 (49 HSPs)
chr4 (1-172)||(18830645-18830816)
chr4 (1-212)||(2634095-2634306)
chr4 (41-215)||(55382667-55382841)
chr4 (1-210)||(5448195-5448404)
chr4 (21-212)||(10380686-10380877)
chr4 (21-212)||(30470909-30471100)
chr4 (21-172)||(18836370-18836521)
chr4 (32-211)||(37695034-37695213)
chr4 (1-211)||(2063144-2063354)
chr4 (2-212)||(47943520-47943730)
chr4 (8-178)||(11821754-11821924)
chr4 (64-212)||(22017984-22018132)
chr4 (1-172)||(9826669-9826840)
chr4 (64-211)||(29908887-29909034)
chr4 (1-151)||(5324754-5324904)
chr4 (42-161)||(3370013-3370132)
chr4 (23-172)||(30378779-30378927)
chr4 (1-125)||(10757641-10757765)
chr4 (1-125)||(10970812-10970936)
chr4 (10-138)||(47144760-47144888)
chr4 (41-212)||(1387453-1387625)
chr4 (1-131)||(37694971-37695101)
chr4 (21-172)||(2232463-2232612)
chr4 (21-214)||(18500594-18500786)
chr4 (41-132)||(1387389-1387480)
chr4 (115-209)||(47463814-47463908)
chr4 (71-212)||(8951129-8951270)
chr4 (106-209)||(2063322-2063425)
chr4 (1-100)||(12140738-12140837)
chr4 (106-209)||(18830575-18830677)
chr4 (106-172)||(5448372-5448438)
chr4 (41-106)||(3370036-3370101)
chr4 (108-209)||(10757570-10757671)
chr4 (108-209)||(10970741-10970842)
chr4 (67-212)||(12140772-12140917)
chr4 (157-218)||(47463916-47463977)
chr4 (106-210)||(9826808-9826912)
chr4 (106-206)||(22017885-22017985)
chr4 (27-99)||(29908967-29909039)
chr4 (62-133)||(1387442-1387513)
chr4 (105-172)||(37694937-37695004)
chr4 (106-172)||(3391183-3391249)
chr4 (106-209)||(2634024-2634127)
chr4 (106-208)||(5324684-5324786)
chr4 (21-99)||(22017973-22018051)
chr4 (1-85)||(8951091-8951175)
chr4 (65-138)||(10757673-10757746)
chr4 (65-138)||(10970844-10970917)
chr4 (140-209)||(30378948-30379017)
[»] scaffold0102 (2 HSPs)
scaffold0102 (8-212)||(23889-24093)
scaffold0102 (106-169)||(24068-24131)
[»] chr2 (15 HSPs)
chr2 (1-169)||(39598578-39598746)
chr2 (21-172)||(31499441-31499592)
chr2 (8-190)||(22092879-22093061)
chr2 (8-221)||(31819903-31820115)
chr2 (65-172)||(32092862-32092969)
chr2 (1-209)||(24006951-24007159)
chr2 (44-156)||(8219193-8219304)
chr2 (108-209)||(32092759-32092860)
chr2 (1-99)||(32092830-32092928)
chr2 (106-172)||(24006917-24006983)
chr2 (106-207)||(31820090-31820191)
chr2 (32-100)||(8219216-8219284)
chr2 (109-209)||(22093039-22093139)
chr2 (7-85)||(17914097-17914175)
chr2 (106-159)||(17914149-17914202)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-161)||(314126-314273)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-172)||(57486-57657)
scaffold0026 (106-210)||(57625-57729)
[»] scaffold0066 (2 HSPs)
scaffold0066 (58-212)||(15362-15516)
scaffold0066 (139-208)||(15569-15638)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-172)||(127841-128012)
scaffold0024 (106-210)||(127980-128084)
[»] scaffold1300 (2 HSPs)
scaffold1300 (1-209)||(1357-1558)
scaffold1300 (106-210)||(1526-1630)
[»] scaffold0407 (6 HSPs)
scaffold0407 (32-172)||(969-1109)
scaffold0407 (32-172)||(7433-7573)
scaffold0407 (8-138)||(913-1043)
scaffold0407 (8-138)||(7377-7507)
scaffold0407 (106-172)||(873-938)
scaffold0407 (106-172)||(7337-7402)
[»] scaffold0011 (2 HSPs)
scaffold0011 (8-212)||(190256-190459)
scaffold0011 (106-209)||(190178-190281)
[»] scaffold0047 (2 HSPs)
scaffold0047 (67-212)||(11603-11747)
scaffold0047 (106-209)||(11749-11850)
[»] scaffold0039 (3 HSPs)
scaffold0039 (14-111)||(27573-27670)
scaffold0039 (106-209)||(27489-27592)
scaffold0039 (136-209)||(27682-27755)
[»] scaffold0049 (3 HSPs)
scaffold0049 (106-172)||(59742-59808)
scaffold0049 (64-112)||(59807-59855)
scaffold0049 (8-80)||(59783-59855)
[»] scaffold0018 (2 HSPs)
scaffold0018 (64-212)||(71906-72059)
scaffold0018 (1-83)||(72008-72090)


Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 25089353 - 25089121
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25089353 tgaatatagactatgttggtcaatttcatggactaaagtgactaatgaagtctacattcagggactaaattgactaatggagtctgcattcaatgactaa 25089254  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  25089253 attgactaacagagtctacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctattcatggactaaagtgacta 25089154  T
Q  208 atctctcaattaatttttaggtacccgtttcat 240  Q
    |||||||||||||||||||||||||||||||||    
T  25089153 atctctcaattaatttttaggtacccgtttcat 25089121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 13536769 - 13536557
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcaggga-ctaaattgactaacggagtctgcattca 99  Q
    |||||| ||||| |||||| | |||||| |||||| ||| ||||||||||||   |||||||||||||||  ||||||||||||||||||||||||||||    
T  13536769 cagtccctgaatgtagactctattggtccatttcagggactaaagtgactaacagagtctacattcagggggctaaattgactaacggagtctgcattca 13536670  T
Q  100 atgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaa 199  Q
      |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||| || ||| | ||||||||| | |||||    
T  13536669 gggactaaattgactaacagagtctacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctattcagggactaa 13536570  T
Q  200 agtgactaatctc 212  Q
    |||||||||||||    
T  13536569 agtgactaatctc 13536557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 19295352 - 19295563
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| | ||||||| ||||||| |||||||||| ||| ||||||||| || | ||||||||||||||||||||||||||||| | ||||||||||||     
T  19295352 cagtccctaaatataggctatgttagtcaatttcagggactaaagtgaccaacggagtctacattcagggactaaattgactaatgaagtctgcattcag 19295451  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||  |||||| | | |||||||   ||||||    
T  19295452 ggactaaattgactaacagagtctgcattcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctattcagagactaaa 19295551  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  19295552 gtgactaatctc 19295563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 10672689 - 10672898
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||||||||||| ||||||| | | || ||||||||| ||||||||||||||||||||||||||||||||| | | ||||||||     
T  10672689 cagtccctgaatgtagactatgttggtaaatttcaggaactatagtgactaacgaagtctacattcagggactaaattgactaacgaaatatgcattcag 10672788  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |    |||||| |||||||||  |||||||    
T  10672789 agactaaattgattaaca-aatctacattcaggaactattttgcaatttatctgcattcaaagactaaaataataactcatttcctattcagaaactaaa 10672887  T
Q  201 gtgactaatctc 212  Q
     |||||||||||    
T  10672888 -tgactaatctc 10672898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21222536 - 21222746
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||||||||  |||||| |||| |||||||||| ||||||| ||||||||   ||||||||||||||||||||||||||||||| ||||||||||||     
T  21222536 cagtccttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctacattcagggactaaattgactaacgaagtctgcattcag 21222635  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatc--tgcattcagagactaaagtggcgactcatctcctattcatgaacta 198  Q
     |||||| |||||||||| ||| |||||||||  ||||||||||||||||||  | ||||||| |||||||||| ||| |  | ||||||||| | || |    
T  21222636 agactaagttgactaacatagtatacattcagagactattttgcaatttatctatacattcagggactaaagtgacgatttctttcctattcagggacca 21222735  T
Q  199 aagtgactaat 209  Q
    |||||||||||    
T  21222736 aagtgactaat 21222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 71 - 212
Target Start/End: Original strand, 10588012 - 10588153
Alignment:
Q  71 actaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaag 170  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||||  |||| |||    
T  10588012 actaaattgactaacggagtctgcattcaaggactaaattgactaataaagtctacattcatggactattttgcaatttatctgcattcatggacttaag 10588111  T
Q  171 tggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    || | |||| | ||||||||| | ||||||||||||||||||    
T  10588112 tgacaactcctttcctattcagggactaaagtgactaatctc 10588153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 10862199 - 10862043
Alignment:
Q  23 ttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagt 122  Q
    ||||||||||||| ||| ||||||||| ||   |||||| |||||||||||||||||||||||||||||||| ||||  || | ||||||||||||||||    
T  10862199 ttggtcaatttcagggactaaagtgacgaacagagtctatattcagggactaaattgactaacggagtctgccttcagggattgaattgactaacagagt 10862100  T
Q  123 ctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactc 179  Q
    ||||||||||| ||||  |||||||| || ||||||||| |||||||||| ||||||    
T  10862099 ctacattcagggactacattgcaattaatttgcattcagggactaaagtgacgactc 10862043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 12651194 - 12651324
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactatt 140  Q
    ||||||||||||  |||||||||| ||| |||||||||||||||| ||||| |||||||  ||| |||||||||||| ||||||| |||||   | ||||    
T  12651194 taaagtgactaacaaagtctacat-cagagactaaattgactaacagagtcggcattcagggaccaaattgactaacggagtctatattcaaagattatt 12651292  T
Q  141 ttgcaatttatctgcattcagagactaaagtg 172  Q
    | |||||||||||||||||| ||| |||||||    
T  12651293 tagcaatttatctgcattcacagattaaagtg 12651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 26705236 - 26705099
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||  ||||||||||||||| ||| |||||||||||| |   ||||||||||||||||||||||||||||||| |||  |||||     
T  26705236 cagtccctgaatgtagacgttgttggtcaatttcagggactaaagtgactaacgggttctacattcagggactaaattgactaacggattctatattcag 26705137  T
Q  101 tgactaaattgactaacagagtctacattcaggaacta 138  Q
     ||||||||||| ||||  | ||| |||||||| ||||    
T  26705136 ggactaaattgattaacgaaatctgcattcagggacta 26705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 10587990 - 10587887
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||  |||| |||||||||||||| ||| ||||||||||| ||||||||||| |||||||||| | |||| | ||  ||||||| |||||||||||    
T  10587990 aaattgaacaacatagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttctcattcatggactaaagtgac 10587891  T
Q  206 taat 209  Q
    ||||    
T  10587890 taat 10587887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 13536749 - 13536840
Alignment:
Q  118 agagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||||||||||||||| | |||| | ||  ||||| | |||||||||||||||    
T  13536749 agagtctacattcagggactgttttgcaatttctctgtattcagagactaaagtgactactcctttctcattcaaggactaaagtgactaat 13536840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 19295384 - 19295281
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||| || ||| ||| ||| ||| ||||||||||| || |||||||| |||||||||| | |||| | ||||||||| | |||||||||||    
T  19295384 aaattgactaacatagcctatatttagggactgttttgcaatttctcagcattcagggactaaagtgactactcctttcctattcaaggactaaagtgac 19295285  T
Q  206 taat 209  Q
    ||||    
T  19295284 taat 19295281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 25089328 - 25089431
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||| ||||||||||| ||||||||||| ||||||||||| |||||||||| | | ||||   | ||||| | |||||||||||    
T  25089328 aaattgaccaacatagtctatattcaggaactgttttgcaatttctctgcattcagtgactaaagtgactattcattgtccattcagggactaaagtgac 25089427  T
Q  206 taat 209  Q
    ||||    
T  25089428 taat 25089431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 26705204 - 26705307
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||  ||||||||||||| ||| ||||||||||| ||| ||||||| |||||||||| | |||| | | | ||||| |||||||||||||    
T  26705204 aaattgaccaacaacgtctacattcagggactgttttgcaatttctctacattcagggactaaagtgactactctttttccattcaggaactaaagtgac 26705303  T
Q  206 taat 209  Q
    ||||    
T  26705304 taat 26705307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 28752337 - 28752279
Alignment:
Q  114 taacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||    
T  28752337 taacagagtctacattcatggactattttgcaatttatctgcattcaggtactaaagtg 28752279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 21222568 - 21222465
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||  |||| ||||| | |||| | ||  ||||| |||||||||| ||    
T  21222568 aaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagttac 21222469  T
Q  206 taat 209  Q
    ||||    
T  21222468 taat 21222465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 26705173 - 26705089
Alignment:
Q  32 ttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaa 116  Q
    |||| ||| |||| ||||||| | | |||| |||||||||||||||||| ||||| | ||||||||||  |||||||||||||||    
T  26705173 ttcagggactaaattgactaacggattctatattcagggactaaattgattaacgaaatctgcattcagggactaaattgactaa 26705089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10587958 - 10588009
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaa 52  Q
    |||||| ||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  10587958 cagtccctgaatgtagactatgttgttcaatttcagggactaaagtgactaa 10588009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 10862202 - 10862253
Alignment:
Q  120 agtctacattcaggaactattttgcaatttatctgcattcagagactaaagt 171  Q
    |||||||||||||  ||| ||||||||||| ||||||||||| |||||||||    
T  10862202 agtctacattcagctactgttttgcaatttctctgcattcagggactaaagt 10862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 27508784 - 27508576
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| |||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||     
T  27508784 cagtccctgaatgtagactctgttagtcaatttcatggactaaagtgactaacggagtctacattcagggactaaattgactaacagagtctgcattcag 27508685  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| | ||| ||    
T  27508684 ggactaaattgactaacatagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggact-aa 27508586  T
Q  201 gtgactaatc 210  Q
    ||||||||||    
T  27508585 gtgactaatc 27508576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 38761076 - 38761274
Alignment:
Q  14 tagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgac 113  Q
    |||||| ||||| |||||||   ||| ||||||||||||   ||||| |||||||||||||||||||||||| |||||||||||| | |||||||||||     
T  38761076 tagactctgttgatcaatttttgggactaaagtgactaacagagtctgcattcagggactaaattgactaacagagtctgcattcgaggactaaattgat 38761175  T
Q  114 taacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| | |||||||||| |||||||    
T  38761176 taacaaagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaaagtgattaatctc 38761274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 14197550 - 14197707
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||||| ||| |||||||||||| | |||||||||| || ||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  14197550 tgttggtcaatttcagggactaaagtgactaacggagtctacattgagagactaaattgactaacggagtctgcattcagggattaaattgactaacaga 14197649  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgact 178  Q
    ||||||||||||| ||||| ||||||||||||||||||||| | ||||| || |||||    
T  14197650 gtctacattcagggactatattgcaatttatctgcattcaggggctaaaatgacgact 14197707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6441416 - 6441586
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| | || |||||||||| |||  ||||||||||| | |||||||||| || |||||||||||||||| |||||||||||||     
T  6441416 cagtccctgaatgtagactct-ttagtcaatttcaaggacaaaagtgactaacggagtctacatttagagactaaattgactaacagagtctgcattcag 6441514  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
     ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  6441515 ggactaaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcagagactaaagtg 6441586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 5080180 - 5080388
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    ||||| |||||| |||||| |||| |||||||||| ||| |||| ||| ||| | |||||||||||||| |||||||||| ||||||||||||||||||     
T  5080180 cagtctttgaatgtagactctgttagtcaatttcaaggactaaaatgattaacggagtctacattcaggtactaaattgattaacggagtctgcattcag 5080279  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||| | ||| |||||||||  |||||||| |||||||||||||||||| ||||||| |  |||||  | |||||||||   ||||||    
T  5080280 ggactaaattgactaatatagtttacattcagagactattttacaatttatctgcattcagggactaaaataacgacttctttcctattcagagactaaa 5080379  T
Q  201 gtgactaat 209  Q
    |||||||||    
T  5080380 gtgactaat 5080388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15000854 - 15000642
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| | ||| |||||| | ||||||||||||| ||| ||||||| | || | |||||||||| ||||||||||||||||| |||||||| |||||||    
T  15000854 cagtccctaaatgtagactttattggtcaatttcagggactaaagtgtccaacggagtctacattaagggactaaattgactatcggagtcttcattcaa 15000755  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattca-tgaactaa 199  Q
     ||||||| ||||||||| | ||||||||| |  | ||||||||||||||||||||||||| |||||||||| | | || | |||||||||  || ||||    
T  15000754 ggactaaactgactaacataatctacattctgagaatattttgcaatttatctgcattcagggactaaagtgacaattcctttcctattcagggacctaa 15000655  T
Q  200 agtgactaatctc 212  Q
    |||||||||||||    
T  15000654 agtgactaatctc 15000642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 36150993 - 36150845
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    |||| |||||||| ||||||||||||| | ||||||  |||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |    
T  36150993 ttcaaggactaaaatgactaacggagtttacattcagagactaaattgactaacagagtctacatctagggattattttgcaatttatctgcattcatgg 36150894  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    | | ||||| |||||||| ||||||| ||| ||||||||||||||||||    
T  36150893 atttaagtgacgactcatttcctatttatggactaaagtgactaatctc 36150845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 37787765 - 37787944
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    |||||||| | | |||| |||||||| |  ||||||| ||||||  | ||||||||||||  |||||||||||||||| |||| ||||||||  ||||||    
T  37787765 tgaatataaattttgtttgtcaattttaaagattaaaatgactagcggagtctacattcaacgactaaattgactaacagagtatgcattcagggactaa 37787864  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattca 191  Q
    ||||||||||| |||||||||||| |||||||||||||||||   ||||||||| |||||||||||||| |||| || ||||||    
T  37787865 attgactaacaaagtctacattca-gaactattttgcaattt---tgcattcagggactaaagtggcgattcatttcttattca 37787944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 45012932 - 45013059
Alignment:
Q  14 tagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgac 113  Q
    |||||| | ||||||||||||| ||| |||||||| ||  | ||||||||||||| || |||||||||||||||||||||||||||  ||||||||||||    
T  45012932 tagactctattggtcaatttcagggactaaagtgattagcggagtctacattcagagattaaattgactaacggagtctgcattcagggactaaattgac 45013031  T
Q  114 taacagagtctacattcaggaactattt 141  Q
    ||||| | ||||||||||||||||||||    
T  45013032 taacaaactctacattcaggaactattt 45013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 43257366 - 43257520
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    |||||||| |||||||||||||| ||||| |||| |  |||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||| |    
T  43257366 ttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaacagagtctatattcaaggattattttgcaatttatctgcattcaggg 43257465  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaatctctcaatt 218  Q
    | ||||||| |||||||| | ||||||| | | | |||||||| ||||| |||||    
T  43257466 attaaagtgacgactcattttctattcagggattgaagtgactgatctcccaatt 43257520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 3404663 - 3404458
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaat 101  Q
    ||||||||||| ||||||  ||| |||||| |||   | |||||||||||||| |  ||||| ||||||||||||||||||||| ||| ||||||| |      
T  3404663 agtccttgaatgtagactcggttagtcaatatcagaaactaaagtgactaatggaa-ctacactcagggactaaattgactaacagag-ctgcatttagg 3404566  T
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaag 201  Q
    ||||||||||||||||||||| |||||||| | |||| |||||||||||||||| || ||  |||||| || ||| |  | | ||||||| | |||||||    
T  3404565 gactaaattgactaacagagtgtacattcatggactactttgcaatttatctgcgtttaggtactaaaatgacgatttcttttctattcaaggactaaag 3404466  T
Q  202 tgactaat 209  Q
    ||||||||    
T  3404465 tgactaat 3404458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 15272426 - 15272326
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||| || | |||||| ||  ||||| | |||||||||||    
T  15272426 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgac 15272327  T
Q  206 t 206  Q
    |    
T  15272326 t 15272326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 43257342 - 43257426
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtct 92  Q
    ||||| |||| | ||||||||||||||| ||| |||| ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  43257342 tgaatgtagattttgttggtcaatttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaacagagtct 43257426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 3404634 - 3404735
Alignment:
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    |||||||||| ||||||||||||| | ||||||||||||||| ||||||||||| | |||||||| | |||| | | | ||| | |||||||||||||||    
T  3404634 attgactaaccgagtctacattcaaggactattttgcaatttctctgcattcagggcctaaagtgactactctttttccatttaggaactaaagtgacta 3404733  T
Q  208 at 209  Q
    ||    
T  3404734 at 3404735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 36151017 - 36150933
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtct 92  Q
    ||||| |||||| ||||||||||||||| ||| |||| ||||||| | ||| ||||||||| |||||||||||||||| ||||||    
T  36151017 tgaatgtagactttgttggtcaatttcaaggactaaaatgactaacggagtttacattcagagactaaattgactaacagagtct 36150933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 27508752 - 27508855
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||| | ||||| |||||||||| | |||| | | | ||||| | | |||||||||    
T  27508752 aaattgactaacagagtctacattcagggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgac 27508851  T
Q  206 taat 209  Q
    ||||    
T  27508852 taat 27508855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 29934448 - 29934554
Alignment:
Q  111 gactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatc 210  Q
    ||||||||  ||||| ||||| ||||||||||||||||||||| | || ||||||||||||| |||||  | |||||| || | |||||||| |||||||    
T  29934448 gactaacaatgtctatattcatgaactattttgcaatttatctaccttaagagactaaagtgacgactattttcctatccaaggactaaagtaactaatc 29934547  T
Q  211 tctcaat 217  Q
    || ||||    
T  29934548 tcccaat 29934554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 45013060 - 45013150
Alignment:
Q  119 gagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    ||||||| ||||| | ||||||||||||||||| ||||||||  ||||||| || |||||| | ||||||| | | |||||||||||||||    
T  45013060 gagtctatattcaaggactattttgcaatttatttgcattcaaggactaaactgacgactcttttcctattaagggactaaagtgactaat 45013150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 5080212 - 5080111
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||||||||   ||| ||||||| ||| |||||||||||  ||||||||| | |||  | ||| ||||| | |||||||||||    
T  5080212 aaattgactaacagagtctacattcaaagactgttttgcattttctctgcattcaggaactaaagtgactacttttttcccattcagggactaaagtgac 5080113  T
Q  206 ta 207  Q
    ||    
T  5080112 ta 5080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 15000822 - 15000925
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| || | |||||||||| ||| ||| ||||||||||  ||||||| || ||||||||||| | |||||| ||| ||||| | ||||||||| |    
T  15000822 aaattgaccaataaagtctacatttagggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtggc 15000921  T
Q  206 taat 209  Q
    ||||    
T  15000922 taat 15000925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 6441447 - 6441382
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||| | ||||||||| ||||| ||||    
T  6441447 aaattgactaa-agagtctacattcagggactgttttgcaatttctttgcattcagggactatagtg 6441382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 36150992 - 36151095
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||||||||||| ||| ||||||||||| ||  ||||||  || ||||||| | |||||| | | || || | |||||||||||    
T  36150992 aaattgaccaacaaagtctacattcaggtactgttttgcaatttctcaacattcaaggattaaagtgactactcattttccatccagggactaaagtgac 36151091  T
Q  206 taat 209  Q
    ||||    
T  36151092 taat 36151095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 21658747 - 21658689
Alignment:
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattca 160  Q
    ||||||||||||||||||||| |||||||| | | | ||||||||||| | ||||||||    
T  21658747 gactaaattgactaacagagtttacattcaagtattgttttgcaatttctttgcattca 21658689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 45012919 - 45012849
Alignment:
Q  139 ttttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    ||||||||||| | |||||||||||||||||||| | |||| | ||| ||||| | || ||||||||||||    
T  45012919 ttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagggaccaaagtgactaat 45012849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 4617279 - 4617331
Alignment:
Q  97 tcaatgactaaattgactaacagagtctacattcaggaactattttgcaattt 149  Q
    ||||||| |||||||| ||||| | |||||||||||  |||||||||||||||    
T  4617279 tcaatgattaaattgattaacaaaatctacattcagagactattttgcaattt 4617331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 48755529 - 48755324
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatga-agtctacattcagggactaaattgactaacggagtctgcattcaatgacta 106  Q
    ||||| |||||| ||||||||||||||| || | |||||||||||    |||||||||||| |||||||||||||||||||||||||||||||  |||||    
T  48755529 tgaatgtagactctgttggtcaatttcaggggtcaaagtgactaacacgagtctacattcatggactaaattgactaacggagtctgcattcagggacta 48755430  T
Q  107 aattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgact 206  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||| | ||||||||||||    
T  48755429 aattgactaacagagtctacattcagggactattttgcaacttatctgcattcagagactaaagtgacgactcctttcctattcagggactaaagtgact 48755330  T
Q  207 aatctc 212  Q
    ||||||    
T  48755329 aatctc 48755324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 44 - 212
Target Start/End: Complemental strand, 1426649 - 1426481
Alignment:
Q  44 agtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttg 143  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||    
T  1426649 agtgactaacggagtctacatttagggactaaattgactaacggagtctgcattcagggactaaattgactaacataatctacattcaggaactattttg 1426550  T
Q  144 caatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||||||||||||||||   |||||||| |||||||| |||||||||   ||||||||||||||||||    
T  1426549 caatttatctgcattcaggatctaaagtgacgactcatttcctattcagagactaaagtgactaatctc 1426481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 33343212 - 33343003
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    ||||||||||||||| ||| ||||||||||||||| | | |||| ||| |||  |||||||||||||||||||||||||||||||  ||| ||||||||     
T  33343212 cagtccttgaatataaactctgttggtcaatttcaggaactaaa-tgattaacaaagtctacattcagggactaaattgactaacatagtttgcattcag 33343114  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     |||||| |||||||||| |||||||||||||| || |||| ||||||||||||||||||| |||||||||| |||||||| | ||||||| | ||||||    
T  33343113 ggactaa-ttgactaacatagtctacattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaa 33343015  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  33343014 gtgactaatctc 33343003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 41 - 212
Target Start/End: Complemental strand, 15031356 - 15031185
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactatt 140  Q
    |||| ||||||| | ||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  15031356 taaattgactaacggagtctacattcagtgactaaattgactaacggagtttgcattcagggactaaattgactaacagagtctacattcagggactatt 15031257  T
Q  141 ttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    || |||||||||||||||||  |||||||||| |||||| | ||| ||||| | ||||||||| ||||||||    
T  15031256 ttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggactaaagtggctaatctc 15031185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21514952 - 21514741
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||| |||||   |||| ||||||| |||||||||||||||||| |||| |||||||     
T  21514952 cagtccctgaatgtagactatattggtcaatttcatggattaaagtaactaacagagtccacattcaaggactaaattgactaacgaagtccgcattcag 21514853  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||| |||||||||||||||||||| | |||||||| ||||||||||| |||||| |||||||||| |||||  | |  ||||||   ||||||    
T  21514852 ggactaaattaactaacagagtctacattcaaggactattttacaatttatctgtattcagggactaaagtgacgacttcttttatattcaaagactaaa 21514753  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  21514752 gtgactaatctc 21514741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 26498650 - 26498804
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| |    
T  26498650 ttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggactattttgcaatttatctgcattcaggg 26498749  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaatctctcaatt 218  Q
    |||||||||  ||||||| |||||||||   ||||||||||||||| ||||||||    
T  26498750 actaaagtgatgactcatttcctattcagagactaaagtgactaatatctcaatt 26498804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 44968063 - 44967859
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| | ||| |||||| ||||||||||||||| ||||||||||||||||   ||||||||||||  ||||||||||||||| || ||||| ||| |     
T  44968063 cagtccctaaatgtagactttgttggtcaatttcagggattaaagtgactaagagagtctacattcaaagactaaattgactaatggggtctgtattgag 44967964  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||||||||||||||||  |||||||||||||| ||| ||||||||| |||||||||| | |||||| | ||||| | | ||||||    
T  44967963 agactaaattgactaacagagtctacattcaaaaactattttgcaatatatttgcattcagggactaaagtgacaactcattttctattaaaggactaaa 44967864  T
Q  201 gtgac 205  Q
    |||||    
T  44967863 gtgac 44967859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 212
Target Start/End: Original strand, 43562711 - 43562882
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactatt 140  Q
    |||||||||||| || ||||||||||||||| |||||||||||| | ||||||||||||| || ||||||||| |||||| |||||||||| | ||||||    
T  43562711 taaagtgactaacgatgtctacattcagggattaaattgactaatgaagtctgcattcaacgattaaattgacaaacagaatctacattcaaggactatt 43562810  T
Q  141 ttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    || ||||||||||||||||||| |||||| || ||| |||| ||||||| | | |||||| |||||||||||    
T  43562811 ttacaatttatctgcattcagaaactaaaatgacgaatcatttcctattgagggactaaaatgactaatctc 43562882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 11989116 - 11989293
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| |||||||||||| |||||||||||||||  || ||||||| |||| | |||||||||| | |||||||||||| ||||||||||||||||||     
T  11989116 cagtccctgaatatagactctgttggtcaatttcagagactaaagtggctaacggagtctacatttaaggactaaattgattaacggagtctgcattcag 11989215  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgact 178  Q
     ||||| ||||||||||||||||||||   ||  ||||||||||||||||||| ||| ||||||||||| || |||||    
T  11989216 ggactagattgactaacagagtctacaactagagactattttgcaatttatctacatgcagagactaaaatgacgact 11989293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15031428 - 15031291
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| | ||| |||||| ||||||||||||||| ||| |||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||     
T  15031428 cagtccctaaatctagactttgttggtcaatttcagggactaaagtgactaacggagtctacattcagtgactaaattgactaacggagtctacattcag 15031329  T
Q  101 tgactaaattgactaacagagtctacattcaggaacta 138  Q
    ||||||||||||||||| |||| | |||||||| ||||    
T  15031328 tgactaaattgactaacggagtttgcattcagggacta 15031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18445476 - 18445647
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||  |||||| |||| |||||||||| ||||||| ||||||||   |||||| |||| |||| |||||||| ||||| ||||||||||||     
T  18445476 cagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcag 18445575  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
      ||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  18445576 atactaagttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtg 18445647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14434711 - 14434854
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||||||||| |||||| |||| || ||||||| ||| |||||||||||  | ||||||||||||| ||||||||| |||| | |||| ||||||||     
T  14434711 cagtccttgaatgtagactttgttagttaatttcagggactaaagtgactagcggagtctacattcagagactaaattaactatctgagtttgcattcag 14434810  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgc 144  Q
     |||||||||||||||||||||||||||||| | ||||||||||    
T  14434811 ggactaaattgactaacagagtctacattcatggactattttgc 14434854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 15005159 - 15005025
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||||| ||| ||||||||||| ||||| ||||||||||  |||| |||||||| |||||||||| |||||| |||||||||||||  || |||    
T  15005159 tgaatgtagactctgtcggtcaatttcagggatttaagtgactaacaaagtatacattcaaggactaaattaactaactgagtctgcattcagggattaa 15005060  T
Q  108 attgactaacagagtctacattcaggaactatttt 142  Q
    |||||||||||||||||||||||| | ||||||||    
T  15005059 attgactaacagagtctacattcaaggactatttt 15005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 42453149 - 42453040
Alignment:
Q  103 actaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagt 202  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||| |||||||| | ||||||| | | ||||||    
T  42453149 actaaattgactaacagagtctacatttagggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattcaaggattaaagt 42453050  T
Q  203 gactaatctc 212  Q
    ||||||||||    
T  42453049 gactaatctc 42453040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26920363 - 26920213
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||| || ||| ||||| ||||||||| |||||||||||||||||| || ||||||| | |||||||||||||||||| ||| | |||| |     
T  26920363 cagttcttgaatgtatactttgttgatcaatttcagggattaaagtgactaatggagcctacatttaaggactaaattgactaacgaagtatacattgag 26920264  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttat 151  Q
      |||||||| ||||| |||||||| ||| ||  |||||||||||||||||    
T  26920263 gaactaaattaactaatagagtctatatttagagactattttgcaatttat 26920213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 39541773 - 39541671
Alignment:
Q  110 tgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    ||||||||| | |||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||   ||||||| |||||||    
T  39541773 tgactaacataatctatattcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcagtgactaaagcgactaat 39541674  T
Q  210 ctc 212  Q
    |||    
T  39541673 ctc 39541671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 38498277 - 38498128
Alignment:
Q  67 agggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagact 166  Q
    |||||||||| |||||||  |||||| ||||||  ||||||||||||||||| ||| || ||| | | ||||||||||||||||||||||||||| ||||    
T  38498277 agggactaaagtgactaatagagtctacattcagggactaaattgactaacaaagtttatatttatggactattttgcaatttatctgcattcagggact 38498178  T
Q  167 aaagtggcgactcatctcctattcatgaactaaagtgactaatctctcaa 216  Q
    ||||||   |||||| | |||||||   |||||| |||||||||| ||||    
T  38498177 aaagtgatcactcattttctattcagagactaaactgactaatctttcaa 38498128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 26840190 - 26840039
Alignment:
Q  8 tgaatatagactatgtt-ggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgacta 106  Q
    |||||||||||| |||| ||| |||| |||||||||||||||||||   ||| || ||||| |||||||||| ||||||||||||| || | || |||||    
T  26840190 tgaatatagactctgtttggttaattccatggattaaagtgactaacagagtttatattcaaggactaaattaactaacggagtcttcaattaaagacta 26840091  T
Q  107 aattgactaacagagtctacattcaggaactattttgcaatttatctgcattcag 161  Q
    ||||||||   ||||||||||||||   ||||||||| ||||||||| |||||||    
T  26840090 aattgact---agagtctacattcaaagactattttgtaatttatctacattcag 26840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 15031396 - 15031499
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| | |||||| ||| ||||| | |||||||||||    
T  15031396 aaattgaccaacaaagtctagatttagggactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggactaaagtgac 15031495  T
Q  206 taat 209  Q
    ||||    
T  15031496 taat 15031499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26498619 - 26498717
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    |||||| ||||| ||||| |||||||||||||||| ||| |||||||||||| | ||| | ||||||| |||||||||||||||| |||||| ||||||    
T  26498619 cagtccctgaatgtagaccatgttggtcaatttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattca 26498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 48755504 - 48755570
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  48755504 aaattgaccaacagagtctacattcaggaactgttttgcaatttctctgcattcagggactaaagtg 48755570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 36383186 - 36383089
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaaca 118  Q
    |||| |||||||| | ||| |||||||||||| |||||||| |||||| |||||||||||| |||  ||||||||||||| || ||||||||||||||    
T  36383186 tgttagtcaattttagggactaaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattcaaggattaaattgactaaca 36383089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 15005134 - 15005237
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||  ||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| | | ||||  || ||||| | | |||||||||    
T  15005134 aaattgaccgacagagtctacattcagaaactgttttgcaatttctctgcattcagagactaaagtgaccagtcattacccattcaaggattaaagtgac 15005233  T
Q  206 taat 209  Q
    ||||    
T  15005234 taat 15005237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 26498651 - 26498548
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||  ||||||||||||| ||| ||||||||||| ||||||||||| |||||||||| | |||| | ||| ||||| | |||||||||||    
T  26498651 aaattgaccaacatggtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcttttcccattcagggactaaagtgac 26498552  T
Q  206 taat 209  Q
    ||||    
T  26498551 taat 26498548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 11989148 - 11989082
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| ||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  11989148 aaattgaccaacagagtctatattcagggactgttttgcaatttctctgcattcagagactaaagtg 11989082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 20759104 - 20758956
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    ||||||||||||| ||||||||  |||||    |||  ||||||||||||||| |||||||| ||||||  |||||||| ||||||||||| |||||  |    
T  20759104 ttcagggactaaagtgactaacatagtctattctcagggactaaattgactaatagagtctatattcagagactattttacaatttatctgtattcaagg 20759005  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||||||| ||||| || || ||||||   | |||||||| |||||||    
T  20759004 actaaagtgacgacttatttcatattcagagattaaagtgattaatctc 20758956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 41985008 - 41984904
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||   ||| ||||| | |||| | || |||||| |||||||||||||    
T  41985008 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttcttattcaggaactaaagtgac 41984909  T
Q  206 taatc 210  Q
    |||||    
T  41984908 taatc 41984904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 38498304 - 38498227
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaac 85  Q
    ||||| |||||| |||| || ||||| | ||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  38498304 tgaatgtagactttgttagttaattttagggactaaagtgactaatagagtctacattcagggactaaattgactaac 38498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 18445508 - 18445404
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||   ||| ||||| | |||| | ||  ||||| |||||||||||||    
T  18445508 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgac 18445409  T
Q  206 taatc 210  Q
    |||||    
T  18445408 taatc 18445404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 20759103 - 20759166
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
    ||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||  |||||||    
T  20759103 aaattgactaacaaagtctacattcaaggactattttgcaatttctctgcattcaaggactaaa 20759166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 33412288 - 33412201
Alignment:
Q  125 acattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||||| | |||||||| ||||||||||||||||  ||| ||||||| ||| |||| |||||||||   ||||||||||||||||||    
T  33412288 acattcaaggactattttacaatttatctgcattcgaagattaaagtgacgattcatttcctattcaaagactaaagtgactaatctc 33412201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 38498279 - 38498382
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||| ||||||| |||||||||||||  ||||||||||||||| | ||||||||| |||||||||| | |||| | ||  ||||| | | |||||||||    
T  38498279 aaattaactaacaaagtctacattcagagactattttgcaatttctatgcattcagggactaaagtgactactcctttctcattcagggattaaagtgac 38498378  T
Q  206 taat 209  Q
    ||||    
T  38498379 taat 38498382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 7300152 - 7300301
Alignment:
Q  63 attcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcaga 162  Q
    ||||| |||||||| |||||||| ||||||||||| |  || |||||||||||||||| |||||| |   | ||||||||| ||||||| |||||  ||     
T  7300152 attcaaggactaaagtgactaacagagtctgcatttagggattaaattgactaacagaatctacaatttcgtactattttgtaatttatgtgcatcgag- 7300250  T
Q  163 gactaaagtggcgactcatctcctattcatgaactaaagtgactaatctct 213  Q
    ||||||| |  |||||| | |||||||||   |||||||| ||||||||||    
T  7300251 gactaaaataacgactcctttcctattcagagactaaagtaactaatctct 7300301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 20759134 - 20759052
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaa 84  Q
    ||||||||||| |||||| |||| |||||||||| ||| ||||||||||||   ||||||   ||||||||||||||||||||    
T  20759134 agtccttgaatgtagactttgttagtcaatttcagggactaaagtgactaacatagtctattctcagggactaaattgactaa 20759052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 39541786 - 39541852
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| ||||||||||||||||||  ||| |||| |||||| ||||||||||| ||||||||||    
T  39541786 aaattgaccaacagagtctacattcagagactgttttacaatttctctgcattcagggactaaagtg 39541852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 21514920 - 21515023
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| || | |||||||||||||| ||| ||||| ||||||||| ||||||  ||||||| || | |||||| ||| ||||| | || ||||||||    
T  21514920 aaattgaccaatatagtctacattcagggactgttttgaaatttatctacattcaaggactaaaatgactactcatttccaattcagggacaaaagtgac 21515019  T
Q  206 taat 209  Q
    ||||    
T  21515020 taat 21515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 33343180 - 33343283
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||||| || ||||| | ||| ||||||||||| |||||||||||  |||||| || | |||||| ||| ||||| | | |||||||||    
T  33343180 aaattgaccaacagagtttatattcaaggactgttttgcaatttctctgcattcagtaactaaaatgtctactcatttcccattcagggattaaagtgac 33343279  T
Q  206 taat 209  Q
    ||||    
T  33343280 taat 33343283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 14434743 - 14434641
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||| ||||||| |||||||||||| | ||| ||||||||| | |||||||| |  |||||||||| | | |||| ||| ||||||| | |||||||||    
T  14434743 aaattaactaacaaagtctacattcaaggactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccattcatggattaaagtgac 14434644  T
Q  206 taa 208  Q
    |||    
T  14434643 taa 14434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 44968031 - 44968096
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| |||| |||||||||| ||| ||| ||||||||||||||| ||||||| ||||||||||    
T  44968031 aaattgaccaacaaagtctacatttagggactgttttgcaatttatctacattcag-gactaaagtg 44968096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 26920331 - 26920396
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagt 171  Q
    |||||||  |||| ||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  26920331 aaattgatcaacaaagtatacattcaagaactgttttgcaatttttctgcattcatagactaaagt 26920396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 1426651 - 1426706
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcag 161  Q
    |||||||| |||| |||||||||||||  ||| ||||||||||| |||||||||||    
T  1426651 aaattgaccaacaaagtctacattcagtgactgttttgcaatttctctgcattcag 1426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 43562734 - 43562808
Alignment:
Q  32 ttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgacta 106  Q
    |||| |||||||| ||||||||||||||| ||||||  || ||||||||| ||| || ||| ||||||| |||||    
T  43562734 ttcagggattaaattgactaatgaagtctgcattcaacgattaaattgacaaacagaatctacattcaaggacta 43562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41984976 - 41985049
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggacta 74  Q
    |||| ||||||  |||||| |||| |||||||||| ||||||| ||||||||   |||||| ||||||||||||    
T  41984976 cagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattcagggacta 41985049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 1426620 - 1426576
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaac 85  Q
    |||| ||||||| | ||||| ||||||||||||||||||||||||    
T  1426620 taaattgactaacggagtctgcattcagggactaaattgactaac 1426576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 7300142 - 7300206
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaac 85  Q
    |||||||||| |||| ||| ||||||||||||   ||||| |||| ||||| |||||||||||||    
T  7300142 tgttggtcaaattcaaggactaaagtgactaacagagtctgcatttagggattaaattgactaac 7300206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 36383172 - 36383108
Alignment:
Q  67 agggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattca 131  Q
    |||||||||| ||||||||| |||||  |||||  |||||||||||| |||| ||||| ||||||    
T  36383172 agggactaaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattca 36383108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 50335649 - 50335438
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| ||||||||||||| | ||| |||||||| ||  | |||||||||||||||||||||||||| |||||||||||||||||     
T  50335649 cagtccctgaatgtagactctgttggtcaattttagggactaaagtgattagcggagtctacattcagggactaaattgacgaacggagtctgcattcag 50335550  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| | | ||||    
T  50335549 ggactaaattgactaacaaagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaa 50335450  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  50335449 gtgactaatctc 50335438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 37608160 - 37607970
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||||| |||  ||||||||||| | |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  37608160 tgttggtcaatttcagggaccaaagtgactaacggagtctacattcaaggactaaattgactaacagagtctgcattcaaggactaaattgactaacaga 37608061  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||||||||| | ||||||||||||||||| ||||||||| ||||||| || | | |||| ||||||||| | ||| |||| |||||||||    
T  37608060 gtctacattcaaggactattttgcaatttatatgcattcagggactaaaatgacaattcatttcctattcagggact-aagttactaatctc 37607970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 13735654 - 13735476
Alignment:
Q  1 cagtccttgaatatagactatgttgg-tcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    |||||| ||||| |||||| |||| | ||||||||| ||| |||||||||||| | |||||||||| |  ||||||||||||||||||||||||||||||    
T  13735654 cagtccctgaatgtagactctgtttgatcaatttcagggactaaagtgactaacggagtctacatttattgactaaattgactaacggagtctgcattca 13735555  T
Q  100 atgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgact 178  Q
      ||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||| |||||||||| |||||    
T  13735554 gagactaaattgactaacagagtctacattgtgggactattttgtaatttatctgcattcagggactaaagtgacgact 13735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 8097795 - 8097989
Alignment:
Q  10 aatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaat 109  Q
    |||||||||||||||||||||||| | ||| |||| |||||||   |||||||||||||| |||||||||||||| ||||| || |||||| ||||||||    
T  8097795 aatatagactatgttggtcaattttaaggactaaaatgactaacagagtctacattcaggaactaaattgactaatggagtatgtattcaaggactaaat 8097894  T
Q  110 tgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtga 204  Q
    ||||||||||| |||| ||||| | |||||||||  |||||||||||||||| ||||||||||   |||||| ||||||| | | ||||||||||    
T  8097895 tgactaacagaatctatattcatggactattttgtgatttatctgcattcagggactaaagtgaaaactcatttcctatttagggactaaagtga 8097989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 32374092 - 32374201
Alignment:
Q  56 agtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgc 155  Q
    |||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||       |||||||| | ||||||||||||||||| |||    
T  32374092 agtctacattcagggactaaattgactaacagagtttgcattcagggactaaattgactaa-------tacattcatggactattttgcaatttatttgc 32374184  T
Q  156 attcagagactaaagtg 172  Q
    ||| || ||||||||||    
T  32374185 atttagggactaaagtg 32374201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 11633307 - 11633191
Alignment:
Q  96 ttcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaa 195  Q
    ||||| ||||||| ||||||||| | |||||||||| |||||||||| |||||||||||| ||||   || |||||| |||||  | ||||||||||| |    
T  11633307 ttcaaggactaaagtgactaacataatctacattcatgaactattttacaatttatctgctttcaagaaccaaagtgacgacttctttcctattcatgga 11633208  T
Q  196 ctaaagtgactaatctc 212  Q
     ||||||||||||||||    
T  11633207 ttaaagtgactaatctc 11633191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 50335617 - 50335683
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||| || |||||||    
T  50335617 aaattgaccaacagagtctacattcagggactgttttgcaatttgtctgcattcagggattaaagtg 50335683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 32374088 - 32373986
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||| |||||||||||| ||||| |||||||| || | ||||| ||| |||||||||| | |||| | ||||||||| | |||||| ||||    
T  32374088 aaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccagggactaaagtgactactc-tttcctattcagggactaaaatgac 32373990  T
Q  206 taat 209  Q
    ||||    
T  32373989 taat 32373986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 13735631 - 13735685
Alignment:
Q  115 aacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
    ||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  13735631 aacagagtctacattcagggactgttttgcaatttctttgcattcagagactaaa 13735685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 37608165 - 37608249
Alignment:
Q  124 tacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaa 208  Q
    |||||||||| ||| ||||||||||| ||||||||||| ||||||| || | |||| | ||| ||||| | ||||||||||||||    
T  37608165 tacattcagggactgttttgcaatttctctgcattcagggactaaaatgactactcctttcccattcaaggactaaagtgactaa 37608249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 8097818 - 8097715
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||| ||| ||  ||| ||||||||||| |||||||| ||| ||||||||||| ||| || ||  |||||   |||||||||||    
T  8097818 aaattgaccaacatagtctatatttagagactgttttgcaatttctctgcatttagaaactaaagtggctactaatttctcattcagagactaaagtgac 8097719  T
Q  206 taat 209  Q
    ||||    
T  8097718 taat 8097715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 42847198 - 42847297
Alignment:
Q  110 tgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    ||||||||| |||||||||||| | | | ||||||||||| ||||||||||| || ||||||| | |||  | |||||| ||   |||||||||||||||    
T  42847198 tgactaacaaagtctacattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttttcctatccagagactaaagtgactaat 42847297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2555647 - 2555430
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| ||||||  |||||||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||    
T  2555647 cagtccctgaatgtagactgcgttggtcaatttcagggattaaagtgactaacgaagtctacgttcagggactaatttgactaacgaagtctgcattcaa 2555548  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     |||||||||||||||||||||||||||||||  ||||||||||||| ||| || |||||| |||||||||  |||||||| ||||| |||    |||||    
T  2555547 cgactaaattgactaacagagtctacattcagagactattttgcaatatatttgtattcagggactaaagttacgactcatttcctactcagaggctaaa 2555448  T
Q  201 gtgactaatctctcaatt 218  Q
    ||||||||||||||||||    
T  2555447 gtgactaatctctcaatt 2555430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10760079 - 10760284
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| || ||| ||||||||||||||| ||| |||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||     
T  10760079 cagtccctgaatgtaaactttgttggtcaatttcaaggactaaa-tgattaacggagtctacattcagggactaaattgactaacggagtctgcattcag 10760177  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||| | | ||||    
T  10760178 ggactaaattgacttacagagtctacatttagggactattttgcaatttatctgcattcagagactaaagtgacggctcatttcctattcagggattaaa 10760277  T
Q  201 gtgacta 207  Q
    |||||||    
T  10760278 gtgacta 10760284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 13753313 - 13753511
Alignment:
Q  14 tagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgac 113  Q
    |||||| ||||||||||||||| ||| |||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  13753313 tagactctgttggtcaatttcagggactaaagtgactgatggagtctactttcaggggctaaattgactaacggagtctgcatttaaggactaaattgac 13753412  T
Q  114 taacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |||||  | ||||||| | | ||||||||||||||||||    
T  13753413 ttacagagtctacatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggactaaagtgactaatctc 13753511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 30852787 - 30852583
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||| | |||||| ||||||||||||||||| | |||||||||||| | | ||||||||||| ||||||||||||| ||| ||||||||||||     
T  30852787 cagtccctgattgtagactctgttggtcaatttcatgaactaaagtgactaacggaatctacattcagagactaaattgacttacgaagtctgcattcag 30852688  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||||||| ||||||||||||||||       |||||||| |||||| |||||||||| ||||| || ||||||||| | ||||||    
T  30852687 ggactaaattgactaacagagtttacattcaggaactat-------tttatctgtattcagggactaaagtgacgacttatttcctattcaaggactaaa 30852595  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  30852594 gtgactaatctc 30852583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 17497202 - 17497052
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaat 101  Q
    ||||| ||||| |||||| ||||||||||||||| ||| |||||||||  | | ||||||||||||||||||||||| |||||| || |||||||||||     
T  17497202 agtccctgaatgtagactttgttggtcaatttcagggactaaagtgaccgacggagtctacattcagggactaaattaactaacagaatctgcattcaag 17497103  T
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatc 152  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  17497102 gactaaattgactaacagagactacattcacggactattttgcaatttatc 17497052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19491880 - 19491709
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||  |||||| |||| |||||||||| ||||||| ||||||||   |||||| |||||||||||||||||| ||||| ||||||||||||     
T  19491880 cagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcag 19491781  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
      ||||| |||||||||| ||| ||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  19491780 atactaagttgactaacatagtatacattcataaactattttgcaatttatctgcattcatagactaaagtg 19491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 21943818 - 21944023
Alignment:
Q  5 ccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgac 104  Q
    |||||||| |||||| |||| |||||||| | ||| |||||||| |||   | ||||||||||  ||||||||||||||||  ||| ||||||||  |||    
T  21943818 ccttgaatgtagactttgttagtcaattttagggactaaagtgattaacataatctacattcaaagactaaattgactaacaaagtatgcattcagggac 21943917  T
Q  105 taaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtga 204  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||| || ||| |||| | ||||||| | ||||||||||    
T  21943918 taaattgattaacagagtctacattcatgaactattttgcaatttatttgcattcaatgactaaaatgacgattcattttctattcagggactaaagtga 21944017  T
Q  205 ctaatc 210  Q
     |||||    
T  21944018 ttaatc 21944023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 34419687 - 34419510
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaat 101  Q
    ||||| ||||| |||||| ||||||||||||||| ||| |||| |||| ||   |||||||||| | |||||||||||||||||| ||||||| || |      
T  34419687 agtccctgaatgtagactttgttggtcaatttcagggactaaaatgaccaacagagtctacatttaaggactaaattgactaacgaagtctgcttttatc 34419588  T
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactc 179  Q
    |||||||||||||||||||   |||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  34419587 gactaaattgactaacagaacttacattcagggactattttgcaatttatctgcattctgagattaaagtgacgactc 34419510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 19564739 - 19564914
Alignment:
Q  14 tagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgac 113  Q
    |||||| || || ||||||||| ||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||| || | |||| || |||||||||    
T  19564739 tagactctggtgatcaatttcagggactaaagtgattaatggagtctacattcagagactaaattgactaacggagtatggaatcaaggaataaattgac 19564838  T
Q  114 taacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctatt 189  Q
    ||||  ||| ||||||||  |||||||||||||||||||| ||||||  |||||||||| ||||| || |||||||    
T  19564839 taacgaagtttacattcaaaaactattttgcaatttatctccattcaaggactaaagtgacgactgatttcctatt 19564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 11298165 - 11298015
Alignment:
Q  3 gtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatg 102  Q
    ||||||||||  ||||| |||| |||||||| |  ||||||||||| |||   |||||||||||||| |||||||||||||| ||||||||||||||  |    
T  11298165 gtccttgaatgaagactttgttagtcaattttaaagattaaagtgattaacagagtctacattcaggaactaaattgactaatggagtctgcattcagag 11298066  T
Q  103 actaaattgactaacagagtctacattcaggaactattttgcaatttatct 153  Q
    |||||||||||||||||||||||  |||||| | |||||||||||||||||    
T  11298065 actaaattgactaacagagtctatgttcagggattattttgcaatttatct 11298015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 30100708 - 30100842
Alignment:
Q  27 tcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctac 126  Q
    ||||||||| ||| ||||||||| ||   ||||||||||||||||||| ||||||||| ||||||||||||||  ||||||| ||| ||||||||||| |    
T  30100708 tcaatttcagggactaaagtgacaaacagagtctacattcagggactatattgactaatggagtctgcattcagggactaaagtgattaacagagtctgc 30100807  T
Q  127 attcaggaactattttgcaatttatctgcattcag 161  Q
    ||||| | ||||||||||||||||||| |||||||    
T  30100808 attcatggactattttgcaatttatctacattcag 30100842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20429948 - 20430098
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    ||||| |||||| |||||| ||||||||||||||| ||| ||||||||| ||   ||| ||||||||   |||||||| |||||| |||||||||||||     
T  20429948 cagtctttgaatgtagactctgttggtcaatttcaaggactaaagtgacgaacagagtttacattcaaaaactaaattaactaacagagtctgcattcat 20430047  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttat 151  Q
      ||||||||||||||| ||||||| |||||  ||||||||||||||||||    
T  20430048 gaactaaattgactaacggagtctatattcaaaaactattttgcaatttat 20430098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 31912292 - 31912472
Alignment:
Q  26 gtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtcta 125  Q
    |||||||||||||| ||||||||||||   |||||||| | |  |||||||||||||||||||||||| |||||| |||||||| ||  |||| | ||||    
T  31912292 gtcaatttcatggactaaagtgactaacagagtctacagtaaatgactaaattgactaacggagtctgtattcaaggactaaatcgatcaacataatcta 31912391  T
Q  126 cattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgact 206  Q
    |||||| ||| |||||| |||||||| | |||| |  ||||||| || |||||  | |||||||||  |||||||||||||    
T  31912392 cattcaagaattattttacaatttatttacatttatggactaaaatgacgacttctttcctattcagaaactaaagtgact 31912472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 21211520 - 21211419
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||||||||||  ||| ||||||||||| ||||||||||| |||||||||| | |||||| ||| ||||| | |||||||||||    
T  21211520 aaattgaccaacaaagtctacattcagagactgttttgcaatttttctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgac 21211421  T
Q  206 ta 207  Q
    ||    
T  21211420 ta 21211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 17497171 - 17497271
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||| || | |||||| ||  ||||| | |||||||||||    
T  17497171 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgac 17497270  T
Q  206 t 206  Q
    |    
T  17497271 t 17497271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 21943846 - 21943743
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||| |||||||||||| |  || ||||||||||| |||||||||||  ||||||||| | |||||| ||| ||||| | |||||||||||    
T  21943846 aaattgactaacaaagtctacattcaaggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgac 21943747  T
Q  206 taat 209  Q
    ||||    
T  21943746 taat 21943743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 19491848 - 19491952
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||  |||| ||||| | |||| | ||  ||||| |||||||||||||    
T  19491848 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgac 19491947  T
Q  206 taatc 210  Q
    |||||    
T  19491948 taatc 19491952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 12895666 - 12895579
Alignment:
Q  71 actaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcatt 158  Q
    ||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||| |  ||||||||  |||||||| |||||    
T  12895666 actaaattgactaacagagtctgcatttaaggattaaattgactaacaaagtctacattcggagactattttttaatttatcagcatt 12895579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 13753332 - 13753229
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||||||||||| ||||  ||| ||||||||||| ||||||||||  |||||||||| | |||||| | ||||| | | |||||||||||    
T  13753332 aaattgaccaacagagtctacactcagatactgttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggactaaagtgac 13753233  T
Q  206 taat 209  Q
    ||||    
T  13753232 taat 13753229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 21211495 - 21211585
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    ||||| |||||| ||||||||||||||| | | |||||||||||| | | ||||||||||| ||||||||| ||||||||| ||||||||||    
T  21211495 tgaatgtagactttgttggtcaatttcaggaactaaagtgactaacgcaatctacattcagagactaaattaactaacgga-tctgcattca 21211585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 2555615 - 2555680
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagt 171  Q
    |||||||| |||  |||||||||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  2555615 aaattgaccaacgcagtctacattcagggactgttttgcaatttttctgcatttagagactaaagt 2555680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 20429980 - 20429878
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||||||||||||||   ||| ||||||||||| ||||||| ||||| |||||| | | |||| | ||  ||||| | |||||||||||    
T  20429980 aaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgac 20429881  T
Q  206 taa 208  Q
    |||    
T  20429880 taa 20429878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 21211604 - 21211641
Alignment:
Q  135 actattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21211604 actattttgcaatttatctgcattcagggactaaagtg 21211641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 32539365 - 32539436
Alignment:
Q  27 tcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    ||||||||| ||| ||||||||||||   |||||||||||| | |||||||||||||||| ||| ||||||||    
T  32539365 tcaatttca-ggactaaagtgactaacatagtctacattcaagaactaaattgactaacgaagtatgcattca 32539436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 10760111 - 10760036
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcat 181  Q
    |||||||| |||| ||| |||||||||| ||| |||| |||||| ||| |||||||  ||||||||||| ||||||    
T  10760111 aaattgaccaacaaagtttacattcagggactgtttttcaatttctctacattcaggaactaaagtggctactcat 10760036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 43548948 - 43549014
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| |||| |||||||||||| | ||| ||||||||||| |||||| |||  ||||||||||    
T  43548948 aaattgaccaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtg 43549014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 30852789 - 30852833
Alignment:
Q  128 ttcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||||| ||||||||||| ||| ||||||| ||||||||||    
T  30852789 ttcaggaactgttttgcaatttctctccattcagtgactaaagtg 30852833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 25149309 - 25149520
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| ||||||||||||||| ||| ||||||||| || |  |||||| |||||||||||| ||||||||| |||||||||||||     
T  25149309 cagtccctgaatgtagactctgttggtcaatttcaaggactaaagtgacgaacggtgtctacgttcagggactaacttgactaacagagtctgcattcag 25149408  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||| |||||||||||||  | ||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| | ||||||    
T  25149409 agactaaattgactaacaaagtctacattcagagattattttgcagtttatctgcattcagagactatagtgacgactcatttcctattcagggactaaa 25149508  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  25149509 gtgactaatctc 25149520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 22469504 - 22469713
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| |||||  ||||| ||||||||||||||| ||||||| |||||||| | ||| || |||||||||||||||||||||| ||||| || |||||     
T  22469504 cagtccctgaatgcagactctgttggtcaatttcagggattaaggtgactaacggagttta-attcagggactaaattgactaatggagtttgaattcag 22469602  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     || |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |  |||||||||| |||||||| || |||||||  ||||||    
T  22469603 ggattaaattgactaacagaatctacattctggaactattttacaatttatctgcatttaaggactaaagtgacgactcatttcttattcatagactaaa 22469702  T
Q  201 gtgactaatct 211  Q
    |||||||||||    
T  22469703 gtgactaatct 22469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 37543885 - 37544071
Alignment:
Q  23 ttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagt 122  Q
    ||||||||||||||||| |||||||| ||| | |||||| |||||||||||||||| ||||||||| ||||||||||  || |||||||||||||| |||    
T  37543885 ttggtcaatttcatggactaaagtgattaacggagtctatattcagggactaaattaactaacggaatctgcattcagggattaaattgactaacaaagt 37543984  T
Q  123 ctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    ||||| |||   ||||||||||||||||||| ||||||| ||||||| ||||||||  | || |||||| | |||||||||||||||    
T  37543985 ctacaatcaatgactattttgcaatttatctacattcagggactaaaatggcgacttctttcatattcagggactaaagtgactaat 37544071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 23976162 - 23976370
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| |||| |||||||||| ||| ||||||||||||     ||||||||||||| |||||||||| |||||||||||||||||     
T  23976162 cagtccctgaatgtagactctgttagtcaatttcagggagtaaagtgactaacatgatctacattcaggggctaaattgaccaacggagtctgcattcag 23976261  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     | |||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||  |||||| || |||||||| || |||| | | ||||||    
T  23976262 gggctaaattgactaacagag-ctacattcagggactattttacaatttatctacattcaggaactaaaatgacgactcatttcttattga-ggactaaa 23976359  T
Q  201 gtgactaatct 211  Q
    |||||||||||    
T  23976360 gtgactaatct 23976370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 18324205 - 18324046
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| | |||| || |||||||||||||| | |||||||||||| | |||||||||| | |||||||||||||||||||||| ||||||||     
T  18324205 cagtccatgaatgtcgactctgctggtcaatttcatgaactaaagtgactaacggagtctacatttaaggactaaattgactaacggagtttgcattcag 18324106  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattca 160  Q
      |||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||    
T  18324105 gaactaaattgactaataaagtctacattcagggactattttacaatttatctgcattca 18324046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 212
Target Start/End: Complemental strand, 21124495 - 21124324
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactatt 140  Q
    |||| ||||||| | |||||||| |  ||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||||| ||  ||||||    
T  21124495 taaattgactaacggagtctacactaggggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatttagagactatt 21124396  T
Q  141 ttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    |||||||||||||| ||||||||||||||||| || ||| | ||||||||| | ||||||| | ||||||||    
T  21124395 ttgcaatttatctgtattcagagactaaagtgacgtctcctttcctattcagggactaaagcggctaatctc 21124324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 22326478 - 22326692
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaat 101  Q
    ||||||||||| |||||| | ||||||||||| | ||| |||||||| ||| | | |||||||||||| ||||||| | |||||| | ||||||||||      
T  22326478 agtccttgaatgtagactctattggtcaattttagggactaaagtgattaacggaatctacattcaggaactaaataggctaacgaaatctgcattcaga 22326577  T
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaag 201  Q
    ||||||||||| ||||| | |||| ||| | | | |||||| |||||||||||||||||  ||||||||||||| ||||| | ||||||| || |||||     
T  22326578 gactaaattgattaacaaaatctatatttaaggattattttacaatttatctgcattcaaggactaaagtggcgcctcatattctattcaggagctaaa- 22326676  T
Q  202 tgactaatctctcaat 217  Q
    ||||||||||||||||    
T  22326677 tgactaatctctcaat 22326692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 22426995 - 22426845
Alignment:
Q  60 tacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattc 159  Q
    ||||||||||||| |||||||||||  ||| || ||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  22426995 tacattcagggaccaaattgactaaaagagactacattcagggactaaattgactaacagagactacattcagggactattttgcaatttatc-gcattc 22426897  T
Q  160 agagactaaagtggcgactcatctcctattcatgaactaaagtgactaatct 211  Q
    |  ||||||||||  ||||| | ||||||||| | |||||||||||||||||    
T  22426896 atggactaaagtgatgactcgtttcctattcagggactaaagtgactaatct 22426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 35202787 - 35202638
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcaggg-actaaattgactaacggagtctgcattcaatgactaaattgactaacag 119  Q
    ||||||||||||||| | | |||||||||||| | ||||||||||||||| ||||||||||||||| || ||||||||||   ||||||||||||||||     
T  35202787 tgttggtcaatttcaggaactaaagtgactaacggagtctacattcaggggactaaattgactaacagaatctgcattcaggaactaaattgactaacat 35202688  T
Q  120 agtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
    |||||||||| | | || |||||||||||||| ||||||||| |||||||    
T  35202687 agtctacatttaaggaccattttgcaatttatttgcattcagggactaaa 35202638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 31254111 - 31253984
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaat 101  Q
    ||||||||||| ||||||  |||||| ||||||| ||||||||||||||||  || |||||||| ||||||||||||||||||| |||||||||||||      
T  31254111 agtccttgaatgtagactccgttggttaatttcagggattaaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcagg 31254012  T
Q  102 gactaaattgactaacagagtctacattca 131  Q
    ||||||||||||||||  ||||||||||||    
T  31254011 gactaaattgactaac--agtctacattca 31253984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 21184434 - 21184299
Alignment:
Q  73 taaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| |||||||||||| |||||  ||||||||||||||| | ||| || ||||||| ||||||||||||||||||||||||| | ||||| ||||    
T  21184434 taaattgattaacggagtctgtattcagggactaaattgactaata-agtttatattcagggactattttgcaatttatctgcattcggggactagagtg 21184336  T
Q  173 gcgactcatctcctattcatgaactaaagtgactaat 209  Q
     |||||||| ||||||||| | |||||||||||||||    
T  21184335 acgactcatttcctattcagggactaaagtgactaat 21184299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 24609097 - 24609285
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||| ||||||||| | ||| |  |||||||| |||||||  ||||||||||||| ||||||||| | |||| ||||||||||| ||    
T  24609097 cagtccctgaatgtagattatgttggtaatttttagagattaaagcgactaattgagtctacattcagagactaaattaattaacagagtctgcatttaa 24609196  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctatt 189  Q
      ||||||||||||||||||  |||||| || |||||||||| |||||||| |||||||||  |||||||||  ||||| | |||||||    
T  24609197 gaactaaattgactaacagaacctacatccaagaactattttacaatttatttgcattcaggaactaaagtgaagactcctttcctatt 24609285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 41358778 - 41358912
Alignment:
Q  26 gtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtcta 125  Q
    ||||||||||  || ||||||||||||  |||||||||||||| ||| ||| | || ||   ||||||||||||  ||||||||||| ||||||||||||    
T  41358778 gtcaatttcagagactaaagtgactaacaaagtctacattcagagacaaaagtaacaaataaagtctgcattcatggactaaattgattaacagagtcta 41358877  T
Q  126 cattcaggaactattttgcaatttatctgcattca 160  Q
    |||||||| ||||||||||||||||||| ||||||    
T  41358878 cattcagggactattttgcaatttatctacattca 41358912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 29585574 - 29585663
Alignment:
Q  54 gaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttg 143  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||  ||||||||||| ||||| |||||||||||||| |||||||||    
T  29585574 gaagtctacattcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattcagggactattttg 29585663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 4289021 - 4289154
Alignment:
Q  26 gtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtcta 125  Q
    |||||||||| ||||||||||||||||   ||||||||||||  ||||||||||| ||||  |||||||||| |  ||||||||||||||||| |||||     
T  4289021 gtcaatttcagggattaaagtgactaacagagtctacattcaaagactaaattgattaacatagtctgcatttagagactaaattgactaacatagtctg 4289120  T
Q  126 cattcaggaactattttgcaatttatctgcattc 159  Q
    | ||||   |||||||||||| ||||||||||||    
T  4289121 cgttcaaagactattttgcaacttatctgcattc 4289154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 12106969 - 12107114
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    ||||||||||||| |||| |||| ||||| |||| |  |||||| || | |||||||||||||||||||| | ||||||||||||||||||||||||  |    
T  12106969 ttcagggactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattcagggattattttgcaatttatctgcattcaagg 12107068  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    ||||||||| |||||  | ||||||| |   |||||||||||||||    
T  12107069 actaaagtgacgacttctttcctatttagagactaaagtgactaat 12107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21124567 - 21124430
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||||||||| |||||| ||||||||||||| ||||| ||||||| |||| | |||||||| |  ||||||||||||||||||||||||| || |       
T  21124567 cagtccttgaatgtagactctgttggtcaattttatggactaaagtggctaacggagtctacactaggggactaaattgactaacggagtctacactagg 21124468  T
Q  101 tgactaaattgactaacagagtctacattcaggaacta 138  Q
     ||||||||||||||||  ||||| |||||||| ||||    
T  21124467 ggactaaattgactaacgaagtctgcattcagggacta 21124430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 12106970 - 12106867
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||||||||||| |||| ||| ||||||||||| ||||||||||| |||||||||| | |||||| ||| ||||| | |||||||||||    
T  12106970 aaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgac 12106871  T
Q  206 taat 209  Q
    ||||    
T  12106870 taat 12106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 23976194 - 23976128
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||  |||||||||    
T  23976194 aaattgactaacagagtctacattcagggactgttttgcaatttctctgcattcaggaactaaagtg 23976128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 37494395 - 37494464
Alignment:
Q  16 gactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaac 85  Q
    |||| ||||||||||||| | ||| | || ||||||||||||||| ||||||||||||||||||||||||    
T  37494395 gactctgttggtcaattttagggagtgaattgactaatgaagtctgcattcagggactaaattgactaac 37494464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 25149341 - 25149237
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||| | ||||||||| || ||||||| | |||| | | | ||||| | |||||| ||||    
T  25149341 aaattgaccaacagagtctacattcagggactgttttgcaatttctttgcattcagggattaaagtgactactctttttccattcagggactaaaatgac 25149242  T
Q  206 taatc 210  Q
    |||||    
T  25149241 taatc 25149237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 21124535 - 21124638
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||||||||||||||| | ||| ||||||||||| ||| |||||||  | ||||||| | |||| | ||  ||||| |||||||||||||    
T  21124535 aaattgaccaacagagtctacattcaaggactgttttgcaatttctctacattcaggaattaaagtgactactcctttctcattcaagaactaaagtgac 21124634  T
Q  206 taat 209  Q
    ||||    
T  21124635 taat 21124638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 21185861 - 21185794
Alignment:
Q  10 aatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaat 77  Q
    |||||||||| ||||||||||||||||||| ||||||||||||   ||| |||||||||| |||||||    
T  21185861 aatatagactctgttggtcaatttcatggactaaagtgactaactgagtgtacattcaggtactaaat 21185794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 22469536 - 22469433
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||||||| |||||||| ||| ||||||||||| ||| |||||||  || |||||||| |||| | ||| ||||| | | |||||||||    
T  22469536 aaattgaccaacagagtctgcattcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcccattcagggattaaagtgac 22469437  T
Q  206 taat 209  Q
    ||||    
T  22469436 taat 22469433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12106938 - 12107036
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    |||||| || || |||||| ||||||||||||||| ||| ||||||||| || | |||||||||| ||||||||| || | |||| |||||| ||||||    
T  12106938 cagtccctggatgtagactctgttggtcaatttcagggactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattca 12107036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 23625141 - 23625071
Alignment:
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||||||| |||||||||| |||||||| |||||||| |||| ||| || |||||| ||||||||||    
T  23625141 gactaaattgaccaacagagtctgcattcaggtactattttacaatctatttgtattcagggactaaagtg 23625071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 22326509 - 22326446
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
    |||||||| || |||||||||||||| | |||||||| |||||| || ||||||||||||||||    
T  22326509 aaattgaccaatagagtctacattcaaggactattttacaatttctcagcattcagagactaaa 22326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 35202775 - 35202841
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| ||||||||  ||||||||| ||| ||||||||||| |||||||||||  |||||||||    
T  35202775 aaattgaccaacagagtaaacattcagggactgttttgcaatttctctgcattcaggaactaaagtg 35202841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 18324173 - 18324236
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
    |||||||| | ||||||| ||||||| | ||| ||||||||||| ||||||||||| |||||||    
T  18324173 aaattgaccagcagagtcgacattcatggactgttttgcaatttctctgcattcagggactaaa 18324236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 31254081 - 31254007
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaacta 138  Q
    |||||||| |||| ||||||||  | ||| |||| |  ||||||||||||||||||||||| |||||||| ||||    
T  31254081 ttcagggattaaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcagggacta 31254007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 37494422 - 37494467
Alignment:
Q  75 aattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    |||||||||| | ||||||||||||  |||||||||||||||||||    
T  37494422 aattgactaatgaagtctgcattcagggactaaattgactaacaga 37494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 10289383 - 10289279
Alignment:
Q  24 tggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtc 123  Q
    |||||||||| | ||  |||||||||||| ||||| | ||||||  ||||||||||| |||  |||||| ||||||| || |||||||||||| |||||     
T  10289383 tggtcaattttaagggctaaagtgactaacgaagtttgcattcaaagactaaattgattaa--gagtctacattcaa-gattaaattgactaagagagtt 10289287  T
Q  124 tacattca 131  Q
    | ||||||    
T  10289286 tgcattca 10289279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 10289386 - 10289426
Alignment:
Q  118 agagtctacattcaggaactattttgcaatttatctgcatt 158  Q
    |||||||||||||||||||| |||| |||||| ||||||||    
T  10289386 agagtctacattcaggaactgttttacaatttctctgcatt 10289426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 22426964 - 22426924
Alignment:
Q  59 ctacattcagggactaaattgactaacggagtctgcattca 99  Q
    ||||||||||||||||||||||||||| ||| || ||||||    
T  22426964 ctacattcagggactaaattgactaacagagactacattca 22426924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18830645 - 18830816
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||| | ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||     
T  18830645 cagtccctgaatgtagattctgttggtcaatttcagggactaaagtgactaatggagtctacattcagggactaaattgactaacgaagtctgcattcag 18830744  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
     |||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  18830745 ggactaaatggactaacagaatctacattcaaggactattttgcaatttatctgcattcagggactaaagtg 18830816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2634095 - 2634306
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| | |||||||||||||  || |||||||| |||  ||||||||||||||||||||||||||| ||| |||||||||||||     
T  2634095 cagtccctgaatgtagactttattggtcaatttcagcgactaaagtgattaacaaagtctacattcagggactaaattgacgaacagagtctgcattcag 2634194  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     |||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| ||||||||||  ||||||| || |||| | | ||||||    
T  2634195 ggactaaattgactaacagagtctacattcagagactatttagcaatttatctacattcagtgactaaagtgaagactcatttcttatttaaggactaaa 2634294  T
Q  201 gtgactaatctc 212  Q
    ||||||||||||    
T  2634295 gtgactaatctc 2634306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 215
Target Start/End: Original strand, 55382667 - 55382841
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactatt 140  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||| |  ||| ||||||||||||| |||||||||||||  ||||||    
T  55382667 taaagtgactaacggagtctacatccagggactaaattgactaacggaatctgcatttagggacaaaattgactaacaaagtctacattcagagactatt 55382766  T
Q  141 ttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctctca 215  Q
    ||||||||||||||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||    
T  55382767 ttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggactaaagtgactaatctctca 55382841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 5448404 - 5448195
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| || ||| ||||||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||     
T  5448404 cagtccctgaatgtaaactctgttggtcaatttcaggaactaaagtgactaatgaagtctatattcagggactaaattgaccaacggagtctgcatccag 5448305  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||| ||||||| ||  ||||| | ||||||||| | | ||||    
T  5448304 ggactaaattgactaacagagtttacattcaggggctattttacaatttatctgcattcagggactaaaatgatgactcctttcctattcagggaataaa 5448205  T
Q  201 gtgactaatc 210  Q
    | ||||||||    
T  5448204 gggactaatc 5448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 10380686 - 10380877
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||||| ||| ||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||  || ||||||||||||||||    
T  10380686 tgttggtcaatttcagggactaaagtgactaactgagtctacatttagggactaaattgactaacgaagtctgcattcagggattaaattgactaacaga 10380785  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||||||| ||  |||||||||||||||||||| |||||| | |||||||  ||||| || | ||||||| | ||||||||||||||||||    
T  10380786 gtctacatttagagactattttgcaatttatctgaattcaggggctaaagttacgacttattttctattcaaggactaaagtgactaatctc 10380877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 30470909 - 30471100
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||||| ||| ||||||||||||   ||||||||||||  ||||||||||| ||||||||||||||||||  ||||||||||| ||||| |    
T  30470909 tgttggtcaatttcagggactaaagtgactaacagagtctacattcaatgactaaattgattaacggagtctgcattcagggactaaattgattaacata 30471008  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||||||||||||| |||||||| |||||||||| |||||||  ||||||||| |||||| | | |||||||   ||||||||||||||||||    
T  30471009 gtctacattcagggactattttacaatttatctacattcaggaactaaagtgacgactctttttctattcagagactaaagtgactaatctc 30471100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 18836370 - 18836521
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||    
T  18836370 tgttggtcaattttatggactaaagtgactaatggagtctacattcagggactaaa-tgactaacggagtctgcattcagggactaaatggactaacaga 18836468  T
Q  121 gtctacattcaggaacta-ttttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||| |||||| | || ||||||||||| ||||||||||| ||||||||||    
T  18836469 gtctacgttcagggattacttttgcaatttttctgcattcagggactaaagtg 18836521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 37695034 - 37695213
Alignment:
Q  32 ttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattca 131  Q
    |||| ||| |||| ||||||| |  |||| |||| ||||| ||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  37695034 ttcagggactaaattgactaacggggtctgcatttagggattaaattgactaacagagtctgcattcaacgattaaattgactaacagagtctacattca 37695133  T
Q  132 ggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatct 211  Q
    |  | ||||||||||||||||||||||||  ||||||||||  ||||||| |||| |||||||||||||||||| |||||    
T  37695134 gagattattttgcaatttatctgcattcaaggactaaagtgatgactcatttccttttcatgaactaaagtgaccaatct 37695213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 2063354 - 2063144
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| ||||||||||||| |  || ||||||||||||  || |||||||| |||||||||||||||||||||||| ||||||||     
T  2063354 cagtccctgaatgtagactctgttggtcaattttaaagactaaagtgactaacaaattctacatttagggactaaattgactaacggagtttgcattcag 2063255  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||| ||| ||||||||   ||||||||  ||||||||||||||||   || |||||| |||||||| |||| |||| | ||||||    
T  2063254 agactaaattgactaacatagtttacattcaatgactattttataatttatctgcattcaagaaccaaagtgccgactcatttcctcttcagggactaaa 2063155  T
Q  201 gtgactaatct 211  Q
    |||||||||||    
T  2063154 gtgactaatct 2063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 47943520 - 47943730
Alignment:
Q  2 agtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaat 101  Q
    |||| |||||| |||| | ||||||||||||| | ||| || ||||| |||   |||||||||||||||| |||||||||||||||   ||||||||||     
T  47943520 agtcattgaatgtagattttgttggtcaattttagggactatagtgattaacatagtctacattcagggattaaattgactaacggttcctgcattcaag 47943619  T
Q  102 gactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaag 201  Q
     |||||||||||||||  |||||||||||||| |||||||||||||||||||||||| |  |||||||||| |||||||| ||||||||| | ||||||     
T  47943620 aactaaattgactaaccaagtctacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcctattcagggactaaaa 47943719  T
Q  202 tgactaatctc 212  Q
     ||||||||||    
T  47943720 cgactaatctc 47943730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 11821924 - 11821754
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||||| ||||||||||||||| ||| ||||||||||||   ||||||||||||  ||||||||||||||||| | ||||||||||  ||||||    
T  11821924 tgaatttagactttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacgaaatctgcattcagggactaa 11821825  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgact 178  Q
    ||| ||||||||||||||||||||   |||||||||||||||||||| ||| |  |||||||||| |||||    
T  11821824 attaactaacagagtctacattcaaagactattttgcaatttatctgtatttaaggactaaagtgacgact 11821754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 22017984 - 22018132
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    |||| |||||||| ||| ||||||||| | ||||||  |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  22017984 ttcaaggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggactattttgcaatttatctgcattcagag 22018083  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    || ||| || |||||||| ||||||| | | ||||||||||||||||||    
T  22018084 acgaaaatgacgactcatttcctatttagggactaaagtgactaatctc 22018132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 9826840 - 9826669
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||  |||||| |||| |||||||||| ||||||| ||||||||   |||||| ||||||||| |||||||| ||||| ||||||||||||     
T  9826840 cagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattcagggattaaattgattaacgaagtctgcattcag 9826741  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
      ||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  9826740 atactaagttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtg 9826669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 29909034 - 29908887
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagag 163  Q
    |||||| |||||| ||| ||| ||| ||| ||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||| |    
T  29909034 ttcaggaactaaagtgaataatggactctacattcaacgactaaattgactaacggagtctgcattcatgaactattttgcaatttatctgcatccagtg 29908935  T
Q  164 actaaagtggcgactcatctcctattcatgaactaaagtgactaatct 211  Q
    ||||||||| |||||||| ||||||||| | |  ||||||||||||||    
T  29908934 actaaagtgacgactcatttcctattcaaggatcaaagtgactaatct 29908887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 5324754 - 5324904
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    ||||| |||||| |||||| ||||||||||||||| ||| ||||||||| ||   ||| |||||||| ||||||||||||||||| |||||||||||||     
T  5324754 cagtctttgaatgtagactctgttggtcaatttcagggactaaagtgacgaacagagtttacattcaaggactaaattgactaacagagtctgcattcat 5324853  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttat 151  Q
      |||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  5324854 gaactaaattgactaacagagtctgcaatcagaaactattttacaatttat 5324904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 3370132 - 3370013
Alignment:
Q  42 aaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattt 141  Q
    ||||||||||||  |||||||||| || ||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||| |   |||||||    
T  3370132 aaagtgactaatagagtctacattaagagactaaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatttaatgactattt 3370033  T
Q  142 tgcaatttatctgcattcag 161  Q
    ||||||||||||| ||||||    
T  3370032 tgcaatttatctggattcag 3370013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 30378927 - 30378779
Alignment:
Q  23 ttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagt 122  Q
    |||||||||||||   | |||||||||||| | |||||| ||||||||||| ||||||||||| |||||||||||||  |||| ||||||||||||||||    
T  30378927 ttggtcaatttcagacactaaagtgactaacggagtcta-attcagggactgaattgactaacagagtctgcattcagagactgaattgactaacagagt 30378829  T
Q  123 ctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    || |||||||  ||||||||||||||||| | ||| ||| ||||||||||    
T  30378828 ctgcattcagagactattttgcaatttatttacatccagggactaaagtg 30378779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 10757641 - 10757765
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| || || |||||||||||||||||| ||| |||||| ||||| |||   ||||||||||||||||||||||||||||||||||||||||||||     
T  10757641 cagtccatggatgtagactatgttggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcag 10757740  T
Q  101 tgactaaattgactaacagagtcta 125  Q
     |||||||||  |||||||||||||    
T  10757741 ggactaaattcgctaacagagtcta 10757765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 10970812 - 10970936
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| || || |||||||||||||||||| ||| |||||| ||||| |||   ||||||||||||||||||||||||||||||||||||||||||||     
T  10970812 cagtccatggatgtagactatgttggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcag 10970911  T
Q  101 tgactaaattgactaacagagtcta 125  Q
     |||||||||  |||||||||||||    
T  10970912 ggactaaattcgctaacagagtcta 10970936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 47144888 - 47144760
Alignment:
Q  10 aatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaat 109  Q
    |||||| ||| |||| |||||||||| ||| ||||||||| || | ||||| |||||||| |||||||||| |||||||||||  |||||| ||||||||    
T  47144888 aatataaactttgttagtcaatttcaaggactaaagtgaccaacggagtctgcattcaggaactaaattgattaacggagtctttattcaaggactaaat 47144789  T
Q  110 tgactaacagagtctacattcaggaacta 138  Q
    |||||||| ||||||||||||||||||||    
T  47144788 tgactaactgagtctacattcaggaacta 47144760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 212
Target Start/End: Original strand, 1387453 - 1387625
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca-atgactaaattgactaacagagtctacattcaggaactat 139  Q
    ||||||||||||  |||||||||||||| |||||||||||||||| |||||||||||||   |||||||||||  |||| | |||||||||||| | |||    
T  1387453 taaagtgactaacaaagtctacattcagcgactaaattgactaacagagtctgcattcaggggactaaattgatgaacaaaatctacattcagggaatat 1387552  T
Q  140 tttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||| |||||||||||||||||| | ||||| ||  || |  | ||||||||| | |||||||| |||||||||    
T  1387553 tttacaatttatctgcattcagggcctaaaatgatgatttctttcctattcagggactaaagtaactaatctc 1387625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37694971 - 37695101
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||| | ||||||||||||| |  || |||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||| |     
T  37694971 cagtccctgaatgtagattgtgttggtcaatttaagtgactaaagtgactaatagagtctatattcagggactaaattgactaacggggtctgcatttag 37695070  T
Q  101 tgactaaattgactaacagagtctacattca 131  Q
     || |||||||||||||||||||| ||||||    
T  37695071 ggattaaattgactaacagagtctgcattca 37695101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 2232463 - 2232612
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||||| ||| |||||||| |||  ||||||||||||||||||||||||| ||||| |||||| ||  ||  || |||||||||||||| |    
T  2232463 tgttggtcaatttcagggactaaagtgattaaa-aagtctacattcagggactaaattggctaacagagtct-caaccagggattaaattgactaacata 2232560  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||| | | |||||||| |||||||| | |||| || ||||||||||    
T  2232561 gtctacattgaaggactattttacaatttatttacatttagggactaaagtg 2232612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 18500786 - 18500594
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    |||||||||||||||  || |||||||| |||   |||||| ||||||||||||||||||||||| |||||| ||||||  || ||||||| |||| | |    
T  18500786 tgttggtcaatttcagagactaaagtgattaacagagtctaaattcagggactaaattgactaacagagtctacattcagggattaaattggctaatata 18500687  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctctc 214  Q
    || |||||| |  || |||||| |||| ||| || |||| ||||||||| || |||||| | ||||||| | | | ||||||||||||||||||    
T  18500686 gtttacatttaaaaattatttttcaatctatttgtattctgagactaaaatgacgactc-tttcctattgaggcaataaagtgactaatctctc 18500594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 1387389 - 1387480
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcag 132  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||| || ||||||||   |||||| ||||||||| |||||||||||||    
T  1387389 taaagtgactaacgaagtctacattccggaactaaattgactaacggggtttgcattcaggaactaaagtgactaacaaagtctacattcag 1387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 47463908 - 47463814
Alignment:
Q  115 aacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||| |||||||||| | |||||| ||| || || | |||||||||||||||    
T  47463908 aacagagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatccagggactaaagtgactaat 47463814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 212
Target Start/End: Original strand, 8951129 - 8951270
Alignment:
Q  71 actaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaag 170  Q
    |||||| ||||||||| ||||| |||| |   |||||||||||||||| | ||||||||||||||||||||| | ||||||||  ||||||  ||||| |    
T  8951129 actaaaatgactaacgaagtctacattaaggaactaaattgactaacaaaatctacattcaggaactattttaccatttatctatattcaggaactaatg 8951228  T
Q  171 tggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    || ||| || | ||||||| ||| |||||| | |||||||||    
T  8951229 tgacgattcctttcctattgatggactaaattaactaatctc 8951270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 2063322 - 2063425
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||||||||||||||||| |||  |||||||||| |||||| |||  || ||||||| | |||||| ||| ||||| | |||||||||||    
T  2063322 aaattgaccaacagagtctacattcagggactgctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggactaaagtgac 2063421  T
Q  206 taat 209  Q
    ||||    
T  2063422 taat 2063425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12140738 - 12140837
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| | |||||||||| ||||  ||||||| | ||| |||| |||||||  || |||||||||| |||||||||||||||||||||||| |||||||    
T  12140738 cagtccctaaatatagactttgttaatcaattttagggactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattcaa 12140837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 18830677 - 18830575
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||| |||||||||||| ||| ||| ||||||||||||||| ||| |||||||||| | |||||| ||  ||||| | |||||||||||    
T  18830677 aaattgaccaacagaatctacattcagggactgtttagcaatttatctgcatccag-gactaaagtgactactcatttctcattcagggactaaagtgac 18830579  T
Q  206 taat 209  Q
    ||||    
T  18830578 taat 18830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 5448372 - 5448438
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    |||||||| |||||||| |||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  5448372 aaattgaccaacagagtttacattcagggactgttttgcaatttctctgcattcagggactaaagtg 5448438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 3370101 - 3370036
Alignment:
Q  41 taaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgacta 106  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||| |||||| |||| ||||||||    
T  3370101 taaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatttaatgacta 3370036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 10757671 - 10757570
Alignment:
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    |||||| |||| ||||||||| || | ||| ||||||||||||||| ||||||| |||||||||| | |||||| ||  ||||| | |||||||||||||    
T  10757671 attgaccaacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgacta 10757572  T
Q  208 at 209  Q
    ||    
T  10757571 at 10757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 10970842 - 10970741
Alignment:
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    |||||| |||| ||||||||| || | ||| ||||||||||||||| ||||||| |||||||||| | |||||| ||  ||||| | |||||||||||||    
T  10970842 attgaccaacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgacta 10970743  T
Q  208 at 209  Q
    ||    
T  10970742 at 10970741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 12140772 - 12140917
Alignment:
Q  67 agggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagact 166  Q
    |||||||||| ||||||||  | ||| ||||||| |||||||||||||||| |||||||||||||  |||| |||||| || ||| | |||||||| ||     
T  12140772 agggactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattcaaaaactgttttgcgatatattttcattcagaaacc 12140871  T
Q  167 aaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||| || ||| |||| || | ||||  ||||||| ||||| |||||    
T  12140872 aaaatgacgattcatttcttgttcaaaaactaaaatgactgatctc 12140917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 47463916 - 47463977
Alignment:
Q  157 ttcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctctcaatt 218  Q
    ||||| |||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||    
T  47463916 ttcagggactaaagtgacgactcatttcctattcaggaactaaagtgactaatctcccaatt 47463977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 9826808 - 9826912
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||   ||| ||||| | |||| | ||  ||||| |||||||||||||    
T  9826808 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgac 9826907  T
Q  206 taatc 210  Q
    |||||    
T  9826908 taatc 9826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 22017985 - 22017885
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||| | |||||||||| ||| ||||||||||| ||||||||||| |||||||||| | |||| | ||| ||||| | | |||||||||    
T  22017985 aaattgaccaacagaatatacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttcccattcagggattaaagtgac 22017886  T
Q  206 t 206  Q
    |    
T  22017885 t 22017885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 29909039 - 29908967
Alignment:
Q  27 tcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    ||||||||| | | |||||||| ||||| | ||||||||||  ||||||||||||||||||||||||||||||    
T  29909039 tcaatttcaggaactaaagtgaataatggactctacattcaacgactaaattgactaacggagtctgcattca 29908967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 1387442 - 1387513
Alignment:
Q  62 cattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcagg 133  Q
    |||||||| |||||| ||||||||  ||||| ||||||  ||||||||||||||||||||||| ||||||||    
T  1387442 cattcaggaactaaagtgactaacaaagtctacattcagcgactaaattgactaacagagtctgcattcagg 1387513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 37695004 - 37694937
Alignment:
Q  105 taaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||| |||| | |||||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  37695004 taaattgaccaacacaatctacattcagggactgttttgcaatttctctgcattcagggactaaagtg 37694937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 3391183 - 3391249
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||||||| ||||||||||||   | | ||||||||||| ||||||||||||||||||||||    
T  3391183 aaattgactaacaaagtctacattcaatgattgttttgcaatttctctgcattcagagactaaagtg 3391249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 2634127 - 2634024
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| || | |||||||||||||| ||| ||||||||||| || |||||| | | |||||||| | |||| | ||  ||||||| |||||||||||    
T  2634127 aaattgaccaataaagtctacattcagggactgttttgcaatttctcagcattcggcggctaaagtgactactcttttctcattcatggactaaagtgac 2634028  T
Q  206 taat 209  Q
    ||||    
T  2634027 taat 2634024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 5324786 - 5324684
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| |||||||||||||||||   ||| ||||||||||| ||||||| ||||| |||||| | | |||| | ||  ||||| | |||||||||||    
T  5324786 aaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgac 5324687  T
Q  206 taa 208  Q
    |||    
T  5324686 taa 5324684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 22017973 - 22018051
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    ||||||||||||||| ||| |||||||| ||| | ||| ||||||||| |||||||| |||||||  ||||| ||||||    
T  22017973 tgttggtcaatttcaaggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattca 22018051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8951091 - 8951175
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaac 85  Q
    ||||| |||||| ||||||  |||||||||||| |   | |||| ||||||| |||||||||||| ||| |||||||||||||||    
T  8951091 cagtctttgaatgtagactcagttggtcaatttaagaaactaaaatgactaacgaagtctacattaaggaactaaattgactaac 8951175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 10757673 - 10757746
Alignment:
Q  65 tcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaacta 138  Q
    ||||||| || | ||| |||| |||||| ||||||  |||||||||||||||| |||||| |||||||| ||||    
T  10757673 tcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggacta 10757746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 10970844 - 10970917
Alignment:
Q  65 tcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaacta 138  Q
    ||||||| || | ||| |||| |||||| ||||||  |||||||||||||||| |||||| |||||||| ||||    
T  10970844 tcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggacta 10970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 30378948 - 30379017
Alignment:
Q  140 tttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    |||||||||| |||||||| || |||||||||| | |||||| ||||||| |   |||||||||||||||    
T  30378948 tttgcaatttctctgcattaagggactaaagtgactactcatttcctatttagagactaaagtgactaat 30379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 24093 - 23889
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||| | |||||||||||||||||||  |||||||| ||| ||||||||||||| ||||||||||||| ||| |||||||||||||  ||||||    
T  24093 tgaatgtagattctgttggtcaatttcatggacaaaagtgacgaataaagtctacattcaaggactaaattgaccaacagagtctgcattcagggactaa 23994  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    ||||||||||  ||||||||||| || || ||||||||||||||||  |||||  |||||||| | |||||||| ||||||| | |||||||||||||||    
T  23993 attgactaacgtagtctacattcggggaccattttgcaatttatctatattcaaggactaaagggacgactcatttcctatttaggaactaaagtgacta 23894  T
Q  208 atctc 212  Q
    |||||    
T  23893 atctc 23889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 24068 - 24131
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
    |||||||| |||||| |||||||||||| | | ||||||||||| ||||||||||| |||||||    
T  24068 aaattgaccaacagaatctacattcagggattgttttgcaatttctctgcattcagggactaaa 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 39598578 - 39598746
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||| |||||| |||| |||||||| | ||| |||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||     
T  39598578 cagttcttgaatgtagactttgttagtcaattttagggactaaagtgactaacggagtctacattcagggactaaattgactaacggagtatacattcag 39598677  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaa 169  Q
     |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  39598678 cgactaaattgaccaacaaagtctacattcagggactattttgcaatttatctgcattcagtgactaaa 39598746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 31499441 - 31499592
Alignment:
Q  21 tgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacaga 120  Q
    ||||||||||||||| |||  |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  31499441 tgttggtcaatttcagggaccaaagtgacaaataaagtctacattcaaggactaaattgactaacggagtctgcattcagaaactaaaatgactaacaga 31499540  T
Q  121 gtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
     |||||||||||| |||||||| |||||||||| |||||| ||| |||||||    
T  31499541 ttctacattcagggactattttacaatttatctacattcaaagattaaagtg 31499592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 190
Target Start/End: Complemental strand, 22093061 - 22092879
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||| | |||||||||| |||| ||| ||||||||| || | |||||| ||||||||||||||||||| || ||||||||||||||   |||||    
T  22093061 tgaatgtagattctgttggtcaaattcagggactaaagtgacaaacggagtctatattcagggactaaattgacgaatggagtctgcattcaggaactaa 22092962  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattc 190  Q
    | |||||||||||||||||||||||| |||||||| ||||||||||||| |||  |||||||||| |||||| | ||||||||    
T  22092961 actgactaacagagtctacattcagggactattttacaatttatctgcaatcaaggactaaagtgacgactcctttcctattc 22092879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 31820115 - 31819903
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||| | |||| |||||||| | ||| |||||||| ||| | ||| ||||||||| |||||||||||||||   ||||||||||||| ||||||    
T  31820115 tgaatgtagattctgttagtcaattttagggactaaagtgattaacggagtatacattcagagactaaattgactaagaaagtctgcattcaaggactaa 31820016  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    || ||||||||||||||||||||||  |||||||| ||||||||||||||| || ||||||| || ||| || | ||||||||  | |||||||||||||    
T  31820015 atggactaacagagtctacattcagtgactattttccaatttatctgcatttagggactaaaatgacgattcctttcctattc-gggactaaagtgacta 31819917  T
Q  208 atctctcaattaat 221  Q
    ||||| ||| ||||    
T  31819916 atctcccaaataat 31819903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 32092862 - 32092969
Alignment:
Q  65 tcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagaga 164  Q
    ||||| |||||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||    
T  32092862 tcaggaactaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggactatttttcaatttatctgcattcaggga 32092961  T
Q  165 ctaaagtg 172  Q
    ||||||||    
T  32092962 ctaaagtg 32092969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 24006951 - 24007159
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||| ||||| |||||| ||||  |||||||||  || |||| ||| |||   |||||||||||||| |||| |||||  |||||| ||||||||||     
T  24006951 cagtccctgaatgtagactctgttactcaatttcagagactaaaatgattaacagagtctacattcaggtactacattgatcaacggaatctgcattcat 24007050  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     ||||||||||||||||||||||||||||||    ||||||| ||||||||||| |||||  |||||||||  |||||||| ||||| ||| | || |||    
T  24007051 ggactaaattgactaacagagtctacattcaaagtctattttacaatttatctgtattcaaggactaaagtaacgactcatttcctagtcaaggaccaaa 24007150  T
Q  201 gtgactaat 209  Q
    |||||||||    
T  24007151 gtgactaat 24007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 8219304 - 8219193
Alignment:
Q  44 agtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttg 143  Q
    ||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| | ||||||||     
T  8219304 agtgactaacggagtccacattcagggattaaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattcaag-actatttta 8219206  T
Q  144 caatttatctgca 156  Q
    |||||||| ||||    
T  8219205 caatttatttgca 8219193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 32092860 - 32092759
Alignment:
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    |||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||| | |||||| ||| ||||| | |||||||||||||    
T  32092860 attgacaaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgacta 32092761  T
Q  208 at 209  Q
    ||    
T  32092760 at 32092759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32092830 - 32092928
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattca 99  Q
    |||||| ||||| |||||| |||| |||||| ||| | | |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  32092830 cagtccctgaatgtagactctgtttgtcaatctcaggaactaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattca 32092928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 24006983 - 24006917
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  24006983 aaattgagtaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtg 24006917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 31820090 - 31820191
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||| |||||||||| ||||| ||||| | ||| |||| ||||||| |||||| || | | |||| |   |||||||||||||||||||    
T  31820090 aaattgactaacagaatctacattcatgaactgttttgtattttctctgtattcagaaactaaaatgactattcatttttcattcatgaactaaagtgac 31820189  T
Q  206 ta 207  Q
    ||    
T  31820190 ta 31820191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 8219284 - 8219216
Alignment:
Q  32 ttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| |||||||| ||||||| | ||||| |||||||  ||||||||||||||| |||||| |||||||    
T  8219284 ttcagggattaaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattcaa 8219216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 22093039 - 22093139
Alignment:
Q  109 ttgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaa 208  Q
    ||||| |||||| |||||||||||  ||| ||||||||||| ||| ||||||| |||||||||  | | |||| | | ||||| |||||||||||| |||    
T  22093039 ttgaccaacagaatctacattcagagactgttttgcaatttctctacattcagggactaaagtaactaatcattttccattcaggaactaaagtgattaa 22093138  T
Q  209 t 209  Q
    |    
T  22093139 t 22093139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 17914175 - 17914097
Alignment:
Q  7 ttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaac 85  Q
    |||||| |||||| | || |||||||| |  |||||||||||||||  || |||||||| |||| ||||||||||||||    
T  17914175 ttgaatgtagactctattagtcaattttagtgattaaagtgactaacaaaatctacatttagggtctaaattgactaac 17914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 17914149 - 17914202
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattc 159  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||| ||| |||||    
T  17914149 aaattgactaatagagtctacattcaaaaactgttttgcaatttctctacattc 17914202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 314273 - 314126
Alignment:
Q  14 tagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgac 113  Q
    |||||| ||||||| ||||||| ||| ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  314273 tagactctgttggttaatttcagggactaaagtgactaacagactctacattcagggactaaattgactaacggagtctgcattcagggactaaattgac 314174  T
Q  114 taacagagtctacattcaggaactattttgcaatttatctgcattcag 161  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  314173 taacagagtctacatttagggactattttgcaattaatctgcattcag 314126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 57657 - 57486
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||  |||||| |||| |||||||||| ||||||| ||||||||   |||||| |||||||||||||||||| ||||| ||||||||||||     
T  57657 cagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcag 57558  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
      ||||| |||||||||| ||| ||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  57557 atactaagttgactaacatagtatacattcagaaactatttttcaatttatctgcattcatggactaaagtg 57486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 57625 - 57729
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| |||||||| |   ||| ||||| | |||| | ||  ||||| |||||||||||||    
T  57625 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattaaagtacttaagtgactactcttttctgattcaggaactaaagtgac 57724  T
Q  206 taatc 210  Q
    |||||    
T  57725 taatc 57729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 212
Target Start/End: Complemental strand, 15516 - 15362
Alignment:
Q  58 tctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcat 157  Q
    ||||||||||| |||||||||| |||||||||||| ||||||  || ||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  15516 tctacattcagagactaaattggctaacggagtctacattcagagattaaattgactaacagagtctacattcagagactattttacaatttatctgcat 15417  T
Q  158 tcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    |||  |||||||||| | |||||| ||  |||||   ||||||||||||||||||    
T  15416 tcaaggactaaagtgacaactcatttctaattcaaagactaaagtgactaatctc 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 15569 - 15638
Alignment:
Q  139 ttttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaa 208  Q
    ||||||||||| ||||||||||||||||||| || |  ||  ||||| ||||||| |||||||| |||||    
T  15569 ttttgcaatttctctgcattcagagactaaattgacttctattctcccattcatggactaaagtcactaa 15638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 128012 - 127841
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||| ||||||  |||||| |||| |||||||||| ||||||| ||||||||   |||||| |||| |||| |||||||| ||||| ||||||||||||     
T  128012 cagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcag 127913  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
      ||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  127912 atactaagttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtg 127841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 127980 - 128084
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||   ||| ||||| | |||| | ||  ||||| |||||||||||||    
T  127980 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgac 128079  T
Q  206 taatc 210  Q
    |||||    
T  128080 taatc 128084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 1558 - 1357
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaa 100  Q
    |||||||||||  |||||| |||| |||||||||| ||||||| |||||||||  ||||||||||||||||||||||| ||||||| ||||||||||||     
T  1558 cagtccttgaacgtagactctgttagtcaatttcaaggattaatgtgactaattgagtctacattcagggactaaattaactaacgaagtctgcattcag 1459  T
Q  101 tgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaa 200  Q
     |||||| |||| ||||| ||| ||     ||  |||||||||||||||||||||||| || ||||||||||   | | || ||||||||| | ||||||    
T  1458 agactaagttgattaacatagtata-----ag--actattttgcaatttatctgcatttagggactaaagtgataatttatttcctattcaaggactaaa 1366  T
Q  201 gtgactaat 209  Q
    |||||||||    
T  1365 gtgactaat 1357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 1526 - 1630
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||  |||| ||||| | |||| | ||  ||||| |||||||||||||    
T  1526 aaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgac 1625  T
Q  206 taatc 210  Q
    |||||    
T  1626 taatc 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 73; Significance: 2e-33; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 969 - 1109
Alignment:
Q  32 ttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattca 131  Q
    |||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||| | ||||||||||  ||||||||||| ||| | ||||||| ||||    
T  969 ttcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttca 1068  T
Q  132 ggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    || ||||||||| ||||||| ||||||||  ||||||||||    
T  1069 gggactattttgtaatttatttgcattcaaggactaaagtg 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 7433 - 7573
Alignment:
Q  32 ttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattca 131  Q
    |||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||| | ||||||||||  ||||||||||| ||| | ||||||| ||||    
T  7433 ttcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttca 7532  T
Q  132 ggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    || ||||||||| ||||||| ||||||||  ||||||||||    
T  7533 gggactattttgtaatttatttgcattcaaggactaaagtg 7573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 913 - 1043
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||||| | || |||||||||| ||| ||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||  ||||||    
T  913 tgaatgtagactctattagtcaatttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggactaa 1012  T
Q  108 attgactaacagagtctacattcaggaacta 138  Q
    ||||||||||  | ||| |||||||| ||||    
T  1013 attgactaacgaaatctgcattcagggacta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 7377 - 7507
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||||| | || |||||||||| ||| ||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||  ||||||    
T  7377 tgaatgtagactctattagtcaatttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggactaa 7476  T
Q  108 attgactaacagagtctacattcaggaacta 138  Q
    ||||||||||  | ||| |||||||| ||||    
T  7477 attgactaacgaaatctgcattcagggacta 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 938 - 873
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||    
T  938 aaattgactaatagagtctacattcagga-ctgttttgcaatttctctgcattcagggactaaagtg 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 7402 - 7337
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||    
T  7402 aaattgactaatagagtctacattcagga-ctgttttgcaatttctctgcattcagggactaaagtg 7337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 190256 - 190459
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaa 107  Q
    ||||| |||||| ||||||||||||||| |||||||| ||| |||   ||| |||||| ||||||||||||||||||| ||||||| |||||   |||||    
T  190256 tgaatgtagactctgttggtcaatttcagggattaaattgattaacatagtttacatttagggactaaattgactaacagagtctgtattcaggaactaa 190355  T
Q  108 attgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgacta 207  Q
    ||||||||||| |||||  ||| || |||||||||||||||||||| ||||||| || |||||   ||| || | | ||||||| |||||||| ||||||    
T  190356 attgactaacaaagtctgtatttagaaactattttgcaatttatctacattcagggattaaaggaacgattctttttctattcaggaactaaa-tgacta 190454  T
Q  208 atctc 212  Q
    |||||    
T  190455 atctc 190459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 190281 - 190178
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||| || | |||| | ||| ||||| | |||||| ||||    
T  190281 aaattgaccaacagagtctacattcagagactgttttgcaatttctctgcattcagagactaaaatgactactcttttcccattcagggactaaaatgac 190182  T
Q  206 taat 209  Q
    ||||    
T  190181 taat 190178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 11747 - 11603
Alignment:
Q  67 agggactaaattgactaacggagtctgcattcaatgactaaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagact 166  Q
    |||||||||| |||||||| || | | ||||||  || ||||||| |||||| |||||||||||||| |||||||| ||||||||||||||| || ||||    
T  11747 agggactaaagtgactaacagaatatacattcagagattaaattgcctaacatagtctacattcagggactattttacaatttatctgcatttag-gact 11649  T
Q  167 aaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    ||| |  |||||||| |||||||||   ||||||||||||||||||    
T  11648 aaaataacgactcatttcctattcagtgactaaagtgactaatctc 11603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 11749 - 11850
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    ||||||||||| ||||||||  || | | ||||||||||||||| ||||||||||| |||||||| | | |||||| ||| |||||  |||||||||||     
T  11749 aaattgactaagagagtcta--tttaaggactattttgcaatttctctgcattcagggactaaagcgactactcatttcccattcagaaactaaagtgat 11846  T
Q  206 taat 209  Q
    ||||    
T  11847 taat 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 27573 - 27670
Alignment:
Q  14 tagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgactaacggagtctgcattcaatgactaaattg 111  Q
    |||||| ||||||||||||||| ||| ||||||||| || |||||||||||||||| | ||||||||||||||| || || |||||  ||||||||||    
T  27573 tagactctgttggtcaatttcaaggactaaagtgacgaacgaagtctacattcaggaagtaaattgactaacggggtatgtattcagggactaaattg 27670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 27592 - 27489
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgac 205  Q
    |||||||| ||||||||||||||| ||  ||| ||||||||||| || | |||||| | |||||||  | |||||| | ||||||| | |||||||||||    
T  27592 aaattgaccaacagagtctacattaagagactgttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggactaaagtgac 27493  T
Q  206 taat 209  Q
    ||||    
T  27492 taat 27489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 27682 - 27755
Alignment:
Q  136 ctattttgcaatttatctgcattcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaat 209  Q
    |||||||||||||||| |||||||| ||||||||||| |||||  | ||||| ||| | ||| |||||||||||    
T  27682 ctattttgcaatttatttgcattcatagactaaagtgacgactactttcctaatcagggacttaagtgactaat 27755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 59808 - 59742
Alignment:
Q  106 aaattgactaacagagtctacattcaggaactattttgcaatttatctgcattcagagactaaagtg 172  Q
    ||||||||||||||||||||||||||||  || ||||||||||| ||||||||||| ||||||||||    
T  59808 aaattgactaacagagtctacattcaggggctgttttgcaatttctctgcattcagggactaaagtg 59742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 59807 - 59855
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattga 112  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  59807 ttcagggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 59783 - 59855
Alignment:
Q  8 tgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattga 80  Q
    ||||| |||||| |||| |||||||||| ||| |||| ||||||| | ||||| |||||||||||||||||||    
T  59783 tgaatgtagactctgttagtcaatttcagggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 72059 - 71906
Alignment:
Q  64 ttcagggactaaattgactaacggagtctgcattcaatgactaaattgacta------acagagtctacattcaggaactattttgcaatttatctgcat 157  Q
    ||||||||||||||||||||||  ||| ||||||||  ||||||||||||||      |     |||| ||||||| |||||||||||||||||||||||    
T  72059 ttcagggactaaattgactaacaaagtttgcattcagggactaaattgactattttgcaatttatctatattcagggactattttgcaatttatctgcat 71960  T
Q  158 tcagagactaaagtggcgactcatctcctattcatgaactaaagtgactaatctc 212  Q
    |||| || ||||||| |||| | | ||||| ||| | |||||||| |||||||||    
T  71959 tcagggattaaagtgacgacccctatcctactca-ggactaaagtcactaatctc 71906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 72090 - 72008
Alignment:
Q  1 cagtccttgaatatagactatgttggtcaatttcatggattaaagtgactaatgaagtctacattcagggactaaattgacta 83  Q
    |||||| ||||| |||| | || |||||||||||| ||| |||| |||||||  |||| | ||||||||||||||||||||||    
T  72090 cagtccctgaatgtagattttgatggtcaatttcagggactaaattgactaacaaagtttgcattcagggactaaattgacta 72008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University