View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4576_high_12 (Length: 236)
Name: NF4576_high_12
Description: NF4576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4576_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 388383 - 388617
Alignment:
| Q |
2 |
catcaccatggtcaccactataaaatcctatttttatatcagcgaaaccatagtcctttgattcgacgaaactaactggaataactgaactccatctaga |
101 |
Q |
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| T |
388383 |
catcaccatggtcaccactataaaatcctatttttatatcagcgaaaccatagtcctctgattcgacgaaactaactggaataactgaactccatctaga |
388482 |
T |
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| Q |
102 |
gaaagctcgtttgaatgcttctcttatctcttgtatgctcaagttatgaatcatgtagtcacttgagaagccataggttagtgtcattggcatgtcgcgt |
201 |
Q |
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| T |
388483 |
gaaagctcgtttgaatgcttctcttatctcttgtatgctcaagttatgaatcatgtagtcacttgagaagccataggttagtgtcattggcatgtcgcgt |
388582 |
T |
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| Q |
202 |
gaccatcgcggttttccaggaaaataaacacaatt |
236 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
388583 |
gaccatcgcggttttccaggaaaataaacaaaatt |
388617 |
T |
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