View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4578-Insertion-5 (Length: 667)

Name: NF4578-Insertion-5
Description: NF4578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4578-Insertion-5
NF4578-Insertion-5
[»] chr3 (42 HSPs)
chr3 (7-117)||(11997344-11997454)
chr3 (18-117)||(35456277-35456376)
chr3 (295-476)||(8070705-8070885)
chr3 (7-117)||(47540852-47540967)
chr3 (295-476)||(3673592-3673774)
chr3 (295-476)||(3693646-3693828)
chr3 (12-74)||(6595773-6595836)
chr3 (284-476)||(8884185-8884379)
chr3 (12-74)||(3034294-3034357)
chr3 (12-74)||(3673237-3673300)
chr3 (12-74)||(3693269-3693332)
chr3 (12-74)||(8070330-8070393)
chr3 (12-74)||(8197103-8197166)
chr3 (12-74)||(8223586-8223649)
chr3 (12-74)||(8888581-8888644)
chr3 (12-74)||(10585570-10585633)
chr3 (20-74)||(16023191-16023246)
chr3 (400-476)||(3034775-3034852)
chr3 (289-476)||(8888936-8889125)
chr3 (12-74)||(29879-29942)
chr3 (12-74)||(14425223-14425286)
chr3 (12-74)||(18350155-18350218)
chr3 (400-462)||(28126318-28126380)
chr3 (12-69)||(51922985-51923043)
chr3 (22-74)||(12899123-12899176)
chr3 (15-74)||(8883824-8883884)
chr3 (22-100)||(49020114-49020194)
chr3 (12-74)||(9706971-9707034)
chr3 (12-74)||(16749300-16749363)
chr3 (12-74)||(19776536-19776599)
chr3 (12-74)||(37438940-37439003)
chr3 (287-341)||(35455907-35455961)
chr3 (7-63)||(18011986-18012043)
chr3 (400-448)||(35455798-35455846)
chr3 (12-74)||(8488771-8488834)
chr3 (12-50)||(429080-429118)
chr3 (7-63)||(19340119-19340176)
chr3 (13-61)||(47540522-47540571)
chr3 (34-74)||(47541315-47541356)
chr3 (12-49)||(53358757-53358794)
chr3 (12-48)||(3166194-3166230)
chr3 (284-320)||(10585234-10585270)
[»] scaffold0008 (2 HSPs)
scaffold0008 (18-112)||(256469-256564)
scaffold0008 (400-466)||(257768-257834)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-117)||(71783-71889)
[»] chr7 (44 HSPs)
chr7 (6-117)||(10532170-10532282)
chr7 (21-117)||(13343766-13343863)
chr7 (400-476)||(9649847-9649923)
chr7 (12-74)||(8954647-8954710)
chr7 (14-74)||(9008810-9008871)
chr7 (6-74)||(27256882-27256951)
chr7 (400-476)||(13343314-13343390)
chr7 (12-74)||(838812-838875)
chr7 (12-74)||(845988-846051)
chr7 (12-74)||(853365-853428)
chr7 (12-74)||(1203992-1204055)
chr7 (12-74)||(1211369-1211432)
chr7 (12-74)||(19096906-19096969)
chr7 (400-462)||(23866854-23866916)
chr7 (15-74)||(1043873-1043933)
chr7 (7-74)||(11297399-11297467)
chr7 (12-74)||(8076701-8076764)
chr7 (12-74)||(9650340-9650403)
chr7 (12-74)||(36477621-36477684)
chr7 (12-74)||(40864743-40864806)
chr7 (400-476)||(13346250-13346326)
chr7 (19-74)||(15566033-15566089)
chr7 (19-74)||(19640957-19641013)
chr7 (12-48)||(29727211-29727247)
chr7 (18-64)||(10499494-10499541)
chr7 (18-64)||(10504523-10504570)
chr7 (7-74)||(11247779-11247845)
chr7 (12-74)||(18426578-18426641)
chr7 (286-373)||(27257232-27257326)
chr7 (12-74)||(45169311-45169374)
chr7 (286-340)||(9009150-9009203)
chr7 (400-476)||(10499014-10499090)
chr7 (400-476)||(10504043-10504119)
chr7 (285-373)||(40864386-40864481)
chr7 (284-355)||(47102548-47102620)
chr7 (7-50)||(2629302-2629345)
chr7 (12-74)||(14259657-14259720)
chr7 (12-74)||(20488599-20488662)
chr7 (400-462)||(10531764-10531826)
chr7 (17-62)||(11017473-11017519)
chr7 (17-74)||(18385144-18385202)
chr7 (289-354)||(1044239-1044304)
chr7 (418-462)||(9010486-9010530)
chr7 (7-43)||(11265748-11265784)
[»] scaffold0182 (2 HSPs)
scaffold0182 (284-476)||(8767-8961)
scaffold0182 (12-74)||(9260-9323)
[»] chr5 (35 HSPs)
chr5 (295-476)||(562494-562674)
chr5 (285-476)||(3666890-3667080)
chr5 (11-74)||(3666563-3666627)
chr5 (295-476)||(557722-557904)
chr5 (400-476)||(42002565-42002642)
chr5 (284-384)||(21323013-21323120)
chr5 (12-74)||(13300870-13300933)
chr5 (12-74)||(21826874-21826937)
chr5 (12-74)||(26869694-26869757)
chr5 (12-74)||(31732188-31732251)
chr5 (295-476)||(36936396-36936578)
chr5 (12-74)||(36936891-36936954)
chr5 (295-476)||(36941150-36941332)
chr5 (12-74)||(36941645-36941708)
chr5 (12-74)||(36949436-36949499)
chr5 (12-74)||(41997315-41997378)
chr5 (12-74)||(42002084-42002147)
chr5 (284-476)||(12044017-12044211)
chr5 (284-373)||(13300473-13300569)
chr5 (12-74)||(21323356-21323419)
chr5 (12-74)||(23976967-23977030)
chr5 (12-65)||(557347-557401)
chr5 (284-476)||(41997657-41997851)
chr5 (12-49)||(8770894-8770931)
chr5 (12-49)||(15395246-15395283)
chr5 (12-74)||(10754101-10754164)
chr5 (12-74)||(12044510-12044573)
chr5 (12-74)||(32460924-32460987)
chr5 (12-74)||(41099181-41099244)
chr5 (12-65)||(562119-562173)
chr5 (284-476)||(32460430-32460624)
chr5 (284-327)||(2451963-2452006)
chr5 (400-466)||(14232597-14232663)
chr5 (51-103)||(15059820-15059872)
chr5 (284-320)||(31732556-31732592)
[»] chr8 (28 HSPs)
chr8 (284-476)||(31448750-31448944)
chr8 (295-476)||(4237227-4237409)
chr8 (295-476)||(4241966-4242148)
chr8 (284-476)||(43301629-43301823)
chr8 (7-74)||(17153184-17153252)
chr8 (12-74)||(4237721-4237784)
chr8 (12-74)||(4242460-4242523)
chr8 (12-74)||(4582676-4582739)
chr8 (12-74)||(8330743-8330806)
chr8 (12-74)||(16066597-16066660)
chr8 (12-74)||(19393111-19393174)
chr8 (12-74)||(22104326-22104389)
chr8 (12-74)||(31449245-31449308)
chr8 (12-71)||(37772358-37772418)
chr8 (12-74)||(14036106-14036169)
chr8 (12-74)||(43302064-43302127)
chr8 (21-74)||(17157432-17157486)
chr8 (284-384)||(8330354-8330461)
chr8 (287-368)||(18945003-18945086)
chr8 (20-111)||(42972775-42972867)
chr8 (285-384)||(25361697-25361803)
chr8 (12-74)||(25367366-25367429)
chr8 (12-74)||(34818086-34818149)
chr8 (12-74)||(21384395-21384458)
chr8 (12-74)||(21387815-21387878)
chr8 (18-74)||(21411680-21411737)
chr8 (18-74)||(21806172-21806229)
chr8 (14-73)||(8169865-8169924)
[»] chr6 (26 HSPs)
chr6 (18-102)||(15991047-15991132)
chr6 (12-112)||(2759718-2759819)
chr6 (12-74)||(27073636-27073699)
chr6 (7-74)||(2862852-2862920)
chr6 (12-71)||(26981246-26981306)
chr6 (12-74)||(16625067-16625130)
chr6 (284-476)||(2759142-2759337)
chr6 (13-74)||(14073787-14073849)
chr6 (285-367)||(28963865-28963951)
chr6 (12-74)||(6112139-6112202)
chr6 (12-74)||(18387583-18387646)
chr6 (12-66)||(24588566-24588621)
chr6 (12-74)||(31477084-31477147)
chr6 (400-476)||(15509414-15509490)
chr6 (20-74)||(14322790-14322845)
chr6 (12-74)||(15704291-15704354)
chr6 (12-74)||(27324441-27324504)
chr6 (294-340)||(2862564-2862610)
chr6 (294-340)||(2881867-2881913)
chr6 (294-328)||(6111771-6111805)
chr6 (18-63)||(9751175-9751221)
chr6 (12-50)||(15645349-15645387)
chr6 (12-49)||(15640961-15640998)
chr6 (294-368)||(15645696-15645772)
chr6 (7-74)||(2882155-2882223)
chr6 (12-74)||(16761033-16761097)
[»] chr2 (26 HSPs)
chr2 (6-74)||(22845047-22845116)
chr2 (15-74)||(25375543-25375603)
chr2 (12-74)||(6856848-6856911)
chr2 (289-476)||(10159604-10159791)
chr2 (284-355)||(17328436-17328507)
chr2 (12-74)||(26897278-26897341)
chr2 (22-108)||(30635457-30635544)
chr2 (12-74)||(34070070-34070133)
chr2 (12-73)||(17327711-17327773)
chr2 (12-74)||(24292842-24292905)
chr2 (12-49)||(7559757-7559794)
chr2 (12-74)||(1284165-1284228)
chr2 (12-74)||(10160100-10160163)
chr2 (12-74)||(24286274-24286337)
chr2 (284-384)||(30659159-30659259)
chr2 (7-74)||(17452966-17453039)
chr2 (294-340)||(30635789-30635835)
chr2 (21-74)||(30641491-30641545)
chr2 (12-65)||(30658828-30658882)
chr2 (400-476)||(30659288-30659365)
chr2 (12-74)||(377670-377733)
chr2 (12-74)||(28855782-28855844)
chr2 (12-74)||(42248878-42248941)
chr2 (20-50)||(3238841-3238871)
chr2 (313-355)||(30637188-30637230)
chr2 (7-74)||(13290943-13291012)
[»] chr4 (34 HSPs)
chr4 (284-373)||(15799127-15799216)
chr4 (400-476)||(13520872-13520948)
chr4 (12-74)||(14898996-14899059)
chr4 (12-74)||(15225816-15225879)
chr4 (12-74)||(26034839-26034902)
chr4 (6-74)||(34561069-34561138)
chr4 (12-74)||(3997442-3997505)
chr4 (12-74)||(7902491-7902554)
chr4 (12-74)||(9185064-9185127)
chr4 (12-74)||(9190929-9190992)
chr4 (12-74)||(14868448-14868511)
chr4 (12-74)||(14877423-14877486)
chr4 (6-74)||(26188048-26188117)
chr4 (284-384)||(3992745-3992852)
chr4 (7-70)||(55073792-55073856)
chr4 (12-74)||(13521365-13521428)
chr4 (400-462)||(55074447-55074508)
chr4 (400-476)||(31297411-31297488)
chr4 (284-373)||(34561418-34561514)
chr4 (296-373)||(26187809-26187888)
chr4 (286-382)||(41817802-41817901)
chr4 (12-74)||(12488449-12488512)
chr4 (7-50)||(32545529-32545572)
chr4 (12-65)||(31297884-31297938)
chr4 (12-73)||(39320213-39320274)
chr4 (7-49)||(52742630-52742672)
chr4 (12-49)||(47575313-47575350)
chr4 (17-71)||(1150742-1150797)
chr4 (12-74)||(8660783-8660846)
chr4 (12-74)||(10713591-10713654)
chr4 (12-74)||(10927361-10927424)
chr4 (12-74)||(15011196-15011259)
chr4 (284-320)||(7902155-7902191)
chr4 (412-476)||(39320701-39320765)
[»] chr1 (30 HSPs)
chr1 (11-74)||(14804154-14804218)
chr1 (12-74)||(13893967-13894030)
chr1 (12-74)||(14819623-14819686)
chr1 (12-74)||(17213824-17213887)
chr1 (12-74)||(22428576-22428639)
chr1 (12-74)||(40232768-40232831)
chr1 (12-74)||(41097338-41097401)
chr1 (13-74)||(52100602-52100664)
chr1 (400-476)||(3095220-3095297)
chr1 (12-74)||(1067132-1067195)
chr1 (12-74)||(3094740-3094803)
chr1 (12-74)||(21498302-21498365)
chr1 (20-74)||(23285219-23285274)
chr1 (400-480)||(17213028-17213108)
chr1 (7-74)||(27308268-27308336)
chr1 (12-74)||(2367694-2367757)
chr1 (400-443)||(14204485-14204528)
chr1 (12-74)||(26199009-26199072)
chr1 (12-74)||(39243403-39243466)
chr1 (12-74)||(39246958-39247021)
chr1 (12-74)||(41387355-41387418)
chr1 (15-74)||(8267232-8267292)
chr1 (12-74)||(19725286-19725347)
chr1 (12-74)||(2384626-2384689)
chr1 (12-43)||(16836698-16836729)
chr1 (20-73)||(16633468-16633522)
chr1 (284-384)||(40232364-40232472)
chr1 (233-286)||(17213580-17213635)
chr1 (12-48)||(33055687-33055723)
chr1 (284-320)||(41097002-41097038)
[»] scaffold0132 (1 HSPs)
scaffold0132 (12-74)||(24676-24739)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-74)||(30335-30398)
[»] scaffold1910 (1 HSPs)
scaffold1910 (12-74)||(517-580)
[»] scaffold0357 (1 HSPs)
scaffold0357 (12-74)||(3727-3790)
[»] scaffold0327 (1 HSPs)
scaffold0327 (12-74)||(19602-19665)
[»] scaffold0205 (1 HSPs)
scaffold0205 (12-74)||(30918-30981)
[»] scaffold0070 (4 HSPs)
scaffold0070 (12-74)||(59077-59140)
scaffold0070 (284-387)||(59419-59529)
scaffold0070 (284-387)||(63621-63731)
scaffold0070 (17-74)||(63284-63342)
[»] scaffold0060 (3 HSPs)
scaffold0060 (12-74)||(47353-47416)
scaffold0060 (12-74)||(52297-52360)
scaffold0060 (285-373)||(51899-51994)
[»] scaffold0045 (2 HSPs)
scaffold0045 (400-451)||(84040-84091)
scaffold0045 (296-328)||(83929-83961)
[»] scaffold0015 (1 HSPs)
scaffold0015 (12-74)||(193647-193710)
[»] scaffold0044 (2 HSPs)
scaffold0044 (12-76)||(64811-64876)
scaffold0044 (12-76)||(81209-81274)
[»] scaffold0628 (2 HSPs)
scaffold0628 (400-476)||(5798-5874)
scaffold0628 (286-355)||(7449-7519)
[»] scaffold0041 (2 HSPs)
scaffold0041 (284-384)||(34697-34804)
scaffold0041 (12-74)||(35084-35147)
[»] scaffold0932 (1 HSPs)
scaffold0932 (7-73)||(1020-1087)
[»] scaffold0061 (2 HSPs)
scaffold0061 (12-74)||(49364-49427)
scaffold0061 (284-320)||(49007-49043)
[»] scaffold0017 (2 HSPs)
scaffold0017 (12-74)||(149207-149270)
scaffold0017 (284-320)||(149591-149627)
[»] scaffold0478 (1 HSPs)
scaffold0478 (21-74)||(8247-8301)
[»] scaffold0572 (1 HSPs)
scaffold0572 (12-74)||(10356-10419)
[»] scaffold0229 (1 HSPs)
scaffold0229 (12-74)||(10806-10869)
[»] scaffold0157 (1 HSPs)
scaffold0157 (12-74)||(31965-32028)
[»] scaffold0144 (1 HSPs)
scaffold0144 (12-74)||(7528-7591)
[»] scaffold0141 (1 HSPs)
scaffold0141 (12-74)||(13392-13455)
[»] scaffold0124 (1 HSPs)
scaffold0124 (12-74)||(21366-21429)
[»] scaffold0034 (1 HSPs)
scaffold0034 (12-74)||(121217-121280)
[»] scaffold0004 (1 HSPs)
scaffold0004 (12-74)||(199841-199904)
[»] scaffold0720 (1 HSPs)
scaffold0720 (21-74)||(5931-5985)
[»] scaffold0452 (1 HSPs)
scaffold0452 (12-74)||(12348-12411)
[»] scaffold0431 (1 HSPs)
scaffold0431 (12-74)||(14857-14920)
[»] scaffold0020 (2 HSPs)
scaffold0020 (284-327)||(298-341)
scaffold0020 (12-74)||(620-683)
[»] scaffold0484 (1 HSPs)
scaffold0484 (284-328)||(7926-7970)


Alignment Details
Target: chr3 (Bit Score: 107; Significance: 3e-53; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 11997454 - 11997344
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatattgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgtt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11997454 actacgtgagctctctatttatagagaaaattcacaactaatattgagaaactttgggaacaagtaatactttattttgagattaattaattcacatgtt 11997355  T
Q  107 agatcttgtac 117  Q
    |||||||||||    
T  11997354 agatcttgtac 11997344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 35456376 - 35456277
Alignment:
Q  18 tctctatttatagagaaaattcacaactaatattgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttagatcttgtac 117  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  35456376 tctctatttatagagaaaattcacaactaataaggagaaactttgggaacaagtaatacattactttgagattaagtaattcacatattagatcttgtac 35456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 295 - 476
Target Start/End: Original strand, 8070705 - 8070885
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgttccattcggtgtgggatttatacn 392  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||||||| || ||||||| ||   |     
T  8070705 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgttccatccgatgtgggactt---cc 8070800  T
Q  393 nnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
           |||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  8070801 attttttcaattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaatttccacacatgttcca 8070885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 47540967 - 47540852
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat----actttattttgagattaagtaattcac 101  Q
    |||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    |  ||| ||||||| ||||||||| ||    
T  47540967 actatgtgaactttctatttatagagaaaattcacaactaatatgtgagaaactttgggaacaagtaattaaaatattactttgagactaagtaatttac 47540868  T
Q  102 atgttagatcttgtac 117  Q
    || |||||||| ||||    
T  47540867 atattagatctagtac 47540852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 476
Target Start/End: Original strand, 3673592 - 3673774
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||||||| ||  |    
T  3673592 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca 3673690  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |        |||||||||||||||||||||||||||||||   |||||||||| ||||| || ||||||||||||||  ||||||||    
T  3673691 cttttt---caattcacacaacactagttctacccaacatgggaatttgtgtttagtctgtttaactcaatttccacacatgttcca 3673774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 476
Target Start/End: Original strand, 3693646 - 3693828
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||||||| ||  |    
T  3693646 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca 3693744  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |        |||||||||||||| |||||||||||||||| | |||||||||| ||||| || ||||||||||||||  ||||||||    
T  3693745 cttttt---caattcacacaacattagttctacccaacatgagaatttgtgtttagtctgtttaactcaatttccacacatgttcca 3693828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 6595836 - 6595773
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  6595836 gtgagctctctatttatagagaaaattcacaactaataagtgaaaaactttgggaacaagtaat 6595773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 476
Target Start/End: Original strand, 8884185 - 8884379
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtg 379  Q
    ||||||||| ||||||||||||||||| | ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||    
T  8884185 attttttctctagtgcttacttcgttctcataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatg 8884283  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||||| ||   |        |||||||||||||||||||||||||||||||   |||||||||| |||| ||| |||||| |||||||  ||||||||    
T  8884284 tgggacttc--catttttttcaattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcagtttccacacatgttcca 8884379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3034294 - 3034357
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  3034294 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 3034357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3673237 - 3673300
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  3673237 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 3673300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3693269 - 3693332
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  3693269 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 3693332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8070330 - 8070393
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  8070330 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 8070393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8197103 - 8197166
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  8197103 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 8197166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8223586 - 8223649
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  8223586 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 8223649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8888581 - 8888644
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  8888581 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 8888644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 10585633 - 10585570
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  10585633 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 10585570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 16023191 - 16023246
Alignment:
Q  20 tctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16023191 tctatttatagagaaaattcacaactaatatgtgacaaactttgggaacaagtaat 16023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 3034775 - 3034852
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||||||||   |||||||||| ||||| || ||||||||||||||  ||||||||    
T  3034775 caattcacacaacactagttctacccaacatgggaatttgtgtttagtctgtttaactcaatttccacacatgttcca 3034852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 476
Target Start/End: Original strand, 8888936 - 8889125
Alignment:
Q  289 ttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataa--actactaa--tgtgtgttccattcggtgtggga 384  Q
    |||| ||||||||||||||||||| ||| |||| | || ||||||||||||| ||||| ||||||  ||||||||  |||||||||||| || |||||||    
T  8888936 ttctctagtgcttacttcgttcacataactatgta-cctcttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtggga 8889034  T
Q  385 tttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
     ||  ||        ||||||||||||||||| |||||||||||||   |||||||||| |||| ||| |||||| |||||||  ||||||||    
T  8889035 cttccac--ttttttcaattcacacaacactaattctacccaacatgggaatttgtgtttagtctttttaactcagtttccacacatgttcca 8889125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 29879 - 29942
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||    
T  29879 gtgagccctctatttatagaaaaatttcacaactaataggtgagaaactttgggaacaagtaat 29942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 14425286 - 14425223
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||| |||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  14425286 gtgagctctctatttctagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 14425223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 18350218 - 18350155
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||    
T  18350218 gtgagccctctatttatagagaaacttcgcaactaataggtgagaaactttgggaacaagtaat 18350155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 462
Target Start/End: Original strand, 28126318 - 28126380
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaattt 462  Q
    |||||||||||||| | |||||||||||||||||| |||||||| | ||||| ||||||||||    
T  28126318 caattcacacaacattggttctacccaacataaaattttgtgtttaatcttttaactcaattt 28126380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 51922985 - 51923043
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaa 69  Q
    |||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  51922985 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaa 51923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 12899176 - 12899123
Alignment:
Q  22 tatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  12899176 tatttatagagaaaattcacagctaataagtgagaaactttgggaacaagtaat 12899123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 8883824 - 8883884
Alignment:
Q  15 agctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||| |||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  8883824 agctctttatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 8883884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 49020114 - 49020194
Alignment:
Q  22 tatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaatacttta-ttttgagattaagtaattca 100  Q
    ||||||||||||||||||||||||||| | ||| ||| |||||||||||||||||| |||  || | ||||||||||||||    
T  49020114 tatttatagagaaaattcacaactaataagtgataaattttgggaacaagtaatacattacgttggggattaagtaattca 49020194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9707034 - 9706971
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  9707034 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 9706971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 16749363 - 16749300
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  16749363 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 16749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 19776536 - 19776599
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  19776536 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 19776599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 37439003 - 37438940
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  37439003 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 37438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 35455961 - 35455907
Alignment:
Q  287 ttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacact 341  Q
    |||||||||||||||||||| ||||| |||||||||||||  ||| |||||||||    
T  35455961 ttttctgtagtgcttacttcattcacataattatgcacccatttacaggtacact 35455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 18011986 - 18012043
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgg 63  Q
    |||| ||||||| | ||||||||||||||||||||||||||||| ||| |||||||||    
T  18011986 actatgtgagctatttatttatagagaaaattcacaactaatatgtgataaactttgg 18012043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 35455846 - 35455798
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtc 448  Q
    ||||| ||||||||||||||||||||||||||  |||||||||| ||||    
T  35455846 caatttacacaacactagttctacccaacatatgaatttgtgtttagtc 35455798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 8488834 - 8488771
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  8488834 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 8488771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 429080 - 429118
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat 50  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  429080 gtgagctctttatttatagagaaaattcacaagtaatat 429118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19340119 - 19340176
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgg 63  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||| | |||||||||||    
T  19340119 actatgtgagctatctatttataaagaaaattcacaaataatatgttagaaactttgg 19340176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 47540571 - 47540522
Alignment:
Q  13 tgagctctctatttatagagaaaattcacaactaatat-tgagaaacttt 61  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||||||||    
T  47540571 tgagccctttatttttagagaaaattcacaactaatatgtgagaaacttt 47540522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 47541356 - 47541315
Alignment:
Q  34 aaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  47541356 aaattcacaactaatatgtgaaaaactttgggaacaagtaat 47541315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 53358757 - 53358794
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata 49  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  53358757 gtgagctctctatttataaagaaagttcacaactaata 53358794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 3166230 - 3166194
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat 48  Q
    |||||||||||||||||||| |||||||| |||||||    
T  3166230 gtgagctctctatttatagaaaaaattcataactaat 3166194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 10585270 - 10585234
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattat 320  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  10585270 attttttctctagtgcttacttcgttcacataattat 10585234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 256469 - 256564
Alignment:
Q  18 tctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttagatct 112  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||    
T  256469 tctctatttatagagaatattcacaactaataagtgagaaactttgggaacaagtaatacattactttgagattaggtaattcacatattagatct 256564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 257768 - 257834
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccac 466  Q
    |||||||||||||| ||||||||| |||||||| |||||||||| ||||||| ||||||||||||||    
T  257768 caattcacacaacattagttctactcaacataagaatttgtgtttagtcttttaactcaatttccac 257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 71783 - 71889
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttagat 110  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||| | ||||||||||| |||| |||| |    
T  71783 gtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaatacattactttaacattaagtaatttacatattagct 71882  T
Q  111 cttgtac 117  Q
    || ||||    
T  71883 ctagtac 71889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 8e-26; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 10532282 - 10532170
Alignment:
Q  6 cactacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatg 104  Q
    ||||||||||  |||||| |||||||||||||||||||||||||  ||||||||||||||||||  |||||| ||| |||| |||||||||||||||||     
T  10532282 cactacgtgaattctctacttatagagaaaattcacaactaataagtgagaaactttgggaacacttaatacattactttgggattaagtaattcacata 10532183  T
Q  105 ttagatcttgtac 117  Q
    |||||||| ||||    
T  10532182 ttagatctagtac 10532170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 13343863 - 13343766
Alignment:
Q  21 ctatttatagagaaaattcacaactaatatt-gagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttagatcttgtac 117  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||| |||| || |||||||||||||| |||||||| ||||    
T  13343863 ctatttatagagaaaattcacaactaataagagagaaactttgggaacaattaatacattactttgggaataagtaattcacatattagatctagtac 13343766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 9649923 - 9649847
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||||||||   |||||||||| ||||||| ||||||||||||||  ||||||||    
T  9649923 caattcacacaacactagttctacccaacatgggaatttgtgtttagtcttttaactcaatttccacacatgttcca 9649847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 8954710 - 8954647
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  8954710 gtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaagtaat 8954647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 9008810 - 9008871
Alignment:
Q  14 gagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  9008810 gagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaaataat 9008871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 27256882 - 27256951
Alignment:
Q  6 cactacgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  27256882 cactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 27256951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 13343390 - 13343314
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    ||||||||||||||||||||||||||||| | ||||||||||||  |||||| || |||||||||||  ||||||||    
T  13343390 caattcacacaacactagttctacccaacgtgaaaatttgtgttttgtcttttaattcaatttccacacatgttcca 13343314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 838875 - 838812
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||    
T  838875 gtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttgggaacaagtaat 838812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 846051 - 845988
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  846051 gtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 845988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 853428 - 853365
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  853428 gtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 853365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 1204055 - 1203992
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||    
T  1204055 gtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttgggaacaagtaat 1203992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 1211432 - 1211369
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  1211432 gtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 1211369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 19096906 - 19096969
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||||    
T  19096906 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgcgaacaagtaat 19096969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 462
Target Start/End: Original strand, 23866854 - 23866916
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaattt 462  Q
    |||||||||||||||||||||||||||||||   |||||||||| ||||||| ||||||||||    
T  23866854 caattcacacaacactagttctacccaacatgggaatttgtgtttagtcttttaactcaattt 23866916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 1043873 - 1043933
Alignment:
Q  15 agctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  1043873 agctctttatttatagagaaaattcacaattaatatgtgagaaactttggaaacaagtaat 1043933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 11297399 - 11297467
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||| ||  |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  11297399 actacgtgatctacctatttatagagaaaaatcacaactaatatgtgagaaactttgtgaacaagtaat 11297467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8076701 - 8076764
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||| ||||| | ||||||||||||||| ||||||||    
T  8076701 gtgagctctctatttatagagaaagttcacatctaataagtgagaaactttgggagcaagtaat 8076764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9650403 - 9650340
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||||||||||| ||||||||    
T  9650403 gtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 9650340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 36477621 - 36477684
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||| ||||    
T  36477621 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttggggacaaataat 36477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 40864806 - 40864743
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | |||| |||||||||| ||||||||    
T  40864806 gtgagctctctatttatagagaaagttcacaactaataagtgagtaactttgggagcaagtaat 40864743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 13346326 - 13346250
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    ||||||||||||||||||||||||| ||| | ||||||| ||||  |||||| || |||||||||||  ||||||||    
T  13346326 caattcacacaacactagttctaccaaacgtgaaaatttatgttttgtcttttaattcaatttccacacatgttcca 13346250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 15566033 - 15566089
Alignment:
Q  19 ctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||    
T  15566033 ctctatttatatagaaaactcacaactaatatgtgagaaacttttggaacaagtaat 15566089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 19640957 - 19641013
Alignment:
Q  19 ctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  19640957 ctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 19641013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 29727247 - 29727211
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  29727247 gtgagctctctatttatagagaaaattcacaactaat 29727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 10499541 - 10499494
Alignment:
Q  18 tctctatttatagagaaaattcacaactaat-attgagaaactttggg 64  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  10499541 tctctatttatagagaaaattcacaactaataagtgagaaactttggg 10499494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 10504570 - 10504523
Alignment:
Q  18 tctctatttatagagaaaattcacaactaat-attgagaaactttggg 64  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  10504570 tctctatttatagagaaaattcacaactaataagtgagaaactttggg 10504523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 11247845 - 11247779
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatattgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||| |||||||||||||||||||||| ||| | || |||||||||||||||| ||||    
T  11247845 actatgtgagctctatatttatagagaaaattcacaattaaca-tgtgaaactttgggaacaaataat 11247779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 18426578 - 18426641
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  18426578 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 18426641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 27257232 - 27257326
Alignment:
Q  286 tttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccat 373  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||     |||||| ||||| ||||| ||||||  |||||||||||||| |||||    
T  27257232 tttttctctagtgcttacttcgttcacataattatgtacccccattaattagagatacacccccactatataaacactactaatgtgtgatccat 27257326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 45169374 - 45169311
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  45169374 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 45169311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 9009150 - 9009203
Alignment:
Q  286 tttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacac 340  Q
    ||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||    
T  9009150 tttttctctagtgcttactttgttcacataattatgca-ccccttagaggtacac 9009203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 10499090 - 10499014
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||  || |  |||||| |||| ||||||| || |||||||||||  ||||||||    
T  10499090 caattcacacaacactagttctaccttacgttgaaatttatgtttagtcttttaattcaatttccacacatgttcca 10499014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 10504119 - 10504043
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||  || |  |||||| |||| ||||||| || |||||||||||  ||||||||    
T  10504119 caattcacacaacactagttctaccttacgttgaaatttatgtttagtcttttaattcaatttccacacatgttcca 10504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 40864481 - 40864386
Alignment:
Q  285 ttttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccat 373  Q
    |||||| | ||||||||||||||||||| |||||||| ||||||     ||||||||||||  |||| ||||||  |||||||||||||| |||||    
T  40864481 ttttttttctagtgcttacttcgttcacataattatgtacccccattaattagaggtacacctccactatataaacactactaatgtgtgatccat 40864386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 355
Target Start/End: Original strand, 47102548 - 47102620
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccc-cttagaggtacactcccacaatataaac 355  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||  |||||||||||| ||||  ||||||||    
T  47102548 attttttctcttgtgcttacttcgttcacataattatgtacccctattagaggtacacccccaatatataaac 47102620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 2629302 - 2629345
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat 50  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||    
T  2629302 actatgtgagctctatatttatagagaaaatttacaactaatat 2629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 14259657 - 14259720
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  14259657 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 14259720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 20488599 - 20488662
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  20488599 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 20488662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 10531826 - 10531764
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaattt 462  Q
    |||||| ||||| ||||||||||||| || | |||||||||||| ||||||| || |||||||    
T  10531826 caattcgcacaaaactagttctaccctacgtgaaaatttgtgtttagtcttttaattcaattt 10531764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 11017519 - 11017473
Alignment:
Q  17 ctctctatttatagagaaaattcacaactaat-attgagaaactttg 62  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11017519 ctctctatttatatagaaaattcacaactaataagtgagaaactttg 11017473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18385144 - 18385202
Alignment:
Q  17 ctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||| ||||||| | |||  ||||||||||| ||||||||||||    
T  18385144 ctctctatttatagagaaagttcacaattgatacgtgagaaacttttggaacaagtaat 18385202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 1044239 - 1044304
Alignment:
Q  289 ttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaa 354  Q
    |||| ||||||||||||||||||| |||||| | |||| ||||||| ||||| ||||  |||||||    
T  1044239 ttctctagtgcttacttcgttcacataattacgtaccctcttagagctacacccccattatataaa 1044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 9010486 - 9010530
Alignment:
Q  418 ttctacccaacataaaaatttgtgttcagtctttgaactcaattt 462  Q
    ||||||||||||||||||||| |||| || |||| ||||||||||    
T  9010486 ttctacccaacataaaaatttatgtttagacttttaactcaattt 9010530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 11265748 - 11265784
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaa 43  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  11265748 actatgtgagctctatatttatagagaaaattcacaa 11265784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 476
Target Start/End: Complemental strand, 8961 - 8767
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtg 379  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||    
T  8961 attttttctctagtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatg 8863  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||||||||  ||        |||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  8862 tgggatttccactttttt--caattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaatttccacacatgttcca 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9323 - 9260
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||| ||| ||||||||    
T  9323 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttaggagcaagtaat 9260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 476
Target Start/End: Original strand, 562494 - 562674
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgttccattcggtgtgggatttatacn 392  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||||||| || ||||||| ||  ||     
T  562494 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgttccatccgatgtgggacttccact 562592  T
Q  393 nnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
           |||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  562593 tttt---caattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaatttccacacatgttcca 562674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 476
Target Start/End: Original strand, 3666890 - 3667080
Alignment:
Q  285 ttttttctgtagtgcttacttcgttcacttaattatgcaccccc-ttagaggtacactcccacaatataaactactaatgtgtgttccattcggtgtggg 383  Q
    ||||| || |||||||||| |||||||| |||||||| |||||  |||||||||||| ||||| ||| | ||||||||||  |||||||| || ||||||    
T  3666890 tttttcctctagtgcttacatcgttcacataattatgtacccctattagaggtacacccccactataaacactactaatgcttgttccatccgatgtggg 3666989  T
Q  384 atttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    | ||  ||        ||||| ||||||||||| |||||| |||||| |||||||||||| |||||||  |||||||||||||  ||||||||    
T  3666990 acttccaccttttt--caatttacacaacactatttctacacaacatgaaaatttgtgtttagtctttttactcaatttccacacatgttcca 3667080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 3666563 - 3666627
Alignment:
Q  11 cgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  3666563 cgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgagaacaagtaat 3666627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 476
Target Start/End: Original strand, 557722 - 557904
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||||||| ||  |    
T  557722 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca 557820  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    |        |||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  557821 cttttt---caattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaatttccacacatgttcca 557904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 42002565 - 42002642
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||||||||||||||||||||||||||||||||  |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  42002565 caattcacacaacactagttctacccaacatatgaatttgtgtttagtctttttaactcaatttccacacatgttcca 42002642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 21323120 - 21323013
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccattcg 376  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||     |||||||||||| ||||| ||||||  |||||||||||||| ||||| ||    
T  21323120 attttttctctagtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactactaatgtgtgatccatccg 21323021  T
Q  377 gtgtggga 384  Q
     |||||||    
T  21323020 atgtggga 21323013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 13300933 - 13300870
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  13300933 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 13300870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 21826874 - 21826937
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  21826874 gtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 21826937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 26869757 - 26869694
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  26869757 gtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 26869694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 31732188 - 31732251
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  31732188 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 31732251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 476
Target Start/End: Complemental strand, 36936578 - 36936396
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| || || ||||||||  |||||||||||||  |||||||| |||| || ||  |    
T  36936578 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccctactatataaacactactaatgtgtgtgttccattcgatgtgagacttcca 36936480  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |        |||||||||||||||||||||||||||||||   |||||||||| ||||| || ||||||||||||||  ||||||||    
T  36936479 ctgttt---caattcacacaacactagttctacccaacatgggaatttgtgtttagtctgtttaactcaatttccacacatgttcca 36936396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 36936954 - 36936891
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  36936954 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 36936891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 476
Target Start/End: Complemental strand, 36941332 - 36941150
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||||||| ||  |    
T  36941332 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca 36941234  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |        ||||||||| |||||||||||||||||||||   |||||||||| ||||| || ||||||||||||||  ||||||||    
T  36941233 cttttt---caattcacagaacactagttctacccaacatgggaatttgtgtttagtctgtttaactcaatttccacacatgttcca 36941150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 36941708 - 36941645
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  36941708 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 36941645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 36949436 - 36949499
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  36949436 gtgagctctctatttatagaaaaaattcataactaataagtgagaaactttgggaacaagtaat 36949499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 41997315 - 41997378
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  41997315 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 41997378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 42002084 - 42002147
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  42002084 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 42002147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 476
Target Start/End: Complemental strand, 12044211 - 12044017
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtg 379  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||| | ||| || ||||| ||||| ||||||||  |||||||||||||  ||||| || ||    
T  12044211 attttttctctagtgcttacttcgttcacataactatgtacctc-ttaaagatacacccccactatataaacactactaatgtgtgtgttccatccgatg 12044113  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
     |||| ||  ||        |||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  12044112 agggactttcactttttt--caattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaatttccacacatgttcca 12044017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 13300569 - 13300473
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccat 373  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||     |||||||||||| ||||| ||||||  |||||||||||||| |||||    
T  13300569 attttttctctagtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactactaatgtgtgatccat 13300473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 21323419 - 21323356
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||| | ||||||||    
T  21323419 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggaagcaagtaat 21323356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 23977030 - 23976967
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| ||||| |||||| | ||||||||||||||| ||||||||    
T  23977030 gtgagctctctatttatagagaaagttcactactaataagtgagaaactttgggagcaagtaat 23976967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 557347 - 557401
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttggga 65  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  557347 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 557401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 476
Target Start/End: Original strand, 41997657 - 41997851
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtg 379  Q
    ||||||||| || |||||||||||||||| ||| |||| ||| ||| ||| |||||| ||||  ||||||||  |||||||||||||  ||||| || ||    
T  41997657 attttttctctaatgcttacttcgttcacataactatgtacctcct-agaagtacacccccaatatataaacactactaatgtgtgtgttccatccgatg 41997755  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||||| ||  ||        |||||||||||||||||||||||||||||||   |||||||||| |||| ||| |||||||||| |||  ||||||||    
T  41997756 tgggacttccactttttt--caattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaattttcacacatgttcca 41997851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 8770894 - 8770931
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8770894 gtgagctctctatttatagagaaaattcacaactaata 8770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 15395283 - 15395246
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15395283 gtgagctctctatttatagagaaaattcacaactaata 15395246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 10754101 - 10754164
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  10754101 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 10754164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 12044573 - 12044510
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||| ||||||||||| ||||||||    
T  12044573 gtgagctctctttttctagagaaaattcacaactaataagtgaaaaactttgggagcaagtaat 12044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 32460987 - 32460924
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||||||| ||| ||||||||    
T  32460987 gtgagctctctatttatagataaagttcacaactaataagtgagaaactttaggagcaagtaat 32460924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 41099181 - 41099244
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| ||| |||||||||  ||| ||||||||||||||||||||    
T  41099181 gtgagccctctatttatagagaaacttcccaactaataggtgataaactttgggaacaagtaat 41099244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 562119 - 562173
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttggga 65  Q
    |||||||||||||||||||||||| |||||||||||| | | |||||||||||||    
T  562119 gtgagctctctatttatagagaaagttcacaactaataagtaagaaactttggga 562173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 476
Target Start/End: Complemental strand, 32460624 - 32460430
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtg 379  Q
    ||||||||| |||| |||||||| ||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||    
T  32460624 attttttctctagtacttacttcattcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatg 32460526  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||| | ||  ||        |||||||||||||||||||||||||||||||   |||||||| | |||| ||| ||||||||||| ||  ||||||||    
T  32460525 tggtacttccactttttt--caattcacacaacactagttctacccaacatgggaatttgtgattagtctttttaactcaatttcaacacatgttcca 32460430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 327
Target Start/End: Original strand, 2451963 - 2452006
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccc 327  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||    
T  2451963 attttttctctagtgcttacttcgttcacataattatgtacccc 2452006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 14232663 - 14232597
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccac 466  Q
    |||||||||||| |||||| ||||||||  |  ||||||||||| ||| ||| ||||||||||||||    
T  14232663 caattcacacaatactagtgctacccaatgtggaaatttgtgtttagttttttaactcaatttccac 14232597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 15059820 - 15059872
Alignment:
Q  51 tgagaaactttgggaacaagtaatactttattttgagattaagtaattcacat 103  Q
    ||||||||||| | |||||||||||| ||| ||||| |||| |||||||||||    
T  15059820 tgagaaactttagaaacaagtaatacattactttgacattaggtaattcacat 15059872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 31732556 - 31732592
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattat 320  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  31732556 attttttctctagtgcttacttcgttcacataattat 31732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 284 - 476
Target Start/End: Complemental strand, 31448944 - 31448750
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtg 379  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||    
T  31448944 attttttctatagtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatg 31448846  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||||| ||  ||        |||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  31448845 tgggacttccactttttt--caattcacacaacactagttctacccaacatgggaatttgtgtttagtctttttaactcaatttccacacatgttcca 31448750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 476
Target Start/End: Complemental strand, 4237409 - 4237227
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||||||| ||  |    
T  4237409 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca 4237311  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |        |||||||||||||||||||||||||||||||   |||||||||| ||||| || ||||||||||||||  ||||||||    
T  4237310 cttttt---caattcacacaacactagttctacccaacatgggaatttgtgtttagtctgtttaactcaatttccacacatgttcca 4237227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 476
Target Start/End: Complemental strand, 4242148 - 4241966
Alignment:
Q  295 agtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgt--tccattcggtgtgggatttata 390  Q
    |||||||||||||||||| ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||||||  ||||| || ||||||| ||  |    
T  4242148 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca 4242050  T
Q  391 cnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |        |||||||||||||||||||||||||||||||   |||||||||| ||||| || ||||||||||||||  ||||||||    
T  4242049 cttttt---caattcacacaacactagttctacccaacatgggaatttgtgtttagtctgtttaactcaatttccacacatgttcca 4241966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 476
Target Start/End: Complemental strand, 43301823 - 43301629
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgt--gtgttccattcggtg 379  Q
    ||||||||| ||||||||||||||||||  ||| |||| ||| | |||||||||||| ||||| ||||||||  |||||||||  ||||||||| || ||    
T  43301823 attttttctctagtgcttacttcgttcagataactatgtacctc-ttagaggtacacccccactatataaacactactaatgtatgtgttccatccgatg 43301725  T
Q  380 tgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    | ||| ||  ||        |||||||||||||||||||||||||||| ||  ||||||||||| |||| ||| |||||||||||||| ||| |||||    
T  43301724 taggacttccactttttt--caattcacacaacactagttctacccaagatggaaatttgtgtttagtctttttaactcaatttccacaaatcttcca 43301629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 17153184 - 17153252
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||| ||  |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  17153184 actacgtgatctacctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacaagtaat 17153252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 4237784 - 4237721
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  4237784 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 4237721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 4242523 - 4242460
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  4242523 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 4242460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 4582739 - 4582676
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  4582739 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 4582676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 8330806 - 8330743
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  8330806 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 8330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 16066660 - 16066597
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||    
T  16066660 gtgagctctctatttatagagaaacttcacaactaataggtgagaaactttggggacaagtaat 16066597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19393174 - 19393111
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  19393174 gtgagatctctatttatagagaaatttcacaactaataagtgagaaactttgggaacaagtaat 19393111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 22104326 - 22104389
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  22104326 gtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 22104389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 31449308 - 31449245
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  31449308 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 31449245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 37772358 - 37772418
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagt 71  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||    
T  37772358 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 37772418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 14036106 - 14036169
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||| ||||||||| | |||||| ||||||||||||||||| ||||||    
T  14036106 gtgagctctctatttatagaaaaaattcacgattaatatgtgagaaactttgggaacgagtaat 14036169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 43302127 - 43302064
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| ||||||| |||| | ||||||||||||||| ||||||||    
T  43302127 gtgagctctctatttatagagaaagttcacaagtaataagtgagaaactttgggagcaagtaat 43302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 17157486 - 17157432
Alignment:
Q  21 ctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  17157486 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacacgtaat 17157432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 8330461 - 8330354
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataaac--tactaatgtgtgttccattcg 376  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||     |||||||||||| || || ||||||||  |||||||||||| ||||| ||    
T  8330461 attttttctctagtgcttatttcgttcacataattatgtacccccgttaattagaggtacacccctactatataaacactactaatgtgtgatccatccg 8330362  T
Q  377 gtgtggga 384  Q
     |||||||    
T  8330361 atgtggga 8330354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 18945086 - 18945003
Alignment:
Q  287 ttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataa--actactaatgtgtgt 368  Q
    |||||| |||| |||||||| |||||||||||||||||||| ||||||||| || || |  ||||||  |||||||||||||||    
T  18945086 ttttctatagtccttacttcattcacttaattatgcacccctttagaggtataccccaattatataaacactactaatgtgtgt 18945003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 42972775 - 42972867
Alignment:
Q  20 tctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttagatc 111  Q
    |||||||||||||||||||  | ||||| |  |||||||||||||||| ||| ||||| ||| ||||  |||||||||||||||| |||||||    
T  42972775 tctatttatagagaaaatttcccactaaaaagtgagaaactttgggaataagaaatacattactttgtcattaagtaattcacatattagatc 42972867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 25361803 - 25361697
Alignment:
Q  285 ttttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccattcgg 377  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||     ||| |||||||  ||||| ||||||  |||||||||||||| ||||| ||     
T  25361803 ttttttctctagtgcttacttcgttcacataattatgtacccccagtaattaaaggtacatccccactatataaatactactaatgtgtgatccatccga 25361704  T
Q  378 tgtggga 384  Q
    |||||||    
T  25361703 tgtggga 25361697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 25367429 - 25367366
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||||||||||||| |||||||||| | | ||||||||||||||| ||||||||    
T  25367429 gtgaactctctatttatagagaaagttcacaactagtaagtgagaaactttgggatcaagtaat 25367366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 34818149 - 34818086
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||||||||| ||| ||||||||    
T  34818149 gtgaactctctatttatagagaaagttcacaactaataactgagaaactttcggagcaagtaat 34818086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 21384395 - 21384458
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  21384395 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21384458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 21387815 - 21387878
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  21387815 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21387878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 21411680 - 21411737
Alignment:
Q  18 tctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  21411680 tctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21411737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 21806172 - 21806229
Alignment:
Q  18 tctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  21806172 tctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21806229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 8169865 - 8169924
Alignment:
Q  14 gagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaa 73  Q
    |||||||||||||| ||||| |||||||||||||| | ||||||| |||||| ||||||||    
T  8169865 gagctctctatttaaagagagaattcacaactaatctatgagaaa-tttggggacaagtaa 8169924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 15991132 - 15991047
Alignment:
Q  18 tctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaatactttattttgagattaagtaattcaca 102  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||||  |||||||||||||||    
T  15991132 tctctatttgtagagaaaattcacaactaataagtgagaaactttggaaacaagtaatacattattttggtattaagtaattcaca 15991047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 2759819 - 2759718
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttagat 110  Q
    ||||||||||| |||| |||||||||||||||||||||  | |||||||||  ||||||||||||| ||| ||||  |||||||||||||||| ||||||    
T  2759819 gtgagctctctgtttacagagaaaattcacaactaataagtaagaaactttttgaacaagtaatacattactttggcattaagtaattcacatattagat 2759720  T
Q  111 ct 112  Q
    ||    
T  2759719 ct 2759718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 27073636 - 27073699
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  27073636 gtgagctctctatttataaagaaatttcacaactaataggtgagaaactttgggaacaagtaat 27073699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 2862920 - 2862852
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||| |||||||||||||||||||||||||||||||| || ||| || | |||||||||||||||||||    
T  2862920 actatgtgagctctctatttatagagaaaattcacaaatagtatgtgtgcaactttgggaacaagtaat 2862852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 26981246 - 26981306
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagt 71  Q
    |||||||||||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  26981246 gtgagctctctatttataaagaaatttcacaactaataggtgagaaactttgggaacaagt 26981306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 16625067 - 16625130
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||||||||||||||    
T  16625067 gtgagttctctatttatagagataatttacaactaataagtgagaaactttgggaacaagtaat 16625130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 476
Target Start/End: Complemental strand, 2759337 - 2759142
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacc-cccttagaggtacactcccacaatataa--actactaatgtg--tgttccattcggt 378  Q
    ||||||| | ||||||||||||||||||| |||||||| ||| |  |||||||| ||| ||||  ||||||  ||||||||||||  ||||||||||| |    
T  2759337 attttttatatagtgcttacttcgttcacataattatgtacctctattagaggtgcacccccattatataaatactactaatgtgtatgttccattcgat 2759238  T
Q  379 gtgggatttatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    |||||| ||  ||        |||||||||| ||||||||| || |||||||| ||| ||||||| | ||||| |||||||||| |||  ||||||||    
T  2759237 gtgggactttcac--atttttcaattcacactacactagttttatccaacatagaaaattgtgtttaatcttttaactcaattttcacgcatgttcca 2759142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14073787 - 14073849
Alignment:
Q  13 tgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||| ||||    
T  14073787 tgagctctctatttatagagaaatttcacaactaatagatgagaaactttggggacaaataat 14073849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 28963951 - 28963865
Alignment:
Q  285 ttttttctgtagtgcttacttcgttcacttaattatgcacccc--cttagaggtacactcccacaatataa--actactaatgtgtg 367  Q
    |||||||| ||||||||||||||||| |||||||||| |||||  ||||||||||||| |||   ||||||  ||||||||||||||    
T  28963951 ttttttctttagtgcttacttcgttctcttaattatgtaccccctcttagaggtacacccccgatatataaacactactaatgtgtg 28963865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 6112202 - 6112139
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||| ||||| ||| |||||||| | ||||||||||||||| ||||||||    
T  6112202 gtgagctctctatttatatagaaagttcccaactaataagtgagaaactttgggagcaagtaat 6112139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 18387583 - 18387646
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||| ||||| ||||||| |||||  |||||||||||||| |||||||||    
T  18387583 gtgagctctctatttatacagaaacttcacaattaataggtgagaaactttggggacaagtaat 18387646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 24588621 - 24588566
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaa 66  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||    
T  24588621 gtgagctctctatttatagagaaaattcaaaactaataagtgagaacctttgggaa 24588566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 31477147 - 31477084
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  31477147 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 31477084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 15509414 - 15509490
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    ||||||||| || ||||||||||| ||||| | ||||||||||| ||||||| |||| ||||| |||  ||||||||    
T  15509414 caattcacataatactagttctactcaacagagaaatttgtgtttagtcttttaacttaattttcacatatgttcca 15509490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 14322845 - 14322790
Alignment:
Q  20 tctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  14322845 tctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 14322790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 15704354 - 15704291
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  15704354 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 15704291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 27324504 - 27324441
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  27324504 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 27324441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 2862610 - 2862564
Alignment:
Q  294 tagtgcttacttcgttcacttaattatgcacccccttagaggtacac 340  Q
    |||||||||||| |||||| |||||||| ||||| ||||||||||||    
T  2862610 tagtgcttactttgttcacataattatgtacccctttagaggtacac 2862564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 2881913 - 2881867
Alignment:
Q  294 tagtgcttacttcgttcacttaattatgcacccccttagaggtacac 340  Q
    |||||||||||| |||||| |||||||| ||||| ||||||||||||    
T  2881913 tagtgcttactttgttcacataattatgtacccctttagaggtacac 2881867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 328
Target Start/End: Complemental strand, 6111805 - 6111771
Alignment:
Q  294 tagtgcttacttcgttcacttaattatgcaccccc 328  Q
    |||||||||||||||||||||||||||| ||||||    
T  6111805 tagtgcttacttcgttcacttaattatgtaccccc 6111771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 9751221 - 9751175
Alignment:
Q  18 tctctatttatagagaaaattcacaactaatat-tgagaaactttgg 63  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||    
T  9751221 tctctatttatatagaaaattcacaactaatatatgtgaaactttgg 9751175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 15645349 - 15645387
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat 50  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  15645349 gtgagctctctatttatatagaaaattcgcaactaatat 15645387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 15640961 - 15640998
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata 49  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  15640961 gtgagctcactatttatagagagaattcacaactaata 15640998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 368
Target Start/End: Original strand, 15645696 - 15645772
Alignment:
Q  294 tagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataa--actactaatgtgtgt 368  Q
    ||||||||||||||||||| |||||||| | || ||||||||| ||| | ||| ||||||  || ||||||||||||    
T  15645696 tagtgcttacttcgttcacataattatgtagccgcttagaggtgcaccctcactatataaataccactaatgtgtgt 15645772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 2882223 - 2882155
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||| |||||||||  ||||||||||||||||||||| || ||| || | || ||||||||||||||||    
T  2882223 actatgtgagctctgaatttatagagaaaattcacaaatagtatgtgtgcaaatttgggaacaagtaat 2882155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 16761033 - 16761097
Alignment:
Q  12 gtgagctctctatttatag-agaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||| ||||||||||||| ||| |||| ||||||||||  ||||||||||||| ||||||||||    
T  16761033 gtgagttctctatttataggagataatttacaactaataagtgagaaactttggaaacaagtaat 16761097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 22845047 - 22845116
Alignment:
Q  6 cactacgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  22845047 cactatgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaat 22845116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 25375543 - 25375603
Alignment:
Q  15 agctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25375543 agctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaat 25375603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 6856848 - 6856911
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  6856848 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 6856911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 476
Target Start/End: Complemental strand, 10159791 - 10159604
Alignment:
Q  289 ttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac--tactaatgtgtgttccattcggtgtgggatt 386  Q
    |||| ||||||||||||||| ||| ||| |||| ||| | |||||||||||| ||||| ||||||||  ||||||| |||||||||| || ||||||| |    
T  10159791 ttctctagtgcttacttcgtccacataactatgtacctc-ttagaggtacacccccactatataaacactactaatatgtgttccatccgatgtgggact 10159693  T
Q  387 tatacnnnnnnnncaattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    |  ||        ||||||||||||||||||||||||| |||||   |||||||||| |||| ||| ||||||||||||||  ||||||||    
T  10159692 tccactttttt--caattcacacaacactagttctacctaacatgggaatttgtgtttagtctttttaactcaatttccacagatgttcca 10159604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 355
Target Start/End: Original strand, 17328436 - 17328507
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaac 355  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||| |||| |||| ||||| ||||||||    
T  17328436 attttttatttagtgcttactttgttcacttaattatgcacccccttggaggaacacacccactatataaac 17328507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26897278 - 26897341
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  26897278 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 26897341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 30635457 - 30635544
Alignment:
Q  22 tatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaatactttattttgagattaagtaattcacatgttag 108  Q
    |||||||| |||||||||||||||||||  |||||||||| ||||||||||||||| |||  |||| ||||| |||||||||| ||||    
T  30635457 tatttataaagaaaattcacaactaataagtgagaaacttggggaacaagtaatacattacattgacattaaataattcacatattag 30635544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 34070070 - 34070133
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  34070070 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 34070133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 17327711 - 17327773
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaa 73  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||    
T  17327711 gtgagctctctatttatagagaaaatttacaactaataagtgagaaattttgggaacaagtaa 17327773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24292905 - 24292842
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||    
T  24292905 gtgagccctctatttatagagaaacttcacaactaaaaggtgagaaactttgggaacaagtaat 24292842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 7559794 - 7559757
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7559794 gtgagctctctatttatagagaaaattcacaactaata 7559757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 1284165 - 1284228
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  1284165 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 1284228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 10160163 - 10160100
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||| |||||||| |||||||||||| | |||||||||||||||  |||||||    
T  10160163 gtgagctctctatttgtagagaaagttcacaactaataagtgagaaactttgggagtaagtaat 10160100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24286337 - 24286274
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| ||||||||||| |  |||||| |||||||||||||||||    
T  24286337 gtgagccctctatttatagagaaacttcacaactaaaaggtgagaagctttgggaacaagtaat 24286274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 30659159 - 30659259
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataa--actactaatgtgtgttccattcggtgtg 381  Q
    ||||||||| ||||||||||||||||||  ||| |||| | || ||||||||||||| ||||| ||||||  ||||||||||| |||||||| || ||||    
T  30659159 attttttctctagtgcttacttcgttcaaataactatgta-cctcttagaggtacacccccactatataaacactactaatgt-tgttccatccgatgtg 30659256  T
Q  382 gga 384  Q
    |||    
T  30659257 gga 30659259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 17453039 - 17452966
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaat------attgagaaactttgggaacaagtaat 74  Q
    |||| ||||| ||||||||||||||||||||| |||||||||      | ||||||||||||||||||||||||    
T  17453039 actatgtgagatctctatttatagagaaaatttacaactaatctaataagtgagaaactttgggaacaagtaat 17452966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 30635789 - 30635835
Alignment:
Q  294 tagtgcttacttcgttcacttaattatgcacccccttagaggtacac 340  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  30635789 tagtgcatacttggttcacttaattatgcacctccttagaggtacac 30635835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 30641545 - 30641491
Alignment:
Q  21 ctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||| || |||||||||| ||||||||||| ||||||||||||    
T  30641545 ctatttatagagaaaaatctcaactaatatgtgagaaacttttggaacaagtaat 30641491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 30658828 - 30658882
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttggga 65  Q
    ||||||||||||||||| |||||| |||||||||||| | |||||||||||||||    
T  30658828 gtgagctctctatttatggagaaagttcacaactaataagtgagaaactttggga 30658882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 30659288 - 30659365
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||||||||   | ||| |||| |||| ||| ||||||||||||||  ||||||||    
T  30659288 caattcacacaacactagttctacccaacatgggagtttttgtttagtctttttaactcaatttccacacatgttcca 30659365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 377733 - 377670
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||| ||| ||||||||||| |  ||||||||||| || |||||||||    
T  377733 gtgagctctctatttatagaaaaacttcacaactaaaaggtgagaaactttagggacaagtaat 377670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 28855782 - 28855844
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||| | ||||||||||||||| | ||||||||||||| | ||||||||    
T  28855782 gtgagctctctatttatag-ggaaattcacaactaataaatgagaaactttggaagcaagtaat 28855844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 42248878 - 42248941
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||  ||||||||  ||||||||||||| ||||||||||    
T  42248878 gtgagccctctatttatagagaaacttccgaactaataggtgagaaactttggaaacaagtaat 42248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 3238871 - 3238841
Alignment:
Q  20 tctatttatagagaaaattcacaactaatat 50  Q
    |||||||||||||||||||||||||||||||    
T  3238871 tctatttatagagaaaattcacaactaatat 3238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 30637188 - 30637230
Alignment:
Q  313 ttaattatgcacccccttagaggtacactcccacaatataaac 355  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||    
T  30637188 ttaattatgcacctccttagaggtacacccccactatataaac 30637230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 13291012 - 13290943
Alignment:
Q  7 actacgtgagctctctattta-tagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||| |||| | |||||| |||||||||||||||| ||||||  ||||||||||||||||    
T  13291012 actatgtgagctctatattaaatagagataattcacaactaatatgtgagaatttttgggaacaagtaat 13290943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 15799216 - 15799127
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataaactactaatgtgtgttccat 373  Q
    |||||||||  |||||||||||| |||| ||||||||||||||||||| |||||||| |||| | || | ||||||||||||||||||||    
T  15799216 attttttcttcagtgcttacttcattcatttaattatgcacccccttataggtacacccccatactaaacactactaatgtgtgttccat 15799127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 13520948 - 13520872
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||||||||   |||||||||| ||||||| ||||||||||||||  ||||||||    
T  13520948 caattcacacaacactagttctacccaacatgggaatttgtgtttagtcttttaactcaatttccacacatgttcca 13520872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 14899059 - 14898996
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  14899059 gtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaacaagtaat 14898996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 15225816 - 15225879
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  15225816 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 15225879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26034839 - 26034902
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  26034839 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 26034902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 34561069 - 34561138
Alignment:
Q  6 cactacgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  34561069 cactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 34561138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3997505 - 3997442
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  3997505 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 3997442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 7902554 - 7902491
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  7902554 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 7902491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9185127 - 9185064
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||    
T  9185127 gtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttgggaacaagtaat 9185064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9190992 - 9190929
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||    
T  9190992 gtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttgggaacaagtaat 9190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 14868511 - 14868448
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||    
T  14868511 gtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaagaagtaat 14868448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 14877423 - 14877486
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||    
T  14877423 gtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaagaagtaat 14877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 26188117 - 26188048
Alignment:
Q  6 cactacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||||| |||||||||||| ||  |||||||||||||||| ||||||||||| ||||||||||||    
T  26188117 cactacgtgagttctctatttatatagttaattcacaactaatatgtgagaaactttaggaacaagtaat 26188048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 3992852 - 3992745
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccattcg 376  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||     |||||||||||| ||||| ||||||  |||||||||||||| ||||| ||    
T  3992852 atttttcctctagtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactactaatgtgtgatccatccg 3992753  T
Q  377 gtgtggga 384  Q
     |||||||    
T  3992752 atgtggga 3992745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 55073792 - 55073856
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaag 70  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||||| | ||||||    
T  55073792 actacgtgagatctctatttatagagaaaattcacaactaatatatgtgaaactttagaaacaag 55073856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 13521428 - 13521365
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||||||||||| ||||||||    
T  13521428 gtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 13521365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 462
Target Start/End: Original strand, 55074447 - 55074508
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaattt 462  Q
    ||||||||||||||||| ||||||| || ||||||||||||||| ||||||| ||||||||||    
T  55074447 caattcacacaacactaattctaccaaatataaaaatttgtgtttagtcttt-aactcaattt 55074508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 31297488 - 31297411
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtc-tttgaactcaatttccactaatgttcca 476  Q
    ||||||||||||||||||||||||||||||| | |||||||||| || | |||  |||||||||||||  ||||||||    
T  31297488 caattcacacaacactagttctacccaacatgagaatttgtgtttagccttttttactcaatttccacgcatgttcca 31297411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 34561418 - 34561514
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccat 373  Q
    ||||||||| ||||||||||||| ||||| |||||||| ||||||     |||||||||||| ||||| ||||||  |||||||||||||| |||||    
T  34561418 attttttctctagtgcttacttcattcacataattatgtacccccattaattagaggtacacccccactatataaatactactaatgtgtgatccat 34561514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 26187888 - 26187809
Alignment:
Q  296 gtgcttacttcgttcacttaattatgcacccccttagaggtacactcccacaatataa--actactaatgtgtgttccat 373  Q
    |||||||||||||||||||||||||||| ||| || ||||||||  ||||| ||||||  ||||||| |||||| |||||    
T  26187888 gtgcttacttcgttcacttaattatgcatcccatttgaggtacaaccccactatataaatactactagtgtgtgatccat 26187809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 41817802 - 41817901
Alignment:
Q  286 tttttctgtagtgcttacttcgttcacttaattatgcacccc-cttagaggtacactcccacaatataa--actactaatgtgtgttccattcggtgtgg 382  Q
    ||||||| ||||||||||||||||||| |||||||| |||||  |||||| ||||| ||||| ||||||  ||||||||| |||| ||||| || |||||    
T  41817802 tttttctctagtgcttacttcgttcacataattatgtacccctattagagatacacccccactatataaacactactaatatgtgatccatccgatgtgg 41817901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 12488449 - 12488512
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  12488449 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 12488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 32545529 - 32545572
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat 50  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  32545529 actatgtgagctctctatttatagagaaaattcgcaactaatat 32545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 31297938 - 31297884
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttggga 65  Q
    |||||||||||||||||||||| | |||||||||||| | |||||||||||||||    
T  31297938 gtgagctctctatttatagagagagttcacaactaataagtgagaaactttggga 31297884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 39320213 - 39320274
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaa 73  Q
    ||||||||||||||||||| |||| |||||||||||| | ||||||| |||||||||||||||    
T  39320213 gtgagctctctatttatagtgaaagttcacaactaataagtgagaaa-tttgggaacaagtaa 39320274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 52742672 - 52742630
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaata 49  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  52742672 actatgtgagctctctatttatagagaaaattgacaactaata 52742630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 47575313 - 47575350
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata 49  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  47575313 gtgagctctctttttatagagaaaattcacaactaata 47575350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 1150797 - 1150742
Alignment:
Q  17 ctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagt 71  Q
    ||||||||||||||||||||||||||| || | | ||||| |||||||||||||||    
T  1150797 ctctctatttatagagaaaattcacaagtactttgtgagacactttgggaacaagt 1150742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 8660846 - 8660783
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||| ||||||||||||| |||||| | |||  |||||||||||||| ||||    
T  8660846 gtgagctctctatttacagagaaaattcactactaataagtgaagaactttgggaacaaataat 8660783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 10713591 - 10713654
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| ||||||||||||||||  ||| ||||||||| | ||||||||||||| ||||||||||    
T  10713591 gtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaaacaagtaat 10713654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 10927361 - 10927424
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| ||||||||||||||||  ||| ||||||||| | ||||||||||||| ||||||||||    
T  10927361 gtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaaacaagtaat 10927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 15011259 - 15011196
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  15011259 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 15011196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 7902191 - 7902155
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattat 320  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  7902191 attttttctctagtgcttacttcgttcacataattat 7902155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 39320701 - 39320765
Alignment:
Q  412 cactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||   ||||||| || | ||||| ||||||||||||||  ||||||||    
T  39320701 cactagttctacccaacatgcgaatttgtatttaatcttttaactcaatttccacacatgttcca 39320765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 14804154 - 14804218
Alignment:
Q  11 cgtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  14804154 cgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 14804218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 13893967 - 13894030
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13893967 gtgaactctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaat 13894030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 14819623 - 14819686
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  14819623 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 14819686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 17213887 - 17213824
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  17213887 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggaacaagtaat 17213824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 22428639 - 22428576
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  22428639 gtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaagtaat 22428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 40232831 - 40232768
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  40232831 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 40232768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 41097401 - 41097338
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  41097401 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 41097338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 52100664 - 52100602
Alignment:
Q  13 tgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  52100664 tgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 52100602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 3095220 - 3095297
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtct-ttgaactcaatttccactaatgttcca 476  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||| | || ||||||||||||||  ||||||||    
T  3095220 caattcacacaacactagttctacccaacatggaaatttgtgtttagtttgtttaactcaatttccacacatgttcca 3095297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 1067132 - 1067195
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||| |||||    
T  1067132 gtgagttctctatttatagagaaaattcacaactaataagtgagaaactttaggaacacgtaat 1067195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3094740 - 3094803
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  3094740 gtgaactctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 3094803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 21498302 - 21498365
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||    
T  21498302 gtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaat 21498365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 23285274 - 23285219
Alignment:
Q  20 tctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  23285274 tctatttatagagaaaattcacaattaatatgtgagaacctttgggaacaagtaat 23285219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 17213108 - 17213028
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttccatcag 480  Q
    |||||||||||||||| |||||||| || ||| ||||||||||  | ||||| |||||||||| |||  ||||||||||||    
T  17213108 caattcacacaacacttgttctacctaagatagaaatttgtgtctaatcttttaactcaattttcacacatgttccatcag 17213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 27308336 - 27308268
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||  ||||||||||| |||||| ||||    
T  27308336 actatgtgagcactctatttatagagaaaattcactactaatataagagaaactttgagaacaaataat 27308268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 2367694 - 2367757
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||  || ||| ||||||  ||||||||||||||||||||||||    
T  2367694 gtgagctctctatttatagagaagctttacagctaataggtgagaaactttgggaacaagtaat 2367757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 14204528 - 14204485
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgtt 443  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  14204528 caattcacacaacactagttccacccaacataagaatttgtgtt 14204485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26199009 - 26199072
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||| |||| |  ||| ||||||||||||||||||||    
T  26199009 gtgagctctctatttatagagaaacttcacagctaaaaggtgaaaaactttgggaacaagtaat 26199072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 39243466 - 39243403
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  39243466 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 39243403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 39247021 - 39246958
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  39247021 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 39246958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 41387418 - 41387355
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  41387418 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 41387355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 8267292 - 8267232
Alignment:
Q  15 agctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||||| |||||||||||| | ||| |||||||| || ||||||||    
T  8267292 agctctctatttatagagaaagttcacaactaataagtgataaactttgtgagcaagtaat 8267232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19725347 - 19725286
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||| |||||||||||||||||||  ||||||||||||  ||||||||||||||| ||||||||    
T  19725347 gtgaactctctatttatagagaaa--tcacaactaataaatgagaaactttgggagcaagtaat 19725286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 2384689 - 2384626
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||  || | | ||||||  ||||||||||||||||||||||||    
T  2384689 gtgagctctctatttatagagaagctttagagctaataggtgagaaactttgggaacaagtaat 2384626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 16836729 - 16836698
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaa 43  Q
    ||||||||||||||||||||||||||||||||    
T  16836729 gtgagctctctatttatagagaaaattcacaa 16836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 16633522 - 16633468
Alignment:
Q  20 tctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaa 73  Q
    |||||||||| |||||||||||||||||| | || |||||||||| |||||||||    
T  16633522 tctatttataaagaaaattcacaactaatctatgtgaaactttggaaacaagtaa 16633468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 40232472 - 40232364
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actact-aatgtgtgttccattc 375  Q
    |||| |||| ||||||||||||||||||| |||||||| ||||||     ||| |||||||| ||||| ||||||  |||||| |||||||| ||||| |    
T  40232472 atttcttctctagtgcttacttcgttcacataattatgtacccccattaattacaggtacacccccactatataaacactactaaatgtgtgatccatcc 40232373  T
Q  376 ggtgtggga 384  Q
    | |||||||    
T  40232372 gatgtggga 40232364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 17213635 - 17213580
Alignment:
Q  233 gttccaaaatattttactaaaacttggga--aagaaaacacattctaataatgatt 286  Q
    ||||||||||||||||  ||||||| |||  |||||||||| ||||||||||||||    
T  17213635 gttccaaaatattttagcaaaacttaggattaagaaaacactttctaataatgatt 17213580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 33055687 - 33055723
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat 48  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  33055687 gtgaactctctatttatagagaaagttcacaactaat 33055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 41097038 - 41097002
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattat 320  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  41097038 attttttctctagtgcttacttcgttcacataattat 41097002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24739 - 24676
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  24739 gtgagctctctatttatagagaaatttcacaactaataagtgagaaactttgggaacaagtaat 24676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 30335 - 30398
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  30335 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 30398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 517 - 580
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||    
T  517 gtgagctctctatttatagagaaacttcacaactaataggtgagaaactttggggacaagtaat 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3790 - 3727
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||    
T  3790 gtgagctctctatttatagagaaacttcacaactaataggtgagaaactttaggaacaagtaat 3727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19665 - 19602
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  19665 gtgagctctctatttatagagaaacttcacaactaataagtgagaaactttaggaacaagtaat 19602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 30918 - 30981
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||||||||||    
T  30918 gtgagctctctatttatagagaaatttcacaactaataagtgagaaactttggaaacaagtaat 30981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 59077 - 59140
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  59077 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagtaat 59140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 59419 - 59529
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataaac--tactaatgtgtgttccattcg 376  Q
    ||||| ||||||||||||||||| ||||| |||||||| ||||||     |||||||||||| ||||| ||||||||  |||||||||||| ||||| ||    
T  59419 attttctctgtagtgcttacttcattcacataattatgtacccccattaattagaggtacacccccactatataaacattactaatgtgtgatccatccg 59518  T
Q  377 gtgtgggattt 387  Q
     ||||||||||    
T  59519 atgtgggattt 59529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 63621 - 63731
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataaac--tactaatgtgtgttccattcg 376  Q
    ||||| ||||||||||||||||| ||||| |||||||| ||||||     |||||||||||| ||||| ||||||||  |||||||||||| ||||| ||    
T  63621 attttctctgtagtgcttacttcattcacataattatgtacccccattaattagaggtacacccccactatataaacattactaatgtgtgatccatccg 63720  T
Q  377 gtgtgggattt 387  Q
     ||||||||||    
T  63721 atgtgggattt 63731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 63284 - 63342
Alignment:
Q  17 ctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  63284 ctctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagtaat 63342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 47416 - 47353
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  47416 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 47353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 52360 - 52297
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  52360 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 52297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 51994 - 51899
Alignment:
Q  285 ttttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccat 373  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||     |||||||||||| || || ||||||  |||||||||||||| |||||    
T  51994 ttttttctctagtgcttacttcgttcacataattatgtacccccattaattagaggtacacccctactatataaacactactaatgtgtgatccat 51899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 84040 - 84091
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtcttt 451  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  84040 caattcacacaacactagttctacccaacatagaaatttgtgtttagtcttt 84091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 328
Target Start/End: Original strand, 83929 - 83961
Alignment:
Q  296 gtgcttacttcgttcacttaattatgcaccccc 328  Q
    |||||||||||||||||||||||||| ||||||    
T  83929 gtgcttacttcgttcacttaattatgtaccccc 83961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 193710 - 193647
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  193710 gtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 193647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 64811 - 64876
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaatac 76  Q
    |||||| ||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||    
T  64811 gtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaatac 64876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 81209 - 81274
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaatac 76  Q
    |||||| ||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||    
T  81209 gtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaatac 81274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 5798 - 5874
Alignment:
Q  400 caattcacacaacactagttctacccaacataaaaatttgtgttcagtctttgaactcaatttccactaatgttcca 476  Q
    ||||||||||||||||||||||||| || || | |||||||||| ||| ||| ||||||||||||||  ||||||||    
T  5798 caattcacacaacactagttctaccaaatatgagaatttgtgtttagtattttaactcaatttccacacatgttcca 5874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 7449 - 7519
Alignment:
Q  286 tttttctgtagtgcttacttcgttcacttaattatgcacccc-cttagaggtacactcccacaatataaac 355  Q
    ||||||| ||||||||||||||||||| |||||||| |||||  |||||||||||  ||||| ||||||||    
T  7449 tttttctatagtgcttacttcgttcacataattatgtacccctgttagaggtacaaccccacgatataaac 7519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 34804 - 34697
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc-----ttagaggtacactcccacaatataa--actactaatgtgtgttccattcg 376  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||     |||||||||||| ||||| ||||||  |||| ||||||||| ||||| ||    
T  34804 attttttctctagtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactattaatgtgtgatccatacg 34705  T
Q  377 gtgtggga 384  Q
     |||||||    
T  34704 atgtggga 34697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 35147 - 35084
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||| || |||||||| ||||||||    
T  35147 gtgagctctctatttatagagaaagttcacaactaataagtgacaagctttgggagcaagtaat 35084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0932 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 1087 - 1020
Alignment:
Q  7 actacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaa 73  Q
    ||||||||| ||  |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  1087 actacgtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaa 1020  T

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Target: scaffold0061 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 49427 - 49364
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  49427 gtgagttctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 49364  T

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Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 49043 - 49007
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattat 320  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  49043 attttttctctagtgcttacttcgttcacataattat 49007  T

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Target: scaffold0017 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 149207 - 149270
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  149207 gtgagttctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaat 149270  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 149591 - 149627
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattat 320  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  149591 attttttctctagtgcttacttcgttcacataattat 149627  T

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Target: scaffold0478 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 8247 - 8301
Alignment:
Q  21 ctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  8247 ctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaat 8301  T

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Target: scaffold0572 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 10419 - 10356
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  10419 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 10356  T

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Target: scaffold0229 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 10869 - 10806
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  10869 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 10806  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 32028 - 31965
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  32028 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 31965  T

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Target: scaffold0144 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 7528 - 7591
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  7528 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 7591  T

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Target: scaffold0141 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 13455 - 13392
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  13455 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 13392  T

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Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 21429 - 21366
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  21429 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 21366  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 121217 - 121280
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||||    
T  121217 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 121280  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 199841 - 199904
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaata-ttgagaaactttgggaacaagtaat 74  Q
    |||||||||||||||||||||||| ||| |||||||||  |||||||| ||||| |||||||||    
T  199841 gtgagctctctatttatagagaaacttcgcaactaataggtgagaaacattggggacaagtaat 199904  T

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Target: scaffold0720 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 5985 - 5931
Alignment:
Q  21 ctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat 74  Q
    ||||||||||||||||  |||||||||||| ||||||||||| ||||||||||||    
T  5985 ctatttatagagaaaaagcacaactaatatgtgagaaactttcggaacaagtaat 5931  T

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Target: scaffold0452 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 12411 - 12348
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  12411 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 12348  T

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Target: scaffold0431 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 14920 - 14857
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||| |||||||||||||||| | || ||||||||| | ||||||||||||| ||||||||||    
T  14920 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 14857  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 341 - 298
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcacccc 327  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||    
T  341 attttttctctagtgcttacttcgttcacataattatgtacccc 298  T

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Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 683 - 620
Alignment:
Q  12 gtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 74  Q
    ||||||||||||| | |||||||| |||| ||||||| | ||||||||||||||| ||||||||    
T  683 gtgagctctctatatgtagagaaagttcataactaataagtgagaaactttgggagcaagtaat 620  T

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Target: scaffold0484 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 7926 - 7970
Alignment:
Q  284 attttttctgtagtgcttacttcgttcacttaattatgcaccccc 328  Q
    ||||||||| | ||||||||||||||||| |||||||| ||||||    
T  7926 attttttctcttgtgcttacttcgttcacataattatgtaccccc 7970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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